Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,930,115 G→A G308G (GGC→GGT)  fucO ← L‑1,2‑propanediol oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,930,1150GA96.6% 1157.0 / 11.0 355G308G (GGC→GGT) fucOL‑1,2‑propanediol oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (4/8);  new base A (167/175);  total (172/183)
Fisher's exact test for biased strand distribution p-value = 3.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.13e-01

Only 100 of 368 total aligned reads displayed.

TGGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAAC  >  NC_000913/2930025‑2930204
                                                                                          |                                                                                         
  gCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCa                                                                                       <  1:5652213/93‑1 (MQ=255)
   cGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCAt                                                                                      <  1:2230170/93‑1 (MQ=255)
     gAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATaa                                                                                    >  1:5610101/1‑93 (MQ=255)
      aaTACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAAc                                                                                   >  2:2780267/1‑93 (MQ=255)
       aTACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACCCCCATAAcc                                                                                  >  2:7224122/1‑92 (MQ=255)
       aTACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAAcg                                                                                  >  2:6722029/1‑93 (MQ=255)
        tACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAAcgc                                                                                 >  1:7694987/1‑93 (MQ=255)
        tACCGACATCACGGTTGAGAGCAAAAACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAAcgc                                                                                 >  2:2936569/1‑93 (MQ=255)
          ccGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAAcgcgc                                                                               <  2:9764180/93‑1 (MQ=255)
          ccGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAAcgcgc                                                                               >  1:6894166/1‑93 (MQ=255)
            gACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAAcgcgcgc                                                                             <  2:7910785/93‑1 (MQ=255)
              cATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCTCGa                                                                           >  1:1927629/1‑93 (MQ=255)
               aTCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGat                                                                          >  2:9580606/1‑93 (MQ=255)
                tCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGata                                                                         <  2:7286712/93‑1 (MQ=255)
                tCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGata                                                                         >  1:469139/1‑93 (MQ=255)
                 ctccgTTGAGAGCAAACACCGCTTCAAAAGCGGCATTACGCTCATTTTCCAGGCTCATCCCTTCCCCTTTCACCCCCATAGCGCGCGCGatat                                                                        <  2:8139995/89‑1 (MQ=255)
                 cACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGatat                                                                        <  1:3419291/93‑1 (MQ=255)
                 cACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGatat                                                                        <  2:4648060/93‑1 (MQ=255)
                  aCGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATc                                                                       <  2:473555/93‑1 (MQ=255)
                     gTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATcgcg                                                                    >  2:8233800/1‑93 (MQ=255)
                     gTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATcgcg                                                                    >  2:8729323/1‑93 (MQ=255)
                       tGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGt                                                                  <  1:5520608/93‑1 (MQ=255)
                         agagCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTAc                                                                <  1:7568702/93‑1 (MQ=255)
                         agagCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTAc                                                                <  1:5344599/93‑1 (MQ=255)
                          gagCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACt                                                               <  2:6164962/93‑1 (MQ=255)
                          gagCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACt                                                               >  2:314653/1‑93 (MQ=255)
                            gCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCAATAACGCGCGCGATATCGCGGTACTtc                                                             >  1:2744749/1‑93 (MQ=255)
                             cAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATATCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTtct                                                            >  1:1314474/1‑93 (MQ=255)
                             cAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTtct                                                            <  1:7794438/93‑1 (MQ=255)
                             cAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTtct                                                            >  1:3842259/1‑93 (MQ=255)
                             cAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTtct                                                            <  1:885278/93‑1 (MQ=255)
                              aaaCACCGCTTGAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTtctc                                                           <  1:8036801/93‑1 (MQ=255)
                              aaaCACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTtctc                                                           <  1:7852265/93‑1 (MQ=255)
                              aaaCACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTtctc                                                           >  2:2549650/1‑93 (MQ=255)
                              aaaCACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTtctc                                                           >  2:4846179/1‑93 (MQ=255)
                               aaCACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCa                                                          >  2:1712245/1‑93 (MQ=255)
                               aaCACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCa                                                          >  1:6392986/1‑93 (MQ=255)
                               aaCACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCa                                                          >  2:8564992/1‑93 (MQ=255)
                                acacCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCAc                                                         >  2:1515861/1‑93 (MQ=255)
                                acacCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCAc                                                         <  1:1767355/93‑1 (MQ=255)
                                 cacCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCAcc                                                        <  1:8332222/93‑1 (MQ=255)
                                   ccGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCgg                                                      <  1:5013430/93‑1 (MQ=255)
                                     gCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTa                                                    >  1:3332503/1‑93 (MQ=255)
                                     ccTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTa                                                    <  2:1958232/92‑1 (MQ=255)
                                       ttCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTaaa                                                  <  2:9091770/93‑1 (MQ=255)
                                       ttCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTaaa                                                  <  2:3930085/93‑1 (MQ=255)
                                       ttCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTaaa                                                  <  1:8381238/93‑1 (MQ=255)
                                       ttCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTaaa                                                  <  2:7796201/93‑1 (MQ=255)
                                        tCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAg                                                 >  2:4247249/1‑93 (MQ=255)
                                        tCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAg                                                 <  2:1301149/93‑1 (MQ=255)
                                          aaCAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTc                                               >  2:4182827/1‑93 (MQ=255)
                                          aaCAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTc                                               >  2:5546417/1‑93 (MQ=255)
                                           aCAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCa                                              <  1:4856122/93‑1 (MQ=255)
                                           aCAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCa                                              <  1:3018844/93‑1 (MQ=255)
                                            cAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAg                                             >  2:1153871/1‑93 (MQ=255)
                                             cgCGGCATTACGCGCCTCTTCCAGGCTCATTCCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGc                                            <  1:8646266/92‑1 (MQ=255)
                                                ggCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGtt                                         <  2:7662433/93‑1 (MQ=255)
                                                   aTTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTACAGTCAGCGTtata                                      >  1:1299817/1‑93 (MQ=255)
                                                   aTTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTtata                                      >  1:2442420/1‑93 (MQ=255)
                                                    ttACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTCCTTCTCACCGGTAAAGTCAGCGTTATaa                                     <  2:3791876/93‑1 (MQ=255)
                                                    ttACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATaa                                     <  1:9564964/93‑1 (MQ=255)
                                                    ttACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATaa                                     <  2:6350144/93‑1 (MQ=255)
                                                          gcCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATg                               >  2:6815823/1‑93 (MQ=255)
                                                          gcCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATg                               >  1:4022424/1‑93 (MQ=255)
                                                           ccTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGa                              >  1:9764409/1‑93 (MQ=255)
                                                             tctTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACa                            <  1:3065508/93‑1 (MQ=255)
                                                             tctTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACa                            <  1:6230235/93‑1 (MQ=255)
                                                             cctTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACa                            <  2:1378273/92‑1 (MQ=255)
                                                              ctTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAt                           <  2:6576696/93‑1 (MQ=255)
                                                              ctTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAt                           <  2:5784800/93‑1 (MQ=255)
                                                               ttCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATg                          >  2:3341319/1‑93 (MQ=255)
                                                               ttCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATg                          >  2:1810469/1‑93 (MQ=255)
                                                                 ccAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCg                        >  1:1414415/1‑93 (MQ=255)
                                                                     gCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTaa                    >  1:8558106/1‑93 (MQ=255)
                                                                      cTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAAc                   <  1:2307284/93‑1 (MQ=255)
                                                                       tCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACa                  >  1:6827666/1‑93 (MQ=255)
                                                                       tCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACa                  >  1:2078982/1‑93 (MQ=255)
                                                                       tCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACa                  >  1:8584459/1‑93 (MQ=255)
                                                                       tCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACa                  >  2:2400558/1‑93 (MQ=255)
                                                                        cATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAg                 <  2:1006389/93‑1 (MQ=255)
                                                                        cATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGCACTTCTCACCGGTAAAGTCAGCGCTATAACGCATGACATGCGGTAACAg                 >  1:2626447/1‑93 (MQ=255)
                                                                         aTACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAgg                <  2:3606840/93‑1 (MQ=255)
                                                                          tACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGa               >  2:2249863/1‑93 (MQ=255)
                                                                          tACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGa               >  2:8851914/1‑93 (MQ=255)
                                                                          tACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGa               <  1:4143109/93‑1 (MQ=255)
                                                                          tACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGa               >  1:7094018/1‑93 (MQ=255)
                                                                          tACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGAGGTAACAGGa               >  2:4459692/1‑93 (MQ=255)
                                                                           cccTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGAt              <  1:4425850/92‑1 (MQ=255)
                                                                            ccTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGCAACAGGATg             >  1:7363709/1‑93 (MQ=255)
                                                                             cTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATgg            <  1:1161733/93‑1 (MQ=255)
                                                                               tCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCg          >  2:5693636/1‑93 (MQ=255)
                                                                                ccACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGt         >  2:7482373/1‑93 (MQ=255)
                                                                                 cACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGtt        <  1:7284003/93‑1 (MQ=255)
                                                                                 cACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAGGCGGTAACAGGATGGCGtt        <  1:6009167/93‑1 (MQ=255)
                                                                                   cTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCg      >  1:8985423/1‑93 (MQ=255)
                                                                                    tttCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGc     >  2:9847506/1‑93 (MQ=255)
                                                                                      tCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCaa   <  2:6028202/93‑1 (MQ=255)
                                                                                      tCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCaa   <  1:9967000/93‑1 (MQ=255)
                                                                                       cacaCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAac  >  2:9291199/1‑93 (MQ=255)
                                                                                       cacaCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAac  <  1:931392/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAAC  >  NC_000913/2930025‑2930204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 203 total aligned reads displayed.
ATGTGGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACACCG  >  NC_000913/2930022‑2930208
                                                                                             |                                                                                             
ATGTGGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACA                                                                                               <  SRR4302540.1928527/94‑1 (MQ=60)
ATGTGGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACA                                                                                               >  SRR4302540.9527234/1‑94 (MQ=60)
  GTGGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACC                                                                                             <  SRR4302540.1754066/94‑1 (MQ=60)
   TGGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCC                                                                                            <  SRR4302540.9713912/94‑1 (MQ=60)
    GGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCA                                                                                           >  SRR4302540.8752874/1‑94 (MQ=60)
     GCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCAT                                                                                          <  SRR4302540.1272817/94‑1 (MQ=60)
     GCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCAT                                                                                          <  SRR4302540.7329488/94‑1 (MQ=60)
     GCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCAT                                                                                          <  SRR4302540.5714443/94‑1 (MQ=60)
      GGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATA                                                                                         <  SRR4302540.921467/94‑1 (MQ=60)
      CGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATA                                                                                         <  SRR4302540.2254192/94‑1 (MQ=60)
       GGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAA                                                                                        >  SRR4302540.4578676/1‑94 (MQ=60)
       GGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAA                                                                                        <  SRR4302540.2387839/94‑1 (MQ=60)
       GGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAA                                                                                        >  SRR4302540.5671818/1‑94 (MQ=60)
       GGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAA                                                                                        >  SRR4302540.361975/1‑94 (MQ=60)
        GAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAAC                                                                                       >  SRR4302540.169320/1‑94 (MQ=60)
         AATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACG                                                                                      >  SRR4302540.1387916/1‑94 (MQ=60)
         AATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACG                                                                                      <  SRR4302540.4099147/94‑1 (MQ=60)
         AATACCGACATCACGGTTCAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACG                                                                                      >  SRR4302540.2941491/1‑94 (MQ=60)
          ATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGC                                                                                     >  SRR4302540.7782640/1‑94 (MQ=60)
           TACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATCCCTTCCACTTTCACACCCATAACGCG                                                                                    <  SRR4302540.5264173/94‑1 (MQ=60)
            ACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGC                                                                                   <  SRR4302540.9447632/94‑1 (MQ=60)
            ACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGC                                                                                   >  SRR4302540.6970665/1‑94 (MQ=60)
             CCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCG                                                                                  >  SRR4302540.7376564/1‑94 (MQ=60)
               GACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCG                                                                                >  SRR4302540.5551297/1‑94 (MQ=60)
                ACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCTCGA                                                                               >  SRR4302540.1948642/1‑94 (MQ=60)
                 CATCACGGTTGAGAGCAAACACCGCTTCAACAGGGGCATTCCGCGCCTCTTCCAGGCTCATACCTTCCACTTCCACACCCATAACGCGCGCGAT                                                                              <  SRR4302540.2333742/94‑1 (MQ=60)
                 CATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGAT                                                                              <  SRR4302540.7736108/94‑1 (MQ=60)
                  ATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATA                                                                             >  SRR4302540.474161/1‑94 (MQ=60)
                   TCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATAT                                                                            >  SRR4302540.4562248/1‑94 (MQ=60)
                   TCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATAT                                                                            >  SRR4302540.8251942/1‑94 (MQ=60)
                   TCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATAT                                                                            <  SRR4302540.3117294/94‑1 (MQ=60)
                   TCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATAT                                                                            <  SRR4302540.9149801/94‑1 (MQ=60)
                    CACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATC                                                                           <  SRR4302540.8505738/94‑1 (MQ=60)
                    CACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATC                                                                           >  SRR4302540.6928083/1‑94 (MQ=60)
                     ACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCG                                                                          <  SRR4302540.9070102/94‑1 (MQ=60)
                      CGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGC                                                                         >  SRR4302540.2644283/1‑94 (MQ=60)
                      CGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGC                                                                         <  SRR4302540.8729907/94‑1 (MQ=60)
                      CGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGC                                                                         >  SRR4302540.6317314/1‑94 (MQ=60)
                      CGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGC                                                                         >  SRR4302540.941991/1‑94 (MQ=60)
                      CGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGC                                                                         <  SRR4302540.8729908/94‑1 (MQ=60)
                       GGTTGAGAGCAAACACCGCTTCCACAGCGGCATTACGCGCCTCTTCCAGGCTCATCCCTTACAATTTCACACCCATAACGCGCGCGATATCGCG                                                                        <  SRR4302540.9065504/94‑1 (MQ=60)
                       GGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCG                                                                        >  SRR4302540.6487377/1‑94 (MQ=60)
                        GTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGG                                                                       <  SRR4302540.9736868/94‑1 (MQ=60)
                        GTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGG                                                                       <  SRR4302540.6199134/94‑1 (MQ=60)
                         TTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGT                                                                      <  SRR4302540.5005443/94‑1 (MQ=60)
                          TGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTA                                                                     <  SRR4302540.8681176/94‑1 (MQ=60)
                          TGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTA                                                                     <  SRR4302540.5581406/94‑1 (MQ=60)
                           GAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTAC                                                                    <  SRR4302540.5840099/94‑1 (MQ=60)
                            AGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACT                                                                   <  SRR4302540.5403229/94‑1 (MQ=60)
                            AGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACT                                                                   <  SRR4302540.7653607/94‑1 (MQ=60)
                             GAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTT                                                                  <  SRR4302540.5082428/94‑1 (MQ=60)
                             GAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTT                                                                  <  SRR4302540.6526113/94‑1 (MQ=60)
                              AGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTC                                                                 >  SRR4302540.3097242/1‑94 (MQ=60)
                              AGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCAATAACGCGCGCGATATCGCGGTACTTC                                                                 >  SRR4302540.2774393/1‑94 (MQ=60)
                               GCAACCACCGCTTCCACAGCGGCATTACGCGCCTCTTCCCGGCTCCTACCTTCCACTCTCACACCCATAACGCGCGCGATATCGCGGTCCTACT                                                                >  SRR4302540.1328140/1‑94 (MQ=60)
                               GCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATATCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCT                                                                >  SRR4302540.1328141/1‑94 (MQ=60)
                               GCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCT                                                                >  SRR4302540.3884045/1‑94 (MQ=60)
                                CAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTC                                                               >  SRR4302540.5658846/1‑94 (MQ=60)
                                CAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTC                                                               <  SRR4302540.894671/94‑1 (MQ=60)
                                CAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTC                                                               >  SRR4302540.1321578/1‑94 (MQ=60)
                                CAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTC                                                               <  SRR4302540.7885547/94‑1 (MQ=60)
                                CAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTC                                                               <  SRR4302540.5202225/94‑1 (MQ=60)
                                 AAACACCGCTTGAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCA                                                              <  SRR4302540.8130210/94‑1 (MQ=60)
                                 AAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCA                                                              >  SRR4302540.2940054/1‑94 (MQ=60)
                                 AAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCA                                                              >  SRR4302540.2305913/1‑94 (MQ=60)
                                 AAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCA                                                              >  SRR4302540.795010/1‑94 (MQ=60)
                                 AAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCA                                                              >  SRR4302540.6464151/1‑94 (MQ=60)
                                 AAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCA                                                              <  SRR4302540.7944017/94‑1 (MQ=60)
                                  AACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCAC                                                             >  SRR4302540.7290798/1‑94 (MQ=60)
                                   ACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACC                                                            <  SRR4302540.1786530/94‑1 (MQ=60)
                                   ACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACC                                                            <  SRR4302540.4636289/94‑1 (MQ=60)
                                   ACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACC                                                            <  SRR4302540.1786531/94‑1 (MQ=60)
                                    CACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCG                                                           <  SRR4302540.7756502/94‑1 (MQ=60)
                                    CACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCG                                                           <  SRR4302540.8428939/94‑1 (MQ=60)
                                    CACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCG                                                           <  SRR4302540.8555963/94‑1 (MQ=60)
                                    CACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCG                                                           >  SRR4302540.4860828/1‑94 (MQ=60)
                                    CACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCG                                                           <  SRR4302540.571815/94‑1 (MQ=60)
                                    CACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCG                                                           <  SRR4302540.2745982/94‑1 (MQ=60)
                                      CCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGT                                                         <  SRR4302540.5067710/94‑1 (MQ=60)
                                      CCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGT                                                         >  SRR4302540.3902616/1‑94 (MQ=60)
                                       CGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCAATAACGCGCGCGATATCGCGGTACTTCTCACCGGTA                                                        >  SRR4302540.3155250/1‑94 (MQ=60)
                                       CGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTA                                                        <  SRR4302540.7209835/94‑1 (MQ=60)
                                       CGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTA                                                        >  SRR4302540.1571335/1‑94 (MQ=60)
                                       CGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTA                                                        >  SRR4302540.3369093/1‑94 (MQ=60)
                                        GCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAA                                                       >  SRR4302540.8176089/1‑94 (MQ=60)
                                        GCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAA                                                       >  SRR4302540.8170823/1‑94 (MQ=60)
                                         CTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCCCCGGTAAA                                                      >  SRR4302540.2228796/1‑94 (MQ=60)
                                         CTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAA                                                      <  SRR4302540.6526427/94‑1 (MQ=60)
                                         CTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAA                                                      >  SRR4302540.353980/1‑94 (MQ=60)
                                         CTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAA                                                      >  SRR4302540.3398539/1‑94 (MQ=60)
                                          TTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAG                                                     <  SRR4302540.8478488/94‑1 (MQ=60)
                                          TTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAG                                                     >  SRR4302540.6353756/1‑94 (MQ=60)
                                           TCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATGCCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGT                                                    <  SRR4302540.1280881/94‑1 (MQ=60)
                                           TCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGT                                                    <  SRR4302540.2670059/94‑1 (MQ=60)
                                            CAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTC                                                   <  SRR4302540.7448201/94‑1 (MQ=60)
                                            CAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTC                                                   <  SRR4302540.7028275/94‑1 (MQ=60)
                                             AACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCA                                                  >  SRR4302540.5672211/1‑94 (MQ=60)
                                             AACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCA                                                  <  SRR4302540.8887313/94‑1 (MQ=60)
                                              ACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAG                                                 <  SRR4302540.3052026/94‑1 (MQ=60)
                                              ACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAG                                                 <  SRR4302540.4291449/94‑1 (MQ=60)
                                              ACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAG                                                 <  SRR4302540.4908180/94‑1 (MQ=60)
                                               CAGCTGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGC                                                <  SRR4302540.6911238/94‑1 (MQ=60)
                                               CAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAAC                                                >  SRR4302540.5507203/1‑94 (MQ=60)
                                                CGCGGCATTACGCGCCTCTTCCAGGCTCATTCCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCG                                               <  SRR4302540.8746707/94‑1 (MQ=60)
                                                AGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCG                                               >  SRR4302540.5512138/1‑94 (MQ=60)
                                                  CGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCACCCGTAAAGTGAGCGTT                                             >  SRR4302540.6103485/1‑94 (MQ=60)
                                                     CATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTACAGTCAGCGTTATA                                          >  SRR4302540.1313290/1‑94 (MQ=60)
                                                     CATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATA                                          <  SRR4302540.5626838/94‑1 (MQ=60)
                                                     CATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATA                                          >  SRR4302540.2468722/1‑94 (MQ=60)
                                                       TTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAAC                                        <  SRR4302540.3379794/94‑1 (MQ=60)
                                                       TTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAAC                                        >  SRR4302540.2389130/1‑94 (MQ=60)
                                                       TTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAAC                                        <  SRR4302540.9678017/94‑1 (MQ=60)
                                                        TACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACG                                       <  SRR4302540.848024/94‑1 (MQ=60)
                                                            CGCCTCTTCCAGGCTCATACCTTCCGCTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATG                                   <  SRR4302540.4386901/94‑1 (MQ=60)
                                                            CGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATG                                   >  SRR4302540.6954788/1‑94 (MQ=60)
                                                            CGCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATG                                   >  SRR4302540.4065777/1‑94 (MQ=60)
                                                             GCCTCTTCCGGGCTCATACCTTCCACTTTGACGCCCATAACGCGCCCGATATCGCGATACTTTTCACCGGTACAGACAGCGTTATAACGgacga                                  >  SRR4302540.9130306/1‑89 (MQ=60)
                                                             GCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGA                                  >  SRR4302540.2299108/1‑94 (MQ=60)
                                                             GCCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGA                                  <  SRR4302540.4830090/94‑1 (MQ=60)
                                                              CCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGAC                                 >  SRR4302540.1332396/1‑94 (MQ=60)
                                                              CCTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGAC                                 >  SRR4302540.1332395/1‑94 (MQ=60)
                                                               CTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACA                                >  SRR4302540.1975845/1‑94 (MQ=60)
                                                               CTCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACA                                <  SRR4302540.9515390/94‑1 (MQ=60)
                                                                ctcttcaggctccatccttcccccTTCACCCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAT                               <  SRR4302540.8437726/70‑1 (MQ=60)
                                                                TCTTCCAGGCTCATTCCTTCCGATTTCGCACCCATAGCGCGCGCGATATCGCGGTACTTCTAACCGGTAAAGTCAGCGTTATAACGCATGACAT                               <  SRR4302540.8437727/94‑1 (MQ=60)
                                                                TCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAT                               <  SRR4302540.2076179/94‑1 (MQ=60)
                                                                TCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAT                               <  SRR4302540.6299524/94‑1 (MQ=60)
                                                                TCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAT                               <  SRR4302540.3099138/94‑1 (MQ=60)
                                                                TCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAT                               >  SRR4302540.3362/1‑94 (MQ=60)
                                                                TCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAT                               <  SRR4302540.2115236/94‑1 (MQ=60)
                                                                TCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAT                               <  SRR4302540.797038/94‑1 (MQ=60)
                                                                TCTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAT                               <  SRR4302540.3098836/94‑1 (MQ=60)
                                                                 CTTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATG                              >  SRR4302540.5002310/1‑94 (MQ=60)
                                                                  TTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGC                             <  SRR4302540.8678511/94‑1 (MQ=60)
                                                                  TTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGC                             <  SRR4302540.9779753/94‑1 (MQ=60)
                                                                  TTCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGC                             <  SRR4302540.2814880/94‑1 (MQ=60)
                                                                   TCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCG                            <  SRR4302540.4134141/94‑1 (MQ=60)
                                                                   TCCAGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCG                            >  SRR4302540.1429680/1‑94 (MQ=60)
                                                                      AGGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTA                         <  SRR4302540.8939166/94‑1 (MQ=60)
                                                                       GGCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAA                        >  SRR4302540.8657506/1‑94 (MQ=60)
                                                                        GCTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAAC                       <  SRR4302540.7551719/94‑1 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATACCGCATGACATGCGGTCACA                      >  SRR4302540.276714/1‑94 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACA                      >  SRR4302540.6903269/1‑94 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACA                      <  SRR4302540.2002346/94‑1 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACA                      >  SRR4302540.2101326/1‑94 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACA                      <  SRR4302540.2332121/94‑1 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACA                      >  SRR4302540.8684257/1‑94 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACA                      <  SRR4302540.4089780/94‑1 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACA                      >  SRR4302540.485808/1‑94 (MQ=60)
                                                                         CTCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACA                      >  SRR4302540.10094902/1‑94 (MQ=60)
                                                                          TCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAG                     >  SRR4302540.6260046/1‑94 (MQ=60)
                                                                          TCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAG                     >  SRR4302540.2629986/1‑94 (MQ=60)
                                                                          TCATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGCACTTCTCACCGGTAAAGTCAGCGCTATAACGCATGACATGCGGTAACAG                     >  SRR4302540.2654856/1‑94 (MQ=60)
                                                                           CATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGG                    >  SRR4302540.5666721/1‑94 (MQ=60)
                                                                            ATACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGA                   >  SRR4302540.7172962/1‑94 (MQ=60)
                                                                             TACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCGTGACATGCGGTAACAcgct                  >  SRR4302540.1325639/1‑90 (MQ=60)
                                                                             TACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCGTGACATGCGGTAACAGGAT                  >  SRR4302540.1325641/1‑94 (MQ=60)
                                                                             TACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGAT                  <  SRR4302540.4187938/94‑1 (MQ=60)
                                                                              TCCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATG                 <  SRR4302540.7813390/94‑1 (MQ=60)
                                                                              CCCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATG                 <  SRR4302540.4473802/94‑1 (MQ=60)
                                                                              ACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATG                 <  SRR4302540.9016806/94‑1 (MQ=60)
                                                                              ACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATG                 <  SRR4302540.7907681/94‑1 (MQ=60)
                                                                              ACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATG                 <  SRR4302540.4901323/94‑1 (MQ=60)
                                                                              ACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATG                 <  SRR4302540.6036420/94‑1 (MQ=60)
                                                                              ACCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGCAACAGGATG                 >  SRR4302540.7445819/1‑94 (MQ=60)
                                                                               CCTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGG                >  SRR4302540.7990860/1‑94 (MQ=60)
                                                                                CTTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGC               <  SRR4302540.1173797/94‑1 (MQ=60)
                                                                                CTTCCACTATCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGC               <  SRR4302540.8675667/94‑1 (MQ=60)
                                                                                 TTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCG              >  SRR4302540.3956440/1‑94 (MQ=60)
                                                                                 TTCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCG              >  SRR4302540.3438526/1‑94 (MQ=60)
                                                                                  TCCACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGT             >  SRR4302540.1789553/1‑94 (MQ=60)
                                                                                   CCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTT            <  SRR4302540.2288150/94‑1 (MQ=60)
                                                                                    CACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTC           <  SRR4302540.7688508/94‑1 (MQ=60)
                                                                                    CACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTC           <  SRR4302540.7421825/94‑1 (MQ=60)
                                                                                    CACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTC           >  SRR4302540.7900305/1‑94 (MQ=60)
                                                                                    CACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTC           <  SRR4302540.568845/94‑1 (MQ=60)
                                                                                    CACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTC           <  SRR4302540.7365287/94‑1 (MQ=60)
                                                                                    CACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACAGGCGGTAACAGGATGGCGTTC           <  SRR4302540.6075800/94‑1 (MQ=60)
                                                                                     ACTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCG          >  SRR4302540.9092745/1‑94 (MQ=60)
                                                                                      CTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGC         >  SRR4302540.7855708/1‑94 (MQ=60)
                                                                                      CTTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGCCGTTCGA         >  SRR4302540.7855709/1‑94 (MQ=60)
                                                                                       TTTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCA        >  SRR4302540.7416633/1‑94 (MQ=60)
                                                                                        TTCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAA       >  SRR4302540.3941015/1‑94 (MQ=60)
                                                                                         TCACACCCATAACGCGCGCGATATCGCGGTTATTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAAC      <  SRR4302540.10023603/94‑1 (MQ=60)
                                                                                         TCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAAC      <  SRR4302540.1824324/94‑1 (MQ=60)
                                                                                         TCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAAC      <  SRR4302540.10023602/94‑1 (MQ=60)
                                                                                         TCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAAC      <  SRR4302540.10083281/94‑1 (MQ=60)
                                                                                         TCACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTAGAACGCATGACATGCGGTAACAGGATGGCGTTCGCAAC      <  SRR4302540.10023601/94‑1 (MQ=60)
                                                                                          CACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACC     >  SRR4302540.5836290/1‑94 (MQ=60)
                                                                                          CACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACA     <  SRR4302540.941178/94‑1 (MQ=60)
                                                                                          CACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACA     >  SRR4302540.5836289/1‑94 (MQ=60)
                                                                                           ACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACAC    <  SRR4302540.5147067/94‑1 (MQ=60)
                                                                                           ACACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACAC    <  SRR4302540.9073278/94‑1 (MQ=60)
                                                                                            CACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCTGCGTTATAACGCCGGACATGCGGTAACAGGATGGagtgcgccagccg   >  SRR4302540.6233286/1‑81 (MQ=60)
                                                                                            CACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACACC   <  SRR4302540.311520/94‑1 (MQ=60)
                                                                                            CACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACACC   <  SRR4302540.2322414/94‑1 (MQ=60)
                                                                                            CACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAAAACC   <  SRR4302540.1763387/94‑1 (MQ=60)
                                                                                             GCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACACCG  >  SRR4302540.6048849/1‑94 (MQ=60)
                                                                                             ACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACTCATGACATGCGGTAACAGGATGGCGTTCGCAACACCG  <  SRR4302540.4888270/94‑1 (MQ=60)
                                                                                             ACCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACACCG  >  SRR4302540.1785445/1‑94 (MQ=60)
                                                                                             |                                                                                             
ATGTGGCGGAATACCGACATCACGGTTGAGAGCAAACACCGCTTCAACAGCGGCATTACGCGCCTCTTCCAGGCTCATACCTTCCACTTTCACGCCCATAACGCGCGCGATATCGCGGTACTTCTCACCGGTAAAGTCAGCGTTATAACGCATGACATGCGGTAACAGGATGGCGTTCGCAACACCG  >  NC_000913/2930022‑2930208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑