Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,017,557	A→G	E116G (GAG→GGG)	yigP →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,017,557	0	A	G	99.4%	1126.4 / ‑5.0	356	E116G (GAG→GGG)	yigP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/2); new base G (148/206); total (148/208)
Fisher's exact test for biased strand distribution p-value = 5.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 376 total aligned reads displayed.

AGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCC  >  NC_000913/4017467‑4017646

  cTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTc                                                                                       <  2:3092346/93‑1 (MQ=255)

  cTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTc                                                                                       >  1:5926175/1‑93 (MQ=255)

  cTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTc                                                                                       >  2:8455116/1‑93 (MQ=255)

   ttACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCg                                                                                      <  2:9305462/93‑1 (MQ=255)

   ttACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCg                                                                                      <  1:3448787/93‑1 (MQ=255)

    tACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGa                                                                                     <  2:207412/93‑1 (MQ=255)

     tccGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAc                                                                                    <  1:8837900/92‑1 (MQ=255)

     aCCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAc                                                                                    <  2:8352004/93‑1 (MQ=255)

     aCCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAc                                                                                    <  2:67903/93‑1 (MQ=255)

     aCCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAc                                                                                    >  1:1222694/1‑93 (MQ=255)

       cGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAccc                                                                                  <  2:559803/93‑1 (MQ=255)

       cGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAccc                                                                                  <  1:3470858/93‑1 (MQ=255)

         cACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTg                                                                                >  1:10000329/1‑93 (MQ=255)

         cACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTg                                                                                >  1:3868800/1‑93 (MQ=255)

          aCTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGTGATATTCAGGTGGTCCAACTCTTCGTAGCGCGGGCAGATCTGGCAGGGTTCGGCCCTGc                                                                               <  2:4411232/93‑1 (MQ=255)

           cTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCg                                                                              >  1:5804369/1‑93 (MQ=255)

            tGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCgg                                                                             >  1:624768/1‑93 (MQ=255)

               ttCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAc                                                                          >  1:1669905/1‑93 (MQ=255)

               ttCGCAGTGATGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAc                                                                          <  2:2439180/93‑1 (MQ=255)

                tCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAct                                                                         >  1:4021336/1‑93 (MQ=255)

                tCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAct                                                                         >  2:5918430/1‑93 (MQ=255)

                   cAGTGGTGAGATGGAGGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCGGATCTGGCAGGGTTCGACCCTGCGGAActgct                                                                      <  2:8642067/93‑1 (MQ=255)

                     gtggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTgg                                                                    >  1:2607279/1‑93 (MQ=255)

                     gtggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTgg                                                                    >  1:9801421/1‑93 (MQ=255)

                     gtggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTgg                                                                    <  1:8205419/93‑1 (MQ=255)

                      tggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGc                                                                   >  2:3376544/1‑93 (MQ=255)

                      tggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGc                                                                   >  2:2715954/1‑93 (MQ=255)

                      tggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGc                                                                   >  1:8919040/1‑93 (MQ=255)

                      tggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGCGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGc                                                                   >  2:3677999/1‑93 (MQ=255)

                        gtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGccc                                                                 <  1:9638572/93‑1 (MQ=255)

                        gtgAGCTGGAAGTGCAGGGCGATATTCAGGGGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGccc                                                                 >  1:1564985/1‑93 (MQ=255)

                           aGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCtt                                                              <  2:2488962/93‑1 (MQ=255)

                           aGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCtt                                                              <  2:536474/93‑1 (MQ=255)

                            ggtGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTta                                                             <  1:485020/91‑1 (MQ=255)

                            gCTGGAAGTGCAGGGCGATATTCAGGTTGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGCTTCGACCCTGCGGAACTGCTGCCCCCTta                                                             <  2:1749172/93‑1 (MQ=255)

                            gCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTta                                                             <  2:9446953/93‑1 (MQ=255)

                              tGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGTCCCCTtata                                                           <  2:9895099/93‑1 (MQ=255)

                              tGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTtata                                                           <  1:834849/93‑1 (MQ=255)

                              gggAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTtata                                                           <  1:6034316/92‑1 (MQ=255)

                               ggAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAc                                                          >  1:9130204/1‑93 (MQ=255)

                                  aGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCgg                                                       <  2:5013753/93‑1 (MQ=255)

                                   gTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGt                                                      >  1:2339091/1‑93 (MQ=255)

                                   gTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGt                                                      >  2:724469/1‑93 (MQ=255)

                                     gCAGGGCGATATTCAGGTGGTGCAAAGCTTCGTTGCGTTGGCAGATCTGGCATGTTTCGACCCTGCGGAACTGCTGGGACCTTATACCGGTGa                                                    <  2:6310723/93‑1 (MQ=255)

                                     gCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGa                                                    >  1:3734682/1‑93 (MQ=255)

                                     gCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGa                                                    <  1:4996155/93‑1 (MQ=255)

                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                 >  2:8868542/1‑93 (MQ=255)

                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                 >  1:2939930/1‑93 (MQ=255)

                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                 <  1:9443558/93‑1 (MQ=255)

                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                 >  2:6655135/1‑93 (MQ=255)

                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                 <  1:3550274/93‑1 (MQ=255)

                                            gATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCATATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgcc                                             <  2:4589882/93‑1 (MQ=255)

                                            gATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgcc                                             >  2:4910804/1‑93 (MQ=255)

                                             atatTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgccg                                            <  1:8754285/93‑1 (MQ=255)

                                             atatTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgccg                                            >  1:7553430/1‑93 (MQ=255)

                                              tatTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgccgc                                           <  1:5659645/93‑1 (MQ=255)

                                              tatTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgccgc                                           >  2:6868572/1‑93 (MQ=255)

                                              tatTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgccgc                                           <  1:4351495/93‑1 (MQ=255)

                                                ttCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTg                                         <  2:4526226/93‑1 (MQ=255)

                                                 tCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGa                                        <  2:6015849/93‑1 (MQ=255)

                                                 tCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGa                                        <  2:3842502/93‑1 (MQ=255)

                                                  cAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGACCTGCTGGCCCCTTATACCGGTGATATCGCCGCTGaa                                       <  1:1428998/93‑1 (MQ=255)

                                                  cAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGaa                                       <  2:8181593/93‑1 (MQ=255)

                                                  cAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGaa                                       <  2:6963394/93‑1 (MQ=255)

                                                  cAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGaa                                       <  2:1622656/93‑1 (MQ=255)

                                                   aGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAg                                      <  2:5164407/93‑1 (MQ=255)

                                                        gtgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATc                                 <  1:659385/93‑1 (MQ=255)

                                                        gtgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATc                                 <  2:6213873/93‑1 (MQ=255)

                                                         tgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCa                                <  2:9657258/93‑1 (MQ=255)

                                                         tgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCa                                <  2:1299323/93‑1 (MQ=255)

                                                          gCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAg                               <  1:5308003/93‑1 (MQ=255)

                                                          gCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAg                               >  1:3000941/1‑93 (MQ=255)

                                                             aaaCTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCaa                            <  1:7134287/93‑1 (MQ=255)

                                                             aaaCTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCaa                            >  1:6813974/1‑93 (MQ=255)

                                                               aCTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAg                          <  2:2575159/93‑1 (MQ=255)

                                                                cTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGc                         >  1:6611101/1‑93 (MQ=255)

                                                                 ttCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGcc                        <  1:3281505/93‑1 (MQ=255)

                                                                  tCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCa                       <  1:8544607/93‑1 (MQ=255)

                                                                   cGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAt                      <  2:5727408/93‑1 (MQ=255)

                                                                    gTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATg                     <  2:1988742/93‑1 (MQ=255)

                                                                    gTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATg                     <  2:2974462/93‑1 (MQ=255)

                                                                    gTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATg                     >  2:6589579/1‑93 (MQ=255)

                                                                    gTTGCGCTGGCAGATCTGGCAGGGTGCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATg                     <  2:7411534/93‑1 (MQ=255)

                                                                    gTTGCGCTGGCAGAGCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATCCCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATg                     <  2:4477086/93‑1 (MQ=255)

                                                                       gcgcTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATgcgc                  <  1:8701205/93‑1 (MQ=255)

                                                                        cgcTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGcgcg                 <  2:4640740/93‑1 (MQ=255)

                                                                          cTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGTCCCCTTATACCGGTGATCTCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGa               <  1:1827519/93‑1 (MQ=255)

                                                                           tGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAg              >  2:1465385/1‑93 (MQ=255)

                                                                            ggCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAgg             <  2:4337302/93‑1 (MQ=255)

                                                                               aGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGgcgc          >  2:7989166/1‑93 (MQ=255)

                                                                                  tCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCaaa       <  1:8314654/93‑1 (MQ=255)

                                                                                   cTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAg      >  2:76832/1‑93 (MQ=255)

                                                                                   cTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAg      >  2:1851418/1‑93 (MQ=255)

                                                                                    tGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGt     <  2:9161924/93‑1 (MQ=255)

                                                                                     ggCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGtt    >  1:537108/1‑93 (MQ=255)

                                                                                      gCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTc   >  1:4556691/1‑93 (MQ=255)

                                                                                       cAGGGTTCGACCCTGCGGAACTGCTGGCGCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTcc  <  1:7966239/93‑1 (MQ=255)

                                                                                       cAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTcc  <  1:209185/93‑1 (MQ=255)

                                                                                       cAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTcc  <  2:7083385/93‑1 (MQ=255)

                                                                                       cAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTcc  <  2:6559088/93‑1 (MQ=255)

AGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCC  >  NC_000913/4017467‑4017646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGC  >  NC_000913/4017464‑4017649

AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGG                                                                                              <  SRR4302540.4524905/94‑1 (MQ=60)

 GCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGG                                                                                             <  SRR4302540.4784329/94‑1 (MQ=60)

   AGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTT                                                                                           >  SRR4302540.9735850/1‑94 (MQ=60)

   AGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTT                                                                                           >  SRR4302540.5706327/1‑94 (MQ=60)

   AGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTT                                                                                           <  SRR4302540.3001997/94‑1 (MQ=60)

    GCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTC                                                                                          >  SRR4302540.5991654/1‑94 (MQ=60)

     CTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCTGGGTTCG                                                                                         >  SRR4302540.2477996/1‑94 (MQ=60)

      TTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGA                                                                                        >  SRR4302540.3165477/1‑94 (MQ=60)

      TTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGA                                                                                        <  SRR4302540.3486301/94‑1 (MQ=60)

       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                       <  SRR4302540.312928/94‑1 (MQ=60)

       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                       >  SRR4302540.1235200/1‑94 (MQ=60)

       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                       <  SRR4302540.6024839/94‑1 (MQ=60)

       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                       <  SRR4302540.3601500/94‑1 (MQ=60)

        TCCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACC                                                                                      <  SRR4302540.8940121/94‑1 (MQ=60)

        ACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACC                                                                                      <  SRR4302540.4785747/94‑1 (MQ=60)

         CCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCC                                                                                     >  SRR4302540.8200144/1‑94 (MQ=60)

         CCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCC                                                                                     >  SRR4302540.8200143/1‑94 (MQ=60)

          CGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCT                                                                                    <  SRR4302540.3508644/94‑1 (MQ=60)

          CGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCT                                                                                    <  SRR4302540.8858768/94‑1 (MQ=60)

          CGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCT                                                                                    >  SRR4302540.8980831/1‑94 (MQ=60)

           GCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTG                                                                                   >  SRR4302540.3910856/1‑94 (MQ=60)

           GCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTG                                                                                   >  SRR4302540.10116833/1‑94 (MQ=60)

            CACTGATTCGCAGTGGTGAGCTGGAAGTGGAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGC                                                                                  >  SRR4302540.8441740/1‑94 (MQ=60)

            CACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGATCCTGC                                                                                  <  SRR4302540.3322763/94‑1 (MQ=60)

             ACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCG                                                                                 >  SRR4302540.5868505/1‑94 (MQ=60)

             ACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCG                                                                                 <  SRR4302540.8812931/94‑1 (MQ=60)

              CTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGG                                                                                >  SRR4302540.631416/1‑94 (MQ=60)

              CTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGG                                                                                <  SRR4302540.2507063/94‑1 (MQ=60)

              CTGATTCGCAGTGGTGAACTGGAAGTGCAGGGCGATATTCAGGTGATGCAAAACTTCGTTACGATGGCAGATCAGGCAGGGTTAGACACTGCGG                                                                                <  SRR4302540.9068518/94‑1 (MQ=60)

                 ATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAC                                                                             <  SRR4302540.5744105/94‑1 (MQ=60)

                 ATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAC                                                                             <  SRR4302540.8329507/94‑1 (MQ=60)

                 ATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAC                                                                             >  SRR4302540.1688070/1‑94 (MQ=60)

                  TTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACT                                                                            >  SRR4302540.4064669/1‑94 (MQ=60)

                  TTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACT                                                                            <  SRR4302540.5190312/94‑1 (MQ=60)

                   TCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTG                                                                           <  SRR4302540.6806450/94‑1 (MQ=60)

                   TCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTG                                                                           <  SRR4302540.1263810/94‑1 (MQ=60)

                   TCGCAGTGGTGAGCTGGAAGGGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTG                                                                           <  SRR4302540.6098909/94‑1 (MQ=60)

                     GCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCT                                                                         <  SRR4302540.2503694/94‑1 (MQ=60)

                      CAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTG                                                                        >  SRR4302540.300050/1‑94 (MQ=60)

                       AGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGG                                                                       <  SRR4302540.7271379/94‑1 (MQ=60)

                       AGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGG                                                                       >  SRR4302540.5404835/1‑94 (MQ=60)

                       AGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGG                                                                       >  SRR4302540.9916176/1‑94 (MQ=60)

                       AGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGG                                                                       >  SRR4302540.2635417/1‑94 (MQ=60)

                        GTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGC                                                                      <  SRR4302540.9779244/94‑1 (MQ=60)

                        GTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGC                                                                      >  SRR4302540.4123979/1‑94 (MQ=60)

                        GTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGC                                                                      <  SRR4302540.8300773/94‑1 (MQ=60)

                        GTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGC                                                                      >  SRR4302540.9022338/1‑94 (MQ=60)

                         TGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCC                                                                     >  SRR4302540.3900516/1‑94 (MQ=60)

                          GGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCC                                                                    <  SRR4302540.7039681/94‑1 (MQ=60)

                          GGTGAGCTGGAAGTGCAGGGCGATATTCAGGGGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCC                                                                    >  SRR4302540.1582160/1‑94 (MQ=60)

                           GTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCC                                                                   <  SRR4302540.9752116/94‑1 (MQ=60)

                           GTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCC                                                                   >  SRR4302540.6732667/1‑94 (MQ=60)

                            TGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCT                                                                  <  SRR4302540.3508797/94‑1 (MQ=60)

                               GGTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTAT                                                               <  SRR4302540.490208/94‑1 (MQ=60)

                               GCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAACCTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTAT                                                               <  SRR4302540.6301596/94‑1 (MQ=60)

                                CTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATA                                                              <  SRR4302540.1810853/94‑1 (MQ=60)

                                CTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATA                                                              <  SRR4302540.8432739/94‑1 (MQ=60)

                                 TGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                             <  SRR4302540.3608339/94‑1 (MQ=60)

                                 TGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                             >  SRR4302540.9239938/1‑94 (MQ=60)

                                 TGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                             <  SRR4302540.843715/94‑1 (MQ=60)

                                 TGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                             <  SRR4302540.6363264/94‑1 (MQ=60)

                                 TGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                             >  SRR4302540.4326823/1‑94 (MQ=60)

                                 TGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                             >  SRR4302540.4599964/1‑94 (MQ=60)

                                 GGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                             <  SRR4302540.6101290/94‑1 (MQ=60)

                                  GGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACC                                                            <  SRR4302540.3803388/94‑1 (MQ=60)

                                   GAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGNAACTGCTGGCCCCNTATAngn                                                           >  SRR4302540.8470335/1‑91 (MQ=60)

                                     AGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGT                                                         >  SRR4302540.2364296/1‑94 (MQ=60)

                                     AGTGCAGGGCGATATTCAGGTGGTGAAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGT                                                         <  SRR4302540.4203074/94‑1 (MQ=60)

                                      GTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTG                                                        >  SRR4302540.3356753/1‑94 (MQ=60)

                                       TGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGA                                                       >  SRR4302540.3775430/1‑94 (MQ=60)

                                       TGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGA                                                       >  SRR4302540.6868668/1‑94 (MQ=60)

                                       TGCAGGGCGATATTCAGGGGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGCCCCTGGTGAACTGCTGGCCCCTTctcccgagga                                                       >  SRR4302540.2655399/1‑84 (MQ=60)

                                        TCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGAT                                                      <  SRR4302540.8659466/94‑1 (MQ=60)

                                        GCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGAT                                                      >  SRR4302540.5644821/1‑94 (MQ=60)

                                        GCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGAT                                                      <  SRR4302540.5050241/94‑1 (MQ=60)

                                        GCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGAT                                                      <  SRR4302540.5050242/94‑1 (MQ=60)

                                          AGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATAT                                                    >  SRR4302540.3678400/1‑94 (MQ=60)

                                          AGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATAT                                                    <  SRR4302540.1341562/94‑1 (MQ=60)

                                          AGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATAT                                                    >  SRR4302540.2972212/1‑94 (MQ=60)

                                           GGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATC                                                   >  SRR4302540.9885116/1‑94 (MQ=60)

                                           GGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATC                                                   <  SRR4302540.8338887/94‑1 (MQ=60)

                                           GGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATC                                                   <  SRR4302540.3589064/94‑1 (MQ=60)

                                           GGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATC                                                   >  SRR4302540.9112228/1‑94 (MQ=60)

                                           GGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATC                                                   <  SRR4302540.9555678/94‑1 (MQ=60)

                                            GGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCG                                                  <  SRR4302540.2323327/94‑1 (MQ=60)

                                            GGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCG                                                  <  SRR4302540.6673177/94‑1 (MQ=60)

                                            GGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCG                                                  <  SRR4302540.6673175/94‑1 (MQ=60)

                                             GCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGC                                                 >  SRR4302540.4033627/1‑94 (MQ=60)

                                              tgataatccgggtGTGCAAAACTTCGTGTCCCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACGGCTGGCCCCTTATACCGGTGATATCGCC                                                <  SRR4302540.568702/81‑1 (MQ=60)

                                              CGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCC                                                <  SRR4302540.6365508/94‑1 (MQ=60)

                                              CGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCC                                                <  SRR4302540.6365507/94‑1 (MQ=60)

                                              CGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGATTGCCCCTTATACCGGTGATATCGCC                                                >  SRR4302540.7295033/1‑94 (MQ=60)

                                              CGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGGTCGACCCTGCGGAACTGCTTGCCCCTTATACCGGTGATATCGCC                                                >  SRR4302540.4932880/1‑94 (MQ=60)

                                               GATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCG                                               >  SRR4302540.1585906/1‑94 (MQ=60)

                                               GATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCG                                               >  SRR4302540.7638123/1‑94 (MQ=60)

                                                ATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGC                                              >  SRR4302540.6998058/1‑94 (MQ=60)

                                                ATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGC                                              <  SRR4302540.8855839/94‑1 (MQ=60)

                                                 TATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCT                                             >  SRR4302540.1013881/1‑94 (MQ=60)

                                                 TATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCT                                             <  SRR4302540.5721964/94‑1 (MQ=60)

                                                 TATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCT                                             <  SRR4302540.4398832/94‑1 (MQ=60)

                                                  ATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTG                                            <  SRR4302540.10158245/94‑1 (MQ=60)

                                                  ATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTG                                            >  SRR4302540.6190348/1‑94 (MQ=60)

                                                    TCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAA                                          <  SRR4302540.4838974/94‑1 (MQ=60)

                                                    TCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAA                                          <  SRR4302540.9395842/94‑1 (MQ=60)

                                                     CAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGACCTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAG                                         <  SRR4302540.1444468/94‑1 (MQ=60)

                                                     CAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAG                                         <  SRR4302540.5749899/94‑1 (MQ=60)

                                                     CAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAG                                         <  SRR4302540.4400677/94‑1 (MQ=60)

                                                         TGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAAT                                     <  SRR4302540.1649314/94‑1 (MQ=60)

                                                         TGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAAT                                     <  SRR4302540.3032694/94‑1 (MQ=60)

                                                          GGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATC                                    <  SRR4302540.4840308/94‑1 (MQ=60)

                                                           GTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCA                                   <  SRR4302540.3526749/94‑1 (MQ=60)

                                                           GTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCA                                   <  SRR4302540.8802513/94‑1 (MQ=60)

                                                           GTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCA                                   >  SRR4302540.1457302/1‑94 (MQ=60)

                                                           GTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCA                                   <  SRR4302540.666422/94‑1 (MQ=60)

                                                            TGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAG                                  >  SRR4302540.3033997/1‑94 (MQ=60)

                                                             GCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGC                                 <  SRR4302540.5366096/94‑1 (MQ=60)

                                                             GCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGC                                 <  SRR4302540.5366094/94‑1 (MQ=60)

                                                             GCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGC                                 >  SRR4302540.839509/1‑94 (MQ=60)

                                                             GCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGC                                 >  SRR4302540.8422993/1‑94 (MQ=60)

                                                              CAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCA                                <  SRR4302540.3809675/94‑1 (MQ=60)

                                                              CAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCA                                >  SRR4302540.4558554/1‑94 (MQ=60)

                                                              CAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCA                                <  SRR4302540.8713979/94‑1 (MQ=60)

                                                               AAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAA                               >  SRR4302540.6889388/1‑94 (MQ=60)

                                                               AAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAA                               >  SRR4302540.5926836/1‑94 (MQ=60)

                                                                AAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAA                              <  SRR4302540.4059854/94‑1 (MQ=60)

                                                                AAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAA                              <  SRR4302540.7213768/94‑1 (MQ=60)

                                                                AAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAA                              <  SRR4302540.3211424/94‑1 (MQ=60)

                                                                AAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAA                              >  SRR4302540.1364964/1‑94 (MQ=60)

                                                                 AACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAG                             <  SRR4302540.8272690/94‑1 (MQ=60)

                                                                 AACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGCGATATCGCCGCGGATGGAATCAGCAAAG                             >  SRR4302540.9037051/1‑94 (MQ=60)

                                                                  ACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGC                            >  SRR4302540.6684302/1‑94 (MQ=60)

                                                                   CTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCC                           <  SRR4302540.1583699/94‑1 (MQ=60)

                                                                    TTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCA                          >  SRR4302540.1785829/1‑94 (MQ=60)

                                                                    TTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCA                          <  SRR4302540.3317361/94‑1 (MQ=60)

                                                                     TCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAT                         <  SRR4302540.8643882/94‑1 (MQ=60)

                                                                     TCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAT                         <  SRR4302540.601161/94‑1 (MQ=60)

                                                                     TCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAT                         <  SRR4302540.5328660/94‑1 (MQ=60)

                                                                      CGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATG                        >  SRR4302540.7530256/1‑94 (MQ=60)

                                                                      CGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATG                        <  SRR4302540.533249/94‑1 (MQ=60)

                                                                      CGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATG                        <  SRR4302540.7154777/94‑1 (MQ=60)

                                                                       GTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGC                       >  SRR4302540.5850130/1‑94 (MQ=60)

                                                                         TGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGC                     >  SRR4302540.9535720/1‑94 (MQ=60)

                                                                          GCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCG                    <  SRR4302540.8802205/94‑1 (MQ=60)

                                                                           CGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGG                   <  SRR4302540.288848/94‑1 (MQ=60)

                                                                           CGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGG                   <  SRR4302540.8691584/94‑1 (MQ=60)

                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCTGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                 <  SRR4302540.8880003/94‑1 (MQ=60)

                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGTCCCCTTATACCGGTGATCTCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                 <  SRR4302540.1847506/94‑1 (MQ=60)

                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                 <  SRR4302540.150017/94‑1 (MQ=60)

                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                 <  SRR4302540.2182845/94‑1 (MQ=60)

                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                 <  SRR4302540.3362900/94‑1 (MQ=60)

                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                 <  SRR4302540.5410800/94‑1 (MQ=60)

                                                                              TGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGG                >  SRR4302540.7983551/1‑94 (MQ=60)

                                                                              TGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGG                >  SRR4302540.7983545/1‑94 (MQ=60)

                                                                              TGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGG                >  SRR4302540.9718413/1‑94 (MQ=60)

                                                                               GGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGC               >  SRR4302540.5870406/1‑94 (MQ=60)

                                                                                GCAGATCTGGCAGGGTTCGACCCTGCGGAACTACTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCG              <  SRR4302540.2027235/94‑1 (MQ=60)

                                                                                  AGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCA            >  SRR4302540.3571096/1‑94 (MQ=60)

                                                                                  AGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCA            >  SRR4302540.1561396/1‑94 (MQ=60)

                                                                                   GATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGGCGCTGCAGGAATCAGCAAAGCCATGCGCGGAGGCGCAA           >  SRR4302540.9000804/1‑94 (MQ=60)

                                                                                   GATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAA           >  SRR4302540.9323562/1‑94 (MQ=60)

                                                                                    ATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAA          >  SRR4302540.9598676/1‑94 (MQ=60)

                                                                                     TCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAG         <  SRR4302540.8411173/94‑1 (MQ=60)

                                                                                     TCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAG         <  SRR4302540.8904744/94‑1 (MQ=60)

                                                                                     TCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAG         <  SRR4302540.2168564/94‑1 (MQ=60)

                                                                                      CTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGT        <  SRR4302540.2088879/94‑1 (MQ=60)

                                                                                       TGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTT       >  SRR4302540.8601704/1‑94 (MQ=60)

                                                                                       TGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTT       >  SRR4302540.542922/1‑94 (MQ=60)

                                                                                        GGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTC      <  SRR4302540.3487037/94‑1 (MQ=60)

                                                                                        GGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTC      >  SRR4302540.4605953/1‑94 (MQ=60)

                                                                                        GGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTC      <  SRR4302540.3487036/94‑1 (MQ=60)

                                                                                         GCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCC     <  SRR4302540.5439953/94‑1 (MQ=60)

                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCGCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT    <  SRR4302540.8059077/94‑1 (MQ=60)

                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT    <  SRR4302540.1955393/94‑1 (MQ=60)

                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT    <  SRR4302540.211236/94‑1 (MQ=60)

                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT    >  SRR4302540.3149431/1‑94 (MQ=60)

                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT    <  SRR4302540.6238/94‑1 (MQ=60)

                                                                                           AGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTG   >  SRR4302540.3053461/1‑94 (MQ=60)

                                                                                           AGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTG   >  SRR4302540.6943584/1‑94 (MQ=60)

                                                                                           AGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTG   >  SRR4302540.101876/1‑94 (MQ=60)

                                                                                           AGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTG   >  SRR4302540.2937252/1‑94 (MQ=60)

                                                                                           AGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTG   <  SRR4302540.3596321/94‑1 (MQ=60)

                                                                                           AGCGTTCGACCCTGCAGAACTGCTGGCCCCTTATCCCGGTGATATCGCCGCTGAAGGAATCAGCAAATCCATGCGCGGAGGCGCAAAGTTCCTG   <  SRR4302540.8142254/94‑1 (MQ=60)

                                                                                            GGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGC  >  SRR4302540.167976/1‑94 (MQ=60)

                                                                                            GGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGAAAAGTTCCTGA  >  SRR4302540.8822295/1‑94 (MQ=60)

AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGC  >  NC_000913/4017464‑4017649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`