Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,067,548 T→C H137R (CAC→CGC)  b3879 ← putative aldose‑1‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,067,5480TC100.0% 1346.7 / NA 419H137R (CAC→CGC) b3879putative aldose‑1‑epimerase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (179/240);  total (179/240)

Only 100 of 467 total aligned reads displayed.

TTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGTGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTG  >  NC_000913/4067458‑4067637
                                                                                          |                                                                                         
ttGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCgtgcgt                                                                                         <  2:5210474/93‑1 (MQ=255)
 tGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCcgtgcgtg                                                                                        <  1:2183893/93‑1 (MQ=255)
    aGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTgcgtgcgt                                                                                     >  2:2659154/1‑93 (MQ=255)
     ggTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGtt                                                                                    >  2:7191828/1‑93 (MQ=255)
      gTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTg                                                                                   >  2:5769713/1‑93 (MQ=255)
      gTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTg                                                                                   <  2:1485865/93‑1 (MQ=255)
      gTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTg                                                                                   >  2:2586351/1‑93 (MQ=255)
        tAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAg                                                                                 >  1:8123176/1‑93 (MQ=255)
        tAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAg                                                                                 >  1:2075330/1‑93 (MQ=255)
           aTAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGa                                                                              <  1:6932757/93‑1 (MQ=255)
           aTAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGa                                                                              >  1:4759813/1‑93 (MQ=255)
            tAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGaa                                                                             >  2:7000751/1‑93 (MQ=255)
              aGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATa                                                                           <  1:2560744/93‑1 (MQ=255)
              aGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATa                                                                           <  2:2864149/93‑1 (MQ=255)
              aGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATa                                                                           >  1:5052590/1‑93 (MQ=255)
               ggATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATaa                                                                          <  1:1471180/93‑1 (MQ=255)
                gATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATaaa                                                                         >  2:8910592/1‑93 (MQ=255)
                 aTGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAaac                                                                        <  2:2220210/93‑1 (MQ=255)
                 aTGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAaac                                                                        <  1:3983834/93‑1 (MQ=255)
                  tGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAaaca                                                                       >  1:7982836/1‑93 (MQ=255)
                     aTACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACt                                                                    <  2:4481183/93‑1 (MQ=255)
                       aCCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTtg                                                                  <  1:5553556/93‑1 (MQ=255)
                        cccACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTtgt                                                                 <  2:4600469/93‑1 (MQ=255)
                          cACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTTCGTTGAGCGAATAAACAACTTGTGa                                                               >  2:7972879/1‑93 (MQ=255)
                          cACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGa                                                               <  1:10035914/93‑1 (MQ=255)
                          cACGACATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGa                                                               <  1:3275090/93‑1 (MQ=255)
                           aCGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGaa                                                              <  1:6689353/93‑1 (MQ=255)
                           aCGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGaa                                                              >  2:9579580/1‑93 (MQ=255)
                           aCGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGaa                                                              <  2:8472587/93‑1 (MQ=255)
                            cGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAg                                                             >  1:8068744/1‑93 (MQ=255)
                             gCCATAAGGCGCTGCGACAGTTCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGc                                                            <  2:4198362/93‑1 (MQ=255)
                             gCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGc                                                            >  1:7102531/1‑93 (MQ=255)
                             gCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGc                                                            >  2:3856531/1‑93 (MQ=255)
                             gCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCATTGAGCGAATAAACAACTTGTGAAGc                                                            >  2:4881182/1‑93 (MQ=255)
                              ccATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGcc                                                           >  2:6920063/1‑93 (MQ=255)
                                 tAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGc                                                        >  2:5346620/1‑93 (MQ=255)
                                 tAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGc                                                        >  1:5223988/1‑93 (MQ=255)
                                 tAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGc                                                        >  1:8508949/1‑93 (MQ=255)
                                 tAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGGGAAGCCAGc                                                        >  2:8706321/1‑93 (MQ=255)
                                 tAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAAAAAACAACTTGTGAAGCCAGc                                                        >  2:7805453/1‑93 (MQ=255)
                                  aaGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCa                                                       >  2:2326169/1‑93 (MQ=255)
                                  aaGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCa                                                       <  1:8770669/93‑1 (MQ=255)
                                   aGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCAt                                                      >  1:3784652/1‑93 (MQ=255)
                                   aGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCAt                                                      <  2:6490829/93‑1 (MQ=255)
                                    ggCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATa                                                     >  2:6393936/1‑93 (MQ=255)
                                    ggCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATa                                                     >  1:7762396/1‑93 (MQ=255)
                                    ggCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATa                                                     >  1:2410565/1‑93 (MQ=255)
                                     gcgcTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATaa                                                    <  1:338758/93‑1 (MQ=255)
                                      cgcTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATaaa                                                   <  1:6341485/93‑1 (MQ=255)
                                      cgcTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATaaa                                                   <  1:970762/93‑1 (MQ=255)
                                       ggtGCGACAGTGACGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAc                                                  <  2:8056380/91‑1 (MQ=255)
                                       gcTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATaaag                                                  >  1:7900935/1‑92 (MQ=255)
                                        cTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGCAAAACCCGCGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACg                                                 >  2:3065486/1‑93 (MQ=255)
                                        cTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACg                                                 >  2:3379668/1‑93 (MQ=255)
                                         tGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACgg                                                >  2:7333028/1‑93 (MQ=255)
                                         tGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACgg                                                <  2:8587264/93‑1 (MQ=255)
                                           cGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGAt                                              <  1:3002409/93‑1 (MQ=255)
                                              cAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGc                                           >  1:2852854/1‑93 (MQ=255)
                                               aGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGCGCGAATAAACAACTTGTGAAGCACGCATAAACGAATaaca                                          >  1:2312880/1‑90 (MQ=255)
                                                gTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCg                                         >  2:7761652/1‑93 (MQ=255)
                                                gTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCg                                         >  2:6770486/1‑93 (MQ=255)
                                                 tGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGt                                        >  1:9507105/1‑93 (MQ=255)
                                                  gCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTa                                       >  1:3558086/1‑93 (MQ=255)
                                                   ccGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTaa                                      <  2:200260/93‑1 (MQ=255)
                                                   ccGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTaa                                      <  1:1181463/93‑1 (MQ=255)
                                                    cGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAAc                                     <  2:108999/93‑1 (MQ=255)
                                                    cGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAAc                                     <  1:4520232/93‑1 (MQ=255)
                                                     gATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACt                                    >  1:830763/1‑93 (MQ=255)
                                                       tatTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTgg                                  <  1:6573325/93‑1 (MQ=255)
                                                        atTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTggg                                 <  2:6144579/93‑1 (MQ=255)
                                                        atTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTggg                                 <  1:7327086/93‑1 (MQ=255)
                                                         ttCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTCACTgggg                                >  1:5736813/1‑92 (MQ=255)
                                                         ttCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGggc                                <  1:2630254/93‑1 (MQ=255)
                                                         ttCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGggc                                <  1:8652787/93‑1 (MQ=255)
                                                           cTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGCTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGggcgg                              <  2:9301859/93‑1 (MQ=255)
                                                            tGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGggcggc                             <  2:9117687/93‑1 (MQ=255)
                                                            tGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGggcggc                             <  1:1074265/93‑1 (MQ=255)
                                                             tgCTTGCGATGTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCa                            <  1:6449633/92‑1 (MQ=255)
                                                              gCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGggcggccg                           >  2:10018207/1‑91 (MQ=255)
                                                               cTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGa                          >  1:6027161/1‑93 (MQ=255)
                                                                 tGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGaaa                        >  1:9239906/1‑93 (MQ=255)
                                                                    gATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGc                     <  1:549538/93‑1 (MQ=255)
                                                                    gATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGc                     <  2:7613310/93‑1 (MQ=255)
                                                                    gATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGc                     <  1:9155520/93‑1 (MQ=255)
                                                                     aTCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCt                    <  2:1753775/93‑1 (MQ=255)
                                                                         cAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCa                <  1:5118349/93‑1 (MQ=255)
                                                                         cAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCa                <  1:743482/93‑1 (MQ=255)
                                                                          aaCGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAg               <  2:5600608/93‑1 (MQ=255)
                                                                          aaCGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAAGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAg               <  1:1837278/93‑1 (MQ=255)
                                                                            cGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAggg             <  2:5032704/93‑1 (MQ=255)
                                                                             ggAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGt            >  2:4055230/1‑93 (MQ=255)
                                                                               aaaGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTaa          <  1:7295901/93‑1 (MQ=255)
                                                                               aaaGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTaa          <  1:4238321/93‑1 (MQ=255)
                                                                                 aGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACg        >  1:3434562/1‑93 (MQ=255)
                                                                                  gACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGc       <  2:2059015/93‑1 (MQ=255)
                                                                                     ccGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCtgg    <  2:4759812/93‑1 (MQ=255)
                                                                                      cgtgcgtgCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCtggt   >  2:1184114/1‑93 (MQ=255)
                                                                                      cgtgcgtgCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCtggt   <  1:900290/93‑1 (MQ=255)
                                                                                      cgtgcgtgCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCtggg   >  2:3697988/1‑92 (MQ=255)
                                                                                       gtgcgtgcGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCtggtg  <  1:4652496/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGTGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTG  >  NC_000913/4067458‑4067637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 266 total aligned reads displayed.
AAGTTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGTGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGGCG  >  NC_000913/4067455‑4067640
                                                                                             |                                                                                            
AAGTTGCAGGTTAAATAAGGATGAATCCCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGC                                                                                              <  SRR4302540.401714/94‑1 (MQ=60)
AAGTTGCAGGTTAAATAAGGATGAATCCCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGC                                                                                              <  SRR4302540.7183667/94‑1 (MQ=60)
AAGTTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGC                                                                                              <  SRR4302540.4642249/94‑1 (MQ=60)
 AGTTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCG                                                                                             <  SRR4302540.9117567/94‑1 (MQ=60)
 AGTTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCG                                                                                             >  SRR4302540.5780270/1‑94 (MQ=60)
 AGTTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCG                                                                                             <  SRR4302540.8593157/94‑1 (MQ=60)
  GTTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGT                                                                                            <  SRR4302540.7229721/94‑1 (MQ=60)
   TTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTG                                                                                           <  SRR4302540.3593246/94‑1 (MQ=60)
   TTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTG                                                                                           >  SRR4302540.4495195/1‑94 (MQ=60)
   TTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGGGCGTG                                                                                           >  SRR4302540.10058023/1‑94 (MQ=60)
    TGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGC                                                                                          <  SRR4302540.2207466/94‑1 (MQ=60)
       AGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTT                                                                                       >  SRR4302540.6479702/1‑94 (MQ=60)
        GGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTG                                                                                      >  SRR4302540.2651186/1‑94 (MQ=60)
        GGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTG                                                                                      >  SRR4302540.7024605/1‑94 (MQ=60)
        GGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTG                                                                                      >  SRR4302540.9788565/1‑94 (MQ=60)
        GGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGCGCGTGCGTTG                                                                                      >  SRR4302540.2783972/1‑94 (MQ=60)
         GTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGA                                                                                     >  SRR4302540.4098258/1‑94 (MQ=60)
          TTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAG                                                                                    >  SRR4302540.2097639/1‑94 (MQ=60)
            AAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCG                                                                                  <  SRR4302540.7934420/94‑1 (MQ=60)
            AAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTATGGCTTTCGATCTTCACCGAAAAACCCCTGCGTGCGTTGAGCG                                                                                  >  SRR4302540.1332682/1‑94 (MQ=60)
             AATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGA                                                                                 >  SRR4302540.4810604/1‑94 (MQ=60)
             AATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGA                                                                                 >  SRR4302540.3006282/1‑94 (MQ=60)
              ATAAGGATGAATCCCCACGCCATACGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAA                                                                                <  SRR4302540.7364856/94‑1 (MQ=60)
              ATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAA                                                                                <  SRR4302540.2091205/94‑1 (MQ=60)
              ATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAA                                                                                <  SRR4302540.4689615/94‑1 (MQ=60)
              ATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAA                                                                                <  SRR4302540.7009902/94‑1 (MQ=60)
               TAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAAT                                                                               >  SRR4302540.2258004/1‑94 (MQ=60)
                AAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATA                                                                              >  SRR4302540.3753581/1‑94 (MQ=60)
                AAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATA                                                                              >  SRR4302540.5107210/1‑94 (MQ=60)
                AAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATA                                                                              >  SRR4302540.8449853/1‑94 (MQ=60)
                AAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATA                                                                              >  SRR4302540.30760/1‑94 (MQ=60)
                 AGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAA                                                                             >  SRR4302540.3429953/1‑94 (MQ=60)
                 AGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAA                                                                             <  SRR4302540.2588350/94‑1 (MQ=60)
                 AGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAA                                                                             <  SRR4302540.2583898/94‑1 (MQ=60)
                  GGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAA                                                                            >  SRR4302540.3378157/1‑94 (MQ=60)
                  GGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAA                                                                            <  SRR4302540.26634/94‑1 (MQ=60)
                   GATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAAC                                                                           <  SRR4302540.5568007/94‑1 (MQ=60)
                   GATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAAC                                                                           <  SRR4302540.8650749/94‑1 (MQ=60)
                   GATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAAA                                                                           >  SRR4302540.8796646/1‑94 (MQ=60)
                    ATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACA                                                                          >  SRR4302540.5683613/1‑94 (MQ=60)
                    ATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACA                                                                          >  SRR4302540.8075803/1‑94 (MQ=60)
                    ATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACA                                                                          <  SRR4302540.4026736/94‑1 (MQ=60)
                     TGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAA                                                                         <  SRR4302540.5887381/94‑1 (MQ=60)
                     TGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAA                                                                         <  SRR4302540.6002615/94‑1 (MQ=60)
                     TGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAA                                                                         >  SRR4302540.3974595/1‑94 (MQ=60)
                      GAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAAC                                                                        <  SRR4302540.6599777/94‑1 (MQ=60)
                       AATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACT                                                                       >  SRR4302540.1188965/1‑94 (MQ=60)
                       AATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACT                                                                       >  SRR4302540.7799846/1‑94 (MQ=60)
                       AATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACT                                                                       <  SRR4302540.3669136/94‑1 (MQ=60)
                        ATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTT                                                                      <  SRR4302540.7398840/94‑1 (MQ=60)
                        ATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGCGCGTTGAGCGAATACACAAATT                                                                      >  SRR4302540.241248/1‑94 (MQ=60)
                        ATACCCAACCCAGAAGGCGATGCCACAGTTGCGATATTCTGTCTTGCGAGCTCAACGGAAAGACCCGTGCGGGCGTTGAGCGAATAAACAACTT                                                                      <  SRR4302540.7398841/94‑1 (MQ=40)
                         TACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTG                                                                     >  SRR4302540.9507004/1‑94 (MQ=60)
                         TACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTG                                                                     <  SRR4302540.6252951/94‑1 (MQ=60)
                         TACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTG                                                                     >  SRR4302540.5191075/1‑94 (MQ=60)
                         TACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTG                                                                     <  SRR4302540.8145625/94‑1 (MQ=60)
                          ACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGT                                                                    <  SRR4302540.5614726/94‑1 (MQ=60)
                          ACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGT                                                                    <  SRR4302540.8672764/94‑1 (MQ=60)
                          ACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGT                                                                    <  SRR4302540.8783507/94‑1 (MQ=60)
                          ACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGG                                                                    >  SRR4302540.3466263/1‑94 (MQ=60)
                           ccgagGCCATAAGGCGCTGCGACAGTCCCGATGTTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTG                                                                   <  SRR4302540.5625648/89‑1 (MQ=60)
                           CCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTG                                                                   <  SRR4302540.6621957/94‑1 (MQ=60)
                           CCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTG                                                                   <  SRR4302540.6246893/94‑1 (MQ=60)
                            CCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGA                                                                  >  SRR4302540.512075/1‑94 (MQ=60)
                            CCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGA                                                                  <  SRR4302540.8560384/94‑1 (MQ=60)
                            CCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGA                                                                  >  SRR4302540.2741134/1‑94 (MQ=60)
                            CCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGA                                                                  >  SRR4302540.9332646/1‑94 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGGGTTGAGCGAATAAACAACTTGTGAA                                                                 >  SRR4302540.7465405/1‑94 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAA                                                                 <  SRR4302540.6989858/94‑1 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAA                                                                 >  SRR4302540.5168995/1‑94 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAA                                                                 <  SRR4302540.4746665/94‑1 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAA                                                                 <  SRR4302540.1589682/94‑1 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAA                                                                 <  SRR4302540.9164031/94‑1 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAA                                                                 <  SRR4302540.9299914/94‑1 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAA                                                                 <  SRR4302540.3310857/94‑1 (MQ=60)
                             CACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAA                                                                 <  SRR4302540.10152632/94‑1 (MQ=60)
                              ACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAG                                                                <  SRR4302540.1017049/94‑1 (MQ=60)
                              ACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAG                                                                >  SRR4302540.8162366/1‑94 (MQ=60)
                              ACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAG                                                                <  SRR4302540.6763210/94‑1 (MQ=60)
                               CGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGC                                                               >  SRR4302540.7181553/1‑94 (MQ=60)
                                GCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCC                                                              <  SRR4302540.8323226/94‑1 (MQ=60)
                                GCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCC                                                              >  SRR4302540.4746697/1‑94 (MQ=60)
                                GCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCC                                                              <  SRR4302540.5101913/94‑1 (MQ=60)
                                 CCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCA                                                             >  SRR4302540.9440956/1‑94 (MQ=60)
                                 CCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCA                                                             <  SRR4302540.4862615/94‑1 (MQ=60)
                                 CCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCA                                                             <  SRR4302540.8619431/94‑1 (MQ=60)
                                  CATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGGGTTGAGGGAATAAACAACTTGTGAAGCCAG                                                            >  SRR4302540.2413724/1‑94 (MQ=60)
                                  CATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAG                                                            <  SRR4302540.9403848/94‑1 (MQ=60)
                                   ATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAccttcggaacacaga                                                           >  SRR4302540.7104502/1‑79 (MQ=60)
                                   ATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGC                                                           >  SRR4302540.5280951/1‑94 (MQ=60)
                                   ATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGC                                                           >  SRR4302540.8141279/1‑94 (MQ=60)
                                   ATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGC                                                           >  SRR4302540.8607837/1‑94 (MQ=60)
                                    TAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCA                                                          <  SRR4302540.6721104/94‑1 (MQ=60)
                                    TAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCA                                                          <  SRR4302540.6605364/94‑1 (MQ=60)
                                     AAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCAT                                                         <  SRR4302540.815347/94‑1 (MQ=60)
                                     AAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCAT                                                         >  SRR4302540.3825925/1‑94 (MQ=60)
                                     AAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCAT                                                         <  SRR4302540.8872307/94‑1 (MQ=60)
                                      AGGCGCTGCGACAGTGCCGATATTCTGGCTTGCTATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATA                                                        <  SRR4302540.8046267/94‑1 (MQ=60)
                                      AGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATA                                                        >  SRR4302540.7853112/1‑94 (MQ=60)
                                      AGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATA                                                        >  SRR4302540.2436553/1‑94 (MQ=60)
                                       GGCGCTGCGACAGTGCCGATATTCTGTCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAA                                                       <  SRR4302540.2551255/94‑1 (MQ=60)
                                       GGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAA                                                       >  SRR4302540.1821343/1‑94 (MQ=60)
                                        GCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAA                                                      <  SRR4302540.342173/94‑1 (MQ=60)
                                         CGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAG                                                     >  SRR4302540.7993085/1‑94 (MQ=60)
                                         CGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAC                                                     <  SRR4302540.6412103/94‑1 (MQ=60)
                                         CGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAC                                                     <  SRR4302540.8256637/94‑1 (MQ=60)
                                         CGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAC                                                     <  SRR4302540.5413450/94‑1 (MQ=60)
                                         CGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAC                                                     <  SRR4302540.980754/94‑1 (MQ=60)
                                         CGCTGCGACAATGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAC                                                     <  SRR4302540.2548249/94‑1 (MQ=60)
                                           CTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGG                                                   <  SRR4302540.7459769/94‑1 (MQ=60)
                                             GCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGAT                                                 <  SRR4302540.1090226/94‑1 (MQ=60)
                                             GCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGAT                                                 <  SRR4302540.7351590/94‑1 (MQ=60)
                                             GCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGAT                                                 <  SRR4302540.8058713/94‑1 (MQ=60)
                                              CGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATA                                                <  SRR4302540.787679/94‑1 (MQ=60)
                                              CGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATA                                                <  SRR4302540.3999542/94‑1 (MQ=60)
                                               GCCAGTGCCGATATTCTGGCANGCGATCTCAACGGAAAGCCCCGTGCGTGCGTTAAGCGAATAAACAACTTGTCAAGCCAGCATAAACGGATAG                                               <  SRR4302540.905079/94‑1 (MQ=60)
                                                ACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGC                                              >  SRR4302540.2883761/1‑94 (MQ=60)
                                                ACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGC                                              >  SRR4302540.5192151/1‑94 (MQ=60)
                                                 CAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGCGCGAATAAACAACTTGTGAAGCACGCATAAACGaataaca                                             >  SRR4302540.2337775/1‑87 (MQ=60)
                                                 CAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGACAGCATAAACGGATAGCC                                             >  SRR4302540.738805/1‑94 (MQ=60)
                                                  AGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCT                                            >  SRR4302540.7198381/1‑94 (MQ=60)
                                                  AGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCG                                            >  SRR4302540.3331934/1‑94 (MQ=60)
                                                  AGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCG                                            <  SRR4302540.4356583/94‑1 (MQ=60)
                                                  AGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCG                                            <  SRR4302540.4672457/94‑1 (MQ=60)
                                                  AGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCG                                            <  SRR4302540.8925930/94‑1 (MQ=60)
                                                  AGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGAATAAACGGATAGCCG                                            <  SRR4302540.8051808/94‑1 (MQ=60)
                                                   GTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGT                                           >  SRR4302540.9844946/1‑94 (MQ=60)
                                                   GTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGT                                           >  SRR4302540.9619736/1‑94 (MQ=60)
                                                    TGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTA                                          >  SRR4302540.3596960/1‑94 (MQ=60)
                                                    TGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTA                                          >  SRR4302540.8170628/1‑94 (MQ=60)
                                                    TGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACCTGTGAAGCCAGCATAAACGGATAGCCGTA                                          <  SRR4302540.5582460/94‑1 (MQ=60)
                                                      CCGATATTCTGGCTTGCGATCTCAACGGAAAGGCCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAAC                                        <  SRR4302540.2409232/94‑1 (MQ=60)
                                                      CCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAAC                                        <  SRR4302540.1080488/94‑1 (MQ=60)
                                                      CCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAAC                                        <  SRR4302540.1193663/94‑1 (MQ=60)
                                                      CCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAAC                                        <  SRR4302540.7678266/94‑1 (MQ=60)
                                                       CGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACT                                       <  SRR4302540.2633214/94‑1 (MQ=60)
                                                       CGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACT                                       <  SRR4302540.5956218/94‑1 (MQ=60)
                                                       CGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACT                                       <  SRR4302540.4569189/94‑1 (MQ=60)
                                                       CGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACT                                       >  SRR4302540.839589/1‑94 (MQ=60)
                                                         ATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGG                                     >  SRR4302540.10051719/1‑94 (MQ=60)
                                                         ATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGG                                     >  SRR4302540.2141635/1‑94 (MQ=60)
                                                         ATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGG                                     >  SRR4302540.1359321/1‑94 (MQ=60)
                                                         ATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGG                                     <  SRR4302540.7445938/94‑1 (MQ=60)
                                                          TATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGG                                    >  SRR4302540.1954339/1‑94 (MQ=60)
                                                           ATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTCACTGGGG                                   >  SRR4302540.5800023/1‑94 (MQ=60)
                                                           ATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGG                                   >  SRR4302540.1396381/1‑94 (MQ=60)
                                                           ATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGC                                   <  SRR4302540.2939225/94‑1 (MQ=60)
                                                            TTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCG                                  <  SRR4302540.3428596/94‑1 (MQ=60)
                                                            TTCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCG                                  <  SRR4302540.2658721/94‑1 (MQ=60)
                                                             TCTGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGG                                 >  SRR4302540.6125203/1‑94 (MQ=60)
                                                               TGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCA                               <  SRR4302540.1085234/94‑1 (MQ=60)
                                                               TGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCA                               >  SRR4302540.7100099/1‑94 (MQ=60)
                                                               TGGCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCA                               >  SRR4302540.2263262/1‑94 (MQ=60)
                                                                TGCTTGCGATGTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAG                              <  SRR4302540.6521422/94‑1 (MQ=60)
                                                                 GCTTGCGATCTCAACGGAAAGACCCGTGCGTGTGTTGAGCGAATAAACAACTTATGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGA                             >  SRR4302540.6967595/1‑94 (MQ=60)
                                                                 GCTTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGA                             >  SRR4302540.6094041/1‑94 (MQ=60)
                                                                   TTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAA                           >  SRR4302540.5643595/1‑94 (MQ=60)
                                                                   TTGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAA                           >  SRR4302540.1172942/1‑94 (MQ=60)
                                                                    TGCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAA                          <  SRR4302540.8885265/94‑1 (MQ=60)
                                                                     GCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAG                         <  SRR4302540.3791565/94‑1 (MQ=60)
                                                                     GCGATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAG                         >  SRR4302540.6697935/1‑94 (MQ=60)
                                                                       GATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCT                       <  SRR4302540.9265435/94‑1 (MQ=60)
                                                                       GATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCT                       <  SRR4302540.815730/94‑1 (MQ=60)
                                                                        ATCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTG                      >  SRR4302540.8318944/1‑94 (MQ=60)
                                                                         TCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGT                     <  SRR4302540.295113/94‑1 (MQ=60)
                                                                         TCTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGT                     >  SRR4302540.8759445/1‑94 (MQ=60)
                                                                          CTCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTC                    <  SRR4302540.9645462/94‑1 (MQ=60)
                                                                           TCAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCA                   <  SRR4302540.4547433/94‑1 (MQ=60)
                                                                            CAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAG                  <  SRR4302540.751407/94‑1 (MQ=60)
                                                                            CAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAG                  <  SRR4302540.2117047/94‑1 (MQ=60)
                                                                            CAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAG                  <  SRR4302540.1922836/94‑1 (MQ=60)
                                                                            CAACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAG                  <  SRR4302540.5173765/94‑1 (MQ=60)
                                                                             AACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGG                 <  SRR4302540.3275376/94‑1 (MQ=60)
                                                                             AACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGG                 <  SRR4302540.6681801/94‑1 (MQ=60)
                                                                             AACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAAAGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGG                 <  SRR4302540.1857400/94‑1 (MQ=60)
                                                                              ACGGAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGG                <  SRR4302540.4892683/94‑1 (MQ=60)
                                                                                 GAAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAA             <  SRR4302540.7678479/94‑1 (MQ=60)
                                                                                  GAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAAC            <  SRR4302540.6495316/94‑1 (MQ=60)
                                                                                  AAAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAAC            <  SRR4302540.4284439/94‑1 (MQ=60)
                                                                                   AAGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACG           >  SRR4302540.3471900/1‑94 (MQ=60)
                                                                                    AGACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGC          >  SRR4302540.8434280/1‑94 (MQ=60)
                                                                                     GACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCT         <  SRR4302540.3573667/94‑1 (MQ=60)
                                                                                      ACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTG        <  SRR4302540.2172648/94‑1 (MQ=60)
                                                                                      ACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTG        >  SRR4302540.4251153/1‑94 (MQ=60)
                                                                                      ACCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTG        <  SRR4302540.306646/94‑1 (MQ=60)
                                                                                       CCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGG       <  SRR4302540.6972685/94‑1 (MQ=60)
                                                                                       CCCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGG       >  SRR4302540.5501926/1‑94 (MQ=60)
                                                                                        CCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGT      >  SRR4302540.9200841/1‑94 (MQ=60)
                                                                                        CCGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGCAACGCTGGT      >  SRR4302540.9327441/1‑94 (MQ=60)
                                                                                         CGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTG     >  SRR4302540.5565605/1‑94 (MQ=60)
                                                                                         CGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTG     <  SRR4302540.909858/94‑1 (MQ=60)
                                                                                         CGTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTG     <  SRR4302540.5453544/94‑1 (MQ=60)
                                                                                          GTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGG    <  SRR4302540.4702284/94‑1 (MQ=60)
                                                                                          GTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGG    >  SRR4302540.5775065/1‑94 (MQ=60)
                                                                                          GTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGG    >  SRR4302540.9771683/1‑94 (MQ=60)
                                                                                          GTGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGG    <  SRR4302540.511186/94‑1 (MQ=60)
                                                                                           TGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGCTAGCCGTAACTGGGCGGCAGAACAGCTGTCAGGGTAACGCTGGAGGC   >  SRR4302540.4093895/1‑94 (MQ=60)
                                                                                           TGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGGC   <  SRR4302540.7130019/94‑1 (MQ=60)
                                                                                           TGCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGGC   >  SRR4302540.1506048/1‑94 (MQ=60)
                                                                                            GCGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGGCG  <  SRR4302540.6160386/94‑1 (MQ=60)
                                                                                             |                                                                                            
AAGTTGCAGGTTAAATAAGGATGAATACCCACGCCATAAGGCGCTGCGACAGTGCCGATATTCTGGCTTGCGATCTCAACGGAAAGACCCGTGTGTGCGTTGAGCGAATAAACAACTTGTGAAGCCAGCATAAACGGATAGCCGTAACTGGGCGGCAGAAAAGCTGTCAGGGTAACGCTGGTGGCG  >  NC_000913/4067455‑4067640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑