Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,041,927	A→G	Y50C (TAC→TGC)	b3861 →	putative GTP‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,041,927	0	A	G	99.8%	1767.8 / ‑5.8	538	Y50C (TAC→TGC)	b3861	putative GTP‑binding protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (335/201); total (336/202)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 544 total aligned reads displayed.

GCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCG  >  NC_000913/4041837‑4042016

gCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCg                                                                                         >  1:360835/1‑93 (MQ=255)

   caTGGTACACAGGTACGCAAATTCAGCCTGGTGTCGCATAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGata                                                                                      <  2:8951815/93‑1 (MQ=255)

   caTGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGata                                                                                      <  2:3163209/93‑1 (MQ=255)

    aTGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGatat                                                                                     >  2:8552875/1‑93 (MQ=255)

     tGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATg                                                                                    >  1:4524615/1‑93 (MQ=255)

      ggTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTATAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGa                                                                                   <  1:9604330/93‑1 (MQ=255)

      ggTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGa                                                                                   <  2:910955/93‑1 (MQ=255)

      ggTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGa                                                                                   <  2:9203012/93‑1 (MQ=255)

        tACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACg                                                                                 >  2:1801940/1‑93 (MQ=255)

         acacAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGt                                                                                >  2:3796320/1‑93 (MQ=255)

           acaGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTa                                                                              >  1:9419566/1‑93 (MQ=255)

           acaGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTa                                                                              >  1:990638/1‑93 (MQ=255)

           acaGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTa                                                                              >  2:8231493/1‑93 (MQ=255)

            caGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTaa                                                                             <  1:7379101/93‑1 (MQ=255)

            caGGAACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAACAAGAAAGGTGACCATGCCGGCGATATACCGTTag                                                                             >  2:8392118/1‑92 (MQ=255)

                 aCGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTAt                                                                        >  2:7526627/1‑93 (MQ=255)

                  cGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATc                                                                       >  1:6840702/1‑93 (MQ=255)

                  cGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAAAATGCCTGCGATATGACGTTAAGTTATc                                                                       <  2:9452820/93‑1 (MQ=255)

                     aaaTTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCaaa                                                                    >  2:7018493/1‑93 (MQ=255)

                     aaaTTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCaaa                                                                    >  2:4600020/1‑93 (MQ=255)

                      aaTTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCaaaa                                                                   <  2:1470098/93‑1 (MQ=255)

                      aaTTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCaaaa                                                                   >  2:9183487/1‑93 (MQ=255)

                      aaTTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCaaaa                                                                   >  1:6619572/1‑93 (MQ=255)

                       aTTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAAt                                                                  <  2:8042522/93‑1 (MQ=255)

                       aTTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAAt                                                                  <  1:5918311/93‑1 (MQ=255)

                            gCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGa                                                             <  1:3064481/93‑1 (MQ=255)

                              cTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACa                                                           >  2:6536525/1‑93 (MQ=255)

                               tGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACaa                                                          >  1:7503811/1‑93 (MQ=255)

                               tGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACaa                                                          >  2:1369775/1‑93 (MQ=255)

                               tGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACaa                                                          >  2:5594968/1‑93 (MQ=255)

                               aggTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACaa                                                          <  2:7245664/92‑1 (MQ=255)

                                ggTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACaaa                                                         <  1:4637739/93‑1 (MQ=255)

                                ggTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACaaa                                                         >  2:6150401/1‑93 (MQ=255)

                                 gtgtCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAg                                                        <  1:5408433/93‑1 (MQ=255)

                                 gtgtCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAg                                                        >  2:6888784/1‑93 (MQ=255)

                                 gtgtCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAg                                                        <  1:8163431/93‑1 (MQ=255)

                                  tgtCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAgg                                                       >  1:9126339/1‑93 (MQ=255)

                                    tCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCt                                                     >  2:6691103/1‑93 (MQ=255)

                                    tCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCt                                                     >  2:1990465/1‑93 (MQ=255)

                                     cGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCtt                                                    >  1:1236194/1‑93 (MQ=255)

                                      gAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCttt                                                   <  2:958978/93‑1 (MQ=255)

                                        aaaaTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCttttt                                                 >  2:787304/1‑93 (MQ=255)

                                         aaaTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCtttttt                                                <  2:5288113/93‑1 (MQ=255)

                                         aaaTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCtttttt                                                >  2:7145936/1‑93 (MQ=255)

                                         aaaTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCtttttt                                                <  1:8627075/93‑1 (MQ=255)

                                         aaaTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCtttttt                                                >  1:3908783/1‑93 (MQ=255)

                                         aaaTTTATAAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCtttttt                                                >  1:7654433/1‑93 (MQ=255)

                                           aTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTaa                                              >  2:4104793/1‑93 (MQ=255)

                                            tttATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAAt                                             >  2:4484044/1‑93 (MQ=255)

                                              tattaAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTc                                           >  2:1074942/1‑93 (MQ=255)

                                              tattaAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTc                                           >  1:4762389/1‑93 (MQ=255)

                                              tattaAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTc                                           <  2:5856741/93‑1 (MQ=255)

                                                 taAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCg                                        <  2:8748444/93‑1 (MQ=255)

                                                 taAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGCTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCg                                        >  1:3246785/1‑93 (MQ=255)

                                                  aaaGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGt                                       <  1:1124199/93‑1 (MQ=255)

                                                       ttttAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTca                                  <  1:7814014/93‑1 (MQ=255)

                                                       ttttAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTca                                  >  1:5601249/1‑93 (MQ=255)

                                                       ttttAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTca                                  <  1:4873968/93‑1 (MQ=255)

                                                       ttttAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTca                                  >  1:3415592/1‑93 (MQ=255)

                                                          tAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaat                               >  1:2364371/1‑93 (MQ=255)

                                                           aaCGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatg                              >  1:2207837/1‑93 (MQ=255)

                                                            aCGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgc                             <  1:9269396/93‑1 (MQ=255)

                                                              gATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaa                           >  2:3012981/1‑93 (MQ=255)

                                                              gATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaa                           <  1:2641/93‑1 (MQ=255)

                                                              gATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaa                           <  2:5393450/93‑1 (MQ=255)

                                                               aTGCTAAAAAGAAAGGTGAATATGCCTTCGATATGACGTTAAGTTATCAAAATGTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaaa                          <  1:1699800/93‑1 (MQ=255)

                                                               aTGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaaa                          <  1:1941564/93‑1 (MQ=255)

                                                                tGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaaat                         <  1:882894/93‑1 (MQ=255)

                                                                tGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaaat                         >  1:7013241/1‑93 (MQ=255)

                                                                tGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaaat                         >  2:9709796/1‑93 (MQ=255)

                                                                 gCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTcaaatgcaaatg                        >  2:99430/1‑93 (MQ=255)

                                                                  cTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGa                       <  1:6104425/93‑1 (MQ=255)

                                                                    aaaaaGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACa                     >  1:10032281/1‑93 (MQ=255)

                                                                    aaaaaGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACa                     >  2:9611589/1‑93 (MQ=255)

                                                                    aaaaaGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACa                     <  1:1492796/93‑1 (MQ=255)

                                                                    aaaaaGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACa                     >  2:6392000/1‑93 (MQ=255)

                                                                    aaaaaGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACa                     <  2:4387914/93‑1 (MQ=255)

                                                                    aaaaaGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACa                     <  1:2813182/93‑1 (MQ=255)

                                                                    aaaaaGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACa                     >  2:228444/1‑93 (MQ=255)

                                                                      aaagaaagGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACAtt                   <  2:2194791/93‑1 (MQ=255)

                                                                         gaaagGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCgt                >  2:3257664/1‑92 (MQ=255)

                                                                          aaagGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGAt               <  2:4878856/93‑1 (MQ=255)

                                                                           aagGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATa              >  2:1725159/1‑93 (MQ=255)

                                                                            agGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATaa             <  1:5156867/93‑1 (MQ=255)

                                                                            agGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGCTTTCAAATGCAAATGACATTCGATaa             >  2:6293330/1‑93 (MQ=255)

                                                                             ggTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAAc            <  1:6471715/93‑1 (MQ=255)

                                                                               tGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACgg          <  1:4231398/93‑1 (MQ=255)

                                                                               tGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACgg          >  2:2866880/1‑93 (MQ=255)

                                                                                gAACATGCCTGCGATATGACGTTAAGTTATCAAGATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGt         <  1:9727064/93‑1 (MQ=255)

                                                                                gAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGt         <  2:5134861/93‑1 (MQ=255)

                                                                                gAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGt         <  1:230573/93‑1 (MQ=255)

                                                                                gAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGt         >  2:7619744/1‑93 (MQ=255)

                                                                                 aaCATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTg        >  2:3923075/1‑93 (MQ=255)

                                                                                   cATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCa      >  2:9334307/1‑93 (MQ=255)

                                                                                   cATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCa      >  1:1346568/1‑93 (MQ=255)

                                                                                     tGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCAcc    <  1:7288007/93‑1 (MQ=255)

                                                                                     tGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCAcc    <  1:8459619/93‑1 (MQ=255)

                                                                                     tGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCAcc    >  2:4687185/1‑93 (MQ=255)

                                                                                      gCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCAccc   >  2:2553070/1‑93 (MQ=255)

                                                                                       ccTACGATATGACGTTAAGTTATCAACATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCACATGCAAATGACATTCGATAACGGTGCACCCg  >  1:401143/1‑93 (MQ=255)

GCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCG  >  NC_000913/4041837‑4042016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 266 total aligned reads displayed.

GTGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCT  >  NC_000913/4041834‑4042020

GTGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTG                                                                                               >  SRR4302540.4297491/1‑94 (MQ=60)

GTGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTG                                                                                               >  SRR4302540.8068860/1‑94 (MQ=60)

GTGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTG                                                                                               >  SRR4302540.9309843/1‑94 (MQ=60)

 TGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGC                                                                                              <  SRR4302540.9326646/94‑1 (MQ=60)

  GGCAGATGGTACACAGGGACACAAATTCAGCCTTTTGTCGAAAAATTTATTAAAGATTATAACGAGGCTAAAAAGAAAGGTGAACATGCCTGCG                                                                                             <  SRR4302540.3969766/94‑1 (MQ=60)

  GGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCG                                                                                             >  SRR4302540.364543/1‑94 (MQ=60)

    CACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGAT                                                                                           <  SRR4302540.6841724/94‑1 (MQ=60)

    CACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGAT                                                                                           >  SRR4302540.5745520/1‑94 (MQ=60)

     ACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATA                                                                                          >  SRR4302540.8916071/1‑94 (MQ=60)

      CATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATAT                                                                                         <  SRR4302540.3300117/94‑1 (MQ=60)

       ATGGTGCACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTGTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATG                                                                                        <  SRR4302540.1409116/94‑1 (MQ=60)

       ATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATG                                                                                        >  SRR4302540.3836238/1‑94 (MQ=60)

       ATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATG                                                                                        >  SRR4302540.4573612/1‑94 (MQ=60)

         GGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTATAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGAC                                                                                      <  SRR4302540.9717607/94‑1 (MQ=60)

         GGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGAC                                                                                      <  SRR4302540.4010652/94‑1 (MQ=60)

          GTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACG                                                                                     <  SRR4302540.9198686/94‑1 (MQ=60)

            ACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTT                                                                                   >  SRR4302540.4332092/1‑94 (MQ=60)

             CACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTA                                                                                  >  SRR4302540.1000747/1‑94 (MQ=60)

             CACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTA                                                                                  >  SRR4302540.8024351/1‑94 (MQ=60)

              ACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAA                                                                                 >  SRR4302540.9364261/1‑94 (MQ=60)

              ACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAA                                                                                 >  SRR4302540.1959247/1‑94 (MQ=60)

               CAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAG                                                                                >  SRR4302540.4953419/1‑94 (MQ=60)

               CAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAG                                                                                <  SRR4302540.5168608/94‑1 (MQ=60)

               CAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAG                                                                                >  SRR4302540.5407513/1‑94 (MQ=60)

               CAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAG                                                                                <  SRR4302540.7461330/94‑1 (MQ=60)

                AGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGT                                                                               <  SRR4302540.2786612/94‑1 (MQ=60)

                 GGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACACGCCTGCGATATGACGTTAAGTT                                                                              >  SRR4302540.7741585/1‑94 (MQ=60)

                  GTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTA                                                                             <  SRR4302540.8621229/94‑1 (MQ=60)

                   TACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTAT                                                                            >  SRR4302540.7227006/1‑94 (MQ=60)

                    ACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATC                                                                           >  SRR4302540.6916472/1‑94 (MQ=60)

                    ACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATC                                                                           >  SRR4302540.6916473/1‑94 (MQ=60)

                    ACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATA                                                                           >  SRR4302540.3385920/1‑94 (MQ=60)

                     CGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCA                                                                          <  SRR4302540.770832/94‑1 (MQ=60)

                     CGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGGGAACATGCCTATGATATGACGGTAAGCTATCA                                                                          >  SRR4302540.9804343/1‑94 (MQ=60)

                        AAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAA                                                                       >  SRR4302540.6692869/1‑94 (MQ=60)

                        AAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAA                                                                       >  SRR4302540.6268426/1‑94 (MQ=60)

                         AATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAAT                                                                      <  SRR4302540.3280893/94‑1 (MQ=60)

                         AATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAAT                                                                      >  SRR4302540.4840841/1‑94 (MQ=60)

                         AATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAAT                                                                      <  SRR4302540.9425299/94‑1 (MQ=60)

                          ATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATT                                                                     <  SRR4302540.5983688/94‑1 (MQ=60)

                             CAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTG                                                                  <  SRR4302540.10163781/94‑1 (MQ=60)

                             CAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTG                                                                  >  SRR4302540.6086919/1‑94 (MQ=60)

                              AGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGA                                                                 <  SRR4302540.4642467/94‑1 (MQ=60)

                              AGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGA                                                                 <  SRR4302540.2316826/94‑1 (MQ=60)

                               GCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGAC                                                                >  SRR4302540.2593124/1‑94 (MQ=60)

                               GCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGAC                                                                <  SRR4302540.3098105/94‑1 (MQ=60)

                                CCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACA                                                               >  SRR4302540.7484503/1‑94 (MQ=60)

                                CCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACA                                                               >  SRR4302540.1448794/1‑94 (MQ=60)

                                CCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACA                                                               >  SRR4302540.1448793/1‑94 (MQ=60)

                                CCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACA                                                               >  SRR4302540.2176036/1‑94 (MQ=60)

                                 CTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAA                                                              >  SRR4302540.7587673/1‑94 (MQ=60)

                                 CTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAA                                                              >  SRR4302540.9959221/1‑94 (MQ=60)

                                 CTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAA                                                              >  SRR4302540.3999829/1‑94 (MQ=60)

                                 CTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAA                                                              >  SRR4302540.4077403/1‑94 (MQ=60)

                                 CTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAA                                                              >  SRR4302540.5237176/1‑94 (MQ=60)

                                   GGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAG                                                            <  SRR4302540.4687392/94‑1 (MQ=60)

                                   GGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAG                                                            >  SRR4302540.2994094/1‑94 (MQ=60)

                                   GGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAG                                                            >  SRR4302540.9579175/1‑94 (MQ=60)

                                   GGTGTCGAAAAATTTATTAAAGAATTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAG                                                            >  SRR4302540.1057874/1‑94 (MQ=60)

                                    GTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGG                                                           <  SRR4302540.5467904/94‑1 (MQ=60)

                                    GTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGG                                                           <  SRR4302540.8258228/94‑1 (MQ=60)

                                    GTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGG                                                           >  SRR4302540.8800847/1‑94 (MQ=60)

                                    GTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGG                                                           >  SRR4302540.9366262/1‑94 (MQ=60)

                                     TGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGC                                                          >  SRR4302540.6559055/1‑94 (MQ=60)

                                     TGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGC                                                          <  SRR4302540.277017/94‑1 (MQ=60)

                                      GTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCT                                                         >  SRR4302540.6738772/1‑94 (MQ=60)

                                      GTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCT                                                         >  SRR4302540.1540893/1‑94 (MQ=60)

                                      GTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCT                                                         >  SRR4302540.536255/1‑94 (MQ=60)

                                        CGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTT                                                       <  SRR4302540.4880150/94‑1 (MQ=60)

                                        CGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTT                                                       <  SRR4302540.3544654/94‑1 (MQ=60)

                                        CGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTT                                                       >  SRR4302540.9174908/1‑94 (MQ=60)

                                         GAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTT                                                      >  SRR4302540.5160225/1‑94 (MQ=60)

                                         GAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTT                                                      >  SRR4302540.3589465/1‑94 (MQ=60)

                                         GAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTT                                                      >  SRR4302540.1262942/1‑94 (MQ=60)

                                          AAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTT                                                     <  SRR4302540.2279518/94‑1 (MQ=60)

                                           AAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTT                                                    >  SRR4302540.3951151/1‑94 (MQ=60)

                                           AAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTT                                                    <  SRR4302540.1179569/94‑1 (MQ=60)

                                            AAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTA                                                   >  SRR4302540.3896847/1‑94 (MQ=60)

                                            AAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTA                                                   <  SRR4302540.8727286/94‑1 (MQ=60)

                                             AATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAA                                                  <  SRR4302540.5564456/94‑1 (MQ=60)

                                             AATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAA                                                  >  SRR4302540.5838740/1‑94 (MQ=60)

                                             AATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAA                                                  >  SRR4302540.7415202/1‑94 (MQ=60)

                                              ATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAAT                                                 >  SRR4302540.8240152/1‑94 (MQ=60)

                                              ATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAAT                                                 >  SRR4302540.8647279/1‑94 (MQ=60)

                                               TTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATT                                                >  SRR4302540.2335513/1‑94 (MQ=60)

                                               TTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATT                                                >  SRR4302540.9938611/1‑94 (MQ=60)

                                               TTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATT                                                >  SRR4302540.8965404/1‑94 (MQ=60)

                                               TTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATT                                                >  SRR4302540.2653231/1‑94 (MQ=60)

                                                TTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTC                                               >  SRR4302540.1985195/1‑94 (MQ=60)

                                                 TATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCC                                              >  SRR4302540.8441399/1‑94 (MQ=60)

                                                 TATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCC                                              <  SRR4302540.9548085/94‑1 (MQ=60)

                                                  ATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCG                                             >  SRR4302540.2444934/1‑94 (MQ=60)

                                                  ATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCC                                             >  SRR4302540.7548229/1‑94 (MQ=60)

                                                  ATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCC                                             >  SRR4302540.7619826/1‑94 (MQ=60)

                                                   TTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCG                                            >  SRR4302540.3282138/1‑94 (MQ=60)

                                                     AAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTT                                          <  SRR4302540.1135889/94‑1 (MQ=60)

                                                     AAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTT                                          <  SRR4302540.7032680/94‑1 (MQ=60)

                                                      AAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTT                                         >  SRR4302540.3079873/1‑94 (MQ=60)

                                                      AAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTT                                         <  SRR4302540.9730277/94‑1 (MQ=60)

                                                      AAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTT                                         >  SRR4302540.729446/1‑94 (MQ=60)

                                                       AGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTT                                        >  SRR4302540.6008971/1‑94 (MQ=60)

                                                       AGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTGTAATTCACGTTTT                                        >  SRR4302540.1626230/1‑94 (MQ=60)

                                                        GATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTC                                       >  SRR4302540.4671793/1‑94 (MQ=60)

                                                         ATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCA                                      >  SRR4302540.981276/1‑94 (MQ=60)

                                                         ATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCA                                      >  SRR4302540.3452766/1‑94 (MQ=60)

                                                         ATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCA                                      >  SRR4302540.1651909/1‑94 (MQ=60)

                                                         ATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCA                                      >  SRR4302540.120577/1‑94 (MQ=60)

                                                         ATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCA                                      >  SRR4302540.5699000/1‑94 (MQ=60)

                                                         ATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCA                                      >  SRR4302540.5662878/1‑94 (MQ=60)

                                                          TTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAA                                     <  SRR4302540.7905329/94‑1 (MQ=60)

                                                          TTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAA                                     >  SRR4302540.3653585/1‑94 (MQ=60)

                                                          TTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAA                                     >  SRR4302540.2689826/1‑94 (MQ=60)

                                                          TTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAA                                     <  SRR4302540.4926266/94‑1 (MQ=60)

                                                          TTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAA                                     <  SRR4302540.7905330/94‑1 (MQ=60)

                                                           TTTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAA                                    >  SRR4302540.8137190/1‑94 (MQ=60)

                                                            TTAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAAT                                   >  SRR4302540.2389833/1‑94 (MQ=60)

                                                             TAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATG                                  >  SRR4302540.2231683/1‑94 (MQ=60)

                                                             TAACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATG                                  >  SRR4302540.8751799/1‑94 (MQ=60)

                                                              AACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGC                                 >  SRR4302540.7268110/1‑94 (MQ=60)

                                                              AACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGC                                 <  SRR4302540.4201565/94‑1 (MQ=60)

                                                               ACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCA                                >  SRR4302540.1250442/1‑94 (MQ=60)

                                                               ACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCA                                <  SRR4302540.9380244/94‑1 (MQ=60)

                                                               ACGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCA                                >  SRR4302540.6830274/1‑94 (MQ=60)

                                                                CGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAA                               >  SRR4302540.9324664/1‑94 (MQ=60)

                                                                CGATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAA                               >  SRR4302540.1344823/1‑94 (MQ=60)

                                                                 GATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAA                              >  SRR4302540.9223001/1‑94 (MQ=60)

                                                                 GATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAA                              <  SRR4302540.2667/94‑1 (MQ=60)

                                                                  ATGCTAAAAAGAAAGGTGAATATGCCTTCGATATGACGTTAAGTTATCAAAATGTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAAT                             <  SRR4302540.1718208/94‑1 (MQ=60)

                                                                  ATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAAT                             <  SRR4302540.1962706/94‑1 (MQ=60)

                                                                  ATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAAT                             >  SRR4302540.7388518/1‑94 (MQ=60)

                                                                  ATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAAT                             <  SRR4302540.5584644/94‑1 (MQ=60)

                                                                  ATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAAT                             >  SRR4302540.9414756/1‑94 (MQ=60)

                                                                  ATGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAAT                             >  SRR4302540.7091106/1‑94 (MQ=60)

                                                                   TGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATG                            >  SRR4302540.6592921/1‑94 (MQ=60)

                                                                   TGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATG                            <  SRR4302540.4410220/94‑1 (MQ=60)

                                                                   TGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATG                            >  SRR4302540.7370836/1‑94 (MQ=60)

                                                                   TGCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATG                            <  SRR4302540.892259/94‑1 (MQ=60)

                                                                    GCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGA                           <  SRR4302540.813685/94‑1 (MQ=60)

                                                                    GCTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGA                           >  SRR4302540.8633370/1‑94 (MQ=60)

                                                                     CTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGAC                          <  SRR4302540.6172400/94‑1 (MQ=60)

                                                                     CTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGAC                          <  SRR4302540.776669/94‑1 (MQ=60)

                                                                     CTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGAC                          >  SRR4302540.4125737/1‑94 (MQ=60)

                                                                     CTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGAC                          >  SRR4302540.1227496/1‑94 (MQ=60)

                                                                     CTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGAC                          <  SRR4302540.6951653/94‑1 (MQ=60)

                                                                     CTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGAC                          <  SRR4302540.6337665/94‑1 (MQ=60)

                                                                     CTAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGAC                          >  SRR4302540.5573785/1‑94 (MQ=60)

                                                                      TAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACA                         >  SRR4302540.9502711/1‑94 (MQ=60)

                                                                      TAAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACA                         >  SRR4302540.10148976/1‑94 (MQ=60)

                                                                       AAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACAT                        <  SRR4302540.2843562/94‑1 (MQ=60)

                                                                       AAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACAT                        <  SRR4302540.2843563/94‑1 (MQ=60)

                                                                       AAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACAT                        <  SRR4302540.4617260/94‑1 (MQ=60)

                                                                       AAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACAT                        >  SRR4302540.1288960/1‑94 (MQ=60)

                                                                       AAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACAT                        <  SRR4302540.1509220/94‑1 (MQ=60)

                                                                       AAAAAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACAT                        >  SRR4302540.1525924/1‑94 (MQ=60)

                                                                          AAGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCG                     >  SRR4302540.4402271/1‑94 (MQ=60)

                                                                           AGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGA                    >  SRR4302540.2176471/1‑94 (MQ=60)

                                                                           AGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGA                    >  SRR4302540.2364308/1‑94 (MQ=60)

                                                                           AGAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGA                    <  SRR4302540.7291552/94‑1 (MQ=60)

                                                                            GAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGAT                   <  SRR4302540.3350585/94‑1 (MQ=60)

                                                                            AAAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGAT                   <  SRR4302540.6273602/94‑1 (MQ=60)

                                                                             AAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCTAATGACATTCGATA                  >  SRR4302540.7528195/1‑94 (MQ=60)

                                                                             AAAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATA                  >  SRR4302540.5000301/1‑94 (MQ=60)

                                                                              AAGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAA                 >  SRR4302540.8303780/1‑94 (MQ=60)

                                                                               AGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAGC                >  SRR4302540.9593946/1‑94 (MQ=60)

                                                                               AGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAAC                >  SRR4302540.6605953/1‑94 (MQ=60)

                                                                               AGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAAC                <  SRR4302540.5212865/94‑1 (MQ=60)

                                                                               AGGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAAC                <  SRR4302540.3182200/94‑1 (MQ=60)

                                                                               AGGTGAACATGCCTGCGATATGACGTTAAGCTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAAC                >  SRR4302540.10078536/1‑94 (MQ=60)

                                                                                GGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACG               >  SRR4302540.1068503/1‑94 (MQ=60)

                                                                                GGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACG               <  SRR4302540.6543722/94‑1 (MQ=60)

                                                                                AGTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACG               <  SRR4302540.9656389/94‑1 (MQ=60)

                                                                                 GTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGG              >  SRR4302540.4860720/1‑94 (MQ=60)

                                                                                 GTGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTGTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGG              >  SRR4302540.7812484/1‑94 (MQ=60)

                                                                                  TGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGT             <  SRR4302540.6166370/94‑1 (MQ=60)

                                                                                  TGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGT             >  SRR4302540.2270035/1‑94 (MQ=60)

                                                                                  TGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGT             <  SRR4302540.4277457/94‑1 (MQ=60)

                                                                                  TGAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGG             >  SRR4302540.997598/1‑94 (MQ=60)

                                                                                   GAACATGCCTGCGATATGACGTTAAGTTATCAAGATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTG            <  SRR4302540.9841303/94‑1 (MQ=60)

                                                                                   GAACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTG            <  SRR4302540.2350596/94‑1 (MQ=60)

                                                                                    AACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGC           >  SRR4302540.8414490/1‑94 (MQ=60)

                                                                                     ACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCA          <  SRR4302540.1257620/94‑1 (MQ=60)

                                                                                     ACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCA          >  SRR4302540.1360712/1‑94 (MQ=60)

                                                                                     ACATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCA          <  SRR4302540.1928460/94‑1 (MQ=60)

                                                                                      CATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATATCGGTGCAC         >  SRR4302540.4812203/1‑94 (MQ=60)

                                                                                      CATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGTAC         >  SRR4302540.4812202/1‑94 (MQ=60)

                                                                                       ATGCCTGCGATATGACGTTGAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACC        >  SRR4302540.3045171/1‑94 (MQ=60)

                                                                                       ATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTTGATAACGGTGCACC        >  SRR4302540.7701035/1‑94 (MQ=60)

                                                                                       ATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACC        >  SRR4302540.7701034/1‑94 (MQ=60)

                                                                                       ATGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACC        <  SRR4302540.3337213/94‑1 (MQ=60)

                                                                                        TGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCC       <  SRR4302540.8557839/94‑1 (MQ=60)

                                                                                        TGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCC       <  SRR4302540.471543/94‑1 (MQ=60)

                                                                                        TGCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCC       <  SRR4302540.3944038/94‑1 (MQ=60)

                                                                                         GCCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCG      >  SRR4302540.1992477/1‑94 (MQ=60)

                                                                                         GCCTACGATATGACGTTAAGTTATCAACATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCACATGCAAATGACATTCGATAACGGTGCACCCG      >  SRR4302540.405329/1‑94 (MQ=60)

                                                                                          CCTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGA     <  SRR4302540.4793760/94‑1 (MQ=60)

                                                                                           CTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGAT    >  SRR4302540.2448009/1‑94 (MQ=60)

                                                                                           CTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGAT    >  SRR4302540.3567489/1‑94 (MQ=60)

                                                                                           CTGCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACCGTGCACCCGAT    >  SRR4302540.3483748/1‑94 (MQ=60)

                                                                                             GCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCT  <  SRR4302540.6884439/94‑1 (MQ=60)

                                                                                             GCGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCT  <  SRR4302540.1838016/94‑1 (MQ=60)

GTGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCT  >  NC_000913/4041834‑4042020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`