Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,979,391 T→C T272A (ACC→GCC)  araE ← low‑affinity L‑arabinose transport system proton symport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,979,3910TC99.6% 1487.1 / ‑5.3 462T272A (ACC→GCC) araElow‑affinity L‑arabinose transport system proton symport protein
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (235/223);  total (237/225)
Fisher's exact test for biased strand distribution p-value = 2.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01

Only 100 of 473 total aligned reads displayed.

CAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTT  >  NC_000913/2979302‑2979480
                                                                                         |                                                                                         
cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCaaa                                                                                        <  1:7251267/93‑1 (MQ=255)
cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCaaa                                                                                        >  2:6388557/1‑93 (MQ=255)
cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCaaa                                                                                        >  1:297566/1‑93 (MQ=255)
 agagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAc                                                                                       >  1:1070757/1‑93 (MQ=255)
 agagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAc                                                                                       >  2:9362742/1‑93 (MQ=255)
 agagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAc                                                                                       <  1:4773420/93‑1 (MQ=255)
   agTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActg                                                                                     <  2:1584375/93‑1 (MQ=255)
   agTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActg                                                                                     <  1:2420051/93‑1 (MQ=255)
   agTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActg                                                                                     >  1:4383027/1‑93 (MQ=255)
    gTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgc                                                                                    <  1:5227807/93‑1 (MQ=255)
      cGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgctg                                                                                  <  1:9742996/93‑1 (MQ=255)
       gCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACtgctgc                                                                                 <  2:9707533/93‑1 (MQ=255)
        cAATCATCTGTTGTTCTATGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCa                                                                                <  2:6971280/93‑1 (MQ=255)
           tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             >  1:7019937/1‑93 (MQ=255)
           tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             >  2:2089514/1‑93 (MQ=255)
            catcTGTTGTTCTGTGGTCGTAAAGCCCGCCGTTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGc                                                                            >  1:5108827/1‑93 (MQ=255)
             atcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGcc                                                                           >  2:1664461/1‑93 (MQ=255)
              tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          <  1:9851434/93‑1 (MQ=255)
              tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          <  1:8766038/93‑1 (MQ=255)
                tgttgtTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGc                                                                        >  1:3083628/1‑93 (MQ=255)
                 gttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGca                                                                       <  2:8613314/93‑1 (MQ=255)
                  ttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaa                                                                      >  2:3011668/1‑93 (MQ=255)
                   tgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaac                                                                     <  2:7722784/93‑1 (MQ=255)
                   tgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaac                                                                     >  1:8919000/1‑93 (MQ=255)
                    gttTTGTGGTGGAAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATTTTCATACCGGTAAACTGCTGCATCGCCTGcaaca                                                                    <  2:6107296/93‑1 (MQ=255)
                       cTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCCTACCGGCAAACTGCTGCATCGCCTGCAacaaca                                                                 >  1:1303833/1‑93 (MQ=255)
                       cTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAacaaca                                                                 <  2:4534895/93‑1 (MQ=255)
                        tgtgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACAt                                                                >  1:1997825/1‑93 (MQ=255)
                          tgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAc                                                              <  1:8598950/93‑1 (MQ=255)
                           ggTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAcc                                                             >  2:1030446/1‑93 (MQ=255)
                             tCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCga                                                           <  1:6497230/93‑1 (MQ=255)
                             tCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCga                                                           >  1:375246/1‑93 (MQ=255)
                                tAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaa                                                        <  1:342659/93‑1 (MQ=255)
                                  aaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAac                                                      >  1:8103416/1‑93 (MQ=255)
                                  aaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAac                                                      <  1:6202465/93‑1 (MQ=255)
                                    gCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAacac                                                    <  1:4471345/93‑1 (MQ=255)
                                    gCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAacac                                                    <  1:7662545/93‑1 (MQ=255)
                                         ccATTTTGAAGATTCGCGGCGCGTAGTACATGATGATGTTCATTCCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               <  1:3278644/93‑1 (MQ=255)
                                         ccATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               >  2:1095072/1‑93 (MQ=255)
                                         ccATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               >  2:1483019/1‑93 (MQ=255)
                                         ccATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               >  2:700044/1‑93 (MQ=255)
                                          cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacg                                              >  1:2855080/1‑93 (MQ=255)
                                          cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCaca                                              >  1:4664879/1‑92 (MQ=255)
                                           aTTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacga                                             >  1:3922266/1‑93 (MQ=255)
                                              ttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgg                                          <  2:2521212/93‑1 (MQ=255)
                                              ttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgg                                          >  2:3547380/1‑93 (MQ=255)
                                              ttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgg                                          <  1:7831777/93‑1 (MQ=255)
                                              ttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgg                                          <  1:679840/93‑1 (MQ=255)
                                               tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         <  1:9641483/93‑1 (MQ=255)
                                                  aGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGt                                      >  2:8484119/1‑93 (MQ=255)
                                                   gATACGCGGCGCGTAGTACATGATTATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGtt                                     <  1:9346762/93‑1 (MQ=255)
                                                   gATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGtt                                     >  1:9502682/1‑93 (MQ=255)
                                                    aTACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTa                                    <  2:4673166/93‑1 (MQ=255)
                                                    aTACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTa                                    <  2:2310531/93‑1 (MQ=255)
                                                     tACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAc                                   >  1:7430673/1‑93 (MQ=255)
                                                     tACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAc                                   <  1:3999407/93‑1 (MQ=255)
                                                     tACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAc                                   >  2:6664033/1‑93 (MQ=255)
                                                      aCGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACg                                  <  2:4216316/93‑1 (MQ=255)
                                                        gcggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGt                                <  2:5461174/93‑1 (MQ=255)
                                                        gcggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGt                                <  2:909570/93‑1 (MQ=255)
                                                         cggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGtt                               >  2:7528004/1‑93 (MQ=255)
                                                          ggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTg                              >  2:5295201/1‑93 (MQ=255)
                                                           gcgcGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGa                             <  2:119160/93‑1 (MQ=255)
                                                             gcgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATc                           >  2:3325538/1‑93 (MQ=255)
                                                             gcgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATc                           >  2:4792398/1‑93 (MQ=255)
                                                              cgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCt                          >  2:6840065/1‑93 (MQ=255)
                                                              cgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCt                          >  2:5183405/1‑93 (MQ=255)
                                                               gtagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCtt                         >  2:244316/1‑93 (MQ=255)
                                                                tagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTa                        >  2:2739724/1‑93 (MQ=255)
                                                                tagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTa                        <  1:5011172/93‑1 (MQ=255)
                                                                tagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTa                        >  2:7119570/1‑93 (MQ=255)
                                                                  gtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTaaa                      <  1:5962081/93‑1 (MQ=255)
                                                                   taCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAc                     >  1:5730323/1‑93 (MQ=255)
                                                                   taCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAc                     <  2:8821231/93‑1 (MQ=255)
                                                                   taCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAc                     >  2:5762238/1‑93 (MQ=255)
                                                                   taCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAc                     <  1:7158387/93‑1 (MQ=255)
                                                                    aCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACa                    <  1:1164175/93‑1 (MQ=255)
                                                                    aCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACa                    <  2:3663835/93‑1 (MQ=255)
                                                                    aCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACa                    <  1:1507141/93‑1 (MQ=255)
                                                                     cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   <  2:3855873/93‑1 (MQ=255)
                                                                     cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   <  2:1924282/93‑1 (MQ=255)
                                                                     cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   >  1:1601029/1‑93 (MQ=255)
                                                                     cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   <  1:8308883/93‑1 (MQ=255)
                                                                     cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   >  1:2582300/1‑93 (MQ=255)
                                                                      atgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  >  1:4919812/1‑93 (MQ=255)
                                                                       tgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTg                 <  2:9849078/93‑1 (MQ=255)
                                                                       tgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTg                 >  2:6540373/1‑93 (MQ=255)
                                                                        gatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGc                >  2:7289571/1‑93 (MQ=255)
                                                                             tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           <  1:7983909/93‑1 (MQ=255)
                                                                             tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           >  1:3685818/1‑93 (MQ=255)
                                                                              gTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAcc          <  2:4392409/93‑1 (MQ=255)
                                                                               ttCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCg         >  1:2224977/1‑93 (MQ=255)
                                                                                tCATACCGGAAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGc        >  2:7630848/1‑93 (MQ=255)
                                                                                 cATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGcc       <  1:5496799/93‑1 (MQ=255)
                                                                                  aTACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGccc      >  1:4197849/1‑93 (MQ=255)
                                                                                  aTACCGGCAAACTACAGCATCGACAGCACCAACATACCGAGAAACGCAGCACGACGGACGATAAGGTTGATCTTAAACAGTGACCAACCGcac      <  1:8989310/93‑3 (MQ=255)
                                                                                   tACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCt     <  2:7918045/93‑1 (MQ=255)
                                                                                   tACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCt     <  2:8189064/93‑1 (MQ=255)
                                                                                    aCCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTg    <  2:4930705/93‑1 (MQ=255)
                                                                                     ccGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCAAGACGGACGTTACGGTTGATTTTAAACAGTGCCCAACCCCCCTGt   >  2:2858937/1‑93 (MQ=255)
                                                                                         |                                                                                         
CAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTT  >  NC_000913/2979302‑2979480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 250 total aligned reads displayed.
CGACCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTTTTAA  >  NC_000913/2979298‑2979484
                                                                                             |                                                                                             
CGACCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGC                                                                                               <  SRR4302540.3108363/94‑1 (MQ=60)
 GACCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCA                                                                                              >  SRR4302540.6570049/1‑94 (MQ=60)
  ACCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAA                                                                                             <  SRR4302540.8633376/94‑1 (MQ=60)
   CCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAA                                                                                            >  SRR4302540.300514/1‑94 (MQ=60)
   CCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAA                                                                                            >  SRR4302540.3146813/1‑94 (MQ=60)
    CAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAC                                                                                           >  SRR4302540.1081676/1‑94 (MQ=60)
    CAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAC                                                                                           <  SRR4302540.7332185/94‑1 (MQ=60)
     AGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACT                                                                                          <  SRR4302540.4824413/94‑1 (MQ=60)
     AGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACT                                                                                          <  SRR4302540.2241640/94‑1 (MQ=60)
     AGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACT                                                                                          <  SRR4302540.2049573/94‑1 (MQ=60)
     AGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGACCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACT                                                                                          <  SRR4302540.8632800/94‑1 (MQ=60)
      GAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTG                                                                                         <  SRR4302540.6710390/94‑1 (MQ=60)
      GAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTG                                                                                         >  SRR4302540.4430618/1‑94 (MQ=60)
      GAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGAGTAGTACATGATGATGTTCATACCGGCAAACTG                                                                                         >  SRR4302540.9784251/1‑94 (MQ=60)
       AGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGC                                                                                        >  SRR4302540.8129386/1‑94 (MQ=60)
       AGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGC                                                                                        <  SRR4302540.2446133/94‑1 (MQ=60)
        GTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCT                                                                                       <  SRR4302540.9673439/94‑1 (MQ=60)
        GTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCT                                                                                       <  SRR4302540.5284820/94‑1 (MQ=60)
          CGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGC                                                                                     <  SRR4302540.9857348/94‑1 (MQ=60)
           GCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCA                                                                                    >  SRR4302540.5912982/1‑94 (MQ=60)
            CAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCAT                                                                                   >  SRR4302540.3013050/1‑94 (MQ=60)
            CAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCAT                                                                                   >  SRR4302540.4394365/1‑94 (MQ=60)
            CAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCAT                                                                                   >  SRR4302540.7267042/1‑94 (MQ=60)
            CAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCAT                                                                                   <  SRR4302540.4616949/94‑1 (MQ=60)
            CAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCAT                                                                                   <  SRR4302540.4771380/94‑1 (MQ=60)
             AATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATC                                                                                  >  SRR4302540.5875310/1‑94 (MQ=60)
             AATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATC                                                                                  >  SRR4302540.1432163/1‑94 (MQ=60)
             AATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATC                                                                                  >  SRR4302540.614690/1‑94 (MQ=60)
             AATCATCTGTTGTTCTGTGGGCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATC                                                                                  <  SRR4302540.7661128/94‑1 (MQ=60)
              ATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCG                                                                                 >  SRR4302540.7097905/1‑94 (MQ=60)
              ATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCG                                                                                 >  SRR4302540.1000607/1‑94 (MQ=60)
              ATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCG                                                                                 >  SRR4302540.10039677/1‑94 (MQ=60)
              ATCATCTGTTGTGCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCG                                                                                 <  SRR4302540.9230119/94‑1 (MQ=60)
               TCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCGTTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGC                                                                                >  SRR4302540.5164124/1‑94 (MQ=60)
               TCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGC                                                                                >  SRR4302540.1325530/1‑94 (MQ=60)
                CATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCC                                                                               >  SRR4302540.6980271/1‑94 (MQ=60)
                 ATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCT                                                                              <  SRR4302540.1574352/94‑1 (MQ=60)
                  TCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTG                                                                             <  SRR4302540.8867650/94‑1 (MQ=60)
                  TCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTG                                                                             <  SRR4302540.9966578/94‑1 (MQ=60)
                  TCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTG                                                                             >  SRR4302540.4396884/1‑94 (MQ=60)
                  TCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTG                                                                             <  SRR4302540.8506726/94‑1 (MQ=60)
                  TCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTG                                                                             <  SRR4302540.3118055/94‑1 (MQ=60)
                   CTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGC                                                                            >  SRR4302540.3117461/1‑94 (MQ=60)
                   CTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGC                                                                            >  SRR4302540.3557153/1‑94 (MQ=60)
                   CTCTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGC                                                                            <  SRR4302540.4470802/94‑1 (MQ=60)
                    TGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCA                                                                           >  SRR4302540.5071232/1‑94 (MQ=60)
                      TTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAAC                                                                         >  SRR4302540.9022298/1‑94 (MQ=60)
                        GTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAA                                                                       <  SRR4302540.3821969/94‑1 (MQ=60)
                         TTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAAC                                                                      >  SRR4302540.9176666/1‑94 (MQ=60)
                          TCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCCTACCGGCAAACTGCTGCATCGCCTGCAACAACA                                                                     >  SRR4302540.1317363/1‑94 (MQ=60)
                          TCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACA                                                                     <  SRR4302540.9599692/94‑1 (MQ=60)
                           CTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACAT                                                                    <  SRR4302540.2746864/94‑1 (MQ=60)
                           CTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACAT                                                                    >  SRR4302540.888555/1‑94 (MQ=60)
                           CTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACAT                                                                    >  SRR4302540.2019469/1‑94 (MQ=60)
                            TGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATA                                                                   <  SRR4302540.10068118/94‑1 (MQ=60)
                            TGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATA                                                                   >  SRR4302540.4896358/1‑94 (MQ=60)
                            TGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATA                                                                   >  SRR4302540.5559678/1‑94 (MQ=60)
                             ttgtTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAC                                                                  <  SRR4302540.3727687/90‑1 (MQ=60)
                             GTGGTCGTAAAACCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAC                                                                  <  SRR4302540.7307301/94‑1 (MQ=60)
                             GTGCTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATCCCGGCAAACTGCTGCATCGCCTGAAACAACATAC                                                                  <  SRR4302540.6386290/94‑1 (MQ=60)
                              TGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACC                                                                 >  SRR4302540.1400982/1‑94 (MQ=60)
                              TGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACC                                                                 <  SRR4302540.8698897/94‑1 (MQ=60)
                               GGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCG                                                                >  SRR4302540.5286244/1‑94 (MQ=60)
                               GGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCG                                                                >  SRR4302540.9470971/1‑94 (MQ=60)
                               GGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCG                                                                >  SRR4302540.6292023/1‑94 (MQ=60)
                                GTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGA                                                               >  SRR4302540.379132/1‑94 (MQ=60)
                                GTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGA                                                               <  SRR4302540.9747089/94‑1 (MQ=60)
                                 TCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAG                                                              <  SRR4302540.8155647/94‑1 (MQ=60)
                                 TCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAG                                                              <  SRR4302540.8189452/94‑1 (MQ=60)
                                 TCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAG                                                              <  SRR4302540.6569476/94‑1 (MQ=60)
                                   GTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAA                                                            <  SRR4302540.3716819/94‑1 (MQ=60)
                                   GTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAA                                                            <  SRR4302540.743577/94‑1 (MQ=60)
                                   GTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAA                                                            >  SRR4302540.122175/1‑94 (MQ=60)
                                   GTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAA                                                            >  SRR4302540.9411219/1‑94 (MQ=60)
                                    TAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAA                                                           <  SRR4302540.346133/94‑1 (MQ=60)
                                    TAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAA                                                           <  SRR4302540.694944/94‑1 (MQ=60)
                                     AATGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAAC                                                          <  SRR4302540.111646/94‑1 (MQ=60)
                                     AAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAAC                                                          >  SRR4302540.8197465/1‑94 (MQ=60)
                                     AAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAAC                                                          <  SRR4302540.111644/94‑1 (MQ=60)
                                      AAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACA                                                         <  SRR4302540.6271510/94‑1 (MQ=60)
                                       AGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACAC                                                        <  SRR4302540.6181061/94‑1 (MQ=60)
                                        GCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACA                                                       <  SRR4302540.4519833/94‑1 (MQ=60)
                                        GCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACA                                                       <  SRR4302540.4519834/94‑1 (MQ=60)
                                        GCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACA                                                       <  SRR4302540.7748848/94‑1 (MQ=60)
                                        GCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTGCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACA                                                       <  SRR4302540.4519832/94‑1 (MQ=60)
                                         CCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAG                                                      >  SRR4302540.3559734/1‑94 (MQ=60)
                                         CCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAG                                                      <  SRR4302540.9887396/94‑1 (MQ=60)
                                         CCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAG                                                      <  SRR4302540.4036938/94‑1 (MQ=60)
                                         CCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAC                                                      >  SRR4302540.8280247/1‑94 (MQ=60)
                                          CCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGC                                                     >  SRR4302540.3881209/1‑94 (MQ=60)
                                          CCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGC                                                     <  SRR4302540.3458523/94‑1 (MQ=60)
                                          CCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGC                                                     <  SRR4302540.5106781/94‑1 (MQ=60)
                                           CGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTCCATCGCCTGCAACAACATACCGAGAAACACACCA                                                    >  SRR4302540.2815844/1‑94 (MQ=60)
                                            GCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCAC                                                   <  SRR4302540.798679/94‑1 (MQ=60)
                                             CCATTTTGAAGATTCGCGGCGCGTAGTACATGATGATGTTCATTCCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACG                                                  <  SRR4302540.3314453/94‑1 (MQ=60)
                                             CCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACG                                                  >  SRR4302540.1702212/1‑94 (MQ=60)
                                             CCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACG                                                  >  SRR4302540.2886012/1‑94 (MQ=60)
                                             CCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACG                                                  <  SRR4302540.5682523/94‑1 (MQ=60)
                                             CCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACA                                                  >  SRR4302540.4714818/1‑94 (MQ=60)
                                              CATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGA                                                 >  SRR4302540.3964717/1‑94 (MQ=60)
                                              CATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGA                                                 <  SRR4302540.5130679/94‑1 (MQ=60)
                                              CATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGA                                                 <  SRR4302540.420789/94‑1 (MQ=60)
                                              CATTTTGAAGATACGAGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGA                                                 <  SRR4302540.5804153/94‑1 (MQ=60)
                                               ATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGAC                                                >  SRR4302540.6570625/1‑94 (MQ=60)
                                               ATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGAC                                                >  SRR4302540.2379667/1‑94 (MQ=60)
                                               ATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGAC                                                <  SRR4302540.3414776/94‑1 (MQ=60)
                                               ATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGAC                                                >  SRR4302540.1615365/1‑94 (MQ=60)
                                                TTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACG                                               <  SRR4302540.2481510/94‑1 (MQ=60)
                                                  TTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGA                                             <  SRR4302540.687122/94‑1 (MQ=60)
                                                  TTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGA                                             <  SRR4302540.7923285/94‑1 (MQ=60)
                                                   TGGAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGAC                                            <  SRR4302540.4007875/94‑1 (MQ=60)
                                                   TGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGATAAACACAGCACGACGGAC                                            <  SRR4302540.4178960/94‑1 (MQ=60)
                                                   TGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGAC                                            <  SRR4302540.7304242/94‑1 (MQ=60)
                                                   TGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGAC                                            <  SRR4302540.5403329/94‑1 (MQ=60)
                                                   TGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGAC                                            <  SRR4302540.2229668/94‑1 (MQ=60)
                                                     AAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAAAACAGCACGACGGCCGT                                          >  SRR4302540.5271152/1‑94 (MQ=60)
                                                      AGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGCCGGACGTT                                         >  SRR4302540.1256696/1‑94 (MQ=60)
                                                      AGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTT                                         >  SRR4302540.7826910/1‑94 (MQ=60)
                                                      AGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTT                                         >  SRR4302540.7702864/1‑94 (MQ=60)
                                                      AGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTT                                         >  SRR4302540.7826909/1‑94 (MQ=60)
                                                      AGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTT                                         >  SRR4302540.9615281/1‑94 (MQ=60)
                                                      AGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTT                                         >  SRR4302540.7991648/1‑94 (MQ=60)
                                                      AGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTT                                         >  SRR4302540.4595424/1‑94 (MQ=60)
                                                      AGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTT                                         >  SRR4302540.1256695/1‑94 (MQ=60)
                                                        ATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAC                                       >  SRR4302540.910999/1‑94 (MQ=60)
                                                        ATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAC                                       >  SRR4302540.7513447/1‑94 (MQ=60)
                                                        ATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAC                                       >  SRR4302540.9536252/1‑94 (MQ=60)
                                                        ATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAC                                       <  SRR4302540.2920790/94‑1 (MQ=60)
                                                        ATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAC                                       <  SRR4302540.2391068/94‑1 (MQ=60)
                                                         TACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACG                                      <  SRR4302540.4042450/94‑1 (MQ=60)
                                                          ACGCGGCGCGTAGTACATGATGATGTTCATACCTGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGG                                     <  SRR4302540.9795791/94‑1 (MQ=60)
                                                          ACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGG                                     <  SRR4302540.9795793/94‑1 (MQ=60)
                                                          ACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGG                                     >  SRR4302540.7217335/1‑94 (MQ=60)
                                                          ACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGG                                     >  SRR4302540.7217334/1‑94 (MQ=60)
                                                           CGCGGCTCGTAGTACATACTGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACACCATACCGAGAAACACAGCACGACGGACGTTACGGT                                    <  SRR4302540.9084982/94‑1 (MQ=60)
                                                           CGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGT                                    <  SRR4302540.6664110/94‑1 (MQ=60)
                                                           CGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGT                                    >  SRR4302540.471742/1‑94 (MQ=60)
                                                           CGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGT                                    <  SRR4302540.9006929/94‑1 (MQ=60)
                                                             CGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTG                                  >  SRR4302540.9911126/1‑94 (MQ=60)
                                                              GGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGA                                 <  SRR4302540.4562075/94‑1 (MQ=60)
                                                               GCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGAT                                <  SRR4302540.8535251/94‑1 (MQ=60)
                                                                CGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATC                               >  SRR4302540.3121599/1‑94 (MQ=60)
                                                                CGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATC                               <  SRR4302540.2258580/94‑1 (MQ=60)
                                                                   GTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTA                            >  SRR4302540.2619454/1‑94 (MQ=60)
                                                                   GTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTA                            >  SRR4302540.6414780/1‑94 (MQ=60)
                                                                    TAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACTTTACGGTTGATCTTAA                           >  SRR4302540.2877520/1‑94 (MQ=60)
                                                                    TAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAA                           <  SRR4302540.5065432/94‑1 (MQ=60)
                                                                     AGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGGTCTTAAA                          >  SRR4302540.6799908/1‑94 (MQ=60)
                                                                     AGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAA                          <  SRR4302540.5210689/94‑1 (MQ=60)
                                                                      GTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAC                         >  SRR4302540.8707881/1‑94 (MQ=60)
                                                                      GTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAC                         >  SRR4302540.5793427/1‑94 (MQ=60)
                                                                      GTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAC                         <  SRR4302540.6028036/94‑1 (MQ=60)
                                                                      GTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGGTGGTCTTAAAC                         >  SRR4302540.3897793/1‑94 (MQ=60)
                                                                       TACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACA                        <  SRR4302540.7238172/94‑1 (MQ=60)
                                                                       TACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACA                        >  SRR4302540.2904864/1‑94 (MQ=60)
                                                                        ACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAG                       <  SRR4302540.1523779/94‑1 (MQ=60)
                                                                        ACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAG                       >  SRR4302540.1618543/1‑94 (MQ=60)
                                                                        ACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAG                       >  SRR4302540.3404570/1‑94 (MQ=60)
                                                                        ACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAG                       >  SRR4302540.7398778/1‑94 (MQ=60)
                                                                        ACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAG                       <  SRR4302540.398082/94‑1 (MQ=60)
                                                                        ACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAG                       >  SRR4302540.2610137/1‑94 (MQ=60)
                                                                        ACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAG                       <  SRR4302540.1176256/94‑1 (MQ=60)
                                                                        ACATGATGATGGTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGAACGACGGACGTTACGGTTGATCTTAAACAG                       <  SRR4302540.6893201/94‑1 (MQ=60)
                                                                         CATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGT                      <  SRR4302540.9875647/94‑1 (MQ=60)
                                                                         CATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGT                      <  SRR4302540.8405346/94‑1 (MQ=60)
                                                                         CATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGT                      >  SRR4302540.4972809/1‑94 (MQ=60)
                                                                         CATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGT                      <  SRR4302540.774207/94‑1 (MQ=60)
                                                                         CATGATGATATTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGT                      <  SRR4302540.8971893/94‑1 (MQ=60)
                                                                          ATGATGATTTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTG                     <  SRR4302540.3093619/94‑1 (MQ=60)
                                                                          ATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTG                     >  SRR4302540.2147544/1‑94 (MQ=60)
                                                                          ATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTG                     <  SRR4302540.3741371/94‑1 (MQ=60)
                                                                           TGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGC                    <  SRR4302540.4799659/94‑1 (MQ=60)
                                                                           TGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGC                    >  SRR4302540.1879159/1‑94 (MQ=60)
                                                                            TATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCC                   >  SRR4302540.4081049/1‑94 (MQ=60)
                                                                             ATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCC                  >  SRR4302540.9568652/1‑94 (MQ=60)
                                                                             ATGATCTTCATACCGGTAAACTGCTGCATCTCCTGCAACAACATGCCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCC                  <  SRR4302540.2981658/94‑1 (MQ=60)
                                                                              TTATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCA                 <  SRR4302540.5002034/94‑1 (MQ=60)
                                                                               GATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAA                >  SRR4302540.5037299/1‑94 (MQ=60)
                                                                                ATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAC               >  SRR4302540.3726093/1‑94 (MQ=60)
                                                                                ATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGAGCTTAAACAGTGCCCAAC               >  SRR4302540.9070422/1‑94 (MQ=60)
                                                                                 TGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACC              <  SRR4302540.3108646/94‑1 (MQ=60)
                                                                                 TGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACC              <  SRR4302540.8076890/94‑1 (MQ=60)
                                                                                 TGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACC              >  SRR4302540.8053751/1‑94 (MQ=60)
                                                                                  GTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCG             >  SRR4302540.2248958/1‑94 (MQ=60)
                                                                                   TTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGC            >  SRR4302540.570941/1‑94 (MQ=60)
                                                                                   TTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGC            >  SRR4302540.7342415/1‑94 (MQ=60)
                                                                                   TTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGC            >  SRR4302540.5024891/1‑94 (MQ=60)
                                                                                     CATACCGGCAAACTGCTGCATCGCCTGCAACAACATACTGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCC          >  SRR4302540.4243524/1‑94 (MQ=60)
                                                                                     CATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCC          <  SRR4302540.5557321/94‑1 (MQ=60)
                                                                                     CATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCC          >  SRR4302540.4243523/1‑94 (MQ=60)
                                                                                      ATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCT         >  SRR4302540.8299088/1‑94 (MQ=60)
                                                                                      ATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCT         <  SRR4302540.9680561/94‑1 (MQ=60)
                                                                                      ATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCT         >  SRR4302540.5441326/1‑94 (MQ=60)
                                                                                      ATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCT         <  SRR4302540.8780374/94‑1 (MQ=60)
                                                                                      ATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCT         >  SRR4302540.2518426/1‑94 (MQ=60)
                                                                                        ACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGT       >  SRR4302540.1955181/1‑94 (MQ=60)
                                                                                        ACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGT       >  SRR4302540.4843921/1‑94 (MQ=60)
                                                                                            GCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTTTTA   <  SRR4302540.6951510/94‑1 (MQ=60)
                                                                                             CAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTTTTAA  <  SRR4302540.6020401/94‑1 (MQ=60)
                                                                                             CAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTTTTAA  <  SRR4302540.7466675/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGACCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTTTTAA  >  NC_000913/2979298‑2979484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑