Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,968,566 A→G L287L (TTA→TTG)  wecB → UDP‑N‑acetyl glucosamine ‑2‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,968,5660AG99.3% 1389.5 / ‑2.5 432L287L (TTA→TTG) wecBUDP‑N‑acetyl glucosamine ‑2‑epimerase
Reads supporting (aligned to +/- strand):  ref base A (3/0);  new base G (223/205);  total (226/206)
Fisher's exact test for biased strand distribution p-value = 2.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.84e-01

Only 100 of 446 total aligned reads displayed.

GGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGT  >  NC_000913/3968476‑3968655
                                                                                          |                                                                                         
ggTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGcc                                                                                         <  1:4042089/93‑1 (MQ=255)
 gTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCg                                                                                        <  2:2988006/93‑1 (MQ=255)
   gCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGtt                                                                                      <  1:7137256/93‑1 (MQ=255)
    cATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGttt                                                                                     >  2:7362592/1‑93 (MQ=255)
     aTCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTg                                                                                    >  2:3755039/1‑93 (MQ=255)
     aTCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTg                                                                                    >  1:3268807/1‑93 (MQ=255)
       ctcAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGGCGTTTGTc                                                                                  <  1:6308435/93‑1 (MQ=255)
       ctcAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTc                                                                                  >  1:9989949/1‑93 (MQ=255)
       ctcAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTc                                                                                  >  1:4285390/1‑93 (MQ=255)
        tcAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCt                                                                                 <  2:568729/93‑1 (MQ=255)
            cccGAACGTCAGAGAACCGATCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCt                                                                             <  2:7566639/93‑1 (MQ=255)
             ccGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtg                                                                            >  1:10005844/1‑93 (MQ=255)
              cGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtga                                                                           >  2:3864161/1‑93 (MQ=255)
              cGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtga                                                                           <  2:1949652/93‑1 (MQ=255)
              cGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtga                                                                           <  1:7817739/93‑1 (MQ=255)
               gAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtgat                                                                          >  2:7705531/1‑93 (MQ=255)
                aaCGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtgatg                                                                         >  2:6560653/1‑93 (MQ=255)
                aaCGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtgatg                                                                         <  1:9369656/93‑1 (MQ=255)
                aaCGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtgatg                                                                         >  2:5056183/1‑93 (MQ=255)
                aaCGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTTGTCTGGCtgatg                                                                         >  2:1776039/1‑93 (MQ=255)
                 aCGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCtgatga                                                                        >  2:8361591/1‑93 (MQ=255)
                  ggTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGaa                                                                       <  2:8678093/92‑1 (MQ=255)
                    tCAGAGAACCGGTCAATCGTATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATGTGCCGTTTTTCTGGCTGATGAAcc                                                                     >  1:8963797/1‑93 (MQ=255)
                    tCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAAcc                                                                     <  2:8031106/93‑1 (MQ=255)
                    tCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAAcc                                                                     >  1:9448180/1‑93 (MQ=255)
                     cAGAGAACCGGTCAATCGCATTCTTGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCa                                                                    <  1:5828040/93‑1 (MQ=255)
                      agagAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCACAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCAc                                                                   >  1:1523131/1‑93 (MQ=255)
                        agaACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGc                                                                 <  1:676397/93‑1 (MQ=255)
                        agaACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGc                                                                 <  2:60038/93‑1 (MQ=255)
                        agaACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGc                                                                 <  1:3385199/93‑1 (MQ=255)
                          aaCCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCt                                                               <  2:5790528/93‑1 (MQ=255)
                          aaCCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCt                                                               <  1:7304534/93‑1 (MQ=255)
                          aaCCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCt                                                               >  1:6988564/1‑93 (MQ=255)
                            ccGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTgg                                                             <  2:3102220/93‑1 (MQ=255)
                             cGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGc                                                            >  1:993655/1‑93 (MQ=255)
                              ggTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCt                                                           >  2:7866167/1‑93 (MQ=255)
                                tCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGa                                                         >  2:6092857/1‑93 (MQ=255)
                                tCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGa                                                         >  1:4424928/1‑93 (MQ=255)
                                tCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGa                                                         >  2:1550490/1‑93 (MQ=255)
                                 cAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGAt                                                        >  2:2210831/1‑93 (MQ=255)
                                 cAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGAt                                                        >  1:2277463/1‑93 (MQ=255)
                                 cAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGAt                                                        <  2:2459789/93‑1 (MQ=255)
                                 cAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGAt                                                        >  1:1622301/1‑93 (MQ=255)
                                  aaTCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGAtt                                                       <  1:5503031/93‑1 (MQ=255)
                                  aaTCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGAtt                                                       <  1:8436009/93‑1 (MQ=255)
                                    tCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGAtttt                                                     >  1:6802324/1‑93 (MQ=255)
                                     cGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTg                                                    <  1:749305/93‑1 (MQ=255)
                                     cGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGGATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTg                                                    >  2:6755288/1‑93 (MQ=255)
                                       cATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGAc                                                  >  1:5962956/1‑93 (MQ=255)
                                         ttCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCg                                                >  1:5085079/1‑93 (MQ=255)
                                         ttCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCg                                                >  2:4178757/1‑93 (MQ=255)
                                         ttCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCg                                                <  2:7615938/93‑1 (MQ=255)
                                          tCTGGGGGATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGTTGATTTTGACCGa                                               <  2:979559/93‑1 (MQ=255)
                                          tCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGa                                               >  1:1070387/1‑93 (MQ=255)
                                            tGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACt                                             >  1:1405856/1‑93 (MQ=255)
                                               ggCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAg                                          >  1:365832/1‑93 (MQ=255)
                                               ggCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAg                                          <  2:9259392/93‑1 (MQ=255)
                                                gCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAgg                                         >  1:6042756/1‑93 (MQ=255)
                                                 cATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAggc                                        >  1:6453610/1‑93 (MQ=255)
                                                    gtgAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAggcggc                                     <  2:1410006/93‑1 (MQ=255)
                                                     tgAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCa                                    <  1:1923850/93‑1 (MQ=255)
                                                        aaaaTGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTc                                 <  1:4884513/93‑1 (MQ=255)
                                                          aaTGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGGTTTTGACCGACTCAGGAGGCATTCAg                               >  2:6362186/1‑93 (MQ=255)
                                                          aaTGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAg                               >  1:5290357/1‑93 (MQ=255)
                                                           aTGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAgg                              >  1:123728/1‑93 (MQ=255)
                                                           aTGTCATCCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAgg                              <  2:913024/93‑1 (MQ=255)
                                                            tGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGga                             >  1:218341/1‑93 (MQ=255)
                                                             gTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGgaa                            >  2:9556799/1‑93 (MQ=255)
                                                              tCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGgaag                           >  1:3018754/1‑93 (MQ=255)
                                                                aTTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCGCGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGgaagaa                         <  2:6934511/93‑1 (MQ=255)
                                                                aTTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGgaagaa                         <  2:4378459/93‑1 (MQ=255)
                                                                aTTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGgaagaa                         <  1:8697086/93‑1 (MQ=255)
                                                                aTTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGgaagaa                         >  1:3565189/1‑93 (MQ=255)
                                                                 ttCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGGATTCAGGaagaag                        >  1:9542350/1‑93 (MQ=255)
                                                                 ttCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGaagaag                        <  1:5639764/93‑1 (MQ=255)
                                                                  tCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAgc                       <  2:2686299/93‑1 (MQ=255)
                                                                     gatcgatcCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGcc                    <  1:4780551/93‑1 (MQ=255)
                                                                       tcgatcCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCtt                  >  1:3882498/1‑93 (MQ=255)
                                                                        cgatcCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTc                 >  1:8008703/1‑93 (MQ=255)
                                                                           tcCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCt              >  2:4695752/1‑93 (MQ=255)
                                                                            tcccAGGAGTATTTGCCGTTTGTCTGGGTGATGAACCACGCCGGGCTGATTTTGACCGGCTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTg             <  1:1728829/92‑1 (MQ=255)
                                                                             cccAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGTCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTgg            <  2:4797298/93‑1 (MQ=255)
                                                                             cccAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTgg            <  1:2513478/93‑1 (MQ=255)
                                                                             cccAGGAGTATTGGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTgg            <  2:1678966/93‑1 (MQ=255)
                                                                              ccAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTggg           >  2:8953488/1‑93 (MQ=255)
                                                                                aGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCTGGAAGAAGCGCCTTCGCTGGGGa         >  2:5522056/1‑93 (MQ=255)
                                                                                 ggAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGaa        >  2:5255082/1‑93 (MQ=255)
                                                                                  gAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGaaa       >  1:8180277/1‑93 (MQ=255)
                                                                                   aGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAAc      <  1:1107753/93‑1 (MQ=255)
                                                                                   aGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAAc      <  2:3562321/93‑1 (MQ=255)
                                                                                    gTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAAcc     >  2:7196263/1‑93 (MQ=255)
                                                                                    gTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAAcc     <  1:2441348/93‑1 (MQ=255)
                                                                                    gTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAAcc     <  1:4182680/93‑1 (MQ=255)
                                                                                    gTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAAcc     <  2:8186183/93‑1 (MQ=255)
                                                                                    gTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAAcc     >  1:4805480/1‑93 (MQ=255)
                                                                                     tATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCt    >  1:2765120/1‑93 (MQ=255)
                                                                                     tATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCt    >  2:1165276/1‑93 (MQ=255)
                                                                                     tATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCt    >  1:9178564/1‑93 (MQ=255)
                                                                                      aTTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCtg   <  2:3848828/93‑1 (MQ=255)
                                                                                       tttGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCtgt  >  1:4073020/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGT  >  NC_000913/3968476‑3968655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 259 total aligned reads displayed.
CCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCTG  >  NC_000913/3968474‑3968659
                                                                                            |                                                                                             
CCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGC                                                                                              <  SRR4302540.3932654/94‑1 (MQ=60)
 CGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCC                                                                                             >  SRR4302540.6096944/1‑94 (MQ=60)
 CGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCC                                                                                             <  SRR4302540.8818553/94‑1 (MQ=60)
  GGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCG                                                                                            <  SRR4302540.4085661/94‑1 (MQ=60)
  GGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGGATTTGCCG                                                                                            >  SRR4302540.8963052/1‑94 (MQ=60)
     GCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTT                                                                                         <  SRR4302540.7216774/94‑1 (MQ=60)
     GCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTT                                                                                         >  SRR4302540.1118094/1‑94 (MQ=60)
     GCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTT                                                                                         <  SRR4302540.6850670/94‑1 (MQ=60)
      CATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTG                                                                                        <  SRR4302540.1146148/94‑1 (MQ=60)
      CATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTG                                                                                        >  SRR4302540.3304481/1‑94 (MQ=60)
       ATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCTTTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGT                                                                                       >  SRR4302540.2430651/1‑94 (MQ=60)
       ATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGT                                                                                       >  SRR4302540.2252673/1‑94 (MQ=60)
       ATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGT                                                                                       >  SRR4302540.6475817/1‑94 (MQ=60)
       ATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGT                                                                                       <  SRR4302540.5142650/94‑1 (MQ=60)
       ATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGC                                                                                       >  SRR4302540.3362666/1‑94 (MQ=60)
        TCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTC                                                                                      <  SRR4302540.2961900/94‑1 (MQ=60)
        TCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTC                                                                                      >  SRR4302540.4332003/1‑94 (MQ=60)
         CTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGGCGTTTGTCT                                                                                     <  SRR4302540.6378683/94‑1 (MQ=60)
         CTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCT                                                                                     <  SRR4302540.9956841/94‑1 (MQ=60)
          TCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTG                                                                                    <  SRR4302540.8962393/94‑1 (MQ=60)
           CAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGG                                                                                   <  SRR4302540.8232997/94‑1 (MQ=60)
            AACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGC                                                                                  >  SRR4302540.231376/1‑94 (MQ=60)
             ACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCT                                                                                 <  SRR4302540.10139945/94‑1 (MQ=60)
              CCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTG                                                                                >  SRR4302540.10122382/1‑94 (MQ=60)
               CCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGA                                                                               >  SRR4302540.7072002/1‑94 (MQ=60)
               CCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGA                                                                               >  SRR4302540.10098694/1‑94 (MQ=60)
                CGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGAT                                                                              <  SRR4302540.7909103/94‑1 (MQ=60)
                CGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGAT                                                                              <  SRR4302540.1311455/94‑1 (MQ=60)
                CGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGAT                                                                              >  SRR4302540.7363520/1‑94 (MQ=60)
                CGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGAT                                                                              <  SRR4302540.522507/94‑1 (MQ=60)
                CGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGAT                                                                              <  SRR4302540.7069860/94‑1 (MQ=60)
                 GAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGTAGTATTTGCCGTTTGTCTGGCTGATG                                                                             <  SRR4302540.1525/94‑1 (MQ=60)
                 GAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATG                                                                             <  SRR4302540.7492988/94‑1 (MQ=60)
                 GAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATG                                                                             >  SRR4302540.3111358/1‑94 (MQ=60)
                 GAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGGATTTGCCGTTTGTCTGGCTGATG                                                                             >  SRR4302540.2415455/1‑94 (MQ=60)
                  AACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGA                                                                            >  SRR4302540.8471549/1‑94 (MQ=60)
                    CGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAAC                                                                          >  SRR4302540.241472/1‑94 (MQ=60)
                    CGTAAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAAC                                                                          >  SRR4302540.2494691/1‑94 (MQ=60)
                     GTCAGAGAACCGGTCAATCGTATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATGTGCCGTTTTTCTGGCTGATGAACC                                                                         >  SRR4302540.9069955/1‑94 (MQ=60)
                     GTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACC                                                                         >  SRR4302540.9560340/1‑94 (MQ=60)
                      TCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCA                                                                        >  SRR4302540.4201801/1‑94 (MQ=60)
                      TCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCA                                                                        >  SRR4302540.1214524/1‑94 (MQ=60)
                       CAGAGAACCGGTCAATCGCATTCTTGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCAC                                                                       <  SRR4302540.5892470/94‑1 (MQ=60)
                       CAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCAC                                                                       <  SRR4302540.249494/94‑1 (MQ=60)
                        AGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACG                                                                      >  SRR4302540.9518576/1‑94 (MQ=60)
                        AGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACG                                                                      <  SRR4302540.1538810/94‑1 (MQ=60)
                         GAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGGATTTGCCGTTTGTCTGGCTGATGAACCACGC                                                                     >  SRR4302540.1992911/1‑94 (MQ=60)
                          AGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCC                                                                    <  SRR4302540.683637/94‑1 (MQ=60)
                          AGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCC                                                                    <  SRR4302540.6132470/94‑1 (MQ=60)
                           GAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCT                                                                   >  SRR4302540.7066148/1‑94 (MQ=60)
                           GAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCT                                                                   <  SRR4302540.1277652/94‑1 (MQ=60)
                           GAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCT                                                                   >  SRR4302540.2919184/1‑94 (MQ=60)
                            AACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTG                                                                  <  SRR4302540.7386073/94‑1 (MQ=60)
                            AACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTG                                                                  <  SRR4302540.7717795/94‑1 (MQ=60)
                             ACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGG                                                                 >  SRR4302540.9838598/1‑94 (MQ=60)
                             ACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGG                                                                 <  SRR4302540.7455323/94‑1 (MQ=60)
                              CCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGC                                                                >  SRR4302540.3399914/1‑94 (MQ=60)
                              CCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGC                                                                >  SRR4302540.1003778/1‑94 (MQ=60)
                               CGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCT                                                               <  SRR4302540.2752600/94‑1 (MQ=60)
                               CGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCT                                                               <  SRR4302540.8660982/94‑1 (MQ=60)
                                 GTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGA                                                             >  SRR4302540.5657669/1‑94 (MQ=60)
                                 GTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGA                                                             >  SRR4302540.4472869/1‑94 (MQ=60)
                                  TCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGAT                                                            >  SRR4302540.1640081/1‑94 (MQ=60)
                                    AATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTT                                                          >  SRR4302540.5415794/1‑94 (MQ=60)
                                    AATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTT                                                          >  SRR4302540.4842257/1‑94 (MQ=60)
                                    AATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTT                                                          <  SRR4302540.5563641/94‑1 (MQ=60)
                                    AATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTT                                                          <  SRR4302540.79229/94‑1 (MQ=60)
                                    AATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTT                                                          <  SRR4302540.8533950/94‑1 (MQ=60)
                                     ATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTT                                                         >  SRR4302540.6877586/1‑94 (MQ=60)
                                     ATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTT                                                         >  SRR4302540.6877584/1‑94 (MQ=60)
                                      TCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTG                                                        <  SRR4302540.7325334/94‑1 (MQ=60)
                                      TCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTG                                                        >  SRR4302540.9633867/1‑94 (MQ=60)
                                       CGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGA                                                       <  SRR4302540.757283/94‑1 (MQ=60)
                                       CGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGA                                                       >  SRR4302540.9623333/1‑94 (MQ=60)
                                       CGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGA                                                       <  SRR4302540.757284/94‑1 (MQ=60)
                                        GCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGAC                                                      >  SRR4302540.4679064/1‑94 (MQ=60)
                                        GCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGAC                                                      >  SRR4302540.6028929/1‑94 (MQ=60)
                                        GCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGAC                                                      <  SRR4302540.8229220/94‑1 (MQ=60)
                                         CATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACC                                                     <  SRR4302540.170302/94‑1 (MQ=60)
                                          ATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCG                                                    >  SRR4302540.5140055/1‑94 (MQ=60)
                                          ATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCG                                                    >  SRR4302540.837898/1‑94 (MQ=60)
                                          ATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCG                                                    >  SRR4302540.4155909/1‑94 (MQ=60)
                                          ATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCG                                                    <  SRR4302540.1989480/94‑1 (MQ=60)
                                          ATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCG                                                    >  SRR4302540.5860408/1‑94 (MQ=60)
                                          ATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCG                                                    >  SRR4302540.1699472/1‑94 (MQ=60)
                                           TTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGA                                                   >  SRR4302540.1081298/1‑94 (MQ=60)
                                           TTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGA                                                   >  SRR4302540.5311315/1‑94 (MQ=60)
                                             CTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACT                                                 >  SRR4302540.1420994/1‑94 (MQ=60)
                                             CTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACT                                                 >  SRR4302540.5778428/1‑94 (MQ=60)
                                                GGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAG                                              >  SRR4302540.4983848/1‑94 (MQ=60)
                                                GGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAG                                              >  SRR4302540.9548634/1‑94 (MQ=60)
                                                GGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAG                                              <  SRR4302540.5494596/94‑1 (MQ=60)
                                                GGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAG                                              <  SRR4302540.5701790/94‑1 (MQ=60)
                                                GGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAG                                              >  SRR4302540.369600/1‑94 (MQ=60)
                                                GGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAG                                              >  SRR4302540.369601/1‑94 (MQ=60)
                                                 GGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGG                                             >  SRR4302540.5018501/1‑94 (MQ=60)
                                                 GGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGG                                             >  SRR4302540.9023267/1‑94 (MQ=60)
                                                 GGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGG                                             >  SRR4302540.6109873/1‑94 (MQ=60)
                                                  GCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGC                                            <  SRR4302540.4435161/94‑1 (MQ=60)
                                                  GCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGC                                            >  SRR4302540.6565705/1‑94 (MQ=60)
                                                  GCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGC                                            >  SRR4302540.6525448/1‑94 (MQ=60)
                                                  GCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGC                                            >  SRR4302540.1459749/1‑94 (MQ=60)
                                                   CATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCG                                           >  SRR4302540.5934807/1‑94 (MQ=60)
                                                   CATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCG                                           <  SRR4302540.6026835/94‑1 (MQ=60)
                                                    ATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGG                                          >  SRR4302540.2540050/1‑94 (MQ=60)
                                                    ATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGG                                          >  SRR4302540.7780067/1‑94 (MQ=60)
                                                    ATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGG                                          >  SRR4302540.18219/1‑94 (MQ=60)
                                                    ATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGG                                          >  SRR4302540.867516/1‑94 (MQ=60)
                                                    ATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGG                                          >  SRR4302540.4397900/1‑94 (MQ=60)
                                                     TGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGC                                         >  SRR4302540.6456122/1‑94 (MQ=60)
                                                       TGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCAT                                       >  SRR4302540.9223853/1‑94 (MQ=60)
                                                       TGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCAT                                       <  SRR4302540.3549212/94‑1 (MQ=60)
                                                         AAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTC                                     >  SRR4302540.4835742/1‑94 (MQ=60)
                                                         AAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTC                                     <  SRR4302540.3590165/94‑1 (MQ=60)
                                                         AAAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTC                                     >  SRR4302540.4619093/1‑94 (MQ=60)
                                                          AAAATGTCGTTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCA                                    <  SRR4302540.1541411/94‑1 (MQ=60)
                                                          AAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCA                                    <  SRR4302540.4936984/94‑1 (MQ=60)
                                                          AAAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCA                                    >  SRR4302540.6214059/1‑94 (MQ=60)
                                                           AAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAG                                   >  SRR4302540.5348190/1‑94 (MQ=60)
                                                           AAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAG                                   <  SRR4302540.4908486/94‑1 (MQ=60)
                                                           AAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAG                                   >  SRR4302540.10088294/1‑94 (MQ=60)
                                                           AAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAG                                   <  SRR4302540.4023911/94‑1 (MQ=60)
                                                           AAATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAG                                   >  SRR4302540.983593/1‑94 (MQ=60)
                                                            AATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGG                                  >  SRR4302540.677167/1‑94 (MQ=60)
                                                            AATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGG                                  >  SRR4302540.5906309/1‑94 (MQ=60)
                                                            AATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGG                                  >  SRR4302540.125046/1‑94 (MQ=60)
                                                             ATGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGA                                 >  SRR4302540.6280190/1‑94 (MQ=60)
                                                              TGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAA                                >  SRR4302540.6039167/1‑94 (MQ=60)
                                                              TGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAA                                <  SRR4302540.4915828/94‑1 (MQ=60)
                                                              AGTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAA                                <  SRR4302540.4915543/94‑1 (MQ=60)
                                                               GTCATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAG                               <  SRR4302540.2737372/94‑1 (MQ=60)
                                                                TCAGTCTGATCGATCCCAAGGAGTATGTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGA                              <  SRR4302540.6700069/94‑1 (MQ=60)
                                                                 CATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAA                             <  SRR4302540.3231891/94‑1 (MQ=60)
                                                                 CATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAA                             <  SRR4302540.3942680/94‑1 (MQ=60)
                                                                 CATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTATGGCTGATGAACCACGCCGGGCTGATTTTGCCCGACTGAGGCGccacgcagagagaa                             >  SRR4302540.3604139/1‑80 (MQ=60)
                                                                  ATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGGATTCAGGAAGAAG                            >  SRR4302540.9655259/1‑94 (MQ=60)
                                                                  ATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAG                            <  SRR4302540.4425097/94‑1 (MQ=60)
                                                                  ATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAG                            >  SRR4302540.121328/1‑94 (MQ=60)
                                                                  ATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAG                            <  SRR4302540.8798048/94‑1 (MQ=60)
                                                                  ATTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAG                            >  SRR4302540.1115647/1‑94 (MQ=60)
                                                                   TTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGC                           <  SRR4302540.4122272/94‑1 (MQ=60)
                                                                   TTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGC                           <  SRR4302540.2230770/94‑1 (MQ=60)
                                                                   TTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGC                           <  SRR4302540.3711148/94‑1 (MQ=60)
                                                                   TTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGC                           <  SRR4302540.1935397/94‑1 (MQ=60)
                                                                   TTCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGC                           <  SRR4302540.5701838/94‑1 (MQ=60)
                                                                    TCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCG                          <  SRR4302540.833054/94‑1 (MQ=60)
                                                                    TCTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAAAAGCG                          >  SRR4302540.1042624/1‑94 (MQ=60)
                                                                     CTGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGC                         >  SRR4302540.1546726/1‑94 (MQ=60)
                                                                      TGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCC                        <  SRR4302540.1995280/94‑1 (MQ=60)
                                                                      TGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCC                        >  SRR4302540.2100586/1‑94 (MQ=60)
                                                                      TGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCC                        <  SRR4302540.4096873/94‑1 (MQ=60)
                                                                      TGATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCC                        >  SRR4302540.3458784/1‑94 (MQ=60)
                                                                       GATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCT                       >  SRR4302540.10061162/1‑94 (MQ=60)
                                                                       GATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCT                       <  SRR4302540.4831643/94‑1 (MQ=60)
                                                                        ATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTT                      >  SRR4302540.3924681/1‑94 (MQ=60)
                                                                        ATCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTT                      <  SRR4302540.9211590/94‑1 (MQ=60)
                                                                        AGCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTT                      <  SRR4302540.9350943/94‑1 (MQ=60)
                                                                         TCGATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTC                     >  SRR4302540.8101882/1‑94 (MQ=60)
                                                                          CGATCCCCAGGAGTATTTTCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCG                    <  SRR4302540.3676316/94‑1 (MQ=60)
                                                                            ATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCT                  >  SRR4302540.792612/1‑94 (MQ=60)
                                                                            ATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCT                  >  SRR4302540.368221/1‑94 (MQ=60)
                                                                            ATCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCT                  <  SRR4302540.1889902/94‑1 (MQ=60)
                                                                             TCCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTG                 >  SRR4302540.155284/1‑94 (MQ=60)
                                                                              CCCCAGGATTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGG                <  SRR4302540.1747486/94‑1 (MQ=60)
                                                                              CCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGG                <  SRR4302540.3650653/94‑1 (MQ=60)
                                                                              CCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGG                <  SRR4302540.7015631/94‑1 (MQ=60)
                                                                              CCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGG                <  SRR4302540.3160938/94‑1 (MQ=60)
                                                                              CCCCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCACTCAGGAAGAAGCGCCTTCGCTGG                >  SRR4302540.4037275/1‑94 (MQ=60)
                                                                                CCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGG              <  SRR4302540.9480997/94‑1 (MQ=60)
                                                                                CCAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGG              >  SRR4302540.3030494/1‑94 (MQ=60)
                                                                                 CAGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGA             <  SRR4302540.9327503/94‑1 (MQ=60)
                                                                                  AGGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAA            <  SRR4302540.9513347/94‑1 (MQ=60)
                                                                                   GGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAA           >  SRR4302540.2257468/1‑94 (MQ=60)
                                                                                   GGAGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAA           >  SRR4302540.8275293/1‑94 (MQ=60)
                                                                                     AGTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACC         >  SRR4302540.4856912/1‑94 (MQ=60)
                                                                                      GTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCT        >  SRR4302540.9288648/1‑94 (MQ=60)
                                                                                      GTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCT        <  SRR4302540.4228123/94‑1 (MQ=60)
                                                                                      GTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCT        >  SRR4302540.5638479/1‑94 (MQ=60)
                                                                                      GTATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAAACT        >  SRR4302540.1103330/1‑94 (MQ=60)
                                                                                       TATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTG       <  SRR4302540.4268537/94‑1 (MQ=60)
                                                                                        ATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGT      <  SRR4302540.7005765/94‑1 (MQ=60)
                                                                                        ATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGT      >  SRR4302540.4116924/1‑94 (MQ=60)
                                                                                        ATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGT      <  SRR4302540.3377512/94‑1 (MQ=60)
                                                                                        ATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGT      >  SRR4302540.718456/1‑94 (MQ=60)
                                                                                        ATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGT      <  SRR4302540.2573875/94‑1 (MQ=60)
                                                                                        ATTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGAGCCTTCGCTGGGGAAACCTGT      >  SRR4302540.4116923/1‑94 (MQ=60)
                                                                                         TTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCGGGAAGAAGCGCCTTCGCTGGGGAAACCTGTG     <  SRR4302540.4243264/94‑1 (MQ=60)
                                                                                         TTTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTG     >  SRR4302540.1419357/1‑94 (MQ=60)
                                                                                          TTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTTATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGC    <  SRR4302540.3004572/94‑1 (MQ=60)
                                                                                          TTGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGC    <  SRR4302540.3004571/94‑1 (MQ=60)
                                                                                          TTGCCGTTTGTATGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGC    <  SRR4302540.7291978/94‑1 (MQ=60)
                                                                                           TGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCT   >  SRR4302540.2952854/1‑94 (MQ=60)
                                                                                           TGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCT   >  SRR4302540.2952853/1‑94 (MQ=60)
                                                                                           TGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCT   >  SRR4302540.7986937/1‑94 (MQ=60)
                                                                                           TGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCT   <  SRR4302540.8071289/94‑1 (MQ=60)
                                                                                           TGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCT   >  SRR4302540.1435494/1‑94 (MQ=60)
                                                                                           TGCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCT   >  SRR4302540.1435495/1‑94 (MQ=60)
                                                                                           TGCCGTTTGGCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCT   <  SRR4302540.8812394/94‑1 (MQ=60)
                                                                                            GCCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCTG  <  SRR4302540.4775411/94‑1 (MQ=60)
                                                                                            GCCGTTTGTCGGGCTGATGAGCCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCTG  <  SRR4302540.4775410/94‑1 (MQ=60)
                                                                                            |                                                                                             
CCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCTG  >  NC_000913/3968474‑3968659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑