Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,925,058	A→C	E243D (GAA→GAC)	ygdH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,925,058	0	A	C	99.7%	1111.5 / NA	346	E243D (GAA→GAC)	ygdH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (180/165); total (181/165)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 368 total aligned reads displayed.

TATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAAT  >  NC_000913/2924968‑2925147

tATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGc                                                                                         >  1:1042500/1‑93 (MQ=255)

tATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGc                                                                                         >  1:2560207/1‑93 (MQ=255)

 aTGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAcgcg                                                                                        <  1:1796887/93‑1 (MQ=255)

  tGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGt                                                                                       <  2:6064091/93‑1 (MQ=255)

   gACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGtt                                                                                      <  2:8314989/93‑1 (MQ=255)

   gACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGtt                                                                                      <  1:6138464/93‑1 (MQ=255)

       gagCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTc                                                                                  <  1:8870596/93‑1 (MQ=255)

       gagCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTc                                                                                  >  2:2946650/1‑93 (MQ=255)

        agCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTcc                                                                                 >  2:3859980/1‑93 (MQ=255)

         gCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCg                                                                                <  2:6639038/93‑1 (MQ=255)

         gCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCg                                                                                >  1:2266740/1‑93 (MQ=255)

          ccGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGt                                                                               >  1:1871124/1‑93 (MQ=255)

           cGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTa                                                                              <  1:1135401/93‑1 (MQ=255)

           cGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTa                                                                              <  2:2570223/93‑1 (MQ=255)

            gTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTAt                                                                             >  2:9435597/1‑93 (MQ=255)

             tCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATc                                                                            >  2:4261201/1‑93 (MQ=255)

             tCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATc                                                                            >  1:9761712/1‑93 (MQ=255)

             tCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATc                                                                            <  2:9256427/93‑1 (MQ=255)

             tCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATACCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATc                                                                            >  1:9966472/1‑93 (MQ=255)

               gATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGc                                                                          <  2:1937345/93‑1 (MQ=255)

               gATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGc                                                                          >  1:136751/1‑93 (MQ=255)

                aTTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCt                                                                         >  1:4505168/1‑93 (MQ=255)

                 ttATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTc                                                                        >  2:9165120/1‑93 (MQ=255)

                 ttATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTc                                                                        >  2:1968618/1‑93 (MQ=255)

                    tCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACg                                                                     >  1:3749437/1‑93 (MQ=255)

                    tCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACg                                                                     <  2:5152545/93‑1 (MQ=255)

                    tCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACg                                                                     >  1:3324514/1‑93 (MQ=255)

                      gccgcTGCCCCGCCTAACCCGCTGGTCAACGAAGTGGTCATCATGCCAGATGCCGAAAGGCGTCTGGACGCGTTTGTCCGTATCGCTCACGGt                                                                   <  2:4973347/93‑1 (MQ=255)

                       ccgcTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTa                                                                  <  1:8157087/93‑1 (MQ=255)

                         gcTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATc                                                                <  1:7870002/93‑1 (MQ=255)

                         gcTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATc                                                                >  1:3718008/1‑93 (MQ=255)

                         ccTGAACCCCCTACCCCGCTGGACAACGAATTGATCACCATGCCAGAAATCAAAAACCGCCTGGACGCGTTTGTCCGTATCGCTCACGGTATc                                                                <  2:1010050/92‑1 (MQ=255)

                          cTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCa                                                               >  1:2940048/1‑93 (MQ=255)

                           tGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCAt                                                              >  1:5316389/1‑93 (MQ=255)

                            gAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCAtt                                                             >  2:5448896/1‑93 (MQ=255)

                            gAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCAtt                                                             >  2:4465754/1‑93 (MQ=255)

                            gAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCAtt                                                             >  1:5247235/1‑93 (MQ=255)

                              aCCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTAt                                                           <  1:2617525/93‑1 (MQ=255)

                               ccGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATc                                                          <  2:6233061/93‑1 (MQ=255)

                                cGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCt                                                         >  1:1589757/1‑93 (MQ=255)

                                 gCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCtt                                                        <  1:4304817/93‑1 (MQ=255)

                                  ccTAGCCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTCTCTTc                                                       <  1:3500586/93‑1 (MQ=255)

                                  ccTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTc                                                       >  1:828654/1‑93 (MQ=255)

                                  ccTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTc                                                       >  2:5248407/1‑93 (MQ=255)

                                  ccTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTc                                                       >  1:3182048/1‑93 (MQ=255)

                                    tAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTccc                                                     <  2:964844/93‑1 (MQ=255)

                                     aaCCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCt                                                    >  1:4147111/1‑93 (MQ=255)

                                     aaCCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCt                                                    <  2:2657144/93‑1 (MQ=255)

                                      aCCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTg                                                   >  2:2708646/1‑93 (MQ=255)

                                        ccGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCTTTATCTTCCCTGGc                                                 >  2:1348947/1‑93 (MQ=255)

                                          gCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCgg                                               <  1:6069331/93‑1 (MQ=255)

                                            tGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGgtg                                             <  2:3941689/93‑1 (MQ=255)

                                            tGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGgtg                                             <  2:9360470/93‑1 (MQ=255)

                                              gTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGtgtg                                           >  1:8348369/1‑93 (MQ=255)

                                              gTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATATTCCCTGGCGGtgtg                                           >  1:6520764/1‑93 (MQ=255)

                                               tCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTgg                                          <  1:9397494/93‑1 (MQ=255)

                                               tCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTgg                                          <  1:5028068/93‑1 (MQ=255)

                                                cAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGTTATCATTATCTTCCCTGGCGGTGTggg                                         <  1:3868307/93‑1 (MQ=255)

                                                cAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTggg                                         >  2:726750/1‑93 (MQ=255)

                                                cAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTggg                                         >  2:22711/1‑93 (MQ=255)

                                                  aCGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCCTTATCTTCCCTGGCGGTGTGTGTa                                       >  2:1265772/1‑93 (MQ=255)

                                                  aCGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTa                                       <  1:4836638/93‑1 (MQ=255)

                                                  aCGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTa                                       >  1:9245898/1‑93 (MQ=255)

                                                  aCGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTa                                       <  2:3780484/93‑1 (MQ=255)

                                                   cGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTAc                                      <  1:8812989/93‑1 (MQ=255)

                                                    gAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACg                                     >  2:4697645/1‑93 (MQ=255)

                                                      aTTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGc                                   <  2:3620591/93‑1 (MQ=255)

                                                      aTTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGc                                   >  2:760465/1‑93 (MQ=255)

                                                      aTTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGc                                   >  1:2370395/1‑93 (MQ=255)

                                                      aTTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGc                                   <  2:284450/93‑1 (MQ=255)

                                                      aTTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGc                                   <  2:8788089/93‑1 (MQ=255)

                                                      aTTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGc                                   >  2:4878372/1‑93 (MQ=255)

                                                       ttGATCATCATGCCAGATATCGAGAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCa                                  >  2:8945668/1‑93 (MQ=255)

                                                          atcatcATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCagaa                               >  2:3516041/1‑93 (MQ=255)

                                                           tcatcaTGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCagaag                              <  2:140116/93‑1 (MQ=255)

                                                           tcatcaTGCCAGATATCGAAAAACGTCTGGACGCGGTTGTCCGTATCGCTCACGGAATCATTATCTTCCCTCGCTGTGTGCGGACGGGagaag                              >  2:43704/1‑93 (MQ=255)

                                                            catcatGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCagaaga                             <  1:7023171/93‑1 (MQ=255)

                                                            catcatGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCagaaga                             <  2:6920947/93‑1 (MQ=255)

                                                             atcatGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAagag                            >  1:854331/1‑93 (MQ=255)

                                                              tcatGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGt                           >  1:544630/1‑93 (MQ=255)

                                                              tcatGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGGGTGGGTACGGCAGAAGAGt                           >  1:5728007/1‑93 (MQ=255)

                                                               catGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGtt                          <  2:5727292/93‑1 (MQ=255)

                                                                    cAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGctct                     >  1:9123988/1‑93 (MQ=255)

                                                                     aGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGctctt                    >  2:7549953/1‑92 (MQ=255)

                                                                     aGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTa                    <  1:7521466/93‑1 (MQ=255)

                                                                      gATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAt                   <  2:3337880/93‑1 (MQ=255)

                                                                      gATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAt                   >  2:8199438/1‑93 (MQ=255)

                                                                       atatCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAtt                  >  1:20119/1‑93 (MQ=255)

                                                                        tatCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAttt                 <  1:4035723/93‑1 (MQ=255)

                                                                         atCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTg                >  2:8131477/1‑93 (MQ=255)

                                                                          tCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGc               <  1:7265348/93‑1 (MQ=255)

                                                                                aaCGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGaa         <  2:6994095/93‑1 (MQ=255)

                                                                                 aCGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAAt        <  2:6805112/93‑1 (MQ=255)

                                                                                 aCGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAAt        <  1:6695983/93‑1 (MQ=255)

                                                                                  cGTCGGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAAtt       >  2:6486815/1‑93 (MQ=255)

                                                                                    tCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAAtttt     >  2:2361621/1‑93 (MQ=255)

                                                                                      tGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTaa   >  2:7854882/1‑93 (MQ=255)

                                                                                      tGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTaa   >  2:1639251/1‑93 (MQ=255)

                                                                                      tGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTaa   >  2:1098907/1‑93 (MQ=255)

                                                                                       ggACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAAt  >  2:5219712/1‑93 (MQ=255)

TATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAAT  >  NC_000913/2924968‑2925147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGAAC  >  NC_000913/2924965‑2925151

ctcttccgatctagcgcttgatcaattcgtTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAC                                                                                               <  SRR4302540.4755003/64‑1 (MQ=60)

TGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAC                                                                                               <  SRR4302540.6478130/94‑1 (MQ=60)

TGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAC                                                                                               <  SRR4302540.9321707/94‑1 (MQ=60)

TGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAC                                                                                               >  SRR4302540.5507882/1‑94 (MQ=60)

TGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAC                                                                                               <  SRR4302540.573587/94‑1 (MQ=60)

TGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAC                                                                                               <  SRR4302540.7830323/94‑1 (MQ=60)

 GGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACG                                                                                              <  SRR4302540.4507554/94‑1 (MQ=60)

 GGTATGACAGAGCCGTCGATTAGCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACG                                                                                              <  SRR4302540.8678612/94‑1 (MQ=60)

  GTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGC                                                                                             >  SRR4302540.2587809/1‑94 (MQ=60)

  GTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGC                                                                                             >  SRR4302540.1053097/1‑94 (MQ=60)

  GTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGC                                                                                             >  SRR4302540.5388352/1‑94 (MQ=60)

  GTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGC                                                                                             <  SRR4302540.701130/94‑1 (MQ=60)

   GATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCG                                                                                            <  SRR4302540.176953/94‑1 (MQ=60)

    ATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAAGGAATTGATCATCATGCCAGAAATCGAAAAACGTCTGGACGCGT                                                                                           >  SRR4302540.2530048/1‑94 (MQ=60)

    ATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGT                                                                                           <  SRR4302540.1816433/94‑1 (MQ=60)

      GACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTT                                                                                         <  SRR4302540.6022928/94‑1 (MQ=60)

      GACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTT                                                                                         <  SRR4302540.6206830/94‑1 (MQ=60)

      GACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTT                                                                                         <  SRR4302540.10036522/94‑1 (MQ=60)

       ACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAGCCCGTTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTG                                                                                        <  SRR4302540.4110699/94‑1 (MQ=60)

        CAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGT                                                                                       >  SRR4302540.2077202/1‑94 (MQ=60)

         AGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTC                                                                                      <  SRR4302540.9226809/94‑1 (MQ=60)

         AGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTC                                                                                      <  SRR4302540.453986/94‑1 (MQ=60)

          GAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCC                                                                                     <  SRR4302540.8973252/94‑1 (MQ=60)

           AGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCG                                                                                    <  SRR4302540.10014497/94‑1 (MQ=60)

           AGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCG                                                                                    >  SRR4302540.2291059/1‑94 (MQ=60)

            GCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGT                                                                                   >  SRR4302540.1891627/1‑94 (MQ=60)

             CCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTA                                                                                  >  SRR4302540.1930169/1‑94 (MQ=60)

              CGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTAT                                                                                 <  SRR4302540.8960759/94‑1 (MQ=60)

              CGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTAT                                                                                 <  SRR4302540.1147240/94‑1 (MQ=60)

              CGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTAT                                                                                 <  SRR4302540.4214008/94‑1 (MQ=60)

               GTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATC                                                                                <  SRR4302540.4942610/94‑1 (MQ=60)

               GTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATC                                                                                >  SRR4302540.9686242/1‑94 (MQ=60)

               GTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATC                                                                                >  SRR4302540.6471417/1‑94 (MQ=60)

               GTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATC                                                                                >  SRR4302540.7578209/1‑94 (MQ=60)

               GTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATC                                                                                >  SRR4302540.7575108/1‑94 (MQ=60)

               GTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATC                                                                                >  SRR4302540.9876209/1‑94 (MQ=60)

               GTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATACCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATC                                                                                >  SRR4302540.10082749/1‑94 (MQ=60)

                TCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCG                                                                               <  SRR4302540.8431579/94‑1 (MQ=60)

                 CGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCCACGAATTGATCATCATGCCAGATATCGAAAAAACTCTGGACGCGTTTGTCCGTATCGC                                                                              >  SRR4302540.3779818/1‑94 (MQ=60)

                 CGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGC                                                                              >  SRR4302540.138180/1‑94 (MQ=60)

                  GATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCT                                                                             >  SRR4302540.4553999/1‑94 (MQ=60)

                   ATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTC                                                                            >  SRR4302540.2358146/1‑94 (MQ=60)

                   ATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTC                                                                            >  SRR4302540.8774129/1‑94 (MQ=60)

                   ATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGACAGATATCGACAAACGTCTGGAAGCGTTTGTCAGTATCGCTC                                                                            >  SRR4302540.7099434/1‑94 (MQ=60)

                    TTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCA                                                                           >  SRR4302540.833535/1‑94 (MQ=60)

                     TATCGGCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCAC                                                                          <  SRR4302540.2634604/94‑1 (MQ=60)

                     TATCGCCCCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATAGAAAAACGTCTGTACGCGTCTGTCCGTATCGCTCAC                                                                          >  SRR4302540.4104155/1‑94 (MQ=60)

                      ATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACG                                                                         >  SRR4302540.3790344/1‑94 (MQ=60)

                      ATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACG                                                                         >  SRR4302540.3360985/1‑94 (MQ=60)

                        cgccgcgtgACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGT                                                                       <  SRR4302540.7942007/85‑1 (MQ=60)

                         GCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTA                                                                      >  SRR4302540.7268230/1‑94 (MQ=60)

                          CCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTAT                                                                     <  SRR4302540.1978975/94‑1 (MQ=60)

                          CCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTAT                                                                     <  SRR4302540.8251792/94‑1 (MQ=60)

                          CCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTAT                                                                     >  SRR4302540.109800/1‑94 (MQ=60)

                           CGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATC                                                                    >  SRR4302540.3758574/1‑94 (MQ=60)

                            GCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCA                                                                   >  SRR4302540.1578417/1‑94 (MQ=60)

                            GCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCA                                                                   >  SRR4302540.2972333/1‑94 (MQ=60)

                            GCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCA                                                                   <  SRR4302540.7961941/94‑1 (MQ=60)

                             CTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGCCGCGTTTGTCCGTATCGCTCACGGTATCAT                                                                  >  SRR4302540.2421490/1‑94 (MQ=60)

                             CTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCAT                                                                  <  SRR4302540.8188676/94‑1 (MQ=60)

                             CTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCAT                                                                  >  SRR4302540.5374596/1‑94 (MQ=60)

                              TGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATT                                                                 >  SRR4302540.5304468/1‑94 (MQ=60)

                               GAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTA                                                                >  SRR4302540.9641597/1‑94 (MQ=60)

                                agccaaCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAACAACGTCTGGACGCTTTTGTCCGTATCGCTCACGGTATCATTAT                                                               <  SRR4302540.8810890/88‑1 (MQ=60)

                                AACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTAT                                                               <  SRR4302540.8759111/94‑1 (MQ=60)

                                 ACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATC                                                              <  SRR4302540.2645811/94‑1 (MQ=60)

                                  CCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCT                                                             >  SRR4302540.1607116/1‑94 (MQ=60)

                                   CGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTT                                                            <  SRR4302540.770067/94‑1 (MQ=60)

                                    GCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTC                                                           >  SRR4302540.837460/1‑94 (MQ=60)

                                    GCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTC                                                           <  SRR4302540.4351672/94‑1 (MQ=60)

                                    GCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTC                                                           >  SRR4302540.4997714/1‑94 (MQ=60)

                                    GCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTC                                                           >  SRR4302540.3216623/1‑94 (MQ=60)

                                    GCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTC                                                           >  SRR4302540.6682253/1‑94 (MQ=60)

                                     CCTAGCCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTCTCTTCC                                                          <  SRR4302540.3538712/94‑1 (MQ=60)

                                     CCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCC                                                          <  SRR4302540.6732989/94‑1 (MQ=60)

                                      CTAACCCGCTTGTCAACGAATTTATCAGCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCC                                                         <  SRR4302540.8965063/94‑1 (MQ=60)

                                      CTAACCCGCTGGTCAACGCATTGATCATCATGCCAGATATCGAAAAACGTCTGAAGGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCT                                                         >  SRR4302540.8180376/1‑94 (MQ=60)

                                      CTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCC                                                         >  SRR4302540.1850090/1‑94 (MQ=60)

                                      CTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCC                                                         >  SRR4302540.1464572/1‑94 (MQ=60)

                                      CTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCC                                                         >  SRR4302540.2028083/1‑94 (MQ=60)

                                      CTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCC                                                         >  SRR4302540.5898938/1‑94 (MQ=60)

                                      CTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCC                                                         >  SRR4302540.3672298/1‑94 (MQ=60)

                                       TAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCT                                                        >  SRR4302540.4191997/1‑94 (MQ=60)

                                        AACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTG                                                       >  SRR4302540.4428237/1‑94 (MQ=60)

                                        AACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTG                                                       <  SRR4302540.3592328/94‑1 (MQ=60)

                                        AACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTG                                                       <  SRR4302540.7368925/94‑1 (MQ=60)

                                        AACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTG                                                       <  SRR4302540.6856397/94‑1 (MQ=60)

                                         ACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGG                                                      <  SRR4302540.8411111/94‑1 (MQ=60)

                                           CCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCG                                                    >  SRR4302540.3822911/1‑94 (MQ=60)

                                           CCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTCGCG                                                    >  SRR4302540.8520200/1‑94 (MQ=60)

                                            CGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGG                                                   >  SRR4302540.3516119/1‑94 (MQ=60)

                                             GCTGGTCAACGAATTGATCATTATGCCAAATATCCAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGT                                                  <  SRR4302540.6136809/94‑1 (MQ=60)

                                             GCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGT                                                  <  SRR4302540.3377114/94‑1 (MQ=60)

                                             GCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGT                                                  <  SRR4302540.6136808/94‑1 (MQ=60)

                                              CTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTG                                                 <  SRR4302540.230356/94‑1 (MQ=60)

                                               TGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGT                                                <  SRR4302540.2453753/94‑1 (MQ=60)

                                               TGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGG                                                >  SRR4302540.7268636/1‑94 (MQ=60)

                                                GGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTG                                               >  SRR4302540.92295/1‑94 (MQ=60)

                                                GGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTG                                               >  SRR4302540.8445262/1‑94 (MQ=60)

                                                GGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGGG                                               >  SRR4302540.8810047/1‑94 (MQ=60)

                                                GGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATATTCCCTGGCGGTGTG                                               >  SRR4302540.6593193/1‑94 (MQ=60)

                                                 GTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGG                                              <  SRR4302540.5368284/94‑1 (MQ=60)

                                                  TCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGG                                             <  SRR4302540.9509310/94‑1 (MQ=60)

                                                  TCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGG                                             <  SRR4302540.5082485/94‑1 (MQ=60)

                                                  TCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCCCTCACGGTATCATTATCTTCCCTGGCGGTGTGGG                                             <  SRR4302540.5319654/94‑1 (MQ=60)

                                                   CAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGTTATCATTATCTTCCCTGGCGGTGTGGGT                                            <  SRR4302540.3910361/94‑1 (MQ=60)

                                                   CAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGT                                            <  SRR4302540.9437857/94‑1 (MQ=60)

                                                    AACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTA                                           <  SRR4302540.3996437/94‑1 (MQ=60)

                                                    AACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTA                                           >  SRR4302540.9356608/1‑94 (MQ=60)

                                                    AACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTA                                           >  SRR4302540.9356607/1‑94 (MQ=60)

                                                    AACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTA                                           <  SRR4302540.801684/94‑1 (MQ=60)

                                                    AACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTA                                           >  SRR4302540.1332947/1‑94 (MQ=60)

                                                    AACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTA                                           >  SRR4302540.9020344/1‑94 (MQ=60)

                                                     ACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTAC                                          <  SRR4302540.4888448/94‑1 (MQ=60)

                                                     ACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTAC                                          <  SRR4302540.2639889/94‑1 (MQ=60)

                                                      CGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACG                                         >  SRR4302540.3369685/1‑94 (MQ=60)

                                                      CGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACG                                         <  SRR4302540.8914887/94‑1 (MQ=60)

                                                      CGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACG                                         <  SRR4302540.1849598/94‑1 (MQ=60)

                                                      CGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACG                                         >  SRR4302540.649537/1‑94 (MQ=60)

                                                       GAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGG                                        >  SRR4302540.6752754/1‑94 (MQ=60)

                                                       GAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGG                                        >  SRR4302540.1882397/1‑94 (MQ=60)

                                                       GAATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGG                                        >  SRR4302540.4862602/1‑94 (MQ=60)

                                                        AATTGATCATCATGCCAGATATCGCAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTCCGGC                                       >  SRR4302540.7814849/1‑94 (MQ=60)

                                                        AATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGC                                       >  SRR4302540.3760883/1‑94 (MQ=60)

                                                        AATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGC                                       <  SRR4302540.2824484/94‑1 (MQ=60)

                                                        AATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGC                                       >  SRR4302540.2395926/1‑94 (MQ=60)

                                                         ATTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCA                                      >  SRR4302540.5504794/1‑94 (MQ=60)

                                                          TTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAG                                     <  SRR4302540.3035480/94‑1 (MQ=60)

                                                          TTGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAG                                     <  SRR4302540.8628157/94‑1 (MQ=60)

                                                           TGATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGA                                    <  SRR4302540.2191813/94‑1 (MQ=60)

                                                            GATCATCATGCCAGATATCGATAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAA                                   <  SRR4302540.5107384/94‑1 (MQ=60)

                                                             ATCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAG                                  >  SRR4302540.2877993/1‑94 (MQ=60)

                                                              TCATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGA                                 <  SRR4302540.4451699/94‑1 (MQ=60)

                                                               CATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAG                                >  SRR4302540.863402/1‑94 (MQ=60)

                                                               CATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAG                                <  SRR4302540.7101180/94‑1 (MQ=60)

                                                                ATCATGCCAGCTATCGAAAAACGTCTGGACGCGTTTGTACGTATCGCTCACGGTATCATTATCTTCGCTGGCGGTGTGGGgacgtcagctgagt                               >  SRR4302540.1162468/1‑80 (MQ=60)

                                                                ATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGT                               >  SRR4302540.1236909/1‑94 (MQ=60)

                                                                ATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGT                               >  SRR4302540.5791084/1‑94 (MQ=60)

                                                                ATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGT                               >  SRR4302540.550557/1‑94 (MQ=60)

                                                                ATCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGGGTGGGTACGGCAGAAGAGT                               >  SRR4302540.5791085/1‑94 (MQ=60)

                                                                 TCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTT                              <  SRR4302540.6192242/94‑1 (MQ=60)

                                                                 TCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTT                              <  SRR4302540.9475429/94‑1 (MQ=60)

                                                                 GCATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTT                              <  SRR4302540.3330313/94‑1 (MQ=60)

                                                                  CATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTG                             <  SRR4302540.5307406/94‑1 (MQ=60)

                                                                  CATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTG                             >  SRR4302540.133338/1‑94 (MQ=60)

                                                                   ATGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGC                            >  SRR4302540.2726641/1‑94 (MQ=60)

                                                                    TGCCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCT                           >  SRR4302540.1793197/1‑94 (MQ=60)

                                                                    AGCCAGATATCGAAAAACGTCTGGCCTCGTTTGTCCGAATCCCTCACGTTATCATTAGCTTCCCTGGCGGTGTGGGGACGGCAGAAGACTTGAT                           <  SRR4302540.9218333/94‑1 (MQ=48)

                                                                      CCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCT                         >  SRR4302540.10003408/1‑94 (MQ=60)

                                                                      CCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCT                         >  SRR4302540.5658338/1‑94 (MQ=60)

                                                                      CCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCT                         >  SRR4302540.9233658/1‑94 (MQ=60)

                                                                      CCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCT                         <  SRR4302540.8496037/94‑1 (MQ=60)

                                                                      CCAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCT                         >  SRR4302540.8318154/1‑94 (MQ=60)

                                                                       CAGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGAGTGGGTACGGCAGAAGAGGTGCTCTA                        >  SRR4302540.4760705/1‑94 (MQ=60)

                                                                        AGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAT                       >  SRR4302540.3315329/1‑94 (MQ=60)

                                                                        AGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAT                       >  SRR4302540.3852035/1‑94 (MQ=60)

                                                                        AGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAT                       <  SRR4302540.3857825/94‑1 (MQ=60)

                                                                        AGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAT                       >  SRR4302540.2979137/1‑94 (MQ=60)

                                                                        AGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAT                       <  SRR4302540.7605594/94‑1 (MQ=60)

                                                                        AGATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTAT                       >  SRR4302540.1400294/1‑94 (MQ=60)

                                                                         GATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATT                      >  SRR4302540.20337/1‑94 (MQ=60)

                                                                          ATATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTT                     >  SRR4302540.5921964/1‑94 (MQ=60)

                                                                           TATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTG                    <  SRR4302540.9547658/94‑1 (MQ=60)

                                                                           TATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTG                    <  SRR4302540.4079241/94‑1 (MQ=60)

                                                                           TATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTG                    <  SRR4302540.5622052/94‑1 (MQ=60)

                                                                           TATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTG                    <  SRR4302540.6270243/94‑1 (MQ=60)

                                                                            ATCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGC                   >  SRR4302540.4240528/1‑94 (MQ=60)

                                                                             TCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCT                  <  SRR4302540.3965731/94‑1 (MQ=60)

                                                                             TCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCT                  <  SRR4302540.3959095/94‑1 (MQ=60)

                                                                             TCGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCT                  <  SRR4302540.7346417/94‑1 (MQ=60)

                                                                              TGAAAAACGTCTGGGCGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTG                 <  SRR4302540.2368976/94‑1 (MQ=60)

                                                                              CGAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTGCGGCAGAAGAGTTGCTCTATTTGCTG                 <  SRR4302540.8298202/94‑1 (MQ=60)

                                                                               GAAAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGG                <  SRR4302540.9272971/94‑1 (MQ=60)

                                                                                 AAAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGCAGAGCTGCTCTATTTGCTGGGA              >  SRR4302540.1131769/1‑94 (MQ=60)

                                                                                  AAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAA             >  SRR4302540.3562850/1‑94 (MQ=60)

                                                                                  AAACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAA             <  SRR4302540.5233887/94‑1 (MQ=60)

                                                                                    ACGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATT           <  SRR4302540.6769901/94‑1 (MQ=60)

                                                                                     CGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTT          >  SRR4302540.5065626/1‑94 (MQ=60)

                                                                                     CGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTT          >  SRR4302540.3117165/1‑94 (MQ=60)

                                                                                     CGTCTGGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTT          >  SRR4302540.4316604/1‑94 (MQ=60)

                                                                                      GTCTGGACGCGTTTGTCCGTATCGCTCACGGCATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTT         >  SRR4302540.7172550/1‑94 (MQ=60)

                                                                                          GGACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATG     <  SRR4302540.5299531/94‑1 (MQ=60)

                                                                                           GACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGA    <  SRR4302540.4835018/94‑1 (MQ=60)

                                                                                           GACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGA    >  SRR4302540.388729/1‑94 (MQ=60)

                                                                                            ACGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGAA   <  SRR4302540.9108438/94‑1 (MQ=60)

                                                                                             CGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGAAC  <  SRR4302540.8148004/94‑1 (MQ=60)

                                                                                             CGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGAAC  <  SRR4302540.67875/94‑1 (MQ=60)

TGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGAAC  >  NC_000913/2924965‑2925151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`