Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,016,743	C→T	P101L (CCC→CTC)	ubiE →	UbiE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,016,743	0	C	T	100.0%	1759.2 / NA	476	P101L (CCC→CTC)	ubiE	UbiE
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (213/263); total (213/263)

Only 100 of 484 total aligned reads displayed.

CTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCCCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGG  >  NC_000913/4016653‑4016832

 tggtggCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCaa                                                                                        <  2:6502863/93‑1 (MQ=255)

  ggtggCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCaaa                                                                                       >  2:2649834/1‑93 (MQ=255)

   gtggCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCaaaa                                                                                      >  2:4458730/1‑93 (MQ=255)

   gtggCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCaaaa                                                                                      <  1:8857362/93‑1 (MQ=255)

    tggCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAAt                                                                                     <  1:2674538/93‑1 (MQ=255)

       cACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATggg                                                                                  <  1:5394408/93‑1 (MQ=255)

        aCCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGc                                                                                 <  2:2439816/93‑1 (MQ=255)

         ccGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGcc                                                                                >  2:9187430/1‑93 (MQ=255)

         ccGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGcc                                                                                >  2:2568107/1‑93 (MQ=255)

         ccGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGcc                                                                                >  2:4033708/1‑93 (MQ=255)

           ggCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCcgc                                                                              >  2:804534/1‑93 (MQ=255)

            gCGACCTGACAGCGAAATGCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCcgcg                                                                             <  1:2097913/93‑1 (MQ=255)

               aCCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCgaga                                                                          <  1:6553427/93‑1 (MQ=255)

               aCCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCgaga                                                                          <  2:1309876/93‑1 (MQ=255)

               aCCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCgaga                                                                          >  2:8330866/1‑93 (MQ=255)

                 cTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGGATACATGCTCAAAATGGGCCGCGAGAAg                                                                        >  2:1778242/1‑93 (MQ=255)

                 cTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAg                                                                        >  1:4886644/1‑93 (MQ=255)

                 cTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAg                                                                        >  1:10015767/1‑93 (MQ=255)

                  tGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGc                                                                       >  2:6987727/1‑93 (MQ=255)

                  tGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGc                                                                       >  2:4641611/1‑93 (MQ=255)

                     cAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGTCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGc                                                                    <  1:9671063/93‑1 (MQ=255)

                      aGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCg                                                                   <  1:1643596/93‑1 (MQ=255)

                       gCGAAATACTCCCGCGTGGTCAGAGACCCTGGCAAAGTGGACCTTGCTCATATCAATGAATCCATGCTAAAAATGGGCCCCGAGAAGCTTCGt                                                                  <  2:4823491/93‑1 (MQ=255)

                         gAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTaa                                                                <  2:3151000/93‑1 (MQ=255)

                         gAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTaa                                                                >  1:5561406/1‑93 (MQ=255)

                         gAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTaa                                                                >  1:9896251/1‑93 (MQ=255)

                          aaaTTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAAGGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAat                                                               >  1:1320523/1‑93 (MQ=255)

                           aaTTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAata                                                              <  1:4537269/93‑1 (MQ=255)

                            aTTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAatat                                                             <  2:2201488/93‑1 (MQ=255)

                            aTTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAatat                                                             >  1:2530406/1‑93 (MQ=255)

                             ttCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATc                                                            <  2:2070907/93‑1 (MQ=255)

                              tctcCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCg                                                           <  2:7666457/93‑1 (MQ=255)

                                tcCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGgt                                                         >  2:620156/1‑93 (MQ=255)

                                  ccGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGgtgt                                                       >  1:7595627/1‑93 (MQ=255)

                                  ccGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGgtgg                                                       >  1:404925/1‑92 (MQ=255)

                                   cGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGtgtg                                                      <  2:5679849/93‑1 (MQ=255)

                                    gCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGa                                                     <  1:6428272/93‑1 (MQ=255)

                                    gCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGa                                                     >  2:2896615/1‑93 (MQ=255)

                                       tGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTg                                                  >  2:6843557/1‑93 (MQ=255)

                                         gTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGc                                                >  2:3318699/1‑93 (MQ=255)

                                          tCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCa                                               >  2:9725024/1‑93 (MQ=255)

                                           cGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCaa                                              <  2:2831651/93‑1 (MQ=255)

                                            ggAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAAc                                             >  1:8414813/1‑93 (MQ=255)

                                            ggAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAAc                                             <  2:3039267/93‑1 (MQ=255)

                                              agaAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGt                                           <  1:4703040/93‑1 (MQ=255)

                                              agaAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGt                                           >  1:3532903/1‑93 (MQ=255)

                                                aaaCTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTg                                         <  2:42033/93‑1 (MQ=255)

                                                aaaCTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTg                                         >  2:1577720/1‑93 (MQ=255)

                                                 aaCTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGa                                        >  2:6345866/1‑93 (MQ=255)

                                                  aCTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAg                                       >  1:7347597/1‑93 (MQ=255)

                                                  aCTGGCAAAGTGCTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAg                                       <  1:4839846/93‑1 (MQ=255)

                                                   cTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGt                                      <  2:5614397/93‑1 (MQ=255)

                                                    tGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTa                                     <  2:9837933/93‑1 (MQ=255)

                                                    tGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTa                                     >  2:5165861/1‑93 (MQ=255)

                                                    tGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTa                                     <  1:7848069/93‑1 (MQ=255)

                                                    tGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTa                                     <  1:1880029/93‑1 (MQ=255)

                                                      gCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATg                                   <  1:6465683/93‑1 (MQ=255)

                                                       cAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGt                                  <  2:3743480/93‑1 (MQ=255)

                                                       aaaaGTGGTCCTTGCTGATATCAATGAATCGATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGt                                  <  2:7304817/92‑1 (MQ=255)

                                                         aaGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTc                                >  1:307406/1‑93 (MQ=255)

                                                          aGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAATCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCa                               <  1:8009382/93‑1 (MQ=255)

                                                            tGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAgg                             <  2:5071322/93‑1 (MQ=255)

                                                             ggTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGc                            <  1:4283174/93‑1 (MQ=255)

                                                             ggTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGc                            <  1:3811214/93‑1 (MQ=255)

                                                             ggTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGc                            <  2:5503530/93‑1 (MQ=255)

                                                             ggTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGc                            >  2:6699808/1‑93 (MQ=255)

                                                             ggTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGc                            >  2:3485990/1‑93 (MQ=255)

                                                             ggTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGc                            <  2:8657010/93‑1 (MQ=255)

                                                              gTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCg                           <  1:4478090/93‑1 (MQ=255)

                                                               tCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGa                          >  1:8132297/1‑93 (MQ=255)

                                                               tCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGa                          >  1:5184950/1‑93 (MQ=255)

                                                                tcTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGaa                         <  1:8562504/92‑1 (MQ=255)

                                                                ccTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGaa                         <  2:5242497/93‑1 (MQ=255)

                                                                ccTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGaa                         <  2:53308/93‑1 (MQ=255)

                                                                ccTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGaa                         <  2:6046428/93‑1 (MQ=255)

                                                                 cTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAAc                        <  2:9529219/93‑1 (MQ=255)

                                                                  ttGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACg                       >  1:6619032/1‑93 (MQ=255)

                                                                   tGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGc                      <  2:854347/93‑1 (MQ=255)

                                                                    gCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCt                     >  1:3265123/1‑93 (MQ=255)

                                                                      tGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGa                   <  1:9076981/93‑1 (MQ=255)

                                                                      tGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGa                   >  1:5618677/1‑93 (MQ=255)

                                                                       gATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAg                  >  1:1197977/1‑93 (MQ=255)

                                                                       gATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAg                  <  1:5971075/93‑1 (MQ=255)

                                                                       gATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAg                  >  2:1053780/1‑93 (MQ=255)

                                                                        atatCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAgg                 <  1:707129/93‑1 (MQ=255)

                                                                        atatCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAgg                 <  2:8123815/93‑1 (MQ=255)

                                                                           tCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGgcgc              <  2:3850846/93‑1 (MQ=255)

                                                                           tCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGgcgc              >  1:1492411/1‑93 (MQ=255)

                                                                           tCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGgcgc              >  2:7745778/1‑93 (MQ=255)

                                                                           tCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGgcgc              >  1:6083283/1‑93 (MQ=255)

                                                                            cAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCt             <  2:9787159/93‑1 (MQ=255)

                                                                              aTGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGc           <  2:5804106/93‑1 (MQ=255)

                                                                              aTGAATCCATGCGCAAAATGGGCCGTGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGc           <  1:9273690/93‑1 (MQ=255)

                                                                               tGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGcc          >  1:6248155/1‑93 (MQ=255)

                                                                                  aTCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGtt       >  1:1443181/1‑93 (MQ=255)

                                                                                    ccATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTcc     >  1:2888778/1‑93 (MQ=255)

                                                                                    ccATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTcc     >  1:9446440/1‑93 (MQ=255)

                                                                                       tGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCgg  <  1:233882/93‑1 (MQ=255)

                                                                                       tGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCgg  >  2:8904381/1‑93 (MQ=255)

                                                                                       tGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCgg  >  2:1125976/1‑93 (MQ=255)

CTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCCCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGG  >  NC_000913/4016653‑4016832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 245 total aligned reads displayed.

TGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCCCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATAA  >  NC_000913/4016650‑4016836

TGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCT                                                                                               <  SRR4302540.374735/94‑1 (MQ=60)

 GGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTC                                                                                              <  SRR4302540.5879651/94‑1 (MQ=60)

   ccggtgaccccgtggtcgTGACAGCAAAATTCTCCCGTCTGGTCGGAAAAACGGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAA                                                                                            <  SRR4302540.10163973/76‑1 (MQ=60)

    TGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAA                                                                                           >  SRR4302540.8219606/1‑94 (MQ=60)

    TGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAA                                                                                           >  SRR4302540.3897892/1‑94 (MQ=60)

    TGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAA                                                                                           >  SRR4302540.8219607/1‑94 (MQ=60)

    TGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAA                                                                                           >  SRR4302540.8403845/1‑94 (MQ=60)

    TGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAA                                                                                           >  SRR4302540.8749338/1‑94 (MQ=60)

      GTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAAT                                                                                         >  SRR4302540.5853097/1‑94 (MQ=60)

      GTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAAT                                                                                         <  SRR4302540.8959849/94‑1 (MQ=60)

      GTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGCGGTCCTTGCTGATATCAATGAATCCATGCTCAAAAT                                                                                         >  SRR4302540.907401/1‑94 (MQ=60)

       TGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATG                                                                                        <  SRR4302540.2703492/94‑1 (MQ=60)

        GGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGG                                                                                       >  SRR4302540.1231874/1‑94 (MQ=60)

         gcagcagcagccgaacaacgagattctcccggcgtGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGG                                                                                      <  SRR4302540.7710883/59‑1 (MQ=60)

         GCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGG                                                                                      <  SRR4302540.2131064/94‑1 (MQ=60)

         GCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGG                                                                                      <  SRR4302540.4557160/94‑1 (MQ=60)

          CACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGC                                                                                     <  SRR4302540.489501/94‑1 (MQ=60)

          CACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGC                                                                                     <  SRR4302540.9223734/94‑1 (MQ=60)

          CACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGC                                                                                     <  SRR4302540.6516665/94‑1 (MQ=60)

           CCCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCC                                                                                    <  SRR4302540.6537341/94‑1 (MQ=60)

           ACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCC                                                                                    >  SRR4302540.8472045/1‑94 (MQ=60)

            CCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTTAAAATGGGCCG                                                                                   <  SRR4302540.5351768/94‑1 (MQ=60)

            CCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCG                                                                                   <  SRR4302540.8788686/94‑1 (MQ=60)

            CCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCG                                                                                   <  SRR4302540.7922302/94‑1 (MQ=60)

            CCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCG                                                                                   >  SRR4302540.2884536/1‑94 (MQ=60)

              GGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCG                                                                                 >  SRR4302540.2688974/1‑94 (MQ=60)

                CGACCGGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAG                                                                               <  SRR4302540.4862974/94‑1 (MQ=60)

                 GACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGA                                                                              >  SRR4302540.3672306/1‑94 (MQ=60)

                 GACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGA                                                                              >  SRR4302540.2482959/1‑94 (MQ=60)

                 GACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGA                                                                              >  SRR4302540.6874063/1‑94 (MQ=60)

                 GACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGA                                                                              <  SRR4302540.5030823/94‑1 (MQ=60)

                  ccttaccaggaaaattcccccgctgggtggaagcaactgcaAAAGTGGT‑CTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAG                                                                            <  SRR4302540.6101040/53‑1 (MQ=60)

                  ACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAA                                                                             <  SRR4302540.6626106/94‑1 (MQ=60)

                   CCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAG                                                                            <  SRR4302540.2409070/94‑1 (MQ=60)

                   CCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAG                                                                            >  SRR4302540.4939150/1‑94 (MQ=60)

                   CCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAG                                                                            >  SRR4302540.10132356/1‑94 (MQ=60)

                    CTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGC                                                                           >  SRR4302540.6111322/1‑94 (MQ=60)

                    CTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGC                                                                           >  SRR4302540.6961360/1‑94 (MQ=60)

                    CTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGC                                                                           >  SRR4302540.9458196/1‑94 (MQ=60)

                    CTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGC                                                                           >  SRR4302540.1377836/1‑94 (MQ=60)

                    CTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGC                                                                           >  SRR4302540.8398588/1‑94 (MQ=60)

                      GACAGCTAAATACTCCCGCCTGGTGGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTG                                                                         <  SRR4302540.5647898/94‑1 (MQ=60)

                      GACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTG                                                                         <  SRR4302540.9168552/94‑1 (MQ=60)

                        CAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGTCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCG                                                                       <  SRR4302540.9784874/94‑1 (MQ=60)

                         AGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGCAGCTGCGT                                                                      >  SRR4302540.5282130/1‑94 (MQ=60)

                         AGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGT                                                                      <  SRR4302540.6607767/94‑1 (MQ=60)

                         AGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGT                                                                      <  SRR4302540.8606025/94‑1 (MQ=60)

                         AGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGT                                                                      <  SRR4302540.1661551/94‑1 (MQ=60)

                         AGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGT                                                                      <  SRR4302540.1661896/94‑1 (MQ=60)

                          GCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTA                                                                     <  SRR4302540.7888649/94‑1 (MQ=60)

                           CGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAA                                                                    >  SRR4302540.5622650/1‑94 (MQ=60)

                           CGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAA                                                                    >  SRR4302540.10011823/1‑94 (MQ=60)

                            GAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAAT                                                                   >  SRR4302540.1334274/1‑94 (MQ=60)

                            GAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAAGGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAAT                                                                   >  SRR4302540.1334275/1‑94 (MQ=60)

                             AAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATA                                                                  >  SRR4302540.1951679/1‑94 (MQ=60)

                              AATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATAT                                                                 <  SRR4302540.4618439/94‑1 (MQ=60)

                              AATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATAT                                                                 <  SRR4302540.4586377/94‑1 (MQ=60)

                              AATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATAT                                                                 >  SRR4302540.9956846/1‑94 (MQ=60)

                              AATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATAT                                                                 <  SRR4302540.2565158/94‑1 (MQ=60)

                              AATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATAT                                                                 >  SRR4302540.2975614/1‑94 (MQ=60)

                               ATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATT                                                                >  SRR4302540.8638084/1‑94 (MQ=60)

                               ATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATC                                                                <  SRR4302540.3658939/94‑1 (MQ=60)

                               ATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATC                                                                <  SRR4302540.6401812/94‑1 (MQ=60)

                               ATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATC                                                                <  SRR4302540.7911537/94‑1 (MQ=60)

                               ATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATC                                                                >  SRR4302540.4464643/1‑94 (MQ=60)

                               ATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATC                                                                <  SRR4302540.4429603/94‑1 (MQ=60)

                                TTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCG                                                               <  SRR4302540.6244076/94‑1 (MQ=60)

                                TTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCG                                                               <  SRR4302540.8204776/94‑1 (MQ=60)

                                TTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCG                                                               <  SRR4302540.6522429/94‑1 (MQ=60)

                                ATCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCG                                                               <  SRR4302540.6049004/94‑1 (MQ=60)

                                 TCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGG                                                              <  SRR4302540.2850812/94‑1 (MQ=60)

                                    CCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGT                                                           >  SRR4302540.7680959/1‑94 (MQ=60)

                                    CCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGG                                                           >  SRR4302540.409158/1‑94 (MQ=60)

                                     CCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTG                                                          <  SRR4302540.5078613/94‑1 (MQ=60)

                                      CGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGA                                                         >  SRR4302540.1637446/1‑94 (MQ=60)

                                      CGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGA                                                         >  SRR4302540.5996145/1‑94 (MQ=60)

                                       GCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGAT                                                        >  SRR4302540.617881/1‑94 (MQ=60)

                                       GCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGAT                                                        <  SRR4302540.6499819/94‑1 (MQ=60)

                                        CCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATT                                                       >  SRR4302540.4325322/1‑94 (MQ=60)

                                         CTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTG                                                      <  SRR4302540.4582244/94‑1 (MQ=60)

                                          TGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGG                                                     <  SRR4302540.7313384/94‑1 (MQ=60)

                                          TGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGG                                                     >  SRR4302540.20676/1‑94 (MQ=60)

                                           GGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGC                                                    >  SRR4302540.4259778/1‑94 (MQ=60)

                                            GTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCA                                                   <  SRR4302540.1466264/94‑1 (MQ=60)

                                            GTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCA                                                   <  SRR4302540.4285123/94‑1 (MQ=60)

                                             GCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAA                                                  <  SRR4302540.8013174/94‑1 (MQ=60)

                                              CGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAAC                                                 >  SRR4302540.9430088/1‑94 (MQ=60)

                                              CGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAAC                                                 >  SRR4302540.8512484/1‑94 (MQ=60)

                                               GGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACG                                                <  SRR4302540.970024/94‑1 (MQ=60)

                                                GAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGT                                               >  SRR4302540.3571469/1‑94 (MQ=60)

                                                GAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGT                                               <  SRR4302540.8178012/94‑1 (MQ=60)

                                                GAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGT                                               >  SRR4302540.1224159/1‑94 (MQ=60)

                                                 AGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTT                                              <  SRR4302540.4753301/94‑1 (MQ=60)

                                                 AGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTT                                              >  SRR4302540.7978493/1‑94 (MQ=60)

                                                  GAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTG                                             >  SRR4302540.1696687/1‑94 (MQ=60)

                                                   AAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGA                                            >  SRR4302540.462336/1‑94 (MQ=60)

                                                    AACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAG                                           >  SRR4302540.7429573/1‑94 (MQ=60)

                                                     ACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGT                                          <  SRR4302540.3477249/94‑1 (MQ=60)

                                                     ACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGT                                          <  SRR4302540.4891688/94‑1 (MQ=60)

                                                     ACTGGCAAAGTGCTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGT                                          <  SRR4302540.4891687/94‑1 (MQ=60)

                                                      CTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTA                                         >  SRR4302540.2137815/1‑94 (MQ=60)

                                                       TGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTAT                                        >  SRR4302540.1025896/1‑94 (MQ=60)

                                                       TGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTAT                                        <  SRR4302540.6509094/94‑1 (MQ=60)

                                                       TGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTAT                                        <  SRR4302540.1900618/94‑1 (MQ=60)

                                                       TGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTAT                                        <  SRR4302540.7939772/94‑1 (MQ=60)

                                                        GGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATG                                       <  SRR4302540.2816469/94‑1 (MQ=60)

                                                         GCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGT                                      <  SRR4302540.5490260/94‑1 (MQ=60)

                                                          CAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTT                                     <  SRR4302540.980789/94‑1 (MQ=60)

                                                          CAAAGTGGTCCTTGCTGATATCAAGGAATCCATCCTCAAAATGGGCGCGGAGAACCTGCGTAATATCGGGGTGATTGGCAACGTTGAGAATGTT                                     >  SRR4302540.2369580/1‑94 (MQ=53)

                                                           AAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTC                                    >  SRR4302540.6607803/1‑94 (MQ=60)

                                                           AAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTC                                    >  SRR4302540.149572/1‑94 (MQ=60)

                                                           AAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTC                                    >  SRR4302540.310460/1‑94 (MQ=60)

                                                            AAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCA                                   <  SRR4302540.2265677/94‑1 (MQ=60)

                                                            AAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCA                                   >  SRR4302540.2633487/1‑94 (MQ=60)

                                                            AAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCA                                   <  SRR4302540.8549835/94‑1 (MQ=60)

                                                            AAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCA                                   <  SRR4302540.2952360/94‑1 (MQ=60)

                                                             AGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAG                                  <  SRR4302540.6585980/94‑1 (MQ=60)

                                                             AGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAG                                  >  SRR4302540.2111953/1‑94 (MQ=60)

                                                             AGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAG                                  <  SRR4302540.3423260/94‑1 (MQ=60)

                                                             AGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAG                                  >  SRR4302540.1193838/1‑94 (MQ=60)

                                                             AGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAG                                  <  SRR4302540.4033855/94‑1 (MQ=60)

                                                             AGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAG                                  >  SRR4302540.9147072/1‑94 (MQ=60)

                                                             AGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAG                                  >  SRR4302540.2687853/1‑94 (MQ=60)

                                                             AGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAG                                  <  SRR4302540.1505879/94‑1 (MQ=60)

                                                               TGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGC                                <  SRR4302540.634874/94‑1 (MQ=60)

                                                                TGTCCTTGCTGATAACAAACAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGGGTGATTGGCAACGTTGAGTATGTTCAGGCG                               <  SRR4302540.7608036/94‑1 (MQ=60)

                                                                GGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCG                               <  SRR4302540.3852715/94‑1 (MQ=60)

                                                                GGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCG                               <  SRR4302540.4329762/94‑1 (MQ=60)

                                                                 GTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGA                              >  SRR4302540.2337789/1‑94 (MQ=60)

                                                                 GTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGA                              >  SRR4302540.5241393/1‑94 (MQ=60)

                                                                 GTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGA                              <  SRR4302540.4526661/94‑1 (MQ=60)

                                                                  TCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAC                             >  SRR4302540.1523580/1‑94 (MQ=60)

                                                                  TCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAA                             <  SRR4302540.139097/94‑1 (MQ=60)

                                                                   TCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAAC                            <  SRR4302540.8661944/94‑1 (MQ=60)

                                                                   CCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAAC                            <  SRR4302540.5449014/94‑1 (MQ=60)

                                                                   CCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAAC                            <  SRR4302540.1348886/94‑1 (MQ=60)

                                                                   CCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAAC                            <  SRR4302540.168789/94‑1 (MQ=60)

                                                                   CCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAAC                            <  SRR4302540.6877445/94‑1 (MQ=60)

                                                                    cttggtgatactgATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTTCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACG                           <  SRR4302540.6648933/81‑1 (MQ=60)

                                                                    CTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACG                           >  SRR4302540.3302570/1‑94 (MQ=60)

                                                                    CTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACG                           <  SRR4302540.1595803/94‑1 (MQ=60)

                                                                    CTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACG                           >  SRR4302540.7744684/1‑94 (MQ=60)

                                                                    CTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACG                           <  SRR4302540.4917598/94‑1 (MQ=60)

                                                                    CTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACG                           >  SRR4302540.9679516/1‑94 (MQ=60)

                                                                    CTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACG                           <  SRR4302540.6648932/94‑1 (MQ=60)

                                                                    CTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACG                           >  SRR4302540.6692326/1‑94 (MQ=60)

                                                                     TTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGC                          >  SRR4302540.9736196/1‑94 (MQ=60)

                                                                     TTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGC                          >  SRR4302540.3257559/1‑94 (MQ=60)

                                                                      TGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCT                         >  SRR4302540.8771334/1‑94 (MQ=60)

                                                                      TGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCT                         >  SRR4302540.3300748/1‑94 (MQ=60)

                                                                      TGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGGGATTGGCAACGTTGAGTATGTTCAGGCGAACGCT                         >  SRR4302540.2998040/1‑94 (MQ=60)

                                                                       GCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTG                        >  SRR4302540.3269838/1‑94 (MQ=60)

                                                                       GCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTG                        <  SRR4302540.9403263/94‑1 (MQ=60)

                                                                        CTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGA                       >  SRR4302540.5680500/1‑94 (MQ=60)

                                                                        CTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGA                       >  SRR4302540.5680499/1‑94 (MQ=60)

                                                                         TGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAG                      >  SRR4302540.6662205/1‑94 (MQ=60)

                                                                         TGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAG                      <  SRR4302540.3588102/94‑1 (MQ=60)

                                                                         TGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAG                      <  SRR4302540.9806844/94‑1 (MQ=60)

                                                                         TGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAG                      <  SRR4302540.6136324/94‑1 (MQ=60)

                                                                         TGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAG                      >  SRR4302540.1210300/1‑94 (MQ=60)

                                                                         TGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAG                      <  SRR4302540.9186007/94‑1 (MQ=60)

                                                                          GATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGG                     <  SRR4302540.6037164/94‑1 (MQ=60)

                                                                          GATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGG                     >  SRR4302540.7172289/1‑94 (MQ=60)

                                                                           ATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGC                    >  SRR4302540.5638825/1‑94 (MQ=60)

                                                                           ATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGC                    <  SRR4302540.4505286/94‑1 (MQ=60)

                                                                           ATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGC                    <  SRR4302540.714729/94‑1 (MQ=60)

                                                                           ATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGC                    >  SRR4302540.7465441/1‑94 (MQ=60)

                                                                            TATCAATGAATCCATGCTCAAAATGGTCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCG                   <  SRR4302540.1035944/94‑1 (MQ=60)

                                                                            TATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCG                   <  SRR4302540.4946200/94‑1 (MQ=60)

                                                                            TATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCG                   >  SRR4302540.5561498/1‑94 (MQ=60)

                                                                             ATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGC                  >  SRR4302540.1508829/1‑94 (MQ=60)

                                                                             ATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGC                  >  SRR4302540.6350326/1‑94 (MQ=60)

                                                                             ATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGC                  >  SRR4302540.6150984/1‑94 (MQ=60)

                                                                             ATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGC                  >  SRR4302540.6299555/1‑94 (MQ=60)

                                                                               CAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTG                >  SRR4302540.475826/1‑94 (MQ=60)

                                                                                 ATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCC              <  SRR4302540.5455938/94‑1 (MQ=60)

                                                                                 ATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCC              <  SRR4302540.8365900/94‑1 (MQ=60)

                                                                                 ATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCC              >  SRR4302540.6317687/1‑94 (MQ=60)

                                                                                 ATGAATCCATGCGCAAAATGGGCCGTGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCC              <  SRR4302540.9384571/94‑1 (MQ=60)

                                                                                   GAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGCGATTGGCAACGTTGAGGATGTTCAGGCGTACGCTGAGGCGCTGCCGT            >  SRR4302540.532464/1‑94 (MQ=60)

                                                                                    AATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTT           >  SRR4302540.7333658/1‑94 (MQ=60)

                                                                                    AATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTT           <  SRR4302540.2486128/94‑1 (MQ=60)

                                                                                    AATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTT           <  SRR4302540.7643220/94‑1 (MQ=60)

                                                                                    AATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTT           >  SRR4302540.1458863/1‑94 (MQ=60)

                                                                                      TCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCC         >  SRR4302540.2920242/1‑94 (MQ=60)

                                                                                      TCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCC         >  SRR4302540.9558582/1‑94 (MQ=60)

                                                                                       CCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCC        >  SRR4302540.7985276/1‑94 (MQ=60)

                                                                                       CCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCC        >  SRR4302540.4087354/1‑94 (MQ=60)

                                                                                       CCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCC        <  SRR4302540.47573/94‑1 (MQ=60)

                                                                                         ATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGG      >  SRR4302540.9281906/1‑94 (MQ=60)

                                                                                         ATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGG      <  SRR4302540.4691309/94‑1 (MQ=60)

                                                                                           GCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGAT    <  SRR4302540.5476664/94‑1 (MQ=60)

                                                                                           GCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGAT    >  SRR4302540.76729/1‑94 (MQ=60)

                                                                                            CTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATA   <  SRR4302540.3196300/94‑1 (MQ=60)

                                                                                            CTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATA   >  SRR4302540.1858874/1‑94 (MQ=60)

                                                                                            CTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATA   <  SRR4302540.392356/94‑1 (MQ=60)

                                                                                            CTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATA   >  SRR4302540.1502560/1‑94 (MQ=60)

                                                                                             TCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATAA  >  SRR4302540.6749585/1‑94 (MQ=60)

                                                                                             TCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATAA  >  SRR4302540.591493/1‑94 (MQ=60)

                                                                                             TCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATAA  <  SRR4302540.3596912/94‑1 (MQ=60)

TGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCCCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATAA  >  NC_000913/4016650‑4016836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`