Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,076,069 T→C intergenic (+51/‑775) yiiD → / → yiiE putative acetyltransferase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,076,0690TC99.3% 976.1 / ‑3.3 303intergenic (+51/‑775)yiiD/yiiEputative acetyltransferase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (157/143);  total (158/145)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.88e-01

Only 100 of 310 total aligned reads displayed.

ATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGTCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTTCAG  >  NC_000913/4075979‑4076158
                                                                                          |                                                                                         
aTTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGccc                                                                                         >  1:5230983/1‑93 (MQ=255)
aTTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGccc                                                                                         <  2:4426160/93‑1 (MQ=255)
 tttGGCCCGTATGAAGAGGGCGGGTACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCt                                                                                        >  2:6282712/1‑93 (MQ=255)
 tttGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCt                                                                                        <  1:1440210/93‑1 (MQ=255)
   tGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTg                                                                                      <  1:9246742/93‑1 (MQ=255)
   tGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTg                                                                                      <  1:9299825/93‑1 (MQ=255)
   tGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTg                                                                                      <  1:3346338/93‑1 (MQ=255)
       ccGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTa                                                                                  >  2:9669786/1‑93 (MQ=255)
       ccGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTa                                                                                  <  2:711049/93‑1 (MQ=255)
        cGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTAt                                                                                 >  2:5090725/1‑93 (MQ=255)
         gTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTAtt                                                                                <  1:2603001/93‑1 (MQ=255)
          tATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTAttt                                                                               <  2:3926847/93‑1 (MQ=255)
          aaTGAAGAGGGCGGAAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGGTAttt                                                                               <  2:5853247/92‑1 (MQ=255)
            tGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCg                                                                             >  1:5019485/1‑93 (MQ=255)
             gAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCgg                                                                            >  2:3690797/1‑93 (MQ=255)
             gAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCgg                                                                            >  2:3351276/1‑93 (MQ=255)
              aaGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGt                                                                           <  2:729878/93‑1 (MQ=255)
              aaGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGt                                                                           >  1:7652464/1‑93 (MQ=255)
                 agGGCTGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCATTGGCTATTTCGGTtat                                                                        <  1:2450454/93‑1 (MQ=255)
                  gggCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTtata                                                                       <  1:4697606/93‑1 (MQ=255)
                  gggCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTtata                                                                       >  2:9602871/1‑93 (MQ=255)
                    gCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCGCTTGGCTATTTCGGTTATAtt                                                                     >  2:6850271/1‑93 (MQ=255)
                    gCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATAtt                                                                     <  2:1053469/93‑1 (MQ=255)
                    gCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATAtt                                                                     <  2:8760077/93‑1 (MQ=255)
                     cGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTa                                                                    <  1:9757516/93‑1 (MQ=255)
                     cGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTa                                                                    <  1:3136550/93‑1 (MQ=255)
                       ggAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTaaa                                                                  <  2:5226729/93‑1 (MQ=255)
                        gAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAAt                                                                 >  1:6633159/1‑93 (MQ=255)
                          aCGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATaa                                                               >  1:9014234/1‑93 (MQ=255)
                          aCGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATaa                                                               <  2:7402026/93‑1 (MQ=255)
                           cGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAg                                                              <  1:1003991/93‑1 (MQ=255)
                            gaagaaGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGa                                                             >  1:5372802/1‑93 (MQ=255)
                            gaagaaGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGa                                                             >  1:9800274/1‑93 (MQ=255)
                             aagaagAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGaa                                                            <  2:7714479/93‑1 (MQ=255)
                              agaagaGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAAc                                                           >  1:8403419/1‑93 (MQ=255)
                                aagaGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAActc                                                         <  2:9448197/93‑1 (MQ=255)
                                aagaGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAActc                                                         >  1:4518099/1‑93 (MQ=255)
                                 agagTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAActct                                                        <  1:2172050/93‑1 (MQ=255)
                                  gagTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCta                                                       >  2:2045293/1‑93 (MQ=255)
                                  gagTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCta                                                       >  2:8921195/1‑93 (MQ=255)
                                  gagTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCta                                                       <  2:3199468/93‑1 (MQ=255)
                                   agTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCtat                                                      <  1:6910938/93‑1 (MQ=255)
                                    gTATCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCtata                                                     <  2:583126/93‑1 (MQ=255)
                                    gTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCtata                                                     <  2:292474/93‑1 (MQ=255)
                                    gTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCtata                                                     >  1:8900260/1‑93 (MQ=255)
                                     tAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTACATAAGAACTCTATaa                                                    >  1:90457/1‑93 (MQ=255)
                                     tAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATaa                                                    >  2:5670681/1‑93 (MQ=255)
                                     tAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATaa                                                    >  2:6084212/1‑93 (MQ=255)
                                     tAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATaa                                                    >  2:9541584/1‑93 (MQ=255)
                                      aGCTGACGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATaaa                                                   <  1:6277067/93‑1 (MQ=255)
                                       gCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAAt                                                  >  1:775463/1‑93 (MQ=255)
                                          gATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAAtttt                                               >  1:1975276/1‑93 (MQ=255)
                                           aTGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAAttttt                                              >  1:7173197/1‑93 (MQ=255)
                                              gagaGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAtt                                           >  2:839679/1‑93 (MQ=255)
                                              gagaGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAtt                                           <  2:8027397/93‑1 (MQ=255)
                                              gagaGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAtt                                           >  1:7813130/1‑93 (MQ=255)
                                               ggagGGGCGGTGCTGCCTCTCTCATTCAGGTTATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAttc                                          <  2:1647143/92‑1 (MQ=255)
                                               agagGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAttc                                          <  1:3999946/93‑1 (MQ=255)
                                                gagGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAttct                                         >  1:4449814/1‑93 (MQ=255)
                                                gagGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAttct                                         <  1:3783779/93‑1 (MQ=255)
                                                 agGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAttctt                                        >  1:1843657/1‑93 (MQ=255)
                                                  ggggCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAttcttc                                       <  2:4652639/93‑1 (MQ=255)
                                                  ggggCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAttcttc                                       >  2:1792184/1‑93 (MQ=255)
                                                   gggCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCg                                      <  2:6620531/93‑1 (MQ=255)
                                                    ggCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGt                                     <  1:6792670/93‑1 (MQ=255)
                                                     gCGGTGCTGCCTCTCTCATTCAGCTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGtt                                    <  2:5558780/93‑1 (MQ=255)
                                                        gTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGc                                 >  1:8663981/1‑93 (MQ=255)
                                                        gTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGc                                 >  2:5918633/1‑93 (MQ=255)
                                                        gTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGc                                 >  1:6855793/1‑93 (MQ=255)
                                                        gTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGc                                 >  1:6077858/1‑93 (MQ=255)
                                                        gTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGGTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGc                                 >  1:5820901/1‑93 (MQ=255)
                                                         tgctgcCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCt                                <  2:3505470/93‑1 (MQ=255)
                                                         tgctgcCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCt                                >  1:7396916/1‑93 (MQ=255)
                                                             gcCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCAt                            >  1:5987835/1‑93 (MQ=255)
                                                              ccTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATa                           <  2:8292456/93‑1 (MQ=255)
                                                                tctctcATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTNTNATTCTTCGTTGGCTCCATACg                         >  1:2643688/1‑93 (MQ=255)
                                                                cctctcATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACg                         <  2:7640301/92‑1 (MQ=255)
                                                                 ctctcATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACgt                        >  2:1612236/1‑93 (MQ=255)
                                                                  tctcATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACgtg                       >  1:5537188/1‑93 (MQ=255)
                                                                  tctcATTCAGGTCATTTATATTAG‑CCTTGGCTATTTCGGGTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTTGCTTCCTAAgtgt                      >  2:5313675/1‑93 (MQ=255)
                                                                    tcATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTc                     >  1:137483/1‑93 (MQ=255)
                                                                     cATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCt                    >  1:1699516/1‑93 (MQ=255)
                                                                     cATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCt                    >  1:4288152/1‑93 (MQ=255)
                                                                     cATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCt                    >  2:9053381/1‑93 (MQ=255)
                                                                      aTTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCtt                   >  2:4522751/1‑93 (MQ=255)
                                                                      aTTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCtt                   >  2:7783846/1‑93 (MQ=255)
                                                                       ttCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTg                  >  2:6762498/1‑93 (MQ=255)
                                                                       ttCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTg                  <  2:2170937/93‑1 (MQ=255)
                                                                       ttCAGGACATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTg                  >  1:1801688/1‑93 (MQ=255)
                                                                        tCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGc                 >  2:5031958/1‑93 (MQ=255)
                                                                        tCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGc                 <  1:966518/93‑1 (MQ=255)
                                                                         cAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCt                >  1:5648044/1‑93 (MQ=255)
                                                                           ggTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTAc              <  2:2733662/93‑1 (MQ=255)
                                                                            gTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACa             <  2:1377200/93‑1 (MQ=255)
                                                                             tCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACAt            <  1:1759285/93‑1 (MQ=255)
                                                                              cATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATc           >  2:1455943/1‑93 (MQ=255)
                                                                              cATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATc           >  1:3447222/1‑93 (MQ=255)
                                                                               aTTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCa          <  2:2363965/93‑1 (MQ=255)
                                                                                tttATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCAc         >  1:5295576/1‑93 (MQ=255)
                                                                                tttATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCAc         <  2:4962735/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGTCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTTCAG  >  NC_000913/4075979‑4076158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGTCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTTCAGGAGC  >  NC_000913/4075976‑4076162
                                                                                             |                                                                                             
GCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGC                                                                                               <  SRR4302540.7756375/94‑1 (MQ=60)
GCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGAAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGC                                                                                               >  SRR4302540.603885/1‑94 (MQ=60)
 CCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCC                                                                                              <  SRR4302540.5751699/94‑1 (MQ=60)
  CATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCC                                                                                             <  SRR4302540.5926843/94‑1 (MQ=60)
  CATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCC                                                                                             >  SRR4302540.5288026/1‑94 (MQ=60)
   ATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCT                                                                                            >  SRR4302540.3478243/1‑94 (MQ=60)
   ATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCT                                                                                            <  SRR4302540.1942399/94‑1 (MQ=60)
    TTTGGCCCGTATGAAGAGGGCGGGATCGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCGGCCTCTCTCATTCAGGTCATTTATATTAGCCCTT                                                                                           <  SRR4302540.1455845/94‑1 (MQ=60)
    TTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTT                                                                                           <  SRR4302540.7886187/94‑1 (MQ=60)
    TTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTT                                                                                           >  SRR4302540.6460464/1‑94 (MQ=60)
    TTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTT                                                                                           <  SRR4302540.1455846/94‑1 (MQ=60)
    TTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTT                                                                                           <  SRR4302540.5325898/94‑1 (MQ=60)
     TTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTG                                                                                          >  SRR4302540.9185010/1‑94 (MQ=60)
     TTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTG                                                                                          >  SRR4302540.3519677/1‑94 (MQ=60)
      TGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGG                                                                                         <  SRR4302540.9410918/94‑1 (MQ=60)
      TGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGG                                                                                         <  SRR4302540.9357457/94‑1 (MQ=60)
      TGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGG                                                                                         <  SRR4302540.3383044/94‑1 (MQ=60)
       GGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGC                                                                                        <  SRR4302540.5277606/94‑1 (MQ=60)
         CCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTA                                                                                      >  SRR4302540.9883817/1‑94 (MQ=60)
            GTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTT                                                                                   >  SRR4302540.5945712/1‑94 (MQ=60)
            GTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTT                                                                                   >  SRR4302540.1489044/1‑94 (MQ=60)
            GTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTT                                                                                   <  SRR4302540.2631077/94‑1 (MQ=60)
            GTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTT                                                                                   >  SRR4302540.6241290/1‑94 (MQ=60)
            GTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTT                                                                                   >  SRR4302540.770447/1‑94 (MQ=60)
             TATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTC                                                                                  <  SRR4302540.2547936/94‑1 (MQ=60)
              ATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTTATTCAGGTCATTTATATTAGCCCTTGGCTATTTCG                                                                                 <  SRR4302540.674326/94‑1 (MQ=60)
              ATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCG                                                                                 >  SRR4302540.5073824/1‑94 (MQ=60)
               TGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGG                                                                                <  SRR4302540.5263431/94‑1 (MQ=60)
               AGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGG                                                                                <  SRR4302540.9145761/94‑1 (MQ=60)
                GAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGT                                                                               >  SRR4302540.7738608/1‑94 (MQ=60)
                GAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGT                                                                               >  SRR4302540.1315922/1‑94 (MQ=60)
                GAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGT                                                                               >  SRR4302540.7738607/1‑94 (MQ=60)
                 AAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTT                                                                              <  SRR4302540.6919481/94‑1 (MQ=60)
                  AGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTA                                                                             >  SRR4302540.9120441/1‑94 (MQ=60)
                   GAGGGGGGGAACGAAGAAGGGTAGCTGATGGAGAGGGGCGGGGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTAT                                                                            <  SRR4302540.9360646/94‑1 (MQ=60)
                   GAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTAT                                                                            <  SRR4302540.6882495/94‑1 (MQ=60)
                    AGGGCTGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCATTGGCTATTTCGGTTATA                                                                           <  SRR4302540.2476838/94‑1 (MQ=60)
                     GGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATAT                                                                          <  SRR4302540.4747822/94‑1 (MQ=60)
                     GGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATAT                                                                          <  SRR4302540.4747821/94‑1 (MQ=60)
                     GGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATAT                                                                          <  SRR4302540.1249766/94‑1 (MQ=60)
                        CGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAA                                                                       <  SRR4302540.9871982/94‑1 (MQ=60)
                        CGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAA                                                                       <  SRR4302540.9871981/94‑1 (MQ=60)
                        CGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAA                                                                       >  SRR4302540.6408382/1‑94 (MQ=60)
                        CGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAA                                                                       <  SRR4302540.9926149/94‑1 (MQ=60)
                        CGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAA                                                                       <  SRR4302540.7053442/94‑1 (MQ=60)
                        CGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAA                                                                       <  SRR4302540.3170758/94‑1 (MQ=60)
                         GGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAA                                                                      >  SRR4302540.8788254/1‑94 (MQ=60)
                         GGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAA                                                                      >  SRR4302540.9166838/1‑94 (MQ=60)
                         GGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAA                                                                      >  SRR4302540.9753698/1‑94 (MQ=60)
                          GGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAAT                                                                     <  SRR4302540.2558277/94‑1 (MQ=60)
                          GGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAAT                                                                     >  SRR4302540.6706574/1‑94 (MQ=60)
                          GGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAAT                                                                     <  SRR4302540.2558276/94‑1 (MQ=60)
                          GGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAAT                                                                     <  SRR4302540.8559272/94‑1 (MQ=60)
                          GGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAAT                                                                     <  SRR4302540.4510524/94‑1 (MQ=60)
                           GAACGAAGAAGGGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATA                                                                    >  SRR4302540.9678737/1‑94 (MQ=60)
                           GAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATA                                                                    <  SRR4302540.8424026/94‑1 (MQ=60)
                            AACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAA                                                                   >  SRR4302540.9122383/1‑94 (MQ=60)
                            AACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTACCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAA                                                                   >  SRR4302540.5722487/1‑94 (MQ=60)
                             ACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAG                                                                  <  SRR4302540.6716953/94‑1 (MQ=60)
                             ACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAG                                                                  <  SRR4302540.3442974/94‑1 (MQ=60)
                              CGAAGAAGAGTAGCTGTTGGAGAGGGCCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGTCCTTGGCTATTTCGGTTATATTAAATAAGA                                                                 <  SRR4302540.6090240/94‑1 (MQ=60)
                              CGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGA                                                                 >  SRR4302540.5431864/1‑94 (MQ=60)
                              CGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGA                                                                 >  SRR4302540.9915024/1‑94 (MQ=60)
                              CGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGA                                                                 <  SRR4302540.1014182/94‑1 (MQ=60)
                               GAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAA                                                                >  SRR4302540.5910745/1‑94 (MQ=60)
                                AAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAAC                                                               >  SRR4302540.8500960/1‑94 (MQ=60)
                                AAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAAC                                                               <  SRR4302540.3211191/94‑1 (MQ=60)
                                  GAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTC                                                             >  SRR4302540.4567037/1‑94 (MQ=60)
                                  GAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTC                                                             >  SRR4302540.4567036/1‑94 (MQ=60)
                                  GAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTC                                                             >  SRR4302540.4405216/1‑94 (MQ=60)
                                    AGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTA                                                           <  SRR4302540.2195474/94‑1 (MQ=60)
                                    AGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTA                                                           >  SRR4302540.375458/1‑94 (MQ=60)
                                     GAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTAT                                                          <  SRR4302540.3854657/94‑1 (MQ=60)
                                      AGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATA                                                         <  SRR4302540.6987824/94‑1 (MQ=60)
                                      AGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATA                                                         >  SRR4302540.9003292/1‑94 (MQ=60)
                                      AGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATA                                                         <  SRR4302540.6944213/94‑1 (MQ=60)
                                       GTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTACATAAGAACTCTATAA                                                        >  SRR4302540.91413/1‑94 (MQ=60)
                                       GTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAA                                                        >  SRR4302540.91412/1‑94 (MQ=60)
                                       GTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAA                                                        <  SRR4302540.2967905/94‑1 (MQ=60)
                                         AGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAAT                                                      >  SRR4302540.783701/1‑94 (MQ=60)
                                         AGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAAT                                                      <  SRR4302540.6346898/94‑1 (MQ=60)
                                         AGCTGACGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAAT                                                      <  SRR4302540.6346899/94‑1 (MQ=60)
                                           CTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTT                                                    <  SRR4302540.9813542/94‑1 (MQ=60)
                                            TGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTT                                                   >  SRR4302540.1996707/1‑94 (MQ=60)
                                             GATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTT                                                  <  SRR4302540.1787103/94‑1 (MQ=60)
                                             GATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTT                                                  >  SRR4302540.7253151/1‑94 (MQ=60)
                                              ATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTA                                                 >  SRR4302540.8220011/1‑94 (MQ=60)
                                               TGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTAT                                                >  SRR4302540.8536696/1‑94 (MQ=60)
                                                GGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATT                                               >  SRR4302540.7904152/1‑94 (MQ=60)
                                                GGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATT                                               >  SRR4302540.7904432/1‑94 (MQ=60)
                                                GGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATT                                               <  SRR4302540.695828/94‑1 (MQ=60)
                                                  AGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCT                                             <  SRR4302540.4042990/94‑1 (MQ=60)
                                                  AGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCT                                             >  SRR4302540.4498040/1‑94 (MQ=60)
                                                  AGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCT                                             <  SRR4302540.4626916/94‑1 (MQ=60)
                                                   GAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTT                                            <  SRR4302540.3906245/94‑1 (MQ=60)
                                                   GAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTT                                            <  SRR4302540.5415056/94‑1 (MQ=60)
                                                   GAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTT                                            >  SRR4302540.1863855/1‑94 (MQ=60)
                                                   GAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTT                                            <  SRR4302540.3825045/94‑1 (MQ=60)
                                                    AGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTC                                           >  SRR4302540.4582845/1‑94 (MQ=60)
                                                    AGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTC                                           <  SRR4302540.9031168/94‑1 (MQ=60)
                                                    AGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTC                                           <  SRR4302540.1756553/94‑1 (MQ=60)
                                                       GGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTT                                        <  SRR4302540.6867799/94‑1 (MQ=60)
                                                        ccgcTGCTGCCTCTCTCATTCAGGTCATTTATATTATCCCTTTTCTATTTCGGTTATATTAAATACGAACTCTATAAATTTTTATTCTTCGTTT                                       <  SRR4302540.4219471/90‑1 (MQ=60)
                                                        GCGTTTCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTG                                       <  SRR4302540.8678443/94‑1 (MQ=60)
                                                        GCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTG                                       <  SRR4302540.5474462/94‑1 (MQ=60)
                                                          GGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGC                                     >  SRR4302540.6145441/1‑94 (MQ=60)
                                                          GGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGC                                     >  SRR4302540.7295674/1‑94 (MQ=60)
                                                          GGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGC                                     >  SRR4302540.6931748/1‑94 (MQ=60)
                                                          GGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGC                                     >  SRR4302540.8764613/1‑94 (MQ=60)
                                                          GGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGC                                     >  SRR4302540.5885235/1‑94 (MQ=60)
                                                          GGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGC                                     >  SRR4302540.4847918/1‑94 (MQ=60)
                                                          GGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGGTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGC                                     >  SRR4302540.5885236/1‑94 (MQ=60)
                                                           GTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCT                                    >  SRR4302540.1828528/1‑94 (MQ=60)
                                                           GTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCT                                    >  SRR4302540.7479331/1‑94 (MQ=60)
                                                           GTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCT                                    >  SRR4302540.1429247/1‑94 (MQ=60)
                                                           GTGCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCT                                    >  SRR4302540.7479329/1‑94 (MQ=60)
                                                             gcgtCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCC                                  <  SRR4302540.4113433/90‑1 (MQ=60)
                                                             GCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCC                                  <  SRR4302540.4113431/94‑1 (MQ=60)
                                                             GCTGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACACTATAAATTTTTATTCTTCGTTGGCTCC                                  <  SRR4302540.7745889/94‑1 (MQ=60)
                                                               TGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAATTATGACTTCTATAAATTTTTATTCTTCGTTGCCTCCTT                                >  SRR4302540.6054158/1‑94 (MQ=60)
                                                               TGCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCAT                                >  SRR4302540.6054157/1‑94 (MQ=60)
                                                                GCCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATA                               >  SRR4302540.1002132/1‑94 (MQ=60)
                                                                 CCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATAC                              <  SRR4302540.8873017/94‑1 (MQ=60)
                                                                 CCTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATAC                              >  SRR4302540.8411717/1‑94 (MQ=60)
                                                                  CTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACG                             >  SRR4302540.2672368/1‑94 (MQ=60)
                                                                  CTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACG                             >  SRR4302540.1863656/1‑94 (MQ=60)
                                                                  CTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACG                             >  SRR4302540.5408021/1‑94 (MQ=60)
                                                                  CTCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTNTNATTCTTCGTTGGCTCCATACG                             >  SRR4302540.2672369/1‑94 (MQ=60)
                                                                   TCTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGT                            <  SRR4302540.2392406/94‑1 (MQ=60)
                                                                    CTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTG                           >  SRR4302540.1791677/1‑94 (MQ=60)
                                                                    CTCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTG                           >  SRR4302540.5598175/1‑94 (MQ=60)
                                                                     TCTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGT                          >  SRR4302540.7780937/1‑94 (MQ=60)
                                                                      CTCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTC                         >  SRR4302540.138920/1‑94 (MQ=60)
                                                                       TCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCT                        >  SRR4302540.4334802/1‑94 (MQ=60)
                                                                       TCATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCT                        >  SRR4302540.1717921/1‑94 (MQ=60)
                                                                        CATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTT                       >  SRR4302540.3208742/1‑94 (MQ=60)
                                                                         ATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTG                      >  SRR4302540.2002453/1‑94 (MQ=60)
                                                                         ATTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTG                      >  SRR4302540.4896492/1‑94 (MQ=60)
                                                                         ATTCAGGACATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTG                      >  SRR4302540.1821308/1‑94 (MQ=60)
                                                                          TTCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATGAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGC                     >  SRR4302540.7239003/1‑94 (MQ=60)
                                                                           TCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCT                    <  SRR4302540.976492/94‑1 (MQ=60)
                                                                           TCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCT                    >  SRR4302540.5458085/1‑94 (MQ=60)
                                                                           TCAGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCT                    >  SRR4302540.5710213/1‑94 (MQ=60)
                                                                            CAGGGCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTA                   >  SRR4302540.534489/1‑94 (MQ=60)
                                                                             AGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTAC                  >  SRR4302540.1495824/1‑94 (MQ=60)
                                                                             AGGTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTAC                  <  SRR4302540.988045/94‑1 (MQ=60)
                                                                              GGTCATTTATATTAGCCCTTGGCGATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACA                 >  SRR4302540.2174837/1‑94 (MQ=60)
                                                                               GTCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACAT                <  SRR4302540.9376253/94‑1 (MQ=60)
                                                                                TCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATC               >  SRR4302540.3484718/1‑94 (MQ=60)
                                                                                TCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATC               >  SRR4302540.4395838/1‑94 (MQ=60)
                                                                                TCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATC               <  SRR4302540.1778360/94‑1 (MQ=60)
                                                                                TCATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATC               <  SRR4302540.1778359/94‑1 (MQ=60)
                                                                                  ATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCAC             >  SRR4302540.5353495/1‑94 (MQ=60)
                                                                                  ATTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCAC             >  SRR4302540.2317925/1‑94 (MQ=60)
                                                                                   TTTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACT            <  SRR4302540.6232177/94‑1 (MQ=60)
                                                                                    TTATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTG           >  SRR4302540.1910659/1‑94 (MQ=60)
                                                                                     TATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGT          <  SRR4302540.2660859/94‑1 (MQ=60)
                                                                                      ATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTTGCTCCATACGTGTCTTGCTACATCACTGTT         >  SRR4302540.5605125/1‑94 (MQ=60)
                                                                                      ATATTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTT         >  SRR4302540.5605127/1‑94 (MQ=60)
                                                                                         TTAGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTTCAG      <  SRR4302540.2930106/94‑1 (MQ=60)
                                                                                           AGCCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTTCAGGA    <  SRR4302540.4057714/94‑1 (MQ=60)
                                                                                             CCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTTCAGGAGC  >  SRR4302540.6102472/1‑94 (MQ=60)
                                                                                             CCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTTCAGGAGC  >  SRR4302540.6113201/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGGTGCTGCCTCTCTCATTCAGGTCATTTATATTAGTCCTTGGCTATTTCGGTTATATTAAATAAGAACTCTATAAATTTTTATTCTTCGTTGGCTCCATACGTGTCTTGCTACATCACTGTTCAGGAGC  >  NC_000913/4075976‑4076162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑