Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,023,531 T→C H318H (CAT→CAC)  yigC → putative oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,023,5310TC98.7% 1513.8 / 2.3 476H318H (CAT→CAC) yigCputative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (1/5);  new base C (277/193);  total (278/198)
Fisher's exact test for biased strand distribution p-value = 8.66e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 485 total aligned reads displayed.

TGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTT  >  NC_000913/4023441‑4023620
                                                                                          |                                                                                         
tGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTc                                                                                         >  1:7659984/1‑93 (MQ=255)
tGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTc                                                                                         >  2:4595407/1‑93 (MQ=255)
   cGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCAc                                                                                      <  2:7506458/93‑1 (MQ=255)
     aCCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCt                                                                                    <  1:5509178/93‑1 (MQ=255)
     aCCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCt                                                                                    >  2:8914656/1‑93 (MQ=255)
       cacaCCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCtat                                                                                  >  2:3614906/1‑93 (MQ=255)
        acacCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGCAGATGCGATTTACCACTCCACCtata                                                                                 >  2:7162883/1‑93 (MQ=255)
        acacCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCtatc                                                                                 >  2:3111041/1‑92 (MQ=255)
         cacCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATAc                                                                                <  2:230867/93‑1 (MQ=255)
         cacCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATAc                                                                                >  1:9183966/1‑93 (MQ=255)
         cacCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATAc                                                                                >  2:6370854/1‑93 (MQ=255)
         cacCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATAc                                                                                >  1:4253511/1‑93 (MQ=255)
           ccGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGACGATGCGATTTACCACTCCACCTATACCg                                                                              >  1:241406/1‑93 (MQ=255)
            cGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCgg                                                                             >  1:4154059/1‑93 (MQ=255)
             ggTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCggg                                                                            >  1:5889801/1‑93 (MQ=255)
              gTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGc                                                                           >  1:1121703/1‑93 (MQ=255)
               ttACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCg                                                                          >  1:8349472/1‑93 (MQ=255)
               ttACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCg                                                                          <  2:3864794/93‑1 (MQ=255)
                tACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGt                                                                         >  2:1814090/1‑93 (MQ=255)
                  cTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTcc                                                                       <  2:1458654/93‑1 (MQ=255)
                   tataATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCg                                                                      <  1:4644706/93‑1 (MQ=255)
                   tataATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCg                                                                      >  2:515000/1‑93 (MQ=255)
                     taATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGcc                                                                    >  2:9288247/1‑93 (MQ=255)
                       aTGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAg                                                                  <  2:772495/93‑1 (MQ=255)
                        tGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGa                                                                 <  1:9937692/93‑1 (MQ=255)
                          aaGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATg                                                               <  2:6814045/93‑1 (MQ=255)
                          aaGTCGATAATTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATg                                                               <  1:6407930/93‑1 (MQ=255)
                           aGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGa                                                              >  2:4981509/1‑93 (MQ=255)
                             tCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGc                                                            >  2:8482234/1‑93 (MQ=255)
                             tCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGc                                                            <  2:7993856/93‑1 (MQ=255)
                             tCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGc                                                            >  1:1360410/1‑93 (MQ=255)
                               gATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGccc                                                          >  2:5391192/1‑93 (MQ=255)
                                aTAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCcg                                                         >  2:3367567/1‑93 (MQ=255)
                                aTAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACAACTCCACCTATACCGGGCGTCCGCCAGATGAGCCcg                                                         >  1:3014362/1‑93 (MQ=255)
                                 tAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCcgc                                                        <  1:3974736/93‑1 (MQ=255)
                                 tAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCcgc                                                        <  2:8724238/93‑1 (MQ=255)
                                   gTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCgg                                                      >  2:2165488/1‑93 (MQ=255)
                                    tttCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGt                                                     >  1:5190218/1‑93 (MQ=255)
                                     ttCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTg                                                    >  1:1777557/1‑93 (MQ=255)
                                       ccttgTATTTCCCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCt                                                  <  2:1942536/89‑1 (MQ=255)
                                        ccGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTg                                                 <  2:704340/93‑1 (MQ=255)
                                         cGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTgg                                                >  1:8307505/1‑93 (MQ=255)
                                          ggTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTggg                                               >  2:5706764/1‑93 (MQ=255)
                                          ggTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTggg                                               <  2:4880289/93‑1 (MQ=255)
                                           gTATTTCCCGTGACGCATATTACCCAGCGTGAAGATCCGATTTACCACTCCGCCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgt                                              <  2:4011054/93‑1 (MQ=255)
                                           gTATTTACCGTGACGCATATTACTCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgt                                              <  2:5535391/93‑1 (MQ=255)
                                           gTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgt                                              >  1:8172201/1‑93 (MQ=255)
                                           gTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgt                                              >  2:1264270/1‑93 (MQ=255)
                                           gTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgt                                              <  1:7328745/93‑1 (MQ=255)
                                            tATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgtg                                             >  2:740778/1‑93 (MQ=255)
                                            tATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgtg                                             >  1:165954/1‑93 (MQ=255)
                                            tATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgtg                                             >  1:966732/1‑93 (MQ=255)
                                             aTTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgtgt                                            <  2:9127171/93‑1 (MQ=255)
                                             aTTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGgtgt                                            <  1:6919767/93‑1 (MQ=255)
                                              tttACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTc                                           >  1:6582899/1‑93 (MQ=255)
                                                 aCCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCa                                        <  1:6117590/93‑1 (MQ=255)
                                                  ccGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCAc                                       >  1:7125941/1‑93 (MQ=255)
                                                     tGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGa                                    <  1:6278951/93‑1 (MQ=255)
                                                     tGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGa                                    <  1:8845727/93‑1 (MQ=255)
                                                        cGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACg                                 >  2:4782793/1‑93 (MQ=255)
                                                         gCATATTACCCAGCGTGAAGATGCTATTCACCACCCCACCTATCCCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGa                                <  1:4969863/93‑1 (MQ=255)
                                                         gCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGa                                <  2:3718176/93‑1 (MQ=255)
                                                          cATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGaa                               <  2:3487088/93‑1 (MQ=255)
                                                           atatTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAg                              >  2:6037549/1‑93 (MQ=255)
                                                           atatTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAg                              <  1:2650233/93‑1 (MQ=255)
                                                            tatTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAgt                             >  1:3207803/1‑93 (MQ=255)
                                                            tatTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAgt                             >  2:6511903/1‑93 (MQ=255)
                                                             atTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAgtg                            <  2:8265919/93‑1 (MQ=255)
                                                             atTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAgtg                            >  2:8623096/1‑93 (MQ=255)
                                                               tACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGtt                          <  2:9575511/93‑1 (MQ=255)
                                                                aCCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGttt                         >  2:4158225/1‑93 (MQ=255)
                                                                aCCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGttt                         >  2:2558510/1‑93 (MQ=255)
                                                                  ccAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTtgt                       >  2:810392/1‑93 (MQ=255)
                                                                  ccAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTtgt                       <  2:9428600/93‑1 (MQ=255)
                                                                    aGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGc                     <  1:7997905/93‑1 (MQ=255)
                                                                     gCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGcg                    >  2:2891742/1‑92 (MQ=255)
                                                                     gCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGcc                    <  2:1735013/93‑1 (MQ=255)
                                                                      cGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCg                   >  2:784146/1‑93 (MQ=255)
                                                                       gTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGa                  >  2:5257894/1‑93 (MQ=255)
                                                                       gTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGa                  <  1:9340240/93‑1 (MQ=255)
                                                                        tGAAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAt                 <  2:8349471/93‑1 (MQ=255)
                                                                        tGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAt                 <  2:5072054/93‑1 (MQ=255)
                                                                        tGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAt                 >  1:5769245/1‑93 (MQ=255)
                                                                         gAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAtt                <  1:3823031/93‑1 (MQ=255)
                                                                         gAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAtt                <  2:6605813/93‑1 (MQ=255)
                                                                          aaGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTc               >  1:7882445/1‑93 (MQ=255)
                                                                          aaGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTc               >  1:10005579/1‑93 (MQ=255)
                                                                          aaGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTc               <  1:4701375/93‑1 (MQ=255)
                                                                           aGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCt              <  1:198215/93‑1 (MQ=255)
                                                                            gATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGCTTCTg             >  1:155313/1‑93 (MQ=255)
                                                                             aTGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGc            >  1:3479676/1‑93 (MQ=255)
                                                                             aTGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGc            <  1:2197687/93‑1 (MQ=255)
                                                                              tGCGATTTACCACTCCACCTATAACGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGCAGTGTTTGTGACGATTCTGCa           >  1:370136/1‑93 (MQ=255)
                                                                               gCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCaa          >  1:359370/1‑93 (MQ=255)
                                                                                cGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCaaa         <  2:8793288/93‑1 (MQ=255)
                                                                                 gATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCaaaa        >  1:981059/1‑93 (MQ=255)
                                                                                  aTTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCaaaaa       <  1:9510328/93‑1 (MQ=255)
                                                                                   tttACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAAc      >  1:8566992/1‑93 (MQ=255)
                                                                                   tttACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAAc      <  1:5079280/93‑1 (MQ=255)
                                                                                    ttACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAcaca     >  1:4457475/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTT  >  NC_000913/4023441‑4023620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 262 total aligned reads displayed.
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCG  >  NC_000913/4023438‑4023624
                                                                                             |                                                                                             
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCAC                                                                                               >  SRR4302540.10016496/1‑94 (MQ=60)
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCAC                                                                                               >  SRR4302540.4850621/1‑94 (MQ=60)
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCAC                                                                                               >  SRR4302540.5321839/1‑94 (MQ=60)
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCAC                                                                                               >  SRR4302540.709286/1‑94 (MQ=60)
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCAC                                                                                               >  SRR4302540.7998443/1‑94 (MQ=60)
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCAC                                                                                               <  SRR4302540.1447141/94‑1 (MQ=60)
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCAC                                                                                               >  SRR4302540.1345515/1‑94 (MQ=60)
GTATGGCGACCACACCGGTTACTATAATGAAGTCGAGAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCAC                                                                                               <  SRR4302540.174717/94‑1 (MQ=60)
 TATGGCGACCACACCGGTTACTATAATGAAGTCGCTAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACT                                                                                              >  SRR4302540.717249/1‑94 (MQ=60)
 TATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACT                                                                                              <  SRR4302540.2861195/94‑1 (MQ=60)
  ATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTC                                                                                             >  SRR4302540.7746238/1‑94 (MQ=60)
   TGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCC                                                                                            >  SRR4302540.8583983/1‑94 (MQ=60)
    GGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCA                                                                                           <  SRR4302540.5735193/94‑1 (MQ=60)
     GCGTCCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCAC                                                                                          <  SRR4302540.8422418/94‑1 (MQ=60)
       GACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCT                                                                                        >  SRR4302540.140169/1‑94 (MQ=60)
       GACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCT                                                                                        >  SRR4302540.5658937/1‑94 (MQ=60)
       GACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCT                                                                                        >  SRR4302540.5658936/1‑94 (MQ=60)
       GACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCT                                                                                        >  SRR4302540.9091831/1‑94 (MQ=60)
       GACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCT                                                                                        >  SRR4302540.9336220/1‑94 (MQ=60)
        ACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTA                                                                                       <  SRR4302540.5569852/94‑1 (MQ=60)
        ACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTA                                                                                       >  SRR4302540.5369605/1‑94 (MQ=60)
        ACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTA                                                                                       >  SRR4302540.311113/1‑94 (MQ=60)
         CCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTAT                                                                                      <  SRR4302540.3789358/94‑1 (MQ=60)
         CCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTAT                                                                                      >  SRR4302540.8153020/1‑94 (MQ=60)
          CACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATA                                                                                     >  SRR4302540.9462288/1‑94 (MQ=60)
          CACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATA                                                                                     <  SRR4302540.7452056/94‑1 (MQ=60)
          CACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATA                                                                                     <  SRR4302540.5161622/94‑1 (MQ=60)
           ACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATAC                                                                                    >  SRR4302540.9294111/1‑94 (MQ=60)
           ACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATAC                                                                                    <  SRR4302540.9937129/94‑1 (MQ=60)
           ACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATAC                                                                                    >  SRR4302540.4299789/1‑94 (MQ=60)
            CACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACC                                                                                   >  SRR4302540.4194012/1‑94 (MQ=60)
            CACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACC                                                                                   <  SRR4302540.7836994/94‑1 (MQ=60)
             ACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGACGATGCGATTTACCACTCCACCTATACCG                                                                                  >  SRR4302540.243739/1‑94 (MQ=60)
             ACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCAACTATACCG                                                                                  >  SRR4302540.7176332/1‑94 (MQ=60)
              CCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGG                                                                                 <  SRR4302540.8086955/94‑1 (MQ=60)
              CCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGG                                                                                 <  SRR4302540.1727421/94‑1 (MQ=60)
               CGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGG                                                                                >  SRR4302540.5954872/1‑94 (MQ=60)
                GGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGC                                                                               >  SRR4302540.9844254/1‑94 (MQ=60)
                GGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGC                                                                               >  SRR4302540.1133352/1‑94 (MQ=60)
                 GTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCG                                                                              >  SRR4302540.8446378/1‑94 (MQ=60)
                  TTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGT                                                                             >  SRR4302540.207434/1‑94 (MQ=60)
                   TACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTC                                                                            >  SRR4302540.778993/1‑94 (MQ=60)
                    ACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCC                                                                           >  SRR4302540.6192942/1‑94 (MQ=60)
                     CTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCG                                                                          >  SRR4302540.9638963/1‑94 (MQ=60)
                     CTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCG                                                                          >  SRR4302540.5353211/1‑94 (MQ=60)
                     CTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCG                                                                          >  SRR4302540.7235404/1‑94 (MQ=60)
                      TATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGC                                                                         >  SRR4302540.3880924/1‑94 (MQ=60)
                      TATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGC                                                                         >  SRR4302540.5040951/1‑94 (MQ=60)
                       ATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGAGTGAAGATGCGATTTACCACTCCCCCTATACCGGGCGTCGGCC                                                                        >  SRR4302540.3612565/1‑94 (MQ=60)
                        TAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCA                                                                       <  SRR4302540.5851591/94‑1 (MQ=60)
                         AATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAG                                                                      >  SRR4302540.2410409/1‑94 (MQ=60)
                         AATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAG                                                                      >  SRR4302540.4742387/1‑94 (MQ=60)
                          ATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGCTTTAACACTCCACCTATACCGGCCGTCCGCCAGA                                                                     >  SRR4302540.2676450/1‑94 (MQ=60)
                          ATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGA                                                                     >  SRR4302540.7223653/1‑94 (MQ=60)
                          ATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGA                                                                     >  SRR4302540.606766/1‑94 (MQ=60)
                          ATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGA                                                                     >  SRR4302540.2676449/1‑94 (MQ=60)
                           TGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGAT                                                                    <  SRR4302540.10053667/94‑1 (MQ=60)
                           TGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGAT                                                                    >  SRR4302540.1331145/1‑94 (MQ=60)
                           AGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGAT                                                                    <  SRR4302540.4260517/94‑1 (MQ=60)
                            GAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATG                                                                   >  SRR4302540.4761727/1‑94 (MQ=60)
                            GAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACACAGCGTGAAGATGCGATTTACCACTCCACATATACCGGGCGTGCGCCAGATA                                                                   >  SRR4302540.2254716/1‑94 (MQ=60)
                             AAGTCGATAATTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGA                                                                  <  SRR4302540.6479250/94‑1 (MQ=60)
                              AGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAG                                                                 <  SRR4302540.6881627/94‑1 (MQ=60)
                              AGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAG                                                                 >  SRR4302540.4831314/1‑94 (MQ=60)
                              AGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAG                                                                 >  SRR4302540.3054923/1‑94 (MQ=60)
                                  GATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCG                                                             <  SRR4302540.2376872/94‑1 (MQ=60)
                                  GATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCG                                                             >  SRR4302540.4467298/1‑94 (MQ=60)
                                  GATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCG                                                             >  SRR4302540.4698249/1‑94 (MQ=60)
                                  GATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCG                                                             >  SRR4302540.1996193/1‑94 (MQ=60)
                                  GATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCG                                                             >  SRR4302540.362542/1‑94 (MQ=60)
                                   ATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGC                                                            >  SRR4302540.3788545/1‑94 (MQ=60)
                                    TAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCG                                                           <  SRR4302540.4017570/94‑1 (MQ=60)
                                      GTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGT                                                         >  SRR4302540.5246723/1‑94 (MQ=60)
                                      GTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGT                                                         >  SRR4302540.3272052/1‑94 (MQ=60)
                                      GTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGT                                                         <  SRR4302540.6441241/94‑1 (MQ=60)
                                      GTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGT                                                         <  SRR4302540.7978800/94‑1 (MQ=60)
                                      GTTGCCCGGTATTTAGCGTAACTGATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGT                                                         <  SRR4302540.303944/94‑1 (MQ=60)
                                       TTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTG                                                        <  SRR4302540.3359499/94‑1 (MQ=60)
                                       TTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTG                                                        >  SRR4302540.1796858/1‑94 (MQ=60)
                                       TGTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTG                                                        <  SRR4302540.9810901/94‑1 (MQ=60)
                                        TTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGC                                                       >  SRR4302540.511351/1‑94 (MQ=60)
                                         TCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCT                                                      >  SRR4302540.9530927/1‑94 (MQ=60)
                                         TCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCT                                                      >  SRR4302540.4644188/1‑94 (MQ=60)
                                         TCCAGGTATTTACCGTGACGCATATTCCCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCT                                                      <  SRR4302540.3287658/94‑1 (MQ=60)
                                          CCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTG                                                     >  SRR4302540.4264483/1‑94 (MQ=60)
                                           CCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGG                                                    >  SRR4302540.8403960/1‑94 (MQ=60)
                                            CGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGG                                                   <  SRR4302540.3586190/94‑1 (MQ=60)
                                            CGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGG                                                   >  SRR4302540.9506549/1‑94 (MQ=60)
                                             GGTATTTACCGTGCCGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGT                                                  <  SRR4302540.8150186/94‑1 (MQ=60)
                                             GGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGT                                                  <  SRR4302540.4250180/94‑1 (MQ=60)
                                             GGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGT                                                  >  SRR4302540.2122955/1‑94 (MQ=60)
                                             GGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGT                                                  <  SRR4302540.5056222/94‑1 (MQ=60)
                                             GGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGT                                                  >  SRR4302540.4696204/1‑94 (MQ=60)
                                              GTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTG                                                 >  SRR4302540.4186103/1‑94 (MQ=60)
                                              GTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTG                                                 >  SRR4302540.167616/1‑94 (MQ=60)
                                              GTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTG                                                 >  SRR4302540.1723692/1‑94 (MQ=60)
                                              GTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTG                                                 >  SRR4302540.976708/1‑94 (MQ=60)
                                              GTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTG                                                 >  SRR4302540.976709/1‑94 (MQ=60)
                                              GTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTG                                                 >  SRR4302540.1860570/1‑94 (MQ=60)
                                              GTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTG                                                 <  SRR4302540.8892162/94‑1 (MQ=60)
                                              GTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACAGGGCGTCCGCCAGATGAGCCCGCGGAGCTGGGTG                                                 >  SRR4302540.874193/1‑94 (MQ=60)
                                               TATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGT                                                >  SRR4302540.1741189/1‑94 (MQ=60)
                                                ATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTC                                               >  SRR4302540.362359/1‑94 (MQ=60)
                                                ATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTC                                               <  SRR4302540.6996767/94‑1 (MQ=60)
                                                ATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTC                                               <  SRR4302540.6996765/94‑1 (MQ=60)
                                                ATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTC                                               >  SRR4302540.8280842/1‑94 (MQ=60)
                                                ATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTC                                               >  SRR4302540.8412675/1‑94 (MQ=60)
                                                ATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTC                                               >  SRR4302540.1209236/1‑94 (MQ=60)
                                                ATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTC                                               >  SRR4302540.4492090/1‑94 (MQ=60)
                                                ATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGGGCTGGGTGTC                                               >  SRR4302540.6629153/1‑94 (MQ=60)
                                                    ACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCAC                                           >  SRR4302540.7205303/1‑94 (MQ=60)
                                                    ACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCAC                                           <  SRR4302540.6185720/94‑1 (MQ=60)
                                                      CGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTG                                         >  SRR4302540.2810404/1‑94 (MQ=60)
                                                      CGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTG                                         >  SRR4302540.2573103/1‑94 (MQ=60)
                                                       GTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGA                                        <  SRR4302540.653716/94‑1 (MQ=60)
                                                       GTGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGA                                        >  SRR4302540.8317883/1‑94 (MQ=60)
                                                        TGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAA                                       <  SRR4302540.8948056/94‑1 (MQ=60)
                                                        TGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAA                                       <  SRR4302540.6348824/94‑1 (MQ=60)
                                                        TGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAA                                       <  SRR4302540.6390280/94‑1 (MQ=60)
                                                        TGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAA                                       <  SRR4302540.5992169/94‑1 (MQ=60)
                                                        TGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAA                                       >  SRR4302540.8443111/1‑94 (MQ=60)
                                                        TGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAA                                       <  SRR4302540.1997914/94‑1 (MQ=60)
                                                        TGACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAA                                       <  SRR4302540.2868398/94‑1 (MQ=60)
                                                         GACGCATATTACCCAGCGTGAAGATGCGATTTACCGCTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAAC                                      <  SRR4302540.7421072/94‑1 (MQ=60)
                                                         GACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAAC                                      <  SRR4302540.3827516/94‑1 (MQ=60)
                                                          ACGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACG                                     >  SRR4302540.1556134/1‑94 (MQ=60)
                                                           CGCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGA                                    >  SRR4302540.6547136/1‑94 (MQ=60)
                                                            GCATATTACCCAGCGTGAAGATGCTATTCACCACCCCACCTATCCCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAA                                   <  SRR4302540.5023641/94‑1 (MQ=60)
                                                            GCATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAA                                   <  SRR4302540.3703254/94‑1 (MQ=60)
                                                              ATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGT                                 <  SRR4302540.1544983/94‑1 (MQ=60)
                                                              ATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGT                                 >  SRR4302540.3242637/1‑94 (MQ=60)
                                                              ATATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGG                                 >  SRR4302540.7811598/1‑94 (MQ=60)
                                                               TATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTG                                >  SRR4302540.6978852/1‑94 (MQ=60)
                                                                ATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGT                               >  SRR4302540.4598185/1‑94 (MQ=60)
                                                                ATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGT                               >  SRR4302540.669813/1‑94 (MQ=60)
                                                                ATTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCACGCGGTGCTGGGTGTCGCACTGAACGAAGTGT                               >  SRR4302540.4151681/1‑94 (MQ=60)
                                                                 TTACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTT                              >  SRR4302540.114348/1‑94 (MQ=60)
                                                                  TACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTT                             <  SRR4302540.5864202/94‑1 (MQ=60)
                                                                   TCCCAGCGTGAAGATGCGATGTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTG                            <  SRR4302540.7669076/94‑1 (MQ=60)
                                                                   ACCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTG                            >  SRR4302540.1602673/1‑94 (MQ=60)
                                                                    CCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGT                           <  SRR4302540.8085241/94‑1 (MQ=60)
                                                                    CCCAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGT                           >  SRR4302540.2749400/1‑94 (MQ=60)
                                                                      CAGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGC                         <  SRR4302540.4978241/94‑1 (MQ=60)
                                                                       AGCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCC                        <  SRR4302540.8091004/94‑1 (MQ=60)
                                                                        GCGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCG                       >  SRR4302540.8148906/1‑94 (MQ=60)
                                                                         CGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGA                      >  SRR4302540.8881558/1‑94 (MQ=60)
                                                                         CGTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGA                      <  SRR4302540.162685/94‑1 (MQ=60)
                                                                          GTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAT                     >  SRR4302540.5832962/1‑94 (MQ=60)
                                                                          GTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAT                     <  SRR4302540.9451554/94‑1 (MQ=60)
                                                                          GTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAT                     >  SRR4302540.8492288/1‑94 (MQ=60)
                                                                          GTGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGAT                     <  SRR4302540.1014528/94‑1 (MQ=60)
                                                                           TGAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATT                    <  SRR4302540.9485567/94‑1 (MQ=60)
                                                                            GAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTC                   >  SRR4302540.909979/1‑94 (MQ=60)
                                                                            GAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTC                   >  SRR4302540.10122116/1‑94 (MQ=60)
                                                                            GAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTC                   >  SRR4302540.7974484/1‑94 (MQ=60)
                                                                            GAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTC                   <  SRR4302540.278139/94‑1 (MQ=60)
                                                                            GAAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTC                   <  SRR4302540.3864635/94‑1 (MQ=60)
                                                                             AAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCT                  <  SRR4302540.1635854/94‑1 (MQ=60)
                                                                             AAGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCT                  >  SRR4302540.9433820/1‑94 (MQ=60)
                                                                              AGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGCTTCTG                 >  SRR4302540.156896/1‑94 (MQ=60)
                                                                              AGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTG                 >  SRR4302540.9936195/1‑94 (MQ=60)
                                                                              AGATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTG                 <  SRR4302540.200178/94‑1 (MQ=60)
                                                                               GATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGC                >  SRR4302540.3517563/1‑94 (MQ=60)
                                                                               GATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGC                >  SRR4302540.642698/1‑94 (MQ=60)
                                                                               GATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGC                >  SRR4302540.832261/1‑94 (MQ=60)
                                                                                ATTCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGCTGCTGGGTGTCGCACTGAACGAAGCGTTTGTGCCGATTCTGCA               >  SRR4302540.4376346/1‑94 (MQ=60)
                                                                                ATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCA               >  SRR4302540.3122979/1‑94 (MQ=60)
                                                                                ATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCA               <  SRR4302540.7215139/94‑1 (MQ=60)
                                                                                ATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCA               <  SRR4302540.9357519/94‑1 (MQ=60)
                                                                                ATGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCA               <  SRR4302540.2221420/94‑1 (MQ=60)
                                                                                 TGCGATTTACCACTCCCCCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAA              <  SRR4302540.5954961/94‑1 (MQ=60)
                                                                                 TGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAA              >  SRR4302540.366649/1‑94 (MQ=60)
                                                                                 TGCGATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAA              >  SRR4302540.4639014/1‑94 (MQ=60)
                                                                                    GATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAA           >  SRR4302540.4002762/1‑94 (MQ=60)
                                                                                    GATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAA           <  SRR4302540.6255029/94‑1 (MQ=60)
                                                                                     ATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAAC          <  SRR4302540.6242968/94‑1 (MQ=60)
                                                                                     ATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAAC          <  SRR4302540.9622981/94‑1 (MQ=60)
                                                                                     ATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAAC          >  SRR4302540.4015503/1‑94 (MQ=60)
                                                                                     ATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAAC          >  SRR4302540.8666481/1‑94 (MQ=60)
                                                                                     ATTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAAC          >  SRR4302540.8666480/1‑94 (MQ=60)
                                                                                      TTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCTCTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACA         <  SRR4302540.5187898/94‑1 (MQ=60)
                                                                                      TTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAACACA         >  SRR4302540.4505797/1‑94 (MQ=60)
                                                                                      TTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACA         >  SRR4302540.3713322/1‑94 (MQ=60)
                                                                                      TTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACA         <  SRR4302540.383636/94‑1 (MQ=60)
                                                                                      TTTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACA         <  SRR4302540.5134194/94‑1 (MQ=60)
                                                                                       TTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAG        >  SRR4302540.9785948/1‑94 (MQ=60)
                                                                                       TTACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAG        <  SRR4302540.5167831/94‑1 (MQ=60)
                                                                                         ACCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTT      <  SRR4302540.9930574/94‑1 (MQ=60)
                                                                                          CCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTC     <  SRR4302540.5241620/94‑1 (MQ=60)
                                                                                          CCACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTC     <  SRR4302540.108922/94‑1 (MQ=60)
                                                                                           CACTCCACCTATACCGGGCGTCCGCCAGATGAGCCGGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCC    <  SRR4302540.3506480/94‑1 (MQ=60)
                                                                                           CACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCC    >  SRR4302540.5223221/1‑94 (MQ=60)
                                                                                           CACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGCGTTTGTGCCGATTCTGCAAAAACAGTTCC    >  SRR4302540.9211146/1‑94 (MQ=60)
                                                                                            ACTCCCCCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCC   <  SRR4302540.289945/94‑1 (MQ=60)
                                                                                            ACTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCC   >  SRR4302540.5091658/1‑94 (MQ=60)
                                                                                             CTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCG  >  SRR4302540.4307292/1‑94 (MQ=60)
                                                                                             CTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCG  <  SRR4302540.1513174/94‑1 (MQ=60)
                                                                                             CTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCG  <  SRR4302540.4683562/94‑1 (MQ=60)
                                                                                             CTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCG  >  SRR4302540.6900698/1‑94 (MQ=60)
                                                                                             CTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCG  >  SRR4302540.4145255/1‑94 (MQ=60)
                                                                                             |                                                                                             
GTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCG  >  NC_000913/4023438‑4023624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑