Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,947,112	T→C	intergenic (‑80/‑152)	b2817 ← / → argA	putative amidase/N‑acetylglutamate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,947,112	0	T	C	100.0%	1977.0 / NA	601	intergenic (‑80/‑152)	b2817/argA	putative amidase/N‑acetylglutamate synthase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (321/280); total (321/280)

Only 100 of 611 total aligned reads displayed.

GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC  >  NC_000913/2947022‑2947201

gATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACaa                                                                                         <  1:9807733/93‑1 (MQ=255)

  tCCTGACATGACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc                                                                                       <  2:3912281/93‑1 (MQ=255)

    cTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTg                                                                                     >  1:7586404/1‑93 (MQ=255)

      gACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTc                                                                                   >  1:4871138/1‑93 (MQ=255)

       aCATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCa                                                                                  <  1:4475000/93‑1 (MQ=255)

       aCATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCa                                                                                  <  1:9889853/93‑1 (MQ=255)

        cATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAt                                                                                 >  1:5518633/1‑93 (MQ=255)

        cATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGCAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAt                                                                                 <  2:2482999/93‑1 (MQ=255)

         aTGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc                                                                                >  2:487945/1‑93 (MQ=255)

         aTGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc                                                                                <  2:7045787/93‑1 (MQ=255)

         aTGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc                                                                                <  1:9469118/93‑1 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  2:2022290/1‑93 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:6713151/1‑93 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:6401799/1‑93 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:8587211/1‑93 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:2328680/1‑93 (MQ=255)

           gCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCta                                                                              >  1:8812381/1‑93 (MQ=255)

            ccTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaa                                                                             >  2:2277869/1‑93 (MQ=255)

             ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat                                                                            <  1:4095773/93‑1 (MQ=255)

              tctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaata                                                                           >  2:8064130/1‑93 (MQ=255)

               ctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaataa                                                                          <  1:2226387/93‑1 (MQ=255)

                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         >  1:5030862/1‑93 (MQ=255)

                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         <  2:6136051/93‑1 (MQ=255)

                  ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg                                                                       <  1:2003851/93‑1 (MQ=255)

                  ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg                                                                       >  2:3589079/1‑93 (MQ=255)

                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  2:4031849/1‑93 (MQ=255)

                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  1:1525903/1‑93 (MQ=255)

                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  1:1690826/1‑93 (MQ=255)

                    gAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGt                                                                     <  2:1169475/93‑1 (MQ=255)

                    gAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGt                                                                     >  1:5229943/1‑93 (MQ=255)

                    gAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGt                                                                     >  1:4695111/1‑93 (MQ=255)

                     aGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTa                                                                    >  2:9151857/1‑93 (MQ=255)

                     aGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTa                                                                    >  2:9696961/1‑93 (MQ=255)

                     aGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTa                                                                    <  2:10009222/93‑1 (MQ=255)

                       cAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaaa                                                                  >  2:5743518/1‑93 (MQ=255)

                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCGCAATCTGTCATCTAATAAACGGTAAAc                                                                 >  2:7505225/1‑93 (MQ=255)

                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaaat                                                                 <  1:7431155/93‑2 (MQ=255)

                          aaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAt                                                               <  1:387973/93‑1 (MQ=255)

                          aaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAt                                                               <  2:2810453/93‑1 (MQ=255)

                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTATCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              <  2:3061288/93‑1 (MQ=255)

                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              <  1:6942215/93‑1 (MQ=255)

                             aaaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCt                                                            >  2:6757756/1‑93 (MQ=255)

                               aTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttt                                                          <  1:9244016/93‑1 (MQ=255)

                                tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt                                                         >  2:4573086/1‑93 (MQ=255)

                                tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt                                                         <  2:8297434/93‑1 (MQ=255)

                                tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt                                                         <  1:1024031/93‑1 (MQ=255)

                                 cTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTTATCTAATAAACGGTAAACATTCttttt                                                        <  2:9502341/93‑1 (MQ=255)

                                 cTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttttt                                                        <  2:1543392/93‑1 (MQ=255)

                                  tAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTta                                                       >  2:7688107/1‑93 (MQ=255)

                                   aaGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtat                                                      <  2:7826853/93‑1 (MQ=255)

                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     >  1:4789192/1‑93 (MQ=255)

                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     <  1:7321361/93‑1 (MQ=255)

                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     <  1:6127120/93‑1 (MQ=255)

                                     gCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTatat                                                    >  1:7171882/1‑93 (MQ=255)

                                      cTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAtt                                                   <  2:7174338/93‑1 (MQ=255)

                                        gtgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCa                                                 <  2:9822280/93‑1 (MQ=255)

                                         tgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAc                                                >  2:1696391/1‑93 (MQ=255)

                                         tgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAc                                                >  1:1892736/1‑93 (MQ=255)

                                          gtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACg                                               <  2:56159/93‑1 (MQ=255)

                                           tAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACgg                                              >  1:3357926/1‑93 (MQ=255)

                                           tAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACgg                                              >  2:9340510/1‑93 (MQ=255)

                                              cAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAt                                           <  1:3654648/93‑1 (MQ=255)

                                              cAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAt                                           <  2:3489687/93‑1 (MQ=255)

                                                aGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTa                                         >  2:1277248/1‑93 (MQ=255)

                                                 gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGCAAACATTCTTTTTATATTCACGGCATTAc                                        >  1:1337294/1‑93 (MQ=255)

                                                  tAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACt                                       >  2:5916537/1‑93 (MQ=255)

                                                    aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa                                     <  1:2854230/93‑1 (MQ=255)

                                                       gACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaa                                  <  2:2975383/93‑1 (MQ=255)

                                                          tAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaa                               <  2:1860345/93‑1 (MQ=255)

                                                          tAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaa                               >  1:4401853/1‑93 (MQ=255)

                                                          tAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaa                               >  2:6647570/1‑93 (MQ=255)

                                                           aaTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaaa                              <  2:859759/93‑1 (MQ=255)

                                                           aaTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaaa                              <  1:2700530/93‑1 (MQ=255)

                                                            aTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAg                             >  1:8118275/1‑93 (MQ=255)

                                                             tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt                            <  2:4762247/93‑1 (MQ=255)

                                                             tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt                            <  1:7664029/93‑1 (MQ=255)

                                                              ttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTc                           <  1:5968323/93‑1 (MQ=255)

                                                              ttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTc                           >  2:2663117/1‑93 (MQ=255)

                                                                gACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGc                         <  1:3076704/93‑1 (MQ=255)

                                                                 aCCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGct                        >  1:782998/1‑93 (MQ=255)

                                                                  ccGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctc                       >  1:4000295/1‑93 (MQ=255)

                                                                   cgaaaaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctct                      <  2:8954921/90‑1 (MQ=255)

                                                                   cGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctct                      <  1:962253/93‑1 (MQ=255)

                                                                   cGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctct                      >  2:9039876/1‑93 (MQ=255)

                                                                      aaaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGc                   >  1:9040156/1‑93 (MQ=255)

                                                                        aCTTTAGCGAAAGACGCACCATCTGTCATCTATTAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTAGCTCTCGCAt                 >  1:5359251/1‑93 (MQ=255)

                                                                         cTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATa                <  1:8315462/93‑1 (MQ=255)

                                                                          tttAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATaa               <  1:4206049/93‑1 (MQ=255)

                                                                             aGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAt            <  2:7314530/93‑1 (MQ=255)

                                                                             aGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAt            <  2:5118611/93‑1 (MQ=255)

                                                                              gCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAtt           <  2:5340938/93‑1 (MQ=255)

                                                                                 aaaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTac        >  2:6445374/1‑93 (MQ=255)

                                                                                  aaGACGCCACATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCGCGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  1:5840484/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  1:1296981/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  1:3137284/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  2:6327608/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       >  2:4247092/1‑93 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       >  2:2124145/1‑93 (MQ=255)

                                                                                       gCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGc  >  2:8444679/1‑93 (MQ=255)

                                                                                       gCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGc  >  2:4418187/1‑93 (MQ=255)

GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC  >  NC_000913/2947022‑2947201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 323 total aligned reads displayed.

TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  >  NC_000913/2947019‑2947205

TTGGATCCTGACATGCCTCTCCCGAGCAAACGACATCTCAGCTGTGTAACAAGTAAACGACTACTTTGACCGGAAACTTTAGCGAAAGACGCAC                                                                                               >  SRR4302540.9819145/1‑94 (MQ=60)

TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCAC                                                                                               <  SRR4302540.3852545/94‑1 (MQ=60)

TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCAC                                                                                               >  SRR4302540.9819146/1‑94 (MQ=60)

  GCATCCTGACATGCCGCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAA                                                                                             <  SRR4302540.1970788/94‑1 (MQ=60)

   GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAAT                                                                                            <  SRR4302540.8493381/94‑1 (MQ=60)

    ATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC                                                                                           >  SRR4302540.7569209/1‑94 (MQ=60)

    ATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC                                                                                           <  SRR4302540.3575707/94‑1 (MQ=60)

    ATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC                                                                                           <  SRR4302540.5034206/94‑1 (MQ=60)

    ATCCTGACATGACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC                                                                                           >  SRR4302540.9453380/1‑94 (MQ=60)

     TCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCT                                                                                          >  SRR4302540.635471/1‑94 (MQ=60)

     TCCTGACATGACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCT                                                                                          <  SRR4302540.4897510/94‑1 (MQ=60)

     TCCTGACATGACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCT                                                                                          <  SRR4302540.4897511/94‑1 (MQ=60)

      CCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTG                                                                                         <  SRR4302540.4774077/94‑1 (MQ=60)

       CTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGT                                                                                        >  SRR4302540.1580236/1‑94 (MQ=60)

       CTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGT                                                                                        >  SRR4302540.1769064/1‑94 (MQ=60)

        TGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTC                                                                                       <  SRR4302540.4478002/94‑1 (MQ=60)

        TGACATGACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTC                                                                                       <  SRR4302540.3225794/94‑1 (MQ=60)

         GCCATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCA                                                                                      <  SRR4302540.2022932/94‑1 (MQ=60)

         GACATGACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCA                                                                                      <  SRR4302540.4427448/94‑1 (MQ=60)

          ACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAT                                                                                     <  SRR4302540.10005330/94‑1 (MQ=60)

          ACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAT                                                                                     >  SRR4302540.5579416/1‑94 (MQ=60)

          ACATGACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAT                                                                                     <  SRR4302540.2428050/94‑1 (MQ=60)

           CATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATC                                                                                    <  SRR4302540.7685694/94‑1 (MQ=60)

            ATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCT                                                                                   >  SRR4302540.5941997/1‑94 (MQ=60)

            ATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCT                                                                                   >  SRR4302540.8687037/1‑94 (MQ=60)

            ATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCT                                                                                   >  SRR4302540.1189579/1‑94 (MQ=60)

            ATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCT                                                                                   >  SRR4302540.6473054/1‑94 (MQ=60)

            ATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCT                                                                                   <  SRR4302540.9581439/94‑1 (MQ=60)

             TGCCTCTCCCGAGCACAAGCAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTA                                                                                  <  SRR4302540.9093646/94‑1 (MQ=60)

             TGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTA                                                                                  >  SRR4302540.4560348/1‑94 (MQ=60)

             TGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTA                                                                                  >  SRR4302540.8914267/1‑94 (MQ=60)

              GCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCTGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAA                                                                                 >  SRR4302540.480569/1‑94 (MQ=60)

              GCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAA                                                                                 <  SRR4302540.3229441/94‑1 (MQ=60)

              GACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAA                                                                                 <  SRR4302540.447727/94‑1 (MQ=60)

               CCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGCCCGGAAACTTTACCAAAAGACGCACAATCTGTCATCTAAT                                                                                <  SRR4302540.7333827/94‑1 (MQ=60)

                CTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATA                                                                               >  SRR4302540.7558245/1‑94 (MQ=60)

                CTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATA                                                                               >  SRR4302540.1945376/1‑94 (MQ=60)

                CTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATA                                                                               >  SRR4302540.10095382/1‑94 (MQ=60)

                CGCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGACACTTTAGCGAAAGACGCACAATCTGTCATCTAATA                                                                               <  SRR4302540.4139955/94‑1 (MQ=60)

                 TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302540.8007304/94‑1 (MQ=60)

                 TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              >  SRR4302540.1813398/1‑94 (MQ=60)

                 TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302540.5179437/94‑1 (MQ=60)

                 TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302540.768952/94‑1 (MQ=60)

                 TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302540.551469/94‑1 (MQ=60)

                 TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGGCATCTAATAA                                                                              <  SRR4302540.4983505/94‑1 (MQ=60)

                 TCGCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302540.8007305/94‑1 (MQ=60)

                  CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             >  SRR4302540.5085303/1‑94 (MQ=60)

                  CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             >  SRR4302540.2012563/1‑94 (MQ=60)

                  CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             <  SRR4302540.2250376/94‑1 (MQ=60)

                  CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             >  SRR4302540.9877504/1‑94 (MQ=60)

                   TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC                                                                            <  SRR4302540.2071134/94‑1 (MQ=60)

                   TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC                                                                            <  SRR4302540.6922208/94‑1 (MQ=60)

                   TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC                                                                            <  SRR4302540.2245531/94‑1 (MQ=60)

                    CCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACG                                                                           >  SRR4302540.7339253/1‑94 (MQ=60)

                     CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG                                                                          >  SRR4302540.1542804/1‑94 (MQ=60)

                     CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG                                                                          >  SRR4302540.1709161/1‑94 (MQ=60)

                      CGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGT                                                                         >  SRR4302540.4745304/1‑94 (MQ=60)

                       GAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTA                                                                        <  SRR4302540.4681160/94‑1 (MQ=60)

                          CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     <  SRR4302540.7819861/94‑1 (MQ=60)

                          CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     <  SRR4302540.4511952/94‑1 (MQ=60)

                          CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     <  SRR4302540.7835834/94‑1 (MQ=60)

                          CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     >  SRR4302540.6800145/1‑94 (MQ=60)

                          CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     >  SRR4302540.3520309/1‑94 (MQ=60)

                           AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    >  SRR4302540.10023471/1‑94 (MQ=60)

                           AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    <  SRR4302540.5365046/94‑1 (MQ=60)

                           AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    >  SRR4302540.3073011/1‑94 (MQ=60)

                           AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    <  SRR4302540.465866/94‑1 (MQ=60)

                           AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    >  SRR4302540.1802403/1‑94 (MQ=60)

                           AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    <  SRR4302540.4154340/94‑1 (MQ=60)

                           AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGCAAACA                                                                    >  SRR4302540.227683/1‑94 (MQ=60)

                            AAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAT                                                                   <  SRR4302540.3731394/94‑1 (MQ=60)

                            AAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAT                                                                   >  SRR4302540.3158683/1‑94 (MQ=60)

                             AAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATT                                                                  >  SRR4302540.3891446/1‑94 (MQ=60)

                             AAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATT                                                                  >  SRR4302540.8723798/1‑94 (MQ=60)

                             AAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATT                                                                  <  SRR4302540.391990/94‑1 (MQ=60)

                              AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTC                                                                 <  SRR4302540.7019496/94‑1 (MQ=60)

                              AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTC                                                                 <  SRR4302540.1133852/94‑1 (MQ=60)

                               GAACTCTAAGCTGTGTAAACAGTCCACGCCTAATTTGCCCGGAAACTTTAGCGAAAGACGCACAATCTGTCAACTAATAAACGGTAAACATTCT                                                                <  SRR4302540.9078001/94‑1 (MQ=55)

                                AAATCTAAGCTTTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTT                                                               <  SRR4302540.8662123/94‑1 (MQ=60)

                                 AATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTT                                                              >  SRR4302540.9780253/1‑94 (MQ=60)

                                  ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT                                                             <  SRR4302540.9354715/94‑1 (MQ=60)

                                  ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT                                                             >  SRR4302540.8252104/1‑94 (MQ=60)

                                  ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT                                                             <  SRR4302540.2803835/94‑1 (MQ=60)

                                  ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT                                                             >  SRR4302540.7471957/1‑94 (MQ=60)

                                   TCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTT                                                            <  SRR4302540.6750224/94‑1 (MQ=60)

                                    CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           >  SRR4302540.6255935/1‑94 (MQ=60)

                                    CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           >  SRR4302540.6610708/1‑94 (MQ=60)

                                    CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           >  SRR4302540.9645866/1‑94 (MQ=60)

                                      AAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATT                                                         >  SRR4302540.9976095/1‑94 (MQ=60)

                                      AAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATA                                                         <  SRR4302540.7705278/94‑1 (MQ=60)

                                      AAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATA                                                         >  SRR4302540.4840411/1‑94 (MQ=60)

                                       AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        <  SRR4302540.7403128/94‑1 (MQ=60)

                                       AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        >  SRR4302540.7251825/1‑94 (MQ=60)

                                       AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        <  SRR4302540.4953413/94‑1 (MQ=60)

                                       AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        <  SRR4302540.6195361/94‑1 (MQ=60)

                                         CTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTC                                                      >  SRR4302540.54554/1‑94 (MQ=60)

                                         CTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTC                                                      >  SRR4302540.7786082/1‑94 (MQ=60)

                                          TGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCA                                                     >  SRR4302540.2723815/1‑94 (MQ=60)

                                          TGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCA                                                     <  SRR4302540.8139224/94‑1 (MQ=60)

                                          TGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCA                                                     >  SRR4302540.6151350/1‑94 (MQ=60)

                                          TGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCA                                                     <  SRR4302540.7597662/94‑1 (MQ=60)

                                          TGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCA                                                     >  SRR4302540.4081039/1‑94 (MQ=60)

                                           GTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAC                                                    <  SRR4302540.9231357/94‑1 (MQ=60)

                                           GTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAC                                                    >  SRR4302540.1913454/1‑94 (MQ=60)

                                           GTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAC                                                    <  SRR4302540.5975481/94‑1 (MQ=60)

                                            TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG                                                   <  SRR4302540.9114684/94‑1 (MQ=60)

                                            TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG                                                   <  SRR4302540.9937924/94‑1 (MQ=60)

                                            TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG                                                   <  SRR4302540.60050/94‑1 (MQ=60)

                                             GTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGG                                                  >  SRR4302540.745386/1‑94 (MQ=60)

                                             GTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGG                                                  <  SRR4302540.4861406/94‑1 (MQ=60)

                                             GTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGG                                                  >  SRR4302540.2331979/1‑94 (MQ=60)

                                             GTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGG                                                  >  SRR4302540.3394707/1‑94 (MQ=60)

                                             GTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGG                                                  >  SRR4302540.3290436/1‑94 (MQ=60)

                                             GTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGG                                                  <  SRR4302540.1691682/94‑1 (MQ=60)

                                                ACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAT                                               <  SRR4302540.9494942/94‑1 (MQ=60)

                                                ACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGACAT                                               >  SRR4302540.9728186/1‑94 (MQ=60)

                                                 CAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAaagcgctagatcggaagagcggtt                                              >  SRR4302540.415740/1‑70 (MQ=60)

                                                 CAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATT                                              <  SRR4302540.3694677/94‑1 (MQ=60)

                                                 CAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATT                                              <  SRR4302540.6629211/94‑1 (MQ=60)

                                                  AAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTA                                             >  SRR4302540.4147118/1‑94 (MQ=60)

                                                  AAGTAAACGACTAATTTGACAGGAAACTTTAGCGAAAGACGCCCAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTA                                             <  SRR4302540.7671051/94‑1 (MQ=60)

                                                   AGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAC                                            >  SRR4302540.8445770/1‑94 (MQ=60)

                                                   AGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAC                                            >  SRR4302540.1351293/1‑94 (MQ=60)

                                                   AGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAC                                            >  SRR4302540.4839035/1‑94 (MQ=60)

                                                   AGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGCAAACATTCTTTTTATATTCACGGCATTAC                                            >  SRR4302540.1351294/1‑94 (MQ=60)

                                                    GTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACT                                           >  SRR4302540.7287925/1‑94 (MQ=60)

                                                     TAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTG                                          >  SRR4302540.212876/1‑94 (MQ=60)

                                                      AAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGA                                         >  SRR4302540.5857290/1‑94 (MQ=60)

                                                      AAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGA                                         <  SRR4302540.7096545/94‑1 (MQ=60)

                                                       AACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGAT                                        >  SRR4302540.3136196/1‑94 (MQ=60)

                                                       AACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGAT                                        >  SRR4302540.4018010/1‑94 (MQ=60)

                                                       AACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGAT                                        <  SRR4302540.2885158/94‑1 (MQ=60)

                                                        ACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATA                                       >  SRR4302540.5345225/1‑94 (MQ=60)

                                                         CGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAA                                      >  SRR4302540.4036972/1‑94 (MQ=60)

                                                         CGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAA                                      <  SRR4302540.286036/94‑1 (MQ=60)

                                                            CTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAA                                   >  SRR4302540.5320326/1‑94 (MQ=60)

                                                            CTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAA                                   >  SRR4302540.3099704/1‑94 (MQ=60)

                                                             TAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAA                                  >  SRR4302540.704262/1‑94 (MQ=60)

                                                              AATTTGACCGGAAACTTTAGCGAAAGACTCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG                                 >  SRR4302540.7510922/1‑94 (MQ=60)

                                                              AATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG                                 <  SRR4302540.2729674/94‑1 (MQ=60)

                                                              AATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG                                 >  SRR4302540.8212488/1‑94 (MQ=60)

                                                              AATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG                                 >  SRR4302540.5808230/1‑94 (MQ=60)

                                                               ATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGT                                >  SRR4302540.5172519/1‑94 (MQ=60)

                                                                TTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTC                               <  SRR4302540.9167439/94‑1 (MQ=60)

                                                                 TTGACCGGAATCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCG                              <  SRR4302540.5272127/94‑1 (MQ=60)

                                                                  TGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGC                             >  SRR4302540.439803/1‑94 (MQ=60)

                                                                   GACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCT                            <  SRR4302540.3110461/94‑1 (MQ=60)

                                                                   GACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCT                            >  SRR4302540.791328/1‑94 (MQ=60)

                                                                    ACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTC                           >  SRR4302540.4043343/1‑94 (MQ=60)

                                                                     ccgaaaactggaggtAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCT                          <  SRR4302540.1421687/79‑1 (MQ=60)

                                                                     CCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCT                          <  SRR4302540.10080907/94‑1 (MQ=60)

                                                                     CCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCT                          >  SRR4302540.6068224/1‑94 (MQ=60)

                                                                     CCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCT                          <  SRR4302540.3949796/94‑1 (MQ=60)

                                                                     CCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCT                          >  SRR4302540.4509686/1‑94 (MQ=60)

                                                                      CGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTC                         >  SRR4302540.5470244/1‑94 (MQ=60)

                                                                       GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        >  SRR4302540.9781477/1‑94 (MQ=60)

                                                                       GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        <  SRR4302540.1577881/94‑1 (MQ=60)

                                                                        GAACCTTTAGCGAAAGACGCACAATCTGTCATCTAATAACCGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGC                       <  SRR4302540.4073056/94‑1 (MQ=60)

                                                                        GAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGC                       >  SRR4302540.8398710/1‑94 (MQ=60)

                                                                        GAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGC                       >  SRR4302540.9148668/1‑94 (MQ=60)

                                                                        GAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGC                       >  SRR4302540.6828379/1‑94 (MQ=60)

                                                                        GAAACTTTAGCGAAAGACGCACAATCTGTAATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGC                       >  SRR4302540.7522443/1‑94 (MQ=60)

                                                                         AAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCA                      >  SRR4302540.1433157/1‑94 (MQ=60)

                                                                          AACTTTAGCGAAAGACGCACCATCTGTCATCTATTAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTAGCTCTCGCAT                     >  SRR4302540.5418113/1‑94 (MQ=60)

                                                                            CTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAA                   >  SRR4302540.132555/1‑94 (MQ=60)

                                                                             TTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAA                  >  SRR4302540.10013925/1‑94 (MQ=60)

                                                                             TTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAA                  >  SRR4302540.9487970/1‑94 (MQ=60)

                                                                             TTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAA                  >  SRR4302540.2346296/1‑94 (MQ=60)

                                                                              TTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAA                 >  SRR4302540.4255563/1‑94 (MQ=60)

                                                                               TAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAT                >  SRR4302540.1508174/1‑94 (MQ=60)

                                                                               TAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAT                <  SRR4302540.8357270/94‑1 (MQ=60)

                                                                                AGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATT               >  SRR4302540.2192902/1‑94 (MQ=60)

                                                                                  CGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCGTTACTGATAAAAAAGTCGCTCTCGCATAAAATTTA             >  SRR4302540.7739268/1‑94 (MQ=60)

                                                                                  CGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTA             >  SRR4302540.3728769/1‑94 (MQ=60)

                                                                                  CGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTA             >  SRR4302540.9651194/1‑94 (MQ=60)

                                                                                  CGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTA             <  SRR4302540.4987485/94‑1 (MQ=60)

                                                                                   GAAAGACGCACAATCTGTCATCTAATAGACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            >  SRR4302540.7108608/1‑94 (MQ=60)

                                                                                   GAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            <  SRR4302540.9944948/94‑1 (MQ=60)

                                                                                   GAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            >  SRR4302540.9308903/1‑94 (MQ=60)

                                                                                   GAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            <  SRR4302540.2866328/94‑1 (MQ=60)

                                                                                   GAAACACTCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            <  SRR4302540.6165452/94‑1 (MQ=60)

                                                                                    AAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACA           <  SRR4302540.2615186/94‑1 (MQ=60)

                                                                                     AAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACAC          <  SRR4302540.1310416/94‑1 (MQ=60)

                                                                                     AAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACAC          <  SRR4302540.2898630/94‑1 (MQ=60)

                                                                                     AAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACAC          <  SRR4302540.578449/94‑1 (MQ=60)

                                                                                      AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         >  SRR4302540.5857964/1‑94 (MQ=60)

                                                                                      AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         >  SRR4302540.418439/1‑94 (MQ=60)

                                                                                      AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         >  SRR4302540.6205663/1‑94 (MQ=60)

                                                                                      AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         <  SRR4302540.3659864/94‑1 (MQ=60)

                                                                                      AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         >  SRR4302540.3132220/1‑94 (MQ=60)

                                                                                        ACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTG       >  SRR4302540.9586185/1‑94 (MQ=60)

                                                                                         CGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAACAAGTCGCTCTCGCATAAAATTTACACTTGC      >  SRR4302540.1051241/1‑94 (MQ=60)

                                                                                         CGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC      <  SRR4302540.8864539/94‑1 (MQ=60)

                                                                                         CGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC      >  SRR4302540.7189500/1‑94 (MQ=60)

                                                                                         CGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC      >  SRR4302540.1311328/1‑94 (MQ=60)

                                                                                          GCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCA     >  SRR4302540.4447428/1‑94 (MQ=60)

                                                                                            ACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACC   >  SRR4302540.4053230/1‑94 (MQ=60)

                                                                                             CAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  <  SRR4302540.2563384/94‑1 (MQ=60)

                                                                                             CAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  <  SRR4302540.8887175/94‑1 (MQ=60)

                                                                                             CAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  >  SRR4302540.1218642/1‑94 (MQ=60)

TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  >  NC_000913/2947019‑2947205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`