Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,013,772 +C intergenic (‑53/‑246) ysgA ← / → udp hypothetical protein/uridine phosphorylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,013,7701.C99.6% 1745.3 / ‑2.6 536intergenic (‑51/‑248)ysgA/udphypothetical protein/uridine phosphorylase
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base C (305/229);  total (306/230)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 584 total aligned reads displayed.

GCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTG  >  NC_000913/4013679‑4013857
                                                                                             |                                                                                       
gcgTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTa                                                                                          >  1:8980946/1‑93 (MQ=255)
gcgTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTa                                                                                          >  2:6215238/1‑93 (MQ=255)
  gtcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑cc                                                                                       <  2:4976417/93‑1 (MQ=255)
   tcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccc                                                                                      >  1:923658/1‑92 (MQ=255)
   tcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccc                                                                                      <  2:8923418/93‑2 (MQ=255)
   tcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccc                                                                                      >  1:2213872/1‑92 (MQ=255)
     gtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑CCCta                                                                                    >  2:9317503/1‑93 (MQ=255)
      tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctta                                                                                   >  2:6892587/1‑89 (MQ=255)
      tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctta                                                                                   >  1:8469422/1‑89 (MQ=255)
      tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctta                                                                                   >  2:8265635/1‑89 (MQ=255)
      tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctta                                                                                   >  2:9492876/1‑89 (MQ=255)
      tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGCGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctta                                                                                   <  2:7735448/93‑5 (MQ=255)
         ggggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaa                                                                                 >  2:6668144/1‑93 (MQ=255)
         ggggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaa                                                                                 <  1:1663747/93‑1 (MQ=255)
         ggggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaa                                                                                 >  2:3854621/1‑93 (MQ=255)
          gggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaa                                                                                >  2:4513957/1‑93 (MQ=255)
          gagTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaa                                                                                <  1:1094042/91‑1 (MQ=255)
            gTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaaa                                                                              >  2:2795772/1‑93 (MQ=255)
            gTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaaa                                                                              >  2:9125795/1‑93 (MQ=255)
             tCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAAt                                                                             >  2:9695605/1‑93 (MQ=255)
             tCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAAt                                                                             >  2:1020941/1‑93 (MQ=255)
               tGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGt                                                                           >  1:7633785/1‑93 (MQ=255)
               tGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGt                                                                           <  2:8055077/93‑1 (MQ=255)
                 aaCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTg                                                                         >  1:6513178/1‑93 (MQ=255)
                 aaCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTg                                                                         >  1:6453912/1‑93 (MQ=255)
                  aCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTgc                                                                        >  2:8690081/1‑93 (MQ=255)
                     aTGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCa                                                                     <  1:10030753/93‑1 (MQ=255)
                     aTGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCa                                                                     >  1:3128041/1‑93 (MQ=255)
                     aTGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCa                                                                     >  2:5287154/1‑93 (MQ=255)
                      tGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCat                                                                    >  2:5724414/1‑92 (MQ=255)
                      tGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCaa                                                                    <  2:8164216/93‑1 (MQ=255)
                       ggTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAAt                                                                   <  1:270706/93‑1 (MQ=255)
                        gTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATg                                                                  <  2:1561281/93‑1 (MQ=255)
                        gTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATg                                                                  <  2:3139691/93‑1 (MQ=255)
                         tCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGt                                                                 >  1:6927078/1‑93 (MQ=255)
                          cGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGtt                                                                <  1:1865681/93‑1 (MQ=255)
                          cGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGtt                                                                <  1:466916/93‑1 (MQ=255)
                             aGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTaat                                                             >  1:7756905/1‑92 (MQ=255)
                             aGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAAc                                                             <  1:9615228/93‑1 (MQ=255)
                             aGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAAc                                                             <  2:1181032/93‑1 (MQ=255)
                             aGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAAc                                                             >  1:7458368/1‑93 (MQ=255)
                             aGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAAc                                                             >  1:3640485/1‑93 (MQ=255)
                               cGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACta                                                           >  2:885433/1‑93 (MQ=255)
                                 agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACtata                                                         <  2:2414420/93‑1 (MQ=255)
                                 agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACtata                                                         <  2:2023467/93‑1 (MQ=255)
                                 agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACtata                                                         >  1:5186471/1‑93 (MQ=255)
                                    ggcgaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTc                                                      >  1:5537832/5‑93 (MQ=255)
                                    ggcgaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTc                                                      >  1:6324193/5‑93 (MQ=255)
                                     gcgaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCa                                                     >  2:6465469/4‑93 (MQ=255)
                                       gaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGc                                                   >  1:1437044/2‑93 (MQ=255)
                                        aTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCa                                                  <  1:1550403/93‑1 (MQ=255)
                                            agcagGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTTAGCATGca                                              >  2:5475031/1‑93 (MQ=255)
                                            agcagGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGca                                              >  2:4283448/1‑93 (MQ=255)
                                             gcagGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGcaa                                             >  1:7020762/1‑93 (MQ=255)
                                              gagGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGcaac                                            <  1:7906822/92‑1 (MQ=255)
                                              cagGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGcaac                                            >  1:2106103/1‑93 (MQ=255)
                                               agGTTCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGcaaca                                           <  1:9771054/93‑1 (MQ=255)
                                                ggTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGcaacaa                                          >  1:531115/1‑93 (MQ=255)
                                                 gTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACaaa                                         >  2:3022684/1‑93 (MQ=255)
                                                   gCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATc                                       <  2:2063451/93‑1 (MQ=255)
                                                   gCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATc                                       <  1:9367321/93‑1 (MQ=255)
                                                   gCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATc                                       <  2:469943/93‑1 (MQ=255)
                                                   gCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATc                                       <  2:3082913/93‑1 (MQ=255)
                                                   gCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATc                                       >  1:3779813/1‑93 (MQ=255)
                                                    cAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATca                                      >  2:1924498/1‑93 (MQ=255)
                                                      aaTCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATcaca                                    <  1:2603379/93‑1 (MQ=255)
                                                       aTCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAt                                   <  2:4006958/93‑1 (MQ=255)
                                                        tCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAtt                                  >  1:8037888/1‑93 (MQ=255)
                                                          cAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGc                                <  1:583274/93‑1 (MQ=255)
                                                           aGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGcc                               >  2:8388281/1‑93 (MQ=255)
                                                           aGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGcc                               >  1:2932610/1‑93 (MQ=255)
                                                           aGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGcc                               >  2:5062798/1‑93 (MQ=255)
                                                           aGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGcc                               <  2:7903131/93‑1 (MQ=255)
                                                            gATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGccg                              >  1:1328497/1‑92 (MQ=255)
                                                            gATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCt                              <  1:2035187/93‑1 (MQ=255)
                                                              ttgttgTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGa                            <  1:5930972/93‑1 (MQ=255)
                                                               tgttgtgttgTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGaa                           <  2:7089468/93‑1 (MQ=255)
                                                               tgttgtgttgTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGaa                           <  2:1418276/93‑1 (MQ=255)
                                                                gttgtgttgtTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAt                          >  2:7560691/1‑93 (MQ=255)
                                                                 ttgtgttgtTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATc                         >  1:3427272/1‑93 (MQ=255)
                                                                    tgttgtTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGc                      <  1:722626/93‑1 (MQ=255)
                                                                      ttgttgCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTc                    <  1:8699487/93‑1 (MQ=255)
                                                                          tgCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCt                <  1:6070617/93‑1 (MQ=255)
                                                                           gCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCtt               >  2:9431223/1‑93 (MQ=255)
                                                                            ccATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCttt              >  2:3549042/1‑93 (MQ=255)
                                                                              ctGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            <  2:8608225/92‑1 (MQ=255)
                                                                              aTGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            >  2:2688240/1‑93 (MQ=255)
                                                                              aTGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            <  2:1811376/93‑1 (MQ=255)
                                                                               ttgTATTCTCCGTACCCTTTTAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAt           >  1:8925014/3‑93 (MQ=255)
                                                                               tGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAt           <  1:8282680/93‑1 (MQ=255)
                                                                               tGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAt           >  2:2584613/1‑93 (MQ=255)
                                                                                ggTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATg          >  1:3978012/1‑93 (MQ=255)
                                                                                 gTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGc         >  2:3317349/1‑93 (MQ=255)
                                                                                 gTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGc         >  1:6796254/1‑93 (MQ=255)
                                                                                 gTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGc         >  1:5003760/1‑93 (MQ=255)
                                                                                  tATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCa        >  1:4132291/1‑93 (MQ=255)
                                                                                  tATGCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCa        <  2:7414663/93‑1 (MQ=255)
                                                                                    ttCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGt      >  2:5988009/1‑93 (MQ=255)
                                                                                     tctcCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTc     >  1:7320784/1‑93 (MQ=255)
                                                                                     tctcCGTACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTc     <  1:3891839/93‑1 (MQ=255)
                                                                                             |                                                                                       
GCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTG  >  NC_000913/4013679‑4013857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 338 total aligned reads displayed.
CGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  NC_000913/4013680‑4013865
                                                                                                |                                                                                              
CGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑C‑C‑C                                                                                                >  SRR4302540.2827047/1‑94 (MQ=60)
 GTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑C‑C‑C                                                                                              >  SRR4302540.3973035/1‑94 (MQ=60)
 GTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑C‑C‑C                                                                                              >  SRR4302540.2237770/1‑94 (MQ=60)
   CGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑C‑Cctt                                                                                             >  SRR4302540.5861198/1‑91 (MQ=60)
   CGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑C‑Cctt                                                                                             <  SRR4302540.3083974/94‑4 (MQ=60)
    GTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCCAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTA                                                                                            >  SRR4302540.8567771/1‑94 (MQ=60)
    GTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTA                                                                                            >  SRR4302540.7966836/1‑94 (MQ=60)
     TCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTAT                                                                                           >  SRR4302540.4253895/1‑94 (MQ=60)
     TCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTAT                                                                                           >  SRR4302540.7322309/1‑94 (MQ=60)
     TCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTAT                                                                                           <  SRR4302540.6930591/94‑1 (MQ=60)
     TCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTAT                                                                                           <  SRR4302540.9434973/94‑1 (MQ=60)
     TCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑C‑CGTTAT                                                                                           <  SRR4302540.5932491/94‑1 (MQ=60)
       CGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAA                                                                                         >  SRR4302540.172561/1‑94 (MQ=60)
        GGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAA                                                                                        <  SRR4302540.1681865/94‑1 (MQ=60)
        GGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAA                                                                                        <  SRR4302540.5258118/94‑1 (MQ=60)
         GGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAA                                                                                       >  SRR4302540.7645366/1‑94 (MQ=60)
         GGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAA                                                                                       <  SRR4302540.6770953/94‑1 (MQ=60)
         GGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAA                                                                                       <  SRR4302540.8050942/94‑1 (MQ=60)
         GGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAA                                                                                       <  SRR4302540.8480017/94‑1 (MQ=60)
          GGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAA                                                                                      >  SRR4302540.7442028/1‑94 (MQ=60)
          GGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAA                                                                                      >  SRR4302540.362974/1‑94 (MQ=60)
           GTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAAT                                                                                     <  SRR4302540.781915/94‑1 (MQ=60)
           GTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAAT                                                                                     <  SRR4302540.3779070/94‑1 (MQ=60)
           GTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAAT                                                                                     <  SRR4302540.4665074/94‑1 (MQ=60)
            TCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATT                                                                                    >  SRR4302540.7217148/1‑94 (MQ=60)
            TCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATG                                                                                    >  SRR4302540.7164389/1‑94 (MQ=60)
             CTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGT                                                                                   >  SRR4302540.9003963/1‑94 (MQ=60)
             CTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGT                                                                                   >  SRR4302540.7719667/1‑94 (MQ=60)
             CTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑CGC‑TTATAAAAATGT                                                                                   >  SRR4302540.5687366/1‑94 (MQ=60)
              TGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTT                                                                                  >  SRR4302540.1101508/1‑94 (MQ=60)
               GAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTG                                                                                 >  SRR4302540.6585532/1‑94 (MQ=60)
               GAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTG                                                                                 >  SRR4302540.6525753/1‑94 (MQ=60)
                 ACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCG                                                                               <  SRR4302540.506816/94‑1 (MQ=60)
                 ACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCG                                                                               >  SRR4302540.5911988/1‑94 (MQ=60)
                  CGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATNTTGCGC                                                                              >  SRR4302540.1631145/1‑94 (MQ=60)
                  CGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGC                                                                              >  SRR4302540.9706209/1‑94 (MQ=60)
                   GATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTTCCTTGGTATTCTCCGTCC‑C‑C‑TTATAAAAATGTTGCGCA                                                                             >  SRR4302540.9233193/1‑94 (MQ=60)
                   GATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCA                                                                             >  SRR4302540.7074555/1‑94 (MQ=60)
                   GATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCA                                                                             >  SRR4302540.3162190/1‑94 (MQ=60)
                   GATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCA                                                                             <  SRR4302540.10115075/94‑1 (MQ=60)
                    ATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAA                                                                            <  SRR4302540.10147439/94‑1 (MQ=60)
                      GGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTCC‑C‑C‑TTATAAAAATGTTGCGCAATG                                                                          <  SRR4302540.273369/94‑1 (MQ=60)
                      GGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATG                                                                          >  SRR4302540.3351606/1‑94 (MQ=60)
                      GGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATG                                                                          <  SRR4302540.5505583/94‑1 (MQ=60)
                      GGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATG                                                                          <  SRR4302540.4140226/94‑1 (MQ=60)
                       GTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGT                                                                         >  SRR4302540.7004169/1‑94 (MQ=60)
                         CGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTA                                                                       <  SRR4302540.1886131/94‑1 (MQ=60)
                         CGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTA                                                                       <  SRR4302540.21155/94‑1 (MQ=60)
                         CGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTA                                                                       >  SRR4302540.2149472/1‑94 (MQ=60)
                          GAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAA                                                                      <  SRR4302540.4818505/94‑1 (MQ=60)
                          GAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAA                                                                      <  SRR4302540.6282335/94‑1 (MQ=60)
                           AAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAct                                                                     >  SRR4302540.3680596/1‑92 (MQ=60)
                           AAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAAC                                                                     <  SRR4302540.9351013/94‑1 (MQ=60)
                           AAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAAC                                                                     >  SRR4302540.6411706/1‑94 (MQ=60)
                           AAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAAC                                                                     >  SRR4302540.7541522/1‑94 (MQ=60)
                            AGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACT                                                                    <  SRR4302540.9728590/94‑1 (MQ=60)
                              CGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTAT                                                                  <  SRR4302540.1775795/94‑1 (MQ=60)
                               GAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATA                                                                 >  SRR4302540.5242935/1‑94 (MQ=60)
                               GAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATA                                                                 >  SRR4302540.4036153/1‑94 (MQ=60)
                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATCAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302540.1754384/1‑94 (MQ=60)
                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302540.9498131/1‑94 (MQ=60)
                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAG                                                                <  SRR4302540.4769488/94‑1 (MQ=60)
                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302540.8332469/1‑94 (MQ=60)
                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302540.8332470/1‑94 (MQ=60)
                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302540.2462989/1‑94 (MQ=60)
                                 GAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGT                                                               <  SRR4302540.5037915/94‑1 (MQ=60)
                                  AGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTCC‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTC                                                              <  SRR4302540.6703023/94‑1 (MQ=60)
                                  AGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTC                                                              <  SRR4302540.8852236/94‑1 (MQ=60)
                                  AGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTC                                                              <  SRR4302540.8852237/94‑1 (MQ=60)
                                  AGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTC                                                              >  SRR4302540.2602298/1‑94 (MQ=60)
                                   GGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCA                                                             <  SRR4302540.1991927/94‑1 (MQ=60)
                                   GGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCA                                                             <  SRR4302540.9565512/94‑1 (MQ=60)
                                   GGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCA                                                             <  SRR4302540.600768/94‑1 (MQ=60)
                                   GGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCA                                                             <  SRR4302540.9692429/94‑1 (MQ=60)
                                    gcgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAG                                                            <  SRR4302540.3519416/91‑1 (MQ=60)
                                    gcgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAG                                                            <  SRR4302540.1400447/91‑1 (MQ=60)
                                     cgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGC                                                           >  SRR4302540.6542859/3‑94 (MQ=60)
                                     cgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGC                                                           >  SRR4302540.1452632/3‑94 (MQ=60)
                                     cgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGC                                                           >  SRR4302540.2817108/3‑94 (MQ=60)
                                     G‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCA                                                          >  SRR4302540.7024765/1‑94 (MQ=60)
                                     G‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCA                                                          >  SRR4302540.3935514/1‑94 (MQ=60)
                                       ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCAT                                                         <  SRR4302540.1567490/94‑1 (MQ=60)
                                       ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCAT                                                         <  SRR4302540.1298323/94‑1 (MQ=60)
                                        TGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATG                                                        >  SRR4302540.3906876/1‑94 (MQ=60)
                                         GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGC                                                       >  SRR4302540.1030289/1‑94 (MQ=60)
                                         GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGC                                                       >  SRR4302540.1469555/1‑94 (MQ=60)
                                          CAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCA                                                      >  SRR4302540.6330533/1‑94 (MQ=60)
                                          CAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCA                                                      >  SRR4302540.6581936/1‑94 (MQ=60)
                                           AGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAA                                                     >  SRR4302540.6491517/1‑94 (MQ=60)
                                           AGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAA                                                     >  SRR4302540.7098739/1‑94 (MQ=60)
                                             GAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACA                                                   <  SRR4302540.7999029/94‑1 (MQ=60)
                                             CAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACA                                                   <  SRR4302540.6496906/94‑1 (MQ=60)
                                             CAGGTGCAAATCCAGATTGTTGGTTTGTTGCCATGGGATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACA                                                   >  SRR4302540.1796763/1‑94 (MQ=60)
                                              AGGTTCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAA                                                  <  SRR4302540.9885613/94‑1 (MQ=60)
                                              AGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAA                                                  >  SRR4302540.536859/1‑94 (MQ=60)
                                              AGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAA                                                  >  SRR4302540.8295903/1‑94 (MQ=60)
                                              AGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGAATGCATCAA                                                  >  SRR4302540.2116544/1‑94 (MQ=60)
                                              AGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGATGCGCAATGTTAACTATAGTCAGCATGCAACAA                                                  >  SRR4302540.9795629/1‑94 (MQ=60)
                                               GGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAA                                                 >  SRR4302540.1516425/1‑94 (MQ=60)
                                               GGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAA                                                 >  SRR4302540.6507573/1‑94 (MQ=60)
                                               GGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAA                                                 >  SRR4302540.2029813/1‑94 (MQ=60)
                                               GGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAA                                                 >  SRR4302540.7478134/1‑94 (MQ=60)
                                               GGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAA                                                 >  SRR4302540.6116923/1‑94 (MQ=60)
                                               GGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAA                                                 >  SRR4302540.2238755/1‑94 (MQ=60)
                                               GGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAA                                                 >  SRR4302540.2713450/1‑94 (MQ=60)
                                                GTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAAT                                                >  SRR4302540.1348564/1‑94 (MQ=60)
                                                 TGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATC                                               <  SRR4302540.1619683/94‑1 (MQ=60)
                                                 TGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATC                                               >  SRR4302540.9070087/1‑94 (MQ=60)
                                                  GCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCA                                              >  SRR4302540.215390/1‑94 (MQ=60)
                                                  GCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCA                                              >  SRR4302540.215389/1‑94 (MQ=60)
                                                  GCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCA                                              <  SRR4302540.9478855/94‑1 (MQ=60)
                                                  GCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCA                                              >  SRR4302540.9193430/1‑94 (MQ=60)
                                                   CAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCAC                                             <  SRR4302540.9736488/94‑1 (MQ=60)
                                                    AAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACA                                            >  SRR4302540.5315109/1‑94 (MQ=60)
                                                    AAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACA                                            <  SRR4302540.3838845/94‑1 (MQ=60)
                                                    AAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACA                                            >  SRR4302540.554482/1‑94 (MQ=60)
                                                    AAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTAT‑AAAATTCTGCGCAATGGTAACTATAGTCAGCATGCAACAAATCACAT                                           >  SRR4302540.7884390/1‑94 (MQ=60)
                                                     AATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAT                                           <  SRR4302540.2631461/94‑1 (MQ=60)
                                                     AATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAT                                           <  SRR4302540.3871028/94‑1 (MQ=60)
                                                      ATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATT                                          >  SRR4302540.8131304/1‑94 (MQ=60)
                                                      ATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATT                                          <  SRR4302540.3719204/94‑1 (MQ=60)
                                                       TCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTG                                         <  SRR4302540.4471459/94‑1 (MQ=60)
                                                       ACCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTG                                         <  SRR4302540.3958688/94‑1 (MQ=60)
                                                         CAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCC                                       >  SRR4302540.2964783/1‑94 (MQ=60)
                                                          AGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCT                                      <  SRR4302540.6337009/94‑1 (MQ=60)
                                                          AGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCT                                      >  SRR4302540.1397618/1‑94 (MQ=60)
                                                          AGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCT                                      >  SRR4302540.9366910/1‑94 (MQ=60)
                                                          AGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCT                                      >  SRR4302540.8826458/1‑94 (MQ=60)
                                                          AGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCG                                      >  SRR4302540.1342374/1‑94 (MQ=60)
                                                           GATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTG                                     <  SRR4302540.9255851/94‑1 (MQ=60)
                                                           GATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTG                                     >  SRR4302540.8070950/1‑94 (MQ=60)
                                                           GATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTG                                     <  SRR4302540.5855678/94‑1 (MQ=60)
                                                           GATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTG                                     <  SRR4302540.2057135/94‑1 (MQ=60)
                                                            ATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGA                                    >  SRR4302540.4279030/1‑94 (MQ=60)
                                                            ATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGA                                    <  SRR4302540.8512142/94‑1 (MQ=60)
                                                             TTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAA                                   <  SRR4302540.5996511/94‑1 (MQ=60)
                                                              TGTTGTGTTGTTGCCATTGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  <  SRR4302540.6648707/94‑1 (MQ=60)
                                                              TGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  >  SRR4302540.7606464/1‑94 (MQ=60)
                                                              TGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  <  SRR4302540.5098988/94‑1 (MQ=60)
                                                              TGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  >  SRR4302540.2567252/1‑94 (MQ=60)
                                                              TGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  >  SRR4302540.5026431/1‑94 (MQ=60)
                                                              TGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  >  SRR4302540.2930689/1‑94 (MQ=60)
                                                               TTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATC                                 <  SRR4302540.7796410/94‑1 (MQ=60)
                                                               GTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATC                                 <  SRR4302540.3426848/94‑1 (MQ=60)
                                                               GTTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATC                                 >  SRR4302540.3464519/1‑94 (MQ=60)
                                                                TTGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCG                                >  SRR4302540.4622435/1‑94 (MQ=60)
                                                                 TGTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGG                               <  SRR4302540.9323689/94‑1 (MQ=60)
                                                                  GTGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATGAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTACCTGAATCGGC                              <  SRR4302540.9057489/94‑1 (MQ=60)
                                                                  GTGTTGTTGCCATGGTAATCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGC                              <  SRR4302540.9057490/94‑1 (MQ=60)
                                                                   TGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCT                             <  SRR4302540.730371/94‑1 (MQ=60)
                                                                   TGTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCT                             <  SRR4302540.1195935/94‑1 (MQ=60)
                                                                    GTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTC                            >  SRR4302540.8784670/1‑94 (MQ=60)
                                                                    GTTGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTC                            >  SRR4302540.5596912/1‑94 (MQ=60)
                                                                      TGTTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCAT                          <  SRR4302540.816146/94‑1 (MQ=60)
                                                                        TTGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCT                        <  SRR4302540.6988525/94‑1 (MQ=60)
                                                                         TGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTT                       <  SRR4302540.6138106/94‑1 (MQ=60)
                                                                         TGCCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTT                       >  SRR4302540.6384830/1‑94 (MQ=60)
                                                                           CCATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTT                     >  SRR4302540.6021337/1‑94 (MQ=60)
                                                                             ATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   <  SRR4302540.34649/94‑1 (MQ=60)
                                                                             ATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   >  SRR4302540.7834553/1‑94 (MQ=60)
                                                                             ATGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   <  SRR4302540.2712488/94‑1 (MQ=60)
                                                                              TGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATG                  <  SRR4302540.5940101/94‑1 (MQ=60)
                                                                              TGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATG                  >  SRR4302540.8771605/1‑94 (MQ=60)
                                                                              TGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATG                  <  SRR4302540.8378877/94‑1 (MQ=60)
                                                                              TGGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATG                  >  SRR4302540.4020865/1‑94 (MQ=60)
                                                                               GGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGC                 >  SRR4302540.6871424/1‑94 (MQ=60)
                                                                               GGTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGC                 >  SRR4302540.5057954/1‑94 (MQ=60)
                                                                                GTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCA                >  SRR4302540.4176985/1‑94 (MQ=60)
                                                                                GTATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCA                >  SRR4302540.6152048/1‑94 (MQ=60)
                                                                                 TATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAG               >  SRR4302540.653383/1‑94 (MQ=60)
                                                                                 TATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAG               >  SRR4302540.7370475/1‑94 (MQ=60)
                                                                                  ATTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGT              >  SRR4302540.1231180/1‑94 (MQ=60)
                                                                                   TTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTC             <  SRR4302540.7217055/94‑1 (MQ=60)
                                                                                   TTCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTC             >  SRR4302540.7402548/1‑94 (MQ=60)
                                                                                    TCTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCC            <  SRR4302540.3934091/94‑1 (MQ=60)
                                                                                     CTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302540.7986997/94‑1 (MQ=60)
                                                                                     CTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302540.2092806/94‑1 (MQ=60)
                                                                                     CTCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           >  SRR4302540.7347919/1‑94 (MQ=60)
                                                                                      TCCGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTG          <  SRR4302540.368266/94‑1 (MQ=60)
                                                                                       cccgtacC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTG          <  SRR4302540.5339833/87‑1 (MQ=60)
                                                                                        CGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCA        <  SRR4302540.2745132/94‑1 (MQ=60)
                                                                                        CGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCA        <  SRR4302540.2291297/94‑1 (MQ=60)
                                                                                        CGT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCA        >  SRR4302540.7611842/1‑94 (MQ=60)
                                                                                         GT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAG       >  SRR4302540.357742/1‑94 (MQ=60)
                                                                                         GT‑ACC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAG       >  SRR4302540.8610155/1‑94 (MQ=60)
                                                                                          ctacC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAG       <  SRR4302540.3125223/90‑1 (MQ=60)
                                                                                          T‑C‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAA     <  SRR4302540.7460512/94‑1 (MQ=60)
                                                                                           tacC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGA      >  SRR4302540.9844302/4‑94 (MQ=60)
                                                                                            acC‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAA     <  SRR4302540.1605879/92‑1 (MQ=60)
                                                                                            C‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCACCAAATCGCATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    <  SRR4302540.5604591/94‑1 (MQ=60)
                                                                                            C‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    >  SRR4302540.3235022/1‑94 (MQ=60)
                                                                                            C‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    >  SRR4302540.10129105/1‑94 (MQ=60)
                                                                                            C‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    <  SRR4302540.3130782/94‑1 (MQ=60)
                                                                                            C‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    >  SRR4302540.853907/1‑94 (MQ=60)
                                                                                            C‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    >  SRR4302540.853906/1‑94 (MQ=60)
                                                                                            C‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    <  SRR4302540.8415026/94‑1 (MQ=60)
                                                                                              C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATG   >  SRR4302540.2755609/1‑94 (MQ=60)
                                                                                              C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATG   >  SRR4302540.8078792/1‑94 (MQ=60)
                                                                                                C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  SRR4302540.3360206/1‑94 (MQ=60)
                                                                                                C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  <  SRR4302540.7452887/94‑1 (MQ=60)
                                                                                                |                                                                                              
CGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑C‑C‑TTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  NC_000913/4013680‑4013865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑