Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,080,195	A→G	C49R (TGT→CGT)	fdoH ←	formate dehydrogenase‑O, iron‑sulfur subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,080,195	0	A	G	100.0%	1332.0 / NA	414	C49R (TGT→CGT)	fdoH	formate dehydrogenase‑O, iron‑sulfur subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (221/193); total (221/193)

Only 100 of 444 total aligned reads displayed.

CCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG  >  NC_000913/4080105‑4080284

 cGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACgcgc                                                                                        <  2:7684537/93‑1 (MQ=255)

 cGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACgcgc                                                                                        >  2:9582655/1‑93 (MQ=255)

  gTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGcc                                                                                       >  2:6278422/1‑93 (MQ=255)

  gTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGcc                                                                                       <  2:2356754/93‑1 (MQ=255)

   tCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGGCa                                                                                      >  2:6112572/1‑93 (MQ=255)

   tCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGGCa                                                                                      >  2:5299501/1‑93 (MQ=255)

   tCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCa                                                                                      >  2:9175802/1‑93 (MQ=255)

   tCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCa                                                                                      >  2:5545808/1‑93 (MQ=255)

   tCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCa                                                                                      >  2:1354297/1‑93 (MQ=255)

    ccACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAc                                                                                     <  2:1474264/93‑1 (MQ=255)

    ccACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAc                                                                                     <  1:2022505/93‑1 (MQ=255)

    ccACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAc                                                                                     <  2:7837712/93‑1 (MQ=255)

     cACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAcc                                                                                    <  2:2651522/93‑1 (MQ=255)

         aTTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAc                                                                                <  2:404074/93‑1 (MQ=255)

          tttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACa                                                                               >  1:4219437/1‑93 (MQ=255)

          tttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACa                                                                               <  1:1867238/93‑1 (MQ=255)

          tttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACa                                                                               <  1:1019130/93‑1 (MQ=255)

           ttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAg                                                                              <  1:15650/93‑1 (MQ=255)

            tGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAgg                                                                             >  2:7214086/1‑93 (MQ=255)

             ggCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGc                                                                            >  2:3306893/1‑93 (MQ=255)

               cgcTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCtt                                                                          <  1:2247055/93‑1 (MQ=255)

                gcTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCttt                                                                         >  2:8939187/1‑93 (MQ=255)

                gcTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCttt                                                                         <  1:5979778/93‑1 (MQ=255)

                 cTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTa                                                                        <  1:6207857/93‑1 (MQ=255)

                  ttAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAc                                                                       >  2:7553764/1‑93 (MQ=255)

                  ttAAATCATTGGGGTTGTCATACACCCCAATGTTATTGCCGACAGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTaa                                                                       <  2:8966559/93‑2 (MQ=38)

                   tAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACa                                                                      >  2:9238848/1‑93 (MQ=255)

                      aTCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGcc                                                                   >  2:7428131/1‑93 (MQ=255)

                       tCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCg                                                                  <  2:1804130/93‑1 (MQ=255)

                        cATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACCGCCGa                                                                 >  2:1677158/1‑93 (MQ=255)

                        cATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGa                                                                 <  1:3184073/93‑1 (MQ=255)

                           tGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATAc                                                              >  2:282283/1‑93 (MQ=255)

                             gggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAg                                                            >  1:2336691/1‑93 (MQ=255)

                               gTTGTCGTACTCCCCAATGTTATTGCCGGCGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggt                                                          <  2:1042689/93‑1 (MQ=255)

                               gTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggt                                                          <  1:2824472/93‑1 (MQ=255)

                                ttGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggtg                                                         >  1:4598391/1‑93 (MQ=255)

                                ttGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggtg                                                         >  2:8027068/1‑93 (MQ=255)

                                ttGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggtg                                                         >  2:5657434/1‑93 (MQ=255)

                                 tGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggggg                                                        >  2:8307763/1‑93 (MQ=255)

                                   tCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTa                                                      >  1:7280437/1‑93 (MQ=255)

                                     gTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAc                                                    <  1:4652600/93‑1 (MQ=255)

                                       acacCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGt                                                  <  1:7055783/93‑1 (MQ=255)

                                        cacCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTc                                                 >  2:8707280/1‑93 (MQ=255)

                                        cacCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTc                                                 >  2:3454959/1‑93 (MQ=255)

                                           cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAt                                              <  1:6422241/93‑1 (MQ=255)

                                            ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATg                                             <  1:8051395/93‑1 (MQ=255)

                                               aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGt                                          <  1:5038865/93‑1 (MQ=255)

                                               aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGt                                          >  1:2928698/1‑93 (MQ=255)

                                                tGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGtt                                         >  1:7835298/1‑93 (MQ=255)

                                                 tttATTTCCGACGGTATCTCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGttt                                        <  1:1368409/92‑1 (MQ=18)

                                                 gTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGttt                                        >  1:9504862/1‑93 (MQ=255)

                                                 gTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGttt                                        >  2:4835624/1‑93 (MQ=255)

                                                   tATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCg                                      >  1:3423315/1‑93 (MQ=255)

                                                    aTTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGc                                     <  1:5022237/93‑1 (MQ=255)

                                                      tGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCa                                   <  1:7961433/93‑1 (MQ=255)

                                                         cGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActt                                <  2:1872843/93‑1 (MQ=255)

                                                         cGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActt                                <  1:6957423/93‑1 (MQ=255)

                                                         cGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActt                                <  1:9618510/93‑1 (MQ=255)

                                                          gACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtt                               >  1:8196245/1‑92 (MQ=255)

                                                          gACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtc                               >  2:1537911/1‑93 (MQ=255)

                                                          gACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtc                               >  2:6989992/1‑93 (MQ=255)

                                                          gACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtc                               <  1:8416600/93‑1 (MQ=255)

                                                           aCGGTATCGCGAATGTCGTTCCACTCTGACCGCGCCACCTGACAGTCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtct                              <  2:3774793/93‑1 (MQ=255)

                                                           aCGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtct                              >  2:9392324/1‑93 (MQ=255)

                                                           aCGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtct                              <  2:440353/93‑1 (MQ=255)

                                                           aCGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtct                              >  1:2976754/1‑93 (MQ=255)

                                                           aCGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtct                              >  1:9755021/1‑93 (MQ=255)

                                                           aCGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtct                              >  2:1072230/1‑93 (MQ=255)

                                                             ggTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACttcttc                            >  2:2911024/1‑93 (MQ=255)

                                                              gTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc                           >  1:436280/1‑93 (MQ=255)

                                                              gTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc                           >  2:9711426/1‑93 (MQ=255)

                                                              gTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc                           >  2:1295211/1‑93 (MQ=255)

                                                               tATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCt                          <  1:9836936/93‑1 (MQ=255)

                                                                aTCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTg                         >  2:9808593/1‑93 (MQ=255)

                                                                aTCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTg                         <  2:681065/93‑1 (MQ=255)

                                                                 tCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTgg                        <  2:6721876/93‑1 (MQ=255)

                                                                 tCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTgg                        >  2:5896941/1‑93 (MQ=255)

                                                                 tCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTgg                        >  1:9321131/1‑93 (MQ=255)

                                                                 tCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTgg                        <  1:5230382/93‑1 (MQ=255)

                                                                   gcgAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGaa                      >  2:7043237/1‑93 (MQ=255)

                                                                   gcgAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGaa                      >  2:6678800/1‑93 (MQ=255)

                                                                     gAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGt                    >  2:3164830/1‑93 (MQ=255)

                                                                      aaTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTc                   >  2:5788796/1‑93 (MQ=255)

                                                                      aaTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTc                   >  1:883498/1‑93 (MQ=255)

                                                                      aaTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTc                   <  1:4117826/93‑1 (MQ=255)

                                                                       agatCGTTCCACTCTGAACTCGGCGTGTGACAGTCTTTACAGCCGTGACAGGTGGTAACGTCGATGAGTTTCGCCGCTTCTTCCTGGAAGTcc                  <  2:4528975/90‑1 (MQ=255)

                                                                       aTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTcc                  >  2:8138967/1‑93 (MQ=255)

                                                                       aTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCAATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTcc                  <  2:4295183/93‑1 (MQ=255)

                                                                        tGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTccc                 >  2:8567026/1‑93 (MQ=255)

                                                                            gTTCCACTCTGAACGCGCCACCTGACAGGATTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCgcgc             >  1:263763/1‑93 (MQ=255)

                                                                             ttCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGcc            >  1:9086888/1‑93 (MQ=255)

                                                                             ttCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGcc            >  1:6739473/1‑93 (MQ=255)

                                                                             ttCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGcc            >  1:7630234/1‑93 (MQ=255)

                                                                             ttCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGcc            <  2:2131600/93‑1 (MQ=255)

                                                                              tCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGccg           >  2:5076029/1‑92 (MQ=255)

                                                                                 cctctGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAg        <  1:5502997/92‑1 (MQ=255)

                                                                                 aCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAg        <  2:7929220/93‑1 (MQ=255)

                                                                                 aCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAg        >  1:3952385/1‑93 (MQ=255)

                                                                                   tctGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgc      >  1:578498/1‑93 (MQ=255)

                                                                                     tGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgcgc    >  2:9081056/1‑93 (MQ=255)

CCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG  >  NC_000913/4080105‑4080284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.

TTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGG  >  NC_000913/4080102‑4080286

TTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACG                                                                                             >  SRR4302540.2888852/1‑94 (MQ=60)

TTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACG                                                                                             <  SRR4302540.9108332/94‑1 (MQ=60)

TTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACG                                                                                             >  SRR4302540.7585125/1‑94 (MQ=60)

 TACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGC                                                                                            <  SRR4302540.9095854/94‑1 (MQ=60)

  ACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCG                                                                                           <  SRR4302540.5782597/94‑1 (MQ=60)

   CCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGC                                                                                          >  SRR4302540.8114560/1‑94 (MQ=60)

   CCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGC                                                                                          >  SRR4302540.7210064/1‑94 (MQ=60)

    CGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCC                                                                                         >  SRR4302540.2210866/1‑94 (MQ=60)

     GTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCA                                                                                        >  SRR4302540.2868736/1‑94 (MQ=60)

       CCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACC                                                                                      >  SRR4302540.5147900/1‑94 (MQ=60)

       CCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACC                                                                                      <  SRR4302540.2044364/94‑1 (MQ=60)

       CCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACC                                                                                      >  SRR4302540.7526412/1‑94 (MQ=60)

       CCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACC                                                                                      >  SRR4302540.4164323/1‑94 (MQ=60)

        CACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCT                                                                                     >  SRR4302540.8372729/1‑94 (MQ=60)

        CACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCT                                                                                     >  SRR4302540.5742521/1‑94 (MQ=60)

           GATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAC                                                                                  >  SRR4302540.5781516/1‑94 (MQ=60)

           GATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAC                                                                                  >  SRR4302540.961977/1‑94 (MQ=60)

            GTTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACA                                                                                 <  SRR4302540.7862478/94‑1 (MQ=60)

            ATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACA                                                                                 >  SRR4302540.4265373/1‑94 (MQ=60)

            ATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACA                                                                                 <  SRR4302540.7933110/94‑1 (MQ=60)

            ATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACA                                                                                 >  SRR4302540.2983520/1‑94 (MQ=60)

             TTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAG                                                                                <  SRR4302540.1887697/94‑1 (MQ=60)

             TTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAG                                                                                <  SRR4302540.1029474/94‑1 (MQ=60)

             TTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAG                                                                                <  SRR4302540.4695947/94‑1 (MQ=60)

              TTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGG                                                                               >  SRR4302540.820264/1‑94 (MQ=60)

              TTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGG                                                                               <  SRR4302540.15827/94‑1 (MQ=60)

               TGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGC                                                                              <  SRR4302540.1729306/94‑1 (MQ=60)

                GGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGCACGCGCCACCTGACAGGCT                                                                             >  SRR4302540.1309251/1‑94 (MQ=60)

                GGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCT                                                                             >  SRR4302540.2160344/1‑94 (MQ=60)

                 GCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTT                                                                            >  SRR4302540.412421/1‑94 (MQ=60)

                 GCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTT                                                                            <  SRR4302540.5775147/94‑1 (MQ=60)

                  GGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTT                                                                           <  SRR4302540.2271193/94‑1 (MQ=60)

                  CGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTT                                                                           <  SRR4302540.10005979/94‑1 (MQ=60)

                  CGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTT                                                                           <  SRR4302540.2271192/94‑1 (MQ=60)

                   GCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTA                                                                          <  SRR4302540.6045983/94‑1 (MQ=60)

                   GCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTA                                                                          >  SRR4302540.9803643/1‑94 (MQ=60)

                   GCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTA                                                                          >  SRR4302540.2516418/1‑94 (MQ=60)

                    CTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAC                                                                         <  SRR4302540.9108161/94‑1 (MQ=60)

                    CTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAC                                                                         <  SRR4302540.6276951/94‑1 (MQ=60)

                    CTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAC                                                                         <  SRR4302540.8064592/94‑1 (MQ=60)

                     TTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACA                                                                        >  SRR4302540.4531651/1‑94 (MQ=60)

                     TTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACA                                                                        >  SRR4302540.9641924/1‑94 (MQ=60)

                     TTAAAGCATTGGGGTTGTGGTTCACCCCAATATTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACA                                                                        <  SRR4302540.3603377/94‑1 (MQ=60)

                     TGAAATCATTGGGGTTGTCCTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCCCTCTGAACGCGCCACCTGACAGGCTTTACA                                                                        <  SRR4302540.9893942/94‑1 (MQ=60)

                      TAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAG                                                                       <  SRR4302540.4829302/94‑1 (MQ=60)

                        AATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCC                                                                     <  SRR4302540.6809246/94‑1 (MQ=60)

                          TCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGA                                                                   >  SRR4302540.2568486/1‑94 (MQ=60)

                           CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT                                                                  >  SRR4302540.2966666/1‑94 (MQ=60)

                           CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT                                                                  <  SRR4302540.4344482/94‑1 (MQ=60)

                           CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT                                                                  <  SRR4302540.3218668/94‑1 (MQ=60)

                           CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT                                                                  <  SRR4302540.3175676/94‑1 (MQ=60)

                            ATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATA                                                                 <  SRR4302540.9673838/94‑1 (MQ=60)

                              TGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACA                                                               >  SRR4302540.3401150/1‑94 (MQ=60)

                              TGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACA                                                               <  SRR4302540.627211/94‑1 (MQ=60)

                              TGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACA                                                               >  SRR4302540.1904527/1‑94 (MQ=60)

                               TGGGTTGTCGTACACCCCAATGTTATTGCCGACGCTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                              <  SRR4302540.890194/94‑1 (MQ=60)

                               GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                              <  SRR4302540.3354009/94‑1 (MQ=60)

                               GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                              >  SRR4302540.2361872/1‑94 (MQ=60)

                               GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                              <  SRR4302540.4516218/94‑1 (MQ=60)

                                GGGTTGTCGTACCCCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGG                                                             <  SRR4302540.876181/94‑1 (MQ=60)

                                GGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGCTATAGG                                                             >  SRR4302540.5077199/1‑94 (MQ=60)

                                GGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGG                                                             >  SRR4302540.5077200/1‑94 (MQ=60)

                                GGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGG                                                             <  SRR4302540.7229465/94‑1 (MQ=60)

                                GGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGG                                                             <  SRR4302540.10092232/94‑1 (MQ=60)

                                GGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGG                                                             <  SRR4302540.3900871/94‑1 (MQ=60)

                                GGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGG                                                             >  SRR4302540.6826017/1‑94 (MQ=60)

                                 GGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGT                                                            >  SRR4302540.2703193/1‑94 (MQ=60)

                                 GGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGT                                                            >  SRR4302540.9399822/1‑94 (MQ=60)

                                  GTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTG                                                           >  SRR4302540.4647828/1‑94 (MQ=60)

                                  GTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTG                                                           <  SRR4302540.2854991/94‑1 (MQ=60)

                                     GTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTA                                                        >  SRR4302540.3390875/1‑94 (MQ=60)

                                     GTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTA                                                        >  SRR4302540.7361674/1‑94 (MQ=60)

                                      TCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAA                                                       <  SRR4302540.9745021/94‑1 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                     <  SRR4302540.4702389/94‑1 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                     <  SRR4302540.2683687/94‑1 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                     <  SRR4302540.5254839/94‑1 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                     >  SRR4302540.4308281/1‑94 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                     >  SRR4302540.7874260/1‑94 (MQ=60)

                                         TACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGT                                                    <  SRR4302540.7987485/94‑1 (MQ=60)

                                          ACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTC                                                   >  SRR4302540.1190573/1‑94 (MQ=60)

                                          ACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTC                                                   <  SRR4302540.7134248/94‑1 (MQ=60)

                                           CACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCG                                                  <  SRR4302540.2997972/94‑1 (MQ=60)

                                           CACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCG                                                  >  SRR4302540.6823375/1‑94 (MQ=60)

                                            ACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTCACGTCGA                                                 >  SRR4302540.7791403/1‑94 (MQ=60)

                                            ACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGA                                                 >  SRR4302540.2721144/1‑94 (MQ=60)

                                            ACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGA                                                 >  SRR4302540.314224/1‑94 (MQ=60)

                                             CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAT                                                <  SRR4302540.2275875/94‑1 (MQ=60)

                                             CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAG                                                >  SRR4302540.2053982/1‑94 (MQ=60)

                                              CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG                                               >  SRR4302540.1789281/1‑94 (MQ=60)

                                              CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG                                               <  SRR4302540.6356179/94‑1 (MQ=60)

                                              CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG                                               <  SRR4302540.6493722/94‑1 (MQ=60)

                                              CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG                                               <  SRR4302540.9347095/94‑1 (MQ=60)

                                               CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGA                                              <  SRR4302540.8144909/94‑1 (MQ=60)

                                                CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAG                                             >  SRR4302540.9556402/1‑94 (MQ=60)

                                                 AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                            >  SRR4302540.2960813/1‑94 (MQ=60)

                                                 AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                            >  SRR4302540.2523609/1‑94 (MQ=60)

                                                  ATGTTATTGTCGACGGTATCGCGAATGTCGTTCGACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                           <  SRR4302540.5093371/94‑1 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                           <  SRR4302540.6707715/94‑1 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                           <  SRR4302540.5093372/94‑1 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                           <  SRR4302540.8393658/94‑1 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                           <  SRR4302540.8400941/94‑1 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                           >  SRR4302540.7926846/1‑94 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                           >  SRR4302540.6105307/1‑94 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCCTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                           >  SRR4302540.5993913/1‑94 (MQ=60)

                                                   TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT                                          >  SRR4302540.9617473/1‑94 (MQ=60)

                                                   TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT                                          <  SRR4302540.1516770/94‑1 (MQ=60)

                                                   TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAAAGCCGATACAGGTGGTAACGTCGATGAGTTT                                          <  SRR4302540.8686945/94‑1 (MQ=60)

                                                   TGTTATTGCCGACGGGATCGCGAATTTCGTTCCAATCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT                                          <  SRR4302540.5328593/94‑1 (MQ=60)

                                                    TTTATTTCCGACGGTATCTCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                         <  SRR4302540.1382902/94‑1 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                         <  SRR4302540.2932244/94‑1 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                         <  SRR4302540.8260084/94‑1 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                         <  SRR4302540.4828468/94‑1 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                         >  SRR4302540.6083558/1‑94 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                         <  SRR4302540.969889/94‑1 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                         <  SRR4302540.1382904/94‑1 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                        >  SRR4302540.6482950/1‑94 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                        >  SRR4302540.3000967/1‑94 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                        >  SRR4302540.3460535/1‑94 (MQ=60)

                                                      TATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGC                                       >  SRR4302540.2311984/1‑94 (MQ=60)

                                                      TATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGC                                       >  SRR4302540.1862804/1‑94 (MQ=60)

                                                      TATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAAGAGTTTCGC                                       >  SRR4302540.10004323/1‑94 (MQ=60)

                                                       ATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACATGTGGTAACGTCGATGAGTTTCGCC                                      >  SRR4302540.7858665/1‑94 (MQ=60)

                                                       ATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCC                                      <  SRR4302540.5076602/94‑1 (MQ=60)

                                                         TGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCAC                                    <  SRR4302540.8054216/94‑1 (MQ=60)

                                                         TGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCAC                                    <  SRR4302540.7087953/94‑1 (MQ=60)

                                                          gccggcggaaagcCGAATGTCGTTCCACTATGAACTCGCCTCCCGACAGGCTTTACAGCCGATACAGGTAGTAACGTCGATGAGTTTCGCCACT                                   <  SRR4302540.8232439/81‑1 (MQ=54)

                                                           CCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTT                                  >  SRR4302540.6436580/1‑94 (MQ=60)

                                                           CCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTT                                  >  SRR4302540.6975705/1‑94 (MQ=60)

                                                            CGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTT                                 >  SRR4302540.8291494/1‑94 (MQ=60)

                                                            CGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTC                                 <  SRR4302540.9731898/94‑1 (MQ=60)

                                                            CGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTC                                 <  SRR4302540.7034826/94‑1 (MQ=60)

                                                             GACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCT                                >  SRR4302540.3009649/1‑94 (MQ=60)

                                                             GACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCT                                <  SRR4302540.9590191/94‑1 (MQ=60)

                                                             GACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCT                                >  SRR4302540.9869467/1‑94 (MQ=60)

                                                             GACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCT                                <  SRR4302540.8514293/94‑1 (MQ=60)

                                                              ACGGTATCGCGAATGTCGTTCCACTCTGAACGCCCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCACCTTCTT                               >  SRR4302540.2884858/1‑94 (MQ=60)

                                                                GGTATCGCGAATGTCGTTCCACTCTGACCGCGCCCCCTGACAGGCTTGACAGCCGATACAGGTGTTAACGTCGATGAGTTTCGCCACTTCTTCC                             <  SRR4302540.1852024/94‑1 (MQ=60)

                                                                GGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCC                             <  SRR4302540.1852025/94‑1 (MQ=60)

                                                                GGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCC                             >  SRR4302540.440905/1‑94 (MQ=60)

                                                                GGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCC                             >  SRR4302540.5432980/1‑94 (MQ=60)

                                                                 GTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCT                            >  SRR4302540.8627384/1‑94 (MQ=60)

                                                                  TATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTG                           <  SRR4302540.6790418/94‑1 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                          >  SRR4302540.8150248/1‑94 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                          >  SRR4302540.9432342/1‑94 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                          >  SRR4302540.2058071/1‑94 (MQ=60)

                                                                   ATCGCGAATGTCGTTCACCTCTGCACGCGCCACCTGACAGGATTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCCCTTCTTCCTAG                          <  SRR4302540.9095738/94‑1 (MQ=51)

                                                                    TCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGA                         <  SRR4302540.129079/94‑1 (MQ=60)

                                                                    TCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGA                         <  SRR4302540.5287422/94‑1 (MQ=60)

                                                                    TCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGA                         >  SRR4302540.5263249/1‑94 (MQ=60)

                                                                     CGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAA                        >  SRR4302540.4331591/1‑94 (MQ=60)

                                                                     CGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAA                        >  SRR4302540.9470257/1‑94 (MQ=60)

                                                                      GCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAG                       >  SRR4302540.3091375/1‑94 (MQ=60)

                                                                      GCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAG                       <  SRR4302540.5742514/94‑1 (MQ=60)

                                                                      GCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAG                       <  SRR4302540.6100734/94‑1 (MQ=60)

                                                                      GCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAG                       <  SRR4302540.4496738/94‑1 (MQ=60)

                                                                      GCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGGGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAG                       >  SRR4302540.7085376/1‑94 (MQ=60)

                                                                       CGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGT                      >  SRR4302540.4693237/1‑94 (MQ=60)

                                                                       CGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGT                      <  SRR4302540.4044610/94‑1 (MQ=60)

                                                                       CGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGT                      <  SRR4302540.7162558/94‑1 (MQ=60)

                                                                        GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC                     >  SRR4302540.892871/1‑94 (MQ=60)

                                                                        GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC                     >  SRR4302540.8165477/1‑94 (MQ=60)

                                                                        GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC                     >  SRR4302540.9747689/1‑94 (MQ=60)

                                                                         AATTTCGTTCCCCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCC                    <  SRR4302540.7584955/94‑1 (MQ=60)

                                                                         AATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCC                    <  SRR4302540.4162286/94‑1 (MQ=60)

                                                                         AATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCC                    <  SRR4302540.1556324/94‑1 (MQ=60)

                                                                         AAGGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCC                    <  SRR4302540.6940608/94‑1 (MQ=60)

                                                                          ATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCC                   >  SRR4302540.1913485/1‑94 (MQ=60)

                                                                            GTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGC                 >  SRR4302540.7122245/1‑94 (MQ=60)

                                                                            GTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCAACTTCTTCCTGGAAGTACCGC                 >  SRR4302540.2632105/1‑94 (MQ=60)

                                                                            GTCGTTCCACACTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGC                 <  SRR4302540.4283512/94‑1 (MQ=60)

                                                                             TCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCG                >  SRR4302540.895854/1‑94 (MQ=60)

                                                                             TCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCG                >  SRR4302540.5872518/1‑94 (MQ=60)

                                                                              CGTTCCACTCTGAACGCGCCACCTGACAGGATTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGC               >  SRR4302540.266338/1‑94 (MQ=60)

                                                                               GTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCC              >  SRR4302540.802585/1‑94 (MQ=60)

                                                                               GTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCC              >  SRR4302540.7716053/1‑94 (MQ=60)

                                                                               GTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCC              >  SRR4302540.6813920/1‑94 (MQ=60)

                                                                               GTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCC              >  SRR4302540.9196053/1‑94 (MQ=60)

                                                                               GTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCC              >  SRR4302540.9902423/1‑94 (MQ=60)

                                                                                TTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCT             <  SRR4302540.1907391/94‑1 (MQ=60)

                                                                                 TCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTGTTCCTGGAAGTCgcgggcccg            >  SRR4302540.414643/1‑85 (MQ=60)

                                                                                  CCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGA           >  SRR4302540.5236402/1‑94 (MQ=60)

                                                                                   CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAG          >  SRR4302540.3995036/1‑94 (MQ=60)

                                                                                   CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAG          <  SRR4302540.3459467/94‑1 (MQ=60)

                                                                                   CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAG          <  SRR4302540.4072581/94‑1 (MQ=60)

                                                                                   CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAG          >  SRR4302540.7427693/1‑94 (MQ=60)

                                                                                    CCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGG         <  SRR4302540.5563607/94‑1 (MQ=60)

                                                                                    ACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGG         >  SRR4302540.3662103/1‑94 (MQ=60)

                                                                                     CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGGGGC        >  SRR4302540.9397119/1‑94 (MQ=60)

                                                                                     CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC        >  SRR4302540.8086244/1‑94 (MQ=60)

                                                                                     CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC        >  SRR4302540.584765/1‑94 (MQ=60)

                                                                                     CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC        >  SRR4302540.5032917/1‑94 (MQ=60)

                                                                                     CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC        <  SRR4302540.4677912/94‑1 (MQ=60)

                                                                                      TCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG       >  SRR4302540.9913077/1‑94 (MQ=60)

                                                                                       CTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCcgccgaggcgg      >  SRR4302540.7266101/1‑83 (MQ=60)

                                                                                        TGAACGCGCCCCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCG     <  SRR4302540.5979648/94‑1 (MQ=60)

                                                                                        TGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCG     >  SRR4302540.9406258/1‑94 (MQ=60)

                                                                                         GAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG    <  SRR4302540.4203262/94‑1 (MQ=60)

                                                                                         GAACGCGCCACCTGACAGGCTTGACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG    <  SRR4302540.4203258/94‑1 (MQ=60)

                                                                                          AACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGG   <  SRR4302540.4814539/94‑1 (MQ=60)

                                                                                           ACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGG  >  SRR4302540.3472715/1‑94 (MQ=60)

TTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGG  >  NC_000913/4080102‑4080286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`