Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,918,923	C→T	T400T (ACG→ACA)	b2789 ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,918,923	0	C	T	91.2%	1022.1 / 49.0	340	T400T (ACG→ACA)	b2789	putative transport protein
Reads supporting (aligned to +/- strand): ref base C (16/14); new base T (145/165); total (161/179)
Fisher's exact test for biased strand distribution p-value = 5.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01

Only 100 of 349 total aligned reads displayed.

CAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTGCCC  >  NC_000913/2918833‑2919014

  gTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGa                                                                                         <  2:8583473/93‑1 (MQ=255)

   tACCGCGATTAAGGCATGAACACCAACAAAAATCAGCTCCCCATTAAACGATCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGAc                                                                                        <  2:7062572/93‑1 (MQ=255)

    aCCGTGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACg                                                                                       >  1:5175143/1‑93 (MQ=255)

    aCCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACg                                                                                       <  2:4935394/93‑1 (MQ=255)

     ccGCGATTAAGGTATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGa                                                                                      <  2:9102144/93‑1 (MQ=255)

     ccGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGa                                                                                      <  1:7475594/93‑1 (MQ=255)

     ccGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGa                                                                                      >  2:2987098/1‑93 (MQ=255)

     ccGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGa                                                                                      <  1:4334147/93‑1 (MQ=255)

      cgcgATTAGGGCAGGACCGCCAACATAATTAAGCGCCCCATTAGACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAt                                                                                     <  1:1059724/93‑1 (MQ=255)

      cgcgATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAt                                                                                     >  2:3948004/1‑93 (MQ=255)

      cgcgATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAt                                                                                     >  1:2457226/1‑93 (MQ=255)

        cgATTAAGGCATGAACCCCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGc                                                                                   <  1:7239398/93‑1 (MQ=255)

         gATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGcc                                                                                  >  1:8839466/1‑93 (MQ=255)

          aTTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCa                                                                                 >  1:2824684/1‑93 (MQ=255)

          aTTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCa                                                                                 >  1:329925/1‑93 (MQ=255)

          aTTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCa                                                                                 >  1:9902320/1‑93 (MQ=255)

          aTTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCAAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCa                                                                                 >  1:8775141/1‑93 (MQ=255)

           ttAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAg                                                                                <  2:8882883/93‑1 (MQ=255)

           ttAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAg                                                                                >  2:1631769/1‑93 (MQ=255)

            tAAGGAATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGa                                                                               <  1:7929904/93‑1 (MQ=255)

              aGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGaaa                                                                             >  2:8013395/1‑93 (MQ=255)

              aGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGaaa                                                                             <  2:5928565/93‑1 (MQ=255)

              aGGAATGAACACCAACAAAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGaaa                                                                             <  1:6863347/93‑1 (MQ=255)

               ggCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAAt                                                                            >  2:204233/1‑93 (MQ=255)

                 cATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGt                                                                          >  2:2452192/1‑93 (MQ=255)

                  aTGAACTCCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGtt                                                                         <  2:4593097/93‑1 (MQ=255)

                  aTGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGtt                                                                         >  2:874642/1‑93 (MQ=255)

                  aTGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGtt                                                                         <  1:2484235/93‑1 (MQ=255)

                   tGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTa                                                                        >  1:3635166/1‑93 (MQ=255)

                     aaCACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGGCGATGCCAGAAATGTTAcc                                                                      <  2:1090448/93‑1 (MQ=255)

                     aaCACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTAcc                                                                      <  2:7389939/93‑1 (MQ=255)

                     aaCACAAACATAAATCAGCGCCCCATTAAGCGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTAcc                                                                      <  2:1190558/93‑1 (MQ=255)

                       cacCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGa                                                                    <  2:6685158/93‑1 (MQ=255)

                       cacCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGa                                                                    >  2:5471876/1‑93 (MQ=255)

                        acCAACATAAATCAGCGCCCGATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGaa                                                                   <  2:722647/93‑1 (MQ=255)

                        acCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGaa                                                                   >  1:5414801/1‑93 (MQ=255)

                         ccAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTTCCAACGACATAACCAATTGCGATTTGTGTGACGATGCCAGAAATGATACCGAAc                                                                  >  2:4442986/1‑93 (MQ=255)

                          cAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACa                                                                 <  1:734061/93‑1 (MQ=255)

                          cAACATAAATCAGCGCCCAATAAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACa                                                                 <  2:2268539/93‑1 (MQ=255)

                          aaaCATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACa                                                                 <  1:6182608/92‑1 (MQ=255)

                           aaCATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACAt                                                                >  2:6517613/1‑93 (MQ=255)

                           aaCATAAACCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACAt                                                                <  1:8352434/93‑1 (MQ=255)

                            aCATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATg                                                               >  1:6146517/1‑93 (MQ=255)

                            aCATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATg                                                               >  1:9301091/1‑93 (MQ=255)

                            aCATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATg                                                               <  1:9639258/93‑1 (MQ=255)

                             cATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGt                                                              <  2:2748947/93‑1 (MQ=255)

                              aTAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGtt                                                             >  2:9894470/1‑93 (MQ=255)

                               tAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGtta                                                            >  2:9814338/1‑92 (MQ=255)

                                aaaTCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGa                                                           <  2:8302978/93‑1 (MQ=255)

                                aaaGCAGCGCCCCATAAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGa                                                           <  1:1115747/93‑1 (MQ=255)

                                   tCAGCCCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACa                                                        <  1:5337206/93‑1 (MQ=255)

                                    cAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTTGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAg                                                       <  2:3472736/93‑1 (MQ=255)

                                      gcgcCCCATTAAACGAGCCAGTCGTGCCAACGATATAGCCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGc                                                     <  2:6113886/93‑1 (MQ=255)

                                      gcgcCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGc                                                     <  2:4578138/93‑1 (MQ=255)

                                       cgcCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGcc                                                    <  2:4289395/93‑1 (MQ=255)

                                         ccccATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATTTTGAACAGGCCAc                                                  >  1:5902041/1‑93 (MQ=255)

                                              ttAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGaa                                             >  2:8665755/1‑93 (MQ=255)

                                              ttAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGaa                                             >  2:1444876/1‑93 (MQ=255)

                                               aaaaCGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGaaa                                            <  1:652391/92‑1 (MQ=255)

                                                  aCGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGTCCACCGGAAAGAc                                         >  1:5028506/1‑93 (MQ=255)

                                                  aCGAGACAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGAc                                         <  1:4842432/93‑1 (MQ=255)

                                                    gAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAGTGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCg                                       <  2:1346503/93‑1 (MQ=255)

                                                    gAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCg                                       <  2:2594505/93‑1 (MQ=255)

                                                      gCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCt                                     <  1:6428230/93‑1 (MQ=255)

                                                       ccAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTg                                    >  1:1259223/1‑93 (MQ=255)

                                                        cAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGa                                   <  1:4535987/93‑1 (MQ=255)

                                                        cAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGa                                   <  1:1649751/93‑1 (MQ=255)

                                                        cAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGa                                   >  2:9621868/1‑93 (MQ=255)

                                                           tCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGAtct                                >  1:4376515/1‑93 (MQ=255)

                                                           tCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGAtct                                >  2:8932584/1‑93 (MQ=255)

                                                           tCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGAtct                                >  1:8324976/1‑93 (MQ=255)

                                                             gTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATctct                              <  1:7525397/93‑1 (MQ=255)

                                                             gTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATctct                              <  2:5682554/93‑1 (MQ=255)

                                                               gCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCttt                            >  1:7120337/1‑93 (MQ=255)

                                                                ccAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCtttt                           >  1:1797961/1‑93 (MQ=255)

                                                                 cAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTg                          <  2:3610860/93‑1 (MQ=255)

                                                                  aaCGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTgg                         >  1:3001955/1‑93 (MQ=255)

                                                                  aaCGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTgg                         <  1:1502148/93‑1 (MQ=255)

                                                                  aaCGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTgg                         <  2:8512623/93‑1 (MQ=255)

                                                                  aaCGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTgg                         <  1:5965894/93‑1 (MQ=255)

                                                                    cGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGgcg                       >  2:7498412/1‑93 (MQ=255)

                                                                     gATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAAACCGCTGATCTCTTTTGgcgg                      >  1:7806912/1‑92 (MQ=255)

                                                                        ataACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGt                   >  2:9157104/1‑93 (MQ=255)

                                                                        ataACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGt                   >  1:863688/1‑93 (MQ=255)

                                                                        ataACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGt                   <  2:2710383/93‑1 (MQ=255)

                                                                         taACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTa                  >  1:2032120/1‑93 (MQ=255)

                                                                         taACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTa                  >  2:2867681/1‑93 (MQ=255)

                                                                          aaCCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTAt                 <  1:8900027/93‑1 (MQ=255)

                                                                          aaCCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTAt                 <  1:3863284/93‑1 (MQ=255)

                                                                           aCCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATc                >  1:55773/1‑93 (MQ=255)

                                                                            ccAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCt               <  2:7629762/93‑1 (MQ=255)

                                                                              aaTTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGGATCTGc             >  1:4694215/1‑93 (MQ=255)

                                                                                ttGCGATTGGTGTGACGATGACAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCa           >  2:8378263/1‑93 (MQ=255)

                                                                                 tGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCAt          <  2:231486/93‑1 (MQ=255)

                                                                                  gCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCAtt         <  2:180158/93‑1 (MQ=255)

                                                                                   cGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTa        <  2:7753775/93‑1 (MQ=255)

                                                                                    gATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTAc       <  1:3109819/93‑1 (MQ=255)

                                                                                    gATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTAc       <  1:9443634/93‑1 (MQ=255)

                                                                                      ttGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTg     >  2:5068404/1‑93 (MQ=255)

                                                                                      ttGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTg     >  2:943616/1‑93 (MQ=255)

CAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTGCCC  >  NC_000913/2918833‑2919014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTGCCCAA  >  NC_000913/2918830‑2919016

GCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGT                                                                                               <  SRR4302540.5872120/94‑1 (MQ=60)

GCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGT                                                                                               <  SRR4302540.9772261/94‑1 (MQ=60)

ACTCAGTACCGCGATTAAGGCATGAACACCAACATAATTCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGT                                                                                               <  SRR4302540.7437374/94‑1 (MQ=60)

 CTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGGGATTGGTG                                                                                              >  SRR4302540.5534605/1‑94 (MQ=60)

  TCAGTACCGCGATTAAGGTATGAACACAAACATAAATCAGCGCCCCATTAAATGATCCTGTAGTGCCCACGATATAACCAATTGGGATTGGCGG                                                                                             >  SRR4302540.7750829/1‑94 (MQ=60)

  TCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGT                                                                                             <  SRR4302540.84769/94‑1 (MQ=60)

   CAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTG                                                                                            >  SRR4302540.4771376/1‑94 (MQ=60)

    AGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGA                                                                                           <  SRR4302540.5431584/94‑1 (MQ=60)

     GTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGAC                                                                                          >  SRR4302540.3229663/1‑94 (MQ=60)

     GTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGAC                                                                                          <  SRR4302540.6913772/94‑1 (MQ=60)

      TACCGTGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACG                                                                                         >  SRR4302540.5231466/1‑94 (MQ=60)

      TACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACG                                                                                         <  SRR4302540.1304664/94‑1 (MQ=60)

       ACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGA                                                                                        >  SRR4302540.2494838/1‑94 (MQ=60)

       ACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGA                                                                                        >  SRR4302540.5998867/1‑94 (MQ=60)

        CCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAT                                                                                       <  SRR4302540.5162305/94‑1 (MQ=60)

        CCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAT                                                                                       <  SRR4302540.5651233/94‑1 (MQ=60)

        CCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAT                                                                                       <  SRR4302540.4381329/94‑1 (MQ=60)

        CCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAT                                                                                       >  SRR4302540.2483671/1‑94 (MQ=60)

        CCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAT                                                                                       <  SRR4302540.7559017/94‑1 (MQ=60)

        CCGCGATAAAGGCATGAACCCCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAT                                                                                       <  SRR4302540.751456/94‑1 (MQ=60)

        CCGAGATTAAGGCATGCACACCAACATAAATCAGCGCCCCAGTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAT                                                                                       <  SRR4302540.3138439/94‑1 (MQ=60)

         CGCGATTAGGGCAGGACCGCCAACATAATTAAGCGCCCCATTAGACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATG                                                                                      <  SRR4302540.1070511/94‑1 (MQ=60)

         CGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATG                                                                                      <  SRR4302540.2042651/94‑1 (MQ=60)

           CGATTAAGGCATGAACCCCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCC                                                                                    <  SRR4302540.7320142/94‑1 (MQ=60)

           CGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCC                                                                                    >  SRR4302540.8941708/1‑94 (MQ=60)

           CGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCC                                                                                    >  SRR4302540.7225838/1‑94 (MQ=60)

            GATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCA                                                                                   >  SRR4302540.2855205/1‑94 (MQ=60)

            GATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCA                                                                                   >  SRR4302540.333236/1‑94 (MQ=60)

            GATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCA                                                                                   >  SRR4302540.10018012/1‑94 (MQ=60)

            GATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCA                                                                                   >  SRR4302540.2056221/1‑94 (MQ=60)

            GATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCA                                                                                   >  SRR4302540.8945321/1‑94 (MQ=60)

            GATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCAAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCA                                                                                   >  SRR4302540.8876791/1‑94 (MQ=60)

             ATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAG                                                                                  >  SRR4302540.483255/1‑94 (MQ=60)

              TTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGA                                                                                 <  SRR4302540.6230555/94‑1 (MQ=60)

               TAATGCATGCACACCAACATAAATCGGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAA                                                                                <  SRR4302540.1090288/94‑1 (MQ=60)

               TAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAA                                                                                <  SRR4302540.1534114/94‑1 (MQ=60)

               TAAGGAATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAA                                                                                <  SRR4302540.8022332/94‑1 (MQ=60)

                AAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAA                                                                               <  SRR4302540.8916376/94‑1 (MQ=60)

                 AGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAAT                                                                              >  SRR4302540.2937724/1‑94 (MQ=60)

                 AGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAAT                                                                              <  SRR4302540.5291399/94‑1 (MQ=60)

                 AGGAATGAACACCAACAAAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAAT                                                                              <  SRR4302540.6939411/94‑1 (MQ=60)

                   GCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGT                                                                            <  SRR4302540.7598264/94‑1 (MQ=60)

                    CATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTT                                                                           >  SRR4302540.652804/1‑94 (MQ=60)

                    CAGGAACACCAACAAAAAACAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTT                                                                           <  SRR4302540.6217801/94‑1 (MQ=60)

                     ATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTA                                                                          <  SRR4302540.2511002/94‑1 (MQ=60)

                     ATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTA                                                                          >  SRR4302540.3674960/1‑94 (MQ=60)

                     ATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTA                                                                          <  SRR4302540.8447803/94‑1 (MQ=60)

                     ATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTA                                                                          <  SRR4302540.181830/94‑1 (MQ=60)

                      TGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTAC                                                                         >  SRR4302540.3760286/1‑94 (MQ=60)

                        AACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCG                                                                       >  SRR4302540.7526691/1‑94 (MQ=60)

                        AACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCG                                                                       >  SRR4302540.6432719/1‑94 (MQ=60)

                         ACACCAACATAAATCAGCGCCCCATTAAGCGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTAACGATGCCAGAAATGTTACCGA                                                                      <  SRR4302540.1775666/94‑1 (MQ=60)

                          CACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAA                                                                     >  SRR4302540.5474340/1‑94 (MQ=60)

                          CACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAA                                                                     >  SRR4302540.5474343/1‑94 (MQ=60)

                          CACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAA                                                                     <  SRR4302540.8128897/94‑1 (MQ=60)

                          CACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTCGTGTGACGATGCCAGAAATATTACCGAA                                                                     >  SRR4302540.8969290/1‑94 (MQ=60)

                           cccacCATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAAC                                                                    <  SRR4302540.7596245/89‑1 (MQ=60)

                           ACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAAC                                                                    >  SRR4302540.1006781/1‑94 (MQ=60)

                             CAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACAT                                                                  >  SRR4302540.3105350/1‑94 (MQ=60)

                             CAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACAT                                                                  <  SRR4302540.741911/94‑1 (MQ=60)

                             CAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACAT                                                                  <  SRR4302540.1802053/94‑1 (MQ=60)

                             AAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACAT                                                                  <  SRR4302540.6251470/94‑1 (MQ=60)

                              AACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATG                                                                 >  SRR4302540.6214976/1‑94 (MQ=60)

                              AACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATG                                                                 >  SRR4302540.9412188/1‑94 (MQ=60)

                              AACATAAACCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATG                                                                 <  SRR4302540.8449371/94‑1 (MQ=60)

                               ACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGT                                                                <  SRR4302540.9752811/94‑1 (MQ=60)

                                aaaAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTT                                                               <  SRR4302540.9821495/91‑1 (MQ=60)

                                CATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTT                                                               <  SRR4302540.6707434/94‑1 (MQ=60)

                                 ATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTG                                                              <  SRR4302540.6404027/94‑1 (MQ=60)

                                 ATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTG                                                              <  SRR4302540.6058013/94‑1 (MQ=60)

                                 ATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTG                                                              >  SRR4302540.1187162/1‑94 (MQ=60)

                                  AAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGA                                                             <  SRR4302540.7346306/94‑1 (MQ=60)

                                   AAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAA                                                            >  SRR4302540.145917/1‑94 (MQ=60)

                                   AAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAA                                                            <  SRR4302540.4367784/94‑1 (MQ=60)

                                   AAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAA                                                            <  SRR4302540.9167849/94‑1 (MQ=60)

                                   AAAGCAGCGCCCCATAAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAA                                                            <  SRR4302540.1127309/94‑1 (MQ=60)

                                    AATCAGCGCGCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAAC                                                           <  SRR4302540.7984659/94‑1 (MQ=60)

                                    AATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAAC                                                           <  SRR4302540.4409189/94‑1 (MQ=60)

                                    AATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAAC                                                           >  SRR4302540.6643986/1‑94 (MQ=60)

                                    AACCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAAC                                                           <  SRR4302540.5556179/94‑1 (MQ=60)

                                    AACCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAAC                                                           <  SRR4302540.110669/94‑1 (MQ=60)

                                     ATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACA                                                          >  SRR4302540.6059633/1‑94 (MQ=60)

                                      TCAGCCCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAG                                                         <  SRR4302540.5395715/94‑1 (MQ=60)

                                        AGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGC                                                       <  SRR4302540.8652207/94‑1 (MQ=60)

                                         GCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCC                                                      <  SRR4302540.4720971/94‑1 (MQ=60)

                                          CGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCA                                                     <  SRR4302540.7318281/94‑1 (MQ=60)

                                           GCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATTTTGAACAGGCCAC                                                    >  SRR4302540.5967217/1‑94 (MQ=60)

                                           GCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCAC                                                    <  SRR4302540.9699587/94‑1 (MQ=60)

                                           GCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGAGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGGCAC                                                    >  SRR4302540.5987778/1‑94 (MQ=60)

                                           CCCCCATAAAACGAGCCAGTCGCGCCAACGATATAACCAATTGCGATTGGTTTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCAC                                                    <  SRR4302540.9551447/94‑1 (MQ=60)

                                            CCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACC                                                   <  SRR4302540.1520860/94‑1 (MQ=60)

                                             CCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCG                                                  <  SRR4302540.3481066/94‑1 (MQ=60)

                                              CCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGG                                                 >  SRR4302540.7771151/1‑94 (MQ=60)

                                              CCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGA                                                 >  SRR4302540.7633501/1‑94 (MQ=60)

                                              CCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGAAGCCAGAAATGTTACCGAACACGTTGAAGAGGTCACCGA                                                 >  SRR4302540.6866587/1‑94 (MQ=60)

                                               CATAAAACAAGCCAGTCGTCCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCCGAAATGTTACCGTACATGTTGAACAGGCCACCGGC                                                <  SRR4302540.7777465/94‑1 (MQ=60)

                                                ATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGGCGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAA                                               >  SRR4302540.6593627/1‑94 (MQ=60)

                                                ATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAA                                               >  SRR4302540.7447350/1‑94 (MQ=60)

                                                ATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAA                                               <  SRR4302540.2539081/94‑1 (MQ=60)

                                                 TTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAA                                              >  SRR4302540.506017/1‑94 (MQ=60)

                                                  TAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAG                                             >  SRR4302540.1325488/1‑94 (MQ=60)

                                                  TAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAG                                             >  SRR4302540.498048/1‑94 (MQ=60)

                                                  TAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAG                                             <  SRR4302540.4303137/94‑1 (MQ=60)

                                                  AAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAG                                             <  SRR4302540.659331/94‑1 (MQ=60)

                                                    ACCGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGAC                                           <  SRR4302540.8939171/94‑1 (MQ=60)

                                                    AACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGTCCACCGGAAAGAC                                           >  SRR4302540.5082927/1‑94 (MQ=60)

                                                     ACGAGACAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACC                                          <  SRR4302540.4894294/94‑1 (MQ=60)

                                                      CGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCG                                         <  SRR4302540.7335710/94‑1 (MQ=60)

                                                       GAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGC                                        >  SRR4302540.7029388/1‑94 (MQ=60)

                                                        AGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCT                                       <  SRR4302540.7311084/94‑1 (MQ=60)

                                                        AGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCT                                       <  SRR4302540.8667605/94‑1 (MQ=60)

                                                         GCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTG                                      <  SRR4302540.6499777/94‑1 (MQ=60)

                                                         GCCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTG                                      >  SRR4302540.1272140/1‑94 (MQ=60)

                                                          CCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGA                                     >  SRR4302540.9306321/1‑94 (MQ=60)

                                                          CCAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGA                                     >  SRR4302540.5173402/1‑94 (MQ=60)

                                                           CAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGAT                                    <  SRR4302540.1667749/94‑1 (MQ=60)

                                                           CAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGAT                                    >  SRR4302540.5387410/1‑94 (MQ=60)

                                                           CAGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGAT                                    <  SRR4302540.4585087/94‑1 (MQ=60)

                                                            AGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATC                                   >  SRR4302540.5961076/1‑94 (MQ=60)

                                                            AGTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATC                                   <  SRR4302540.8449068/94‑1 (MQ=60)

                                                             GTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCT                                  <  SRR4302540.1808219/94‑1 (MQ=60)

                                                             GTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCT                                  >  SRR4302540.8330355/1‑94 (MQ=60)

                                                             GTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCT                                  >  SRR4302540.4424036/1‑94 (MQ=60)

                                                             GTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCT                                  >  SRR4302540.8421598/1‑94 (MQ=60)

                                                             GTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCT                                  >  SRR4302540.8801697/1‑94 (MQ=60)

                                                             GTCGTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCT                                  >  SRR4302540.4497449/1‑94 (MQ=60)

                                                               CGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCT                                >  SRR4302540.6108189/1‑94 (MQ=60)

                                                                GTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTT                               >  SRR4302540.2460267/1‑94 (MQ=60)

                                                                GTGCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTT                               <  SRR4302540.7609601/94‑1 (MQ=60)

                                                                GTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTT                               <  SRR4302540.698295/94‑1 (MQ=60)

                                                                 TGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTT                              >  SRR4302540.7199622/1‑94 (MQ=60)

                                                                  GCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTT                             >  SRR4302540.2500468/1‑94 (MQ=60)

                                                                  GCCAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTT                             >  SRR4302540.1817523/1‑94 (MQ=60)

                                                                    CAACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGG                           >  SRR4302540.3035019/1‑94 (MQ=60)

                                                                     AACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGC                          <  SRR4302540.1518700/94‑1 (MQ=60)

                                                                     AACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGC                          <  SRR4302540.6031906/94‑1 (MQ=60)

                                                                     AACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGC                          >  SRR4302540.3294812/1‑94 (MQ=60)

                                                                      ACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCG                         <  SRR4302540.9732633/94‑1 (MQ=60)

                                                                      ACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCG                         <  SRR4302540.9851941/94‑1 (MQ=60)

                                                                      ACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCG                         <  SRR4302540.4473194/94‑1 (MQ=60)

                                                                      ACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCG                         <  SRR4302540.4517807/94‑1 (MQ=60)

                                                                      ACGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCG                         <  SRR4302540.3140962/94‑1 (MQ=60)

                                                                       CGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGC                        >  SRR4302540.3346323/1‑94 (MQ=60)

                                                                       CGATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAAACCGCTGATCTCTTTTGGCGG                        >  SRR4302540.7898141/1‑94 (MQ=60)

                                                                        GATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCG                       >  SRR4302540.4636512/1‑94 (MQ=60)

                                                                        GATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCG                       >  SRR4302540.5738348/1‑94 (MQ=60)

                                                                        GATATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGCCCACCGGAAAGACCGCTGATCTCTTTTGGGGCG                       >  SRR4302540.4825269/1‑94 (MQ=60)

                                                                          TATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGT                     >  SRR4302540.8548037/1‑94 (MQ=60)

                                                                          TATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGT                     >  SRR4302540.872864/1‑94 (MQ=60)

                                                                           ATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTA                    >  SRR4302540.2054047/1‑94 (MQ=60)

                                                                           ATAACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGCTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTA                    >  SRR4302540.1176160/1‑94 (MQ=60)

                                                                             AACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATC                  >  SRR4302540.56331/1‑94 (MQ=60)

                                                                             AACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATC                  <  SRR4302540.3905278/94‑1 (MQ=60)

                                                                             AACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATC                  <  SRR4302540.9003057/94‑1 (MQ=60)

                                                                             AACCAATTGCAATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATC                  >  SRR4302540.3890071/1‑94 (MQ=60)

                                                                              ACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGACCAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCT                 <  SRR4302540.9567963/94‑1 (MQ=60)

                                                                              ACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCT                 <  SRR4302540.434013/94‑1 (MQ=60)

                                                                              ACCAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCT                 <  SRR4302540.252999/94‑1 (MQ=60)

                                                                                CAATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGGATCTGC               >  SRR4302540.4744398/1‑94 (MQ=60)

                                                                                 AATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCC              >  SRR4302540.217372/1‑94 (MQ=60)

                                                                                 AATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCC              >  SRR4302540.2959698/1‑94 (MQ=60)

                                                                                  ATTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCA             >  SRR4302540.2751506/1‑94 (MQ=60)

                                                                                   TTGCTATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCAT            <  SRR4302540.4407806/94‑1 (MQ=60)

                                                                                   TTGCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCAT            <  SRR4302540.8757672/94‑1 (MQ=60)

                                                                                     GCGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTA          >  SRR4302540.9237149/1‑94 (MQ=60)

                                                                                      CGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTAC         >  SRR4302540.5441463/1‑94 (MQ=60)

                                                                                      CGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTAC         <  SRR4302540.5202074/94‑1 (MQ=60)

                                                                                      CGATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTAC         <  SRR4302540.8880769/94‑1 (MQ=60)

                                                                                       GATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACT        <  SRR4302540.3143843/94‑1 (MQ=60)

                                                                                       GATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACT        <  SRR4302540.8376706/94‑1 (MQ=60)

                                                                                       GATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACT        <  SRR4302540.9555752/94‑1 (MQ=60)

                                                                                       GATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACT        <  SRR4302540.9555754/94‑1 (MQ=60)

                                                                                       GATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACT        <  SRR4302540.3590496/94‑1 (MQ=60)

                                                                                        ATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTG       >  SRR4302540.7982024/1‑94 (MQ=60)

                                                                                        ATTGGTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCAATTACTG       >  SRR4302540.5468067/1‑94 (MQ=60)

                                                                                        ATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTG       >  SRR4302540.6490875/1‑94 (MQ=60)

                                                                                          TGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTGCC     >  SRR4302540.7728828/1‑94 (MQ=60)

                                                                                            GTGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTGCCCA   >  SRR4302540.7602106/1‑94 (MQ=60)

                                                                                             TGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTGCCCAA  <  SRR4302540.9117723/94‑1 (MQ=60)

                                                                                             GGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTGCCCAA  <  SRR4302540.3422440/94‑1 (MQ=60)

GCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAATTGCGATTGGCGTGACGATGCCAGAAATGTTACCGAACATGTTGAACAGGCCACCGGAAAGACCGCTGATCTCTTTTGGCGCGGTATCTGCCATTACTGCCCAA  >  NC_000913/2918830‑2919016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`