Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,953,377 T→C T217A (ACG→GCG)  recB ← RecB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,953,3770TC99.7% 1039.1 / ‑5.1 321T217A (ACG→GCG) recBRecB
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (142/178);  total (142/179)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.98e-01

Only 100 of 340 total aligned reads displayed.

TCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGTTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCC  >  NC_000913/2953287‑2953466
                                                                                          |                                                                                         
tCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGctt                                                                                         >  2:3092086/1‑93 (MQ=255)
tCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGctt                                                                                         <  1:6844077/93‑1 (MQ=255)
tCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGctt                                                                                         >  2:9143067/1‑93 (MQ=255)
tCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGctt                                                                                         >  1:5004858/1‑93 (MQ=255)
tCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGctt                                                                                         >  2:3792513/1‑93 (MQ=255)
 cAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTtc                                                                                        <  2:366833/93‑1 (MQ=255)
 cAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTtc                                                                                        <  2:1721046/93‑1 (MQ=255)
   gcgcATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTtcat                                                                                      <  2:4436316/93‑1 (MQ=255)
     gcATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTtcatca                                                                                    >  1:8521315/1‑93 (MQ=255)
       aTCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCatcatc                                                                                  <  2:5335604/93‑1 (MQ=255)
       aTCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCatcatc                                                                                  >  2:1452621/1‑93 (MQ=255)
        tCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCg                                                                                 >  1:7674122/1‑93 (MQ=255)
        tCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCg                                                                                 >  2:454252/1‑93 (MQ=255)
         cgaGTTCACCCCCTGCGTGGCGCCAGTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCgg                                                                                <  2:7007653/91‑1 (MQ=255)
         ccAGTTCACCCGCTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCgg                                                                                <  1:9416277/93‑1 (MQ=255)
         ccAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCgg                                                                                >  1:2859777/1‑93 (MQ=255)
           aGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGggc                                                                              >  1:1732103/1‑93 (MQ=255)
             ttCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGggcgg                                                                            >  2:3271759/1‑93 (MQ=255)
              tCACCCACTGCGTCGCGTCACTGCTGTTTTGCCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCACCGCTTCATCATCGggcggc                                                                           >  1:7522167/1‑93 (MQ=255)
              tCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGggcggc                                                                           <  1:3853673/93‑1 (MQ=255)
               cACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGgcggcg                                                                          <  2:2532337/93‑1 (MQ=255)
                 cccACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGt                                                                        <  1:1391897/93‑1 (MQ=255)
                     cTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAACCAGCGCTTCATCATCGGGCGGCGGTGCtt                                                                    >  1:9541074/1‑93 (MQ=255)
                      tGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCttt                                                                   >  1:479816/1‑93 (MQ=255)
                      tGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCttt                                                                   >  1:9021836/1‑93 (MQ=255)
                       gCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTg                                                                  <  1:9636716/93‑1 (MQ=255)
                          tCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATa                                                               <  1:4571354/93‑1 (MQ=255)
                          tCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATa                                                               >  2:9123440/1‑93 (MQ=255)
                            gcgcCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAAc                                                             <  2:5088981/93‑1 (MQ=255)
                             cgcCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAAcc                                                            >  2:6109796/1‑93 (MQ=255)
                              gcCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCg                                                           <  2:6397156/93‑1 (MQ=255)
                              gcCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCg                                                           >  2:3925960/1‑93 (MQ=255)
                               ccACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCgg                                                          >  2:6705716/1‑93 (MQ=255)
                               ccACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCgg                                                          <  2:6232910/93‑1 (MQ=255)
                                 aCTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGgcg                                                        <  1:1568731/93‑1 (MQ=255)
                                  ctgctgTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGgcgc                                                       >  1:1003436/1‑93 (MQ=255)
                                  ctgctgTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGgcgc                                                       >  2:8026767/1‑93 (MQ=255)
                                    gctgTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCtt                                                     >  1:9712488/1‑93 (MQ=255)
                                     ctgTTTTACTGTATCAATACGCGCCACATTTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGGGGCGGTGCTTTGATAACCGGCGCTTc                                                    <  2:8093483/93‑1 (MQ=255)
                                      tgTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCg                                                   >  2:9368058/1‑93 (MQ=255)
                                      tgTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCg                                                   >  2:1157972/1‑93 (MQ=255)
                                       gTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGc                                                  >  2:8060362/1‑93 (MQ=255)
                                       gTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGc                                                  >  1:3033630/1‑93 (MQ=255)
                                       gTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGc                                                  >  2:7068779/1‑93 (MQ=255)
                                        ttttACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGcc                                                 >  1:9060704/1‑93 (MQ=255)
                                         tttACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCt                                                <  2:6795047/93‑1 (MQ=255)
                                         tttACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCt                                                <  1:8830906/93‑1 (MQ=255)
                                         tttACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCt                                                >  1:7939489/1‑93 (MQ=255)
                                         tttACCGTAACAATCTGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCt                                                <  2:1634104/93‑1 (MQ=255)
                                          ttACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCtt                                               <  2:4918439/93‑1 (MQ=255)
                                            aCCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGc                                             <  1:7395655/93‑1 (MQ=255)
                                            aCCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGc                                             >  2:54309/1‑93 (MQ=255)
                                             ccGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATCACCGGCGCTTCGCCTTGCa                                            >  1:8134269/1‑93 (MQ=255)
                                             ccGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCa                                            <  1:5952543/93‑1 (MQ=255)
                                                tATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGAt                                         <  2:5878622/93‑1 (MQ=255)
                                                tATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGAt                                         <  1:3355766/93‑1 (MQ=255)
                                                tATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGAt                                         >  2:1289996/1‑93 (MQ=255)
                                                  tCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATaa                                       >  2:8334468/1‑93 (MQ=255)
                                                  tCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATaa                                       >  2:750438/1‑93 (MQ=255)
                                                  tCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATaa                                       >  1:1904685/1‑93 (MQ=255)
                                                  tCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATaa                                       <  1:9233464/93‑1 (MQ=255)
                                                    aaTACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACg                                     >  1:8159913/1‑93 (MQ=255)
                                                     aTACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGa                                    <  1:6777025/93‑1 (MQ=255)
                                                      tACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGAt                                   >  2:9621148/1‑93 (MQ=255)
                                                       aCGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGAtt                                  <  1:4394880/93‑1 (MQ=255)
                                                        cgcgCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTa                                 <  2:2741869/93‑1 (MQ=255)
                                                        cgcgCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTa                                 >  1:1109607/1‑93 (MQ=255)
                                                        cgcgCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTa                                 <  1:5423193/93‑1 (MQ=255)
                                                         gcgcCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTaa                                <  1:4819316/93‑1 (MQ=255)
                                                         gcgcCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTaa                                <  1:4847285/93‑1 (MQ=255)
                                                          cgcCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAat                               <  1:1883062/93‑1 (MQ=255)
                                                           gcCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCAGCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAata                              <  1:5119198/93‑1 (MQ=255)
                                                            ccACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAatat                             <  1:2207175/93‑1 (MQ=255)
                                                            ccACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAatat                             >  1:7969016/1‑93 (MQ=255)
                                                             cacaATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATc                            >  1:3626267/1‑93 (MQ=255)
                                                                aaTTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATcgcg                         >  2:6531026/1‑93 (MQ=255)
                                                                aaTTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATcgcg                         <  2:6325094/93‑1 (MQ=255)
                                                                 aTTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCgcgc                        <  1:1935479/93‑1 (MQ=255)
                                                                 aTTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCgcgc                        >  1:7156456/1‑93 (MQ=255)
                                                                    tGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCgcagc                     <  1:987726/93‑1 (MQ=255)
                                                                    tGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCgcagc                     <  2:2310755/93‑1 (MQ=255)
                                                                    tGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCgcagc                     <  1:8896456/93‑1 (MQ=255)
                                                                      ggggTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCaa                   <  1:5877002/90‑1 (MQ=255)
                                                                      cgcgTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCaa                   <  2:3873129/93‑1 (MQ=255)
                                                                       gcgTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAAc                  <  2:2052245/93‑1 (MQ=255)
                                                                          tGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGcc               <  1:2084044/93‑1 (MQ=255)
                                                                          tGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGcc               >  2:7843733/1‑93 (MQ=255)
                                                                           gACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCt              >  1:6439320/1‑93 (MQ=255)
                                                                           gACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCt              <  2:7391710/93‑1 (MQ=255)
                                                                             cGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGc            <  1:5709395/93‑1 (MQ=255)
                                                                             cGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGc            <  2:4798635/93‑1 (MQ=255)
                                                                               ggAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCgg          >  2:689819/1‑93 (MQ=255)
                                                                                  aGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGccc       <  2:5770537/93‑1 (MQ=255)
                                                                                   gCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCt      >  1:833473/1‑93 (MQ=255)
                                                                                     cAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCttt    >  1:2641128/1‑93 (MQ=255)
                                                                                     cAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCttt    >  1:7839649/1‑93 (MQ=255)
                                                                                      aGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGTCCCTTTc   >  1:2398428/1‑93 (MQ=255)
                                                                                       gcgcTTCATCATCGGGCGGGGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTcc  <  2:2923368/93‑1 (MQ=255)
                                                                                       gcgcTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTcc  >  1:2802867/1‑93 (MQ=255)
                                                                                       gcgcTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTcc  <  2:954526/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGTTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCC  >  NC_000913/2953287‑2953466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGATCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGTTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAGGT  >  NC_000913/2953284‑2953470
                                                                                             |                                                                                             
CGATCAGCGCATCCAGTTCACCCTCTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGC                                                                                               <  SRR4302540.1763540/94‑1 (MQ=60)
CGATCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGC                                                                                               >  SRR4302540.1487990/1‑94 (MQ=60)
CGATCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGC                                                                                               >  SRR4302540.1487991/1‑94 (MQ=60)
 GATCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCT                                                                                              >  SRR4302540.441458/1‑94 (MQ=60)
 GATCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCT                                                                                              <  SRR4302540.4177720/94‑1 (MQ=60)
  ATCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTT                                                                                             >  SRR4302540.5059063/1‑94 (MQ=60)
  ATCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTT                                                                                             >  SRR4302540.4891754/1‑94 (MQ=60)
   TCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTC                                                                                            <  SRR4302540.6919895/94‑1 (MQ=60)
   TCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTC                                                                                            >  SRR4302540.1640599/1‑94 (MQ=60)
    CAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCA                                                                                           <  SRR4302540.8107565/94‑1 (MQ=60)
     AGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCAT                                                                                          <  SRR4302540.8374082/94‑1 (MQ=60)
      GCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATC                                                                                         <  SRR4302540.5120277/94‑1 (MQ=60)
       CGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCA                                                                                        >  SRR4302540.8620340/1‑94 (MQ=60)
       CGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCA                                                                                        >  SRR4302540.4861567/1‑94 (MQ=60)
       CGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCA                                                                                        <  SRR4302540.3384138/94‑1 (MQ=60)
       CGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTACGCGTGACGGGAAGCCAGCGCTTCATCA                                                                                        >  SRR4302540.4861568/1‑94 (MQ=60)
        GCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCAT                                                                                       <  SRR4302540.1765507/94‑1 (MQ=60)
          ATTCAGTTCACCCACTGCGTCGCGCCATTGCTGTTTTTCCGTATCAATACGCGCCACAATTTGCGTGTGACGGGAAGCCAGCGCTTCATCATCG                                                                                     >  SRR4302540.9074549/1‑94 (MQ=60)
          ATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCG                                                                                     >  SRR4302540.7760786/1‑94 (MQ=60)
          ATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCG                                                                                     >  SRR4302540.7760785/1‑94 (MQ=60)
          ATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCG                                                                                     <  SRR4302540.9116570/94‑1 (MQ=60)
          ATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCG                                                                                     <  SRR4302540.2797664/94‑1 (MQ=60)
           TCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGG                                                                                    >  SRR4302540.2890775/1‑94 (MQ=60)
            CCAGTTCCCCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACATTTGGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGG                                                                                   <  SRR4302540.2104597/94‑1 (MQ=60)
            CCAGTTCACCCGCTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGG                                                                                   <  SRR4302540.9528212/94‑1 (MQ=60)
            CCAGTTCACCCGCTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGG                                                                                   <  SRR4302540.9528213/94‑1 (MQ=60)
             CAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGC                                                                                  >  SRR4302540.1750796/1‑94 (MQ=60)
             CAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGC                                                                                  >  SRR4302540.1007179/1‑94 (MQ=60)
             CAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGC                                                                                  <  SRR4302540.460579/94‑1 (MQ=60)
              AGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCG                                                                                 >  SRR4302540.2890751/1‑94 (MQ=60)
              AGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCG                                                                                 >  SRR4302540.896680/1‑94 (MQ=60)
              AGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCG                                                                                 >  SRR4302540.7242189/1‑94 (MQ=60)
               tttccCCCACTGCGGCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGG                                                                                <  SRR4302540.7543414/89‑1 (MQ=60)
                TTCACCCACTGCGTCGCGTCACTGCTGTTTTGCCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCACCGCTTCATCATCGGGCGGC                                                                               >  SRR4302540.7606308/1‑94 (MQ=60)
                 TCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCG                                                                              <  SRR4302540.3895572/94‑1 (MQ=60)
                  CACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGG                                                                             <  SRR4302540.8875780/94‑1 (MQ=60)
                   CCCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGT                                                                            <  SRR4302540.20244/94‑1 (MQ=60)
                   CCCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGT                                                                            <  SRR4302540.8674708/94‑1 (MQ=60)
                   CCCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGT                                                                            <  SRR4302540.8674709/94‑1 (MQ=60)
                   ACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGT                                                                            >  SRR4302540.797216/1‑94 (MQ=60)
                    CCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTG                                                                           <  SRR4302540.9153870/94‑1 (MQ=60)
                    CCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTG                                                                           <  SRR4302540.9153871/94‑1 (MQ=60)
                    CCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTG                                                                           <  SRR4302540.1406800/94‑1 (MQ=60)
                    CCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTG                                                                           <  SRR4302540.1406801/94‑1 (MQ=60)
                     CCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGC                                                                          <  SRR4302540.6912738/94‑1 (MQ=60)
                     CCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGC                                                                          <  SRR4302540.1231695/94‑1 (MQ=60)
                       ACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAACCAGCGCTTCATCATCGGGCGGCGGTGCTT                                                                        >  SRR4302540.9653978/1‑94 (MQ=60)
                        CTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTT                                                                       >  SRR4302540.5016035/1‑94 (MQ=60)
                        CTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTT                                                                       >  SRR4302540.5016036/1‑94 (MQ=60)
                        CTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTT                                                                       >  SRR4302540.484958/1‑94 (MQ=60)
                        CTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTT                                                                       >  SRR4302540.9130093/1‑94 (MQ=60)
                         TGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTG                                                                      <  SRR4302540.2552373/94‑1 (MQ=60)
                         TGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTG                                                                      <  SRR4302540.3463977/94‑1 (MQ=60)
                          GCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGA                                                                     <  SRR4302540.9750247/94‑1 (MQ=60)
                            GTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATA                                                                   >  SRR4302540.5989797/1‑94 (MQ=60)
                            GTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATA                                                                   >  SRR4302540.3410783/1‑94 (MQ=60)
                             TCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAA                                                                  <  SRR4302540.4620695/94‑1 (MQ=60)
                             TCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAA                                                                  <  SRR4302540.5965495/94‑1 (MQ=60)
                             TCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAA                                                                  <  SRR4302540.5965729/94‑1 (MQ=60)
                              CGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAAC                                                                 <  SRR4302540.476028/94‑1 (MQ=60)
                               GCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACC                                                                >  SRR4302540.2291663/1‑94 (MQ=60)
                               GCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACC                                                                <  SRR4302540.781596/94‑1 (MQ=60)
                               GCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACC                                                                <  SRR4302540.8056383/94‑1 (MQ=60)
                               CCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACC                                                                <  SRR4302540.2600221/94‑1 (MQ=60)
                                CGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCG                                                               >  SRR4302540.969059/1‑94 (MQ=60)
                                 GCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGG                                                              <  SRR4302540.300119/94‑1 (MQ=60)
                                 GCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGG                                                              >  SRR4302540.7475972/1‑94 (MQ=60)
                                  ctgcttCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGC                                                             <  SRR4302540.6625501/88‑1 (MQ=60)
                                   cacgtctcTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCCCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCG                                                            <  SRR4302540.4825186/86‑1 (MQ=60)
                                   CACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCG                                                            >  SRR4302540.9427485/1‑94 (MQ=60)
                                   CACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCG                                                            <  SRR4302540.9827886/94‑1 (MQ=60)
                                   CACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCG                                                            >  SRR4302540.9759617/1‑94 (MQ=60)
                                    ACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGC                                                           >  SRR4302540.1013621/1‑94 (MQ=60)
                                    ACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGC                                                           >  SRR4302540.7932228/1‑94 (MQ=60)
                                    ACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGC                                                           <  SRR4302540.1585932/94‑1 (MQ=60)
                                     CTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGNGGTGCTTTGATAACCGGCGCN                                                          >  SRR4302540.8202247/1‑94 (MQ=60)
                                     CTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCT                                                          >  SRR4302540.1938635/1‑94 (MQ=60)
                                     CTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCT                                                          >  SRR4302540.1938634/1‑94 (MQ=60)
                                     CTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCT                                                          <  SRR4302540.6533981/94‑1 (MQ=60)
                                     CTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCT                                                          >  SRR4302540.10067320/1‑94 (MQ=60)
                                      TGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTT                                                         >  SRR4302540.9362870/1‑94 (MQ=60)
                                      TGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTT                                                         <  SRR4302540.440833/94‑1 (MQ=60)
                                      TGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTT                                                         >  SRR4302540.9826630/1‑94 (MQ=60)
                                       GCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTC                                                        >  SRR4302540.15697/1‑94 (MQ=60)
                                       GCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTC                                                        <  SRR4302540.28445/94‑1 (MQ=60)
                                       GCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTC                                                        >  SRR4302540.1864615/1‑94 (MQ=60)
                                       GCTGTGTTACCGTATCAATTCGCGTCACAATTTGCGCCTGACGGGAAGCCAGCGCTTCAGCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTC                                                        <  SRR4302540.6996171/94‑1 (MQ=60)
                                        CTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCG                                                       >  SRR4302540.3227978/1‑94 (MQ=60)
                                         TGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGC                                                      >  SRR4302540.1030225/1‑94 (MQ=60)
                                         TGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGC                                                      >  SRR4302540.3066926/1‑94 (MQ=60)
                                         TGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGC                                                      >  SRR4302540.1030226/1‑94 (MQ=60)
                                          GTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCC                                                     >  SRR4302540.9169494/1‑94 (MQ=60)
                                           TTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCT                                                    <  SRR4302540.6152341/94‑1 (MQ=60)
                                           TTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCT                                                    >  SRR4302540.8032017/1‑94 (MQ=60)
                                           TTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCT                                                    >  SRR4302540.5648886/1‑94 (MQ=60)
                                            TTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTT                                                   <  SRR4302540.7611378/94‑1 (MQ=60)
                                            TTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTT                                                   <  SRR4302540.8933039/94‑1 (MQ=60)
                                             TTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTG                                                  <  SRR4302540.8251911/94‑1 (MQ=60)
                                              TACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGC                                                 >  SRR4302540.1822292/1‑94 (MQ=60)
                                               ACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGTTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCA                                                <  SRR4302540.505735/94‑1 (MQ=60)
                                               ACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATCACCGGCGCTTCGCCTTGCA                                                >  SRR4302540.8228677/1‑94 (MQ=60)
                                               ACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCA                                                <  SRR4302540.7478058/94‑1 (MQ=60)
                                               ACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCA                                                <  SRR4302540.1998824/94‑1 (MQ=60)
                                               ACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCA                                                >  SRR4302540.8228678/1‑94 (MQ=60)
                                               ACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCA                                                <  SRR4302540.1912498/94‑1 (MQ=60)
                                               ACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCA                                                <  SRR4302540.5709947/94‑1 (MQ=60)
                                                CCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAG                                               <  SRR4302540.8450109/94‑1 (MQ=60)
                                                CCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAG                                               <  SRR4302540.6018375/94‑1 (MQ=60)
                                                CCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAG                                               <  SRR4302540.8450111/94‑1 (MQ=60)
                                                  GTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGAT                                             >  SRR4302540.9249751/1‑94 (MQ=60)
                                                  GTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGAT                                             >  SRR4302540.3694383/1‑94 (MQ=60)
                                                   TATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATA                                            <  SRR4302540.3392540/94‑1 (MQ=60)
                                                   TATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATA                                            <  SRR4302540.5143761/94‑1 (MQ=60)
                                                    ATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAA                                           >  SRR4302540.8991863/1‑94 (MQ=60)
                                                    ATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAA                                           <  SRR4302540.6725259/94‑1 (MQ=60)
                                                    ATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAA                                           >  SRR4302540.1925503/1‑94 (MQ=60)
                                                    ATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAA                                           >  SRR4302540.9706050/1‑94 (MQ=60)
                                                     TCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAAC                                          <  SRR4302540.9344117/94‑1 (MQ=60)
                                                      CAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACG                                         <  SRR4302540.1436786/94‑1 (MQ=60)
                                                      CAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACG                                         >  SRR4302540.8254663/1‑94 (MQ=60)
                                                       AATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGA                                        <  SRR4302540.8047577/94‑1 (MQ=60)
                                                        ATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGAT                                       <  SRR4302540.7086085/94‑1 (MQ=60)
                                                        ATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGAT                                       >  SRR4302540.3976504/1‑94 (MQ=60)
                                                        ATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGAT                                       <  SRR4302540.8246130/94‑1 (MQ=60)
                                                        ATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGAT                                       <  SRR4302540.6851936/94‑1 (MQ=60)
                                                        ATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGAT                                       >  SRR4302540.2364377/1‑94 (MQ=60)
                                                         AACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATT                                      <  SRR4302540.4633158/94‑1 (MQ=60)
                                                          ACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTA                                     <  SRR4302540.4442564/94‑1 (MQ=60)
                                                          ACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTA                                     >  SRR4302540.1121079/1‑94 (MQ=60)
                                                          ACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCAGCGCTTCGCCTTGCAGATAACGATTA                                     >  SRR4302540.7226413/1‑94 (MQ=60)
                                                           CGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAA                                    <  SRR4302540.5482832/94‑1 (MQ=60)
                                                            GCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAAT                                   >  SRR4302540.4888261/1‑94 (MQ=60)
                                                            GCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAAT                                   <  SRR4302540.4870902/94‑1 (MQ=60)
                                                            GCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAAT                                   <  SRR4302540.1923117/94‑1 (MQ=60)
                                                            GCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAAT                                   <  SRR4302540.4899217/94‑1 (MQ=60)
                                                            GCGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAAT                                   <  SRR4302540.2850865/94‑1 (MQ=60)
                                                             CGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATA                                  <  SRR4302540.2360839/94‑1 (MQ=60)
                                                             CGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATA                                  <  SRR4302540.1903692/94‑1 (MQ=60)
                                                             CGCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATA                                  <  SRR4302540.7351158/94‑1 (MQ=60)
                                                              GCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATAT                                 <  SRR4302540.4573734/94‑1 (MQ=60)
                                                              GCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATAT                                 >  SRR4302540.8061877/1‑94 (MQ=60)
                                                              GCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATAT                                 <  SRR4302540.952197/94‑1 (MQ=60)
                                                              GCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATAT                                 <  SRR4302540.5193541/94‑1 (MQ=60)
                                                              GCCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCAGCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATAT                                 <  SRR4302540.5174621/94‑1 (MQ=60)
                                                               CCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATC                                <  SRR4302540.2231015/94‑1 (MQ=60)
                                                               CCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATC                                <  SRR4302540.5369780/94‑1 (MQ=60)
                                                               CCACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATC                                >  SRR4302540.3665954/1‑94 (MQ=60)
                                                                CACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCG                               <  SRR4302540.6878379/94‑1 (MQ=60)
                                                                 ACAATTTGCGCGTGACGGGACGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGG                              >  SRR4302540.9772688/1‑94 (MQ=60)
                                                                 ACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGC                              <  SRR4302540.9695288/94‑1 (MQ=60)
                                                                 ACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGC                              <  SRR4302540.4819301/94‑1 (MQ=60)
                                                                 ACAATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGC                              >  SRR4302540.3046728/1‑94 (MQ=60)
                                                                   AATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGC                            >  SRR4302540.7236219/1‑94 (MQ=60)
                                                                   AATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGC                            >  SRR4302540.9338538/1‑94 (MQ=60)
                                                                    ATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCA                           >  SRR4302540.7732038/1‑94 (MQ=60)
                                                                    ATTTGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCA                           <  SRR4302540.1956565/94‑1 (MQ=60)
                                                                       TGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCA                        <  SRR4302540.997819/94‑1 (MQ=60)
                                                                       TGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCA                        <  SRR4302540.8999439/94‑1 (MQ=60)
                                                                       TGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCA                        <  SRR4302540.7800358/94‑1 (MQ=60)
                                                                       TGCGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCA                        <  SRR4302540.2166027/94‑1 (MQ=60)
                                                                         gggGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAAC                      <  SRR4302540.5941964/91‑1 (MQ=60)
                                                                         CGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAAC                      <  SRR4302540.3251572/94‑1 (MQ=60)
                                                                         CGCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAAC                      >  SRR4302540.5938085/1‑94 (MQ=60)
                                                                          GCGTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACG                     >  SRR4302540.65409/1‑94 (MQ=60)
                                                                            GTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTTCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCC                   <  SRR4302540.8373873/94‑1 (MQ=60)
                                                                            GTGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCC                   <  SRR4302540.1668107/94‑1 (MQ=60)
                                                                            GTGACGGCAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCC                   >  SRR4302540.3913503/1‑94 (MQ=60)
                                                                             TGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCT                  >  SRR4302540.7581709/1‑94 (MQ=60)
                                                                             TGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCT                  <  SRR4302540.374307/94‑1 (MQ=60)
                                                                             TGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCT                  <  SRR4302540.9613350/94‑1 (MQ=60)
                                                                             TGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCT                  >  SRR4302540.6510986/1‑94 (MQ=60)
                                                                             TGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCT                  >  SRR4302540.6078763/1‑94 (MQ=60)
                                                                             TGACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCT                  <  SRR4302540.2106429/94‑1 (MQ=60)
                                                                              GACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTG                 <  SRR4302540.5910010/94‑1 (MQ=60)
                                                                               ACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGC                <  SRR4302540.2223078/94‑1 (MQ=60)
                                                                               ACGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGC                <  SRR4302540.9070442/94‑1 (MQ=60)
                                                                                tggcagtcgAGCGTTTCAGGATCGGGCGGCCGTGCTTTCCTAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCG               <  SRR4302540.8686067/85‑1 (MQ=60)
                                                                                CGGGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCG               <  SRR4302540.5772246/94‑1 (MQ=60)
                                                                                  GGAAGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGC             <  SRR4302540.8054170/94‑1 (MQ=60)
                                                                                     AGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCT          >  SRR4302540.842322/1‑94 (MQ=60)
                                                                                     AGCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCT          <  SRR4302540.5317784/94‑1 (MQ=60)
                                                                                      GCCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTT         >  SRR4302540.9931368/1‑94 (MQ=60)
                                                                                       CCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTT        >  SRR4302540.2669762/1‑94 (MQ=60)
                                                                                       CCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTT        >  SRR4302540.2669763/1‑94 (MQ=60)
                                                                                       CCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTT        <  SRR4302540.1482029/94‑1 (MQ=60)
                                                                                       CCAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTT        >  SRR4302540.7931242/1‑94 (MQ=60)
                                                                                        CAGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGTCCCTTTC       >  SRR4302540.2424276/1‑94 (MQ=60)
                                                                                         AGCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCC      >  SRR4302540.2833140/1‑94 (MQ=60)
                                                                                          GCGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCA     >  SRR4302540.7126883/1‑94 (MQ=60)
                                                                                           CGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATCACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAG    >  SRR4302540.5790451/1‑94 (MQ=60)
                                                                                           CGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAG    <  SRR4302540.4453519/94‑1 (MQ=60)
                                                                                           CGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAG    >  SRR4302540.9412142/1‑94 (MQ=60)
                                                                                           CGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAG    <  SRR4302540.534309/94‑1 (MQ=60)
                                                                                           CGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAG    >  SRR4302540.5790450/1‑94 (MQ=60)
                                                                                           CGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAG    <  SRR4302540.6654871/94‑1 (MQ=60)
                                                                                           CGCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAG    <  SRR4302540.7686593/94‑1 (MQ=60)
                                                                                            GCTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAGG   <  SRR4302540.5604575/94‑1 (MQ=60)
                                                                                             CTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAGGT  <  SRR4302540.9134553/94‑1 (MQ=60)
                                                                                             CTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAGGT  <  SRR4302540.794614/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGATCAGCGCATCCAGTTCACCCACTGCGTCGCGCCACTGCTGTTTTACCGTATCAATACGCGCCACAATTTGCGCGTGACGGGAAGCCAGCGTTTCATCATCGGGCGGCGGTGCTTTGATAACCGGCGCTTCGCCTTGCAGATAACGATTAATATCGCGCAGCAACGCCTGCGGCCCTTTCCAGGT  >  NC_000913/2953284‑2953470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑