Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,080,532	A→G	R957R (CGT→CGC)	fdoG ←	formate dehydrogenase‑O, major subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,080,532	0	A	G	99.8%	1606.8 / NA	490	R957R (CGT→CGC)	fdoG	formate dehydrogenase‑O, major subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (246/243); minor base C (1/0); total (247/243)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 503 total aligned reads displayed.

AAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATACGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGC  >  NC_000913/4080442‑4080621

aaaGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCg                                                                                         >  2:615799/1‑93 (MQ=255)

aaaGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCg                                                                                         >  2:915438/1‑93 (MQ=255)

aaaGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCg                                                                                         >  2:2130357/1‑93 (MQ=255)

 aaGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGt                                                                                        >  2:8491752/1‑93 (MQ=255)

  aGCCTTTTTTAGCTACGCCTTCGTAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGtt                                                                                       >  1:5803414/1‑93 (MQ=255)

  aGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGtt                                                                                       <  1:4846516/93‑1 (MQ=255)

    ccTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTg                                                                                     >  1:6688665/1‑93 (MQ=255)

     cTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTgg                                                                                    >  1:7332436/1‑93 (MQ=255)

      ttttttAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGt                                                                                   <  1:5453403/93‑1 (MQ=255)

        ttttAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTca                                                                                 >  1:6236278/1‑93 (MQ=255)

         tttAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcac                                                                                >  2:4701909/1‑93 (MQ=255)

          ttAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcacc                                                                               <  1:7232966/93‑1 (MQ=255)

           tAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcacca                                                                              <  2:7703292/93‑1 (MQ=255)

            aGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcaccac                                                                             <  2:1471973/93‑1 (MQ=255)

            aGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcaccac                                                                             >  1:386697/1‑93 (MQ=255)

             gCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCaccacc                                                                            >  1:4799861/1‑93 (MQ=255)

             gCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCaccacc                                                                            >  2:553625/1‑93 (MQ=255)

             gCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTCGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCaccacc                                                                            <  2:4409523/93‑1 (MQ=255)

               tACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTTCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgc                                                                          >  1:4408221/1‑93 (MQ=255)

               tACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgc                                                                          >  2:2534668/1‑93 (MQ=255)

                aCGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgct                                                                         <  1:1142870/93‑1 (MQ=255)

                aCGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgct                                                                         >  2:7991266/1‑93 (MQ=255)

                 cGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctt                                                                        <  1:9804780/93‑1 (MQ=255)

                   gcTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttg                                                                      <  1:7128177/92‑1 (MQ=255)

                   ccTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttg                                                                      >  2:3204605/1‑93 (MQ=255)

                   ccTTCATAGCCCCAGTGAAGCGGAATGCCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttg                                                                      <  1:3494832/93‑1 (MQ=255)

                     ttCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggc                                                                    >  1:529222/1‑93 (MQ=255)

                     ttCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggc                                                                    >  2:8801889/1‑93 (MQ=255)

                      tCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggct                                                                   >  1:602807/1‑93 (MQ=255)

                        aTAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggcttt                                                                 <  1:2361426/93‑1 (MQ=255)

                           gCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGat                                                              <  2:6066520/93‑1 (MQ=255)

                           gCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGat                                                              <  1:3170367/93‑1 (MQ=255)

                            ccccAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGata                                                             <  2:6467150/93‑1 (MQ=255)

                            ccccAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGata                                                             <  1:7759298/93‑1 (MQ=255)

                             cccAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGatat                                                            <  2:6234656/93‑1 (MQ=255)

                              ccAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGAtata                                                           >  2:5640928/1‑93 (MQ=255)

                               cAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAg                                                          >  1:5049723/1‑93 (MQ=255)

                                aGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGc                                                         >  1:10003620/1‑93 (MQ=255)

                                 gTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGcc                                                        >  1:7420955/1‑93 (MQ=255)

                                 gTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGcc                                                        >  2:5885133/1‑93 (MQ=255)

                                 gTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGcc                                                        <  2:9594642/93‑1 (MQ=255)

                                   gAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCAc                                                      <  2:731645/93‑1 (MQ=255)

                                     aTCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACgg                                                    <  1:1399699/93‑1 (MQ=255)

                                      tCGGAATACCGATGGTATCGATATCTTTGCCGTTCTCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGt                                                   <  1:5908962/93‑1 (MQ=255)

                                      tCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGt                                                   <  2:1741560/93‑1 (MQ=255)

                                        ggAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTg                                                 <  2:1018077/93‑1 (MQ=255)

                                         gAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTgg                                                <  2:1658034/93‑1 (MQ=255)

                                          aaTACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTgga                                               <  1:6933877/93‑1 (MQ=255)

                                           aTACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTggag                                              <  1:964653/93‑1 (MQ=255)

                                            tACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTggagg                                             <  1:5564577/93‑1 (MQ=255)

                                            tACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTggagg                                             >  2:7847913/1‑93 (MQ=255)

                                               cGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGgaga                                          <  2:3692326/93‑1 (MQ=255)

                                               cGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGgaga                                          <  1:3052972/93‑1 (MQ=255)

                                               cGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGgaga                                          <  1:1252360/93‑1 (MQ=255)

                                                gATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGAc                                         >  1:7958434/1‑93 (MQ=255)

                                                 aTGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACt                                        >  1:4521383/1‑93 (MQ=255)

                                                  tGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACtt                                       <  1:8392686/93‑1 (MQ=255)

                                                   ggTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACttt                                      <  1:9429371/93‑1 (MQ=255)

                                                   ggTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACttt                                      <  1:3605646/93‑1 (MQ=255)

                                                    gTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTc                                     <  2:6592203/93‑1 (MQ=255)

                                                    gTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTc                                     >  1:3322447/1‑93 (MQ=255)

                                                     tATCGATATCTTTGCCGTTCGCTTTCAGCGGGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCa                                    >  1:6491184/1‑93 (MQ=255)

                                                       tCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACg                                  >  1:7567082/1‑93 (MQ=255)

                                                         gATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGt                                >  2:4243769/1‑93 (MQ=255)

                                                          atatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTa                               >  1:2856519/1‑93 (MQ=255)

                                                          atatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTa                               <  2:8606799/93‑1 (MQ=255)

                                                          atatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTa                               <  1:3738574/93‑1 (MQ=255)

                                                          atatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTa                               <  2:410344/93‑1 (MQ=255)

                                                           tatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAt                              >  1:4967982/1‑93 (MQ=255)

                                                           tatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAt                              <  2:5990182/93‑1 (MQ=255)

                                                            atCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATc                             <  1:8174596/93‑1 (MQ=255)

                                                            atCTTTGCCATTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATc                             <  1:8475441/93‑1 (MQ=255)

                                                             tCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCg                            <  1:7483725/93‑1 (MQ=255)

                                                             tCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCg                            >  1:8858739/1‑93 (MQ=255)

                                                             tCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCg                            <  2:4930867/93‑1 (MQ=255)

                                                             tCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGGATCg                            >  1:4037938/1‑93 (MQ=255)

                                                                ttGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGccc                         >  2:9289457/1‑93 (MQ=255)

                                                                ttGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGccc                         <  2:817781/93‑1 (MQ=255)

                                                                 tGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCt                        <  2:3528352/93‑1 (MQ=255)

                                                                 tGCCGTGCGCTTTCAGCGTGCGAATGCGTTCGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCt                        <  1:155958/93‑1 (MQ=255)

                                                                  gCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTg                       >  2:6787218/1‑93 (MQ=255)

                                                                   ccGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTgg                      >  1:3109343/1‑93 (MQ=255)

                                                                    cGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTggg                     >  2:1962071/1‑93 (MQ=255)

                                                                    cGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTggg                     <  1:8723039/93‑1 (MQ=255)

                                                                      ttCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCa                                                       >  1:9181443/1‑57 (MQ=255)

                                                                      ttCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCa                   >  2:2352416/1‑93 (MQ=255)

                                                                      ttCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCa                   >  1:5108074/1‑93 (MQ=255)

                                                                       tCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCaa                  >  2:5415804/1‑93 (MQ=255)

                                                                           tttCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGcc              >  2:5127159/1‑93 (MQ=255)

                                                                           tttCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGcc              >  2:2639908/1‑93 (MQ=255)

                                                                             tCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCaa            >  2:1298181/1‑93 (MQ=255)

                                                                             tCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGAAGACTTTCACGGTATCGCCCTGGGCAATGCCaa            >  2:8334378/1‑93 (MQ=255)

                                                                               aGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGt          >  1:9330258/1‑93 (MQ=255)

                                                                                  gTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGATACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTa       <  1:2128527/93‑1 (MQ=255)

                                                                                  gTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTa       <  2:7052398/93‑1 (MQ=255)

                                                                                    gCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGTTATCGCCCTGGGCAATGCCAAGTTTAtt     <  1:4161028/93‑1 (MQ=255)

                                                                                    gCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTAtt     <  2:2835264/93‑1 (MQ=255)

                                                                                    gCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTAtt     <  1:6809148/93‑1 (MQ=255)

                                                                                    gCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCACTGGGCAATGCCAAGTTTAtt     <  1:1828834/93‑1 (MQ=255)

                                                                                      gAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCg   <  1:2183597/93‑1 (MQ=255)

AAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATACGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGC  >  NC_000913/4080442‑4080621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 293 total aligned reads displayed.

AATAAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATACGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGCCAGC  >  NC_000913/4080439‑4080625

AATAAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATG                                                                                               >  SRR4302540.6312451/1‑94 (MQ=60)

 ATAAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGC                                                                                              <  SRR4302540.8546814/94‑1 (MQ=60)

 ATAAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGC                                                                                              >  SRR4302540.3178574/1‑94 (MQ=60)

   AAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGT                                                                                            <  SRR4302540.69548/94‑1 (MQ=60)

   AAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGT                                                                                            >  SRR4302540.813578/1‑94 (MQ=60)

   AAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGT                                                                                            <  SRR4302540.3090252/94‑1 (MQ=60)

    AAGCCTTTTTTAGCTACGCCTTCGTAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTT                                                                                           >  SRR4302540.5867535/1‑94 (MQ=60)

      GCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTG                                                                                         >  SRR4302540.6762513/1‑94 (MQ=60)

      GCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTG                                                                                         <  SRR4302540.8322567/94‑1 (MQ=60)

      GCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTG                                                                                         >  SRR4302540.6762514/1‑94 (MQ=60)

      GCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTG                                                                                         <  SRR4302540.7509392/94‑1 (MQ=60)

       CCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGG                                                                                        >  SRR4302540.7414286/1‑94 (MQ=60)

        CTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGCATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGC                                                                                       >  SRR4302540.9113475/1‑94 (MQ=60)

        CTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGT                                                                                       >  SRR4302540.2617198/1‑94 (MQ=60)

        CTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGT                                                                                       >  SRR4302540.1397993/1‑94 (MQ=60)

        CTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGT                                                                                       >  SRR4302540.1778463/1‑94 (MQ=60)

        CTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGT                                                                                       >  SRR4302540.725829/1‑94 (MQ=60)

         TTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTC                                                                                      <  SRR4302540.5513423/94‑1 (MQ=60)

          TTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCA                                                                                     >  SRR4302540.6305644/1‑94 (MQ=60)

            TTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACC                                                                                   <  SRR4302540.6512962/94‑1 (MQ=60)

             TTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCA                                                                                  <  SRR4302540.7313636/94‑1 (MQ=60)

             TTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCA                                                                                  <  SRR4302540.6861039/94‑1 (MQ=60)

             TTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCA                                                                                  <  SRR4302540.5357485/94‑1 (MQ=60)

              TAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCAC                                                                                 >  SRR4302540.691716/1‑94 (MQ=60)

              TAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCAC                                                                                 >  SRR4302540.390698/1‑94 (MQ=60)

               AGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACC                                                                                >  SRR4302540.3472342/1‑94 (MQ=60)

               AGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACC                                                                                >  SRR4302540.5617483/1‑94 (MQ=60)

               AGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACC                                                                                >  SRR4302540.3800073/1‑94 (MQ=60)

               AGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACC                                                                                <  SRR4302540.5413769/94‑1 (MQ=60)

               AGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACC                                                                                >  SRR4302540.4851228/1‑94 (MQ=60)

                GCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCG                                                                               <  SRR4302540.4509637/94‑1 (MQ=60)

                 CTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTTCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGC                                                                              >  SRR4302540.4456014/1‑94 (MQ=60)

                 CTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGC                                                                              >  SRR4302540.2297983/1‑94 (MQ=60)

                 CTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGC                                                                              >  SRR4302540.7838538/1‑94 (MQ=60)

                 CTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGC                                                                              >  SRR4302540.3135309/1‑94 (MQ=60)

                  TACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCT                                                                             >  SRR4302540.3043365/1‑94 (MQ=60)

                   ACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTT                                                                            >  SRR4302540.6883544/1‑94 (MQ=60)

                   ACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTT                                                                            <  SRR4302540.1331485/94‑1 (MQ=60)

                    CGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGTGTGCGAATGCGTTTGGTCACCACCGCTTT                                                                           >  SRR4302540.1912179/1‑94 (MQ=60)

                    CGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTT                                                                           <  SRR4302540.3952709/94‑1 (MQ=60)

                    CGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTT                                                                           <  SRR4302540.9919556/94‑1 (MQ=60)

                     GCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTG                                                                          >  SRR4302540.97783/1‑94 (MQ=60)

                     GCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTG                                                                          <  SRR4302540.7370041/94‑1 (MQ=60)

                      GCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGG                                                                         <  SRR4302540.7207574/94‑1 (MQ=60)

                      CCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGG                                                                         <  SRR4302540.7847952/94‑1 (MQ=60)

                       CTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGT                                                                        >  SRR4302540.8553849/1‑94 (MQ=60)

                       CTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGC                                                                        >  SRR4302540.3067646/1‑94 (MQ=60)

                       CTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGC                                                                        >  SRR4302540.534941/1‑94 (MQ=60)

                       CTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGC                                                                        >  SRR4302540.9355338/1‑94 (MQ=60)

                       CTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGC                                                                        >  SRR4302540.764399/1‑94 (MQ=60)

                        TTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCT                                                                       <  SRR4302540.366480/94‑1 (MQ=60)

                        TTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCT                                                                       >  SRR4302540.7130830/1‑94 (MQ=60)

                        TTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCT                                                                       >  SRR4302540.609262/1‑94 (MQ=60)

                        TTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCT                                                                       >  SRR4302540.609263/1‑94 (MQ=60)

                         TCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTT                                                                      <  SRR4302540.2599293/94‑1 (MQ=60)

                           ATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTG                                                                    >  SRR4302540.1183315/1‑94 (MQ=60)

                           ATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTG                                                                    <  SRR4302540.2386864/94‑1 (MQ=60)

                           ATAGCCCCAGTGAATCGGAAGACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTG                                                                    <  SRR4302540.2386863/94‑1 (MQ=60)

                            TAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGA                                                                   <  SRR4302540.7913810/94‑1 (MQ=60)

                            TAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGA                                                                   <  SRR4302540.4567859/94‑1 (MQ=60)

                             AGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGAT                                                                  >  SRR4302540.6733192/1‑94 (MQ=60)

                             AGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGAT                                                                  <  SRR4302540.8578530/94‑1 (MQ=60)

                              GCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATA                                                                 <  SRR4302540.3204831/94‑1 (MQ=60)

                              GCCCCAGTGAATCGGAATACCGATGGGATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATA                                                                 >  SRR4302540.7584759/1‑94 (MQ=60)

                               CCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATAT                                                                >  SRR4302540.7740179/1‑94 (MQ=60)

                               CCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATAT                                                                <  SRR4302540.7849964/94‑1 (MQ=60)

                                 CCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAG                                                              >  SRR4302540.8110221/1‑94 (MQ=60)

                                 CCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAG                                                              <  SRR4302540.3861219/94‑1 (MQ=60)

                                 CCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAG                                                              <  SRR4302540.3835003/94‑1 (MQ=60)

                                 CCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAG                                                              <  SRR4302540.3745160/94‑1 (MQ=60)

                                  CAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGC                                                             >  SRR4302540.973141/1‑94 (MQ=60)

                                  CAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGC                                                             >  SRR4302540.10120142/1‑94 (MQ=60)

                                  CAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGC                                                             <  SRR4302540.1089121/94‑1 (MQ=60)

                                   AGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCC                                                            <  SRR4302540.664917/94‑1 (MQ=60)

                                   AGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCC                                                            >  SRR4302540.5892610/1‑94 (MQ=60)

                                   AGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCC                                                            >  SRR4302540.7503611/1‑94 (MQ=60)

                                    GTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCA                                                           >  SRR4302540.1184478/1‑94 (MQ=60)

                                    GTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCA                                                           <  SRR4302540.5606901/94‑1 (MQ=60)

                                     TGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCAC                                                          >  SRR4302540.651837/1‑94 (MQ=60)

                                     TGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCAC                                                          <  SRR4302540.1557503/94‑1 (MQ=60)

                                      GAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACG                                                         <  SRR4302540.4286562/94‑1 (MQ=60)

                                       AATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGG                                                        <  SRR4302540.3210447/94‑1 (MQ=60)

                                       AATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGG                                                        >  SRR4302540.4983238/1‑94 (MQ=60)

                                       AATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGG                                                        >  SRR4302540.4983237/1‑94 (MQ=60)

                                        ATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGT                                                       <  SRR4302540.8040771/94‑1 (MQ=60)

                                        ATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGT                                                       <  SRR4302540.1414744/94‑1 (MQ=60)

                                        ATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGT                                                       <  SRR4302540.9489377/94‑1 (MQ=60)

                                         TCGGAATACCGATGGTATCGATATCTTTGCCGTTCTCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTT                                                      <  SRR4302540.5974243/94‑1 (MQ=60)

                                          CGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTG                                                     >  SRR4302540.7452317/1‑94 (MQ=60)

                                          CGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTG                                                     >  SRR4302540.1547804/1‑94 (MQ=60)

                                           GGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGG                                                    >  SRR4302540.3562994/1‑94 (MQ=60)

                                           GGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGG                                                    >  SRR4302540.7421883/1‑94 (MQ=60)

                                            GAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGA                                                   <  SRR4302540.2898666/94‑1 (MQ=60)

                                             AATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTTATATAGCCACGGTTGGAG                                                  <  SRR4302540.5052869/94‑1 (MQ=60)

                                             AATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAG                                                  <  SRR4302540.9008353/94‑1 (MQ=60)

                                             AATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAG                                                  <  SRR4302540.1111284/94‑1 (MQ=60)

                                             AATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAG                                                  <  SRR4302540.144714/94‑1 (MQ=60)

                                              ATGCCGGTGGTATTGATATCTTTGCCGTTCGCTTTCCGCGTGCGAATGCGTTTGGTCACCCCCGCTTTGGCTTTGATATAGCCACGGTTGGAGG                                                 <  SRR4302540.974613/94‑1 (MQ=60)

                                              ATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGG                                                 >  SRR4302540.3093433/1‑94 (MQ=60)

                                              ATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGG                                                 >  SRR4302540.10128822/1‑94 (MQ=60)

                                              ATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGG                                                 <  SRR4302540.6979832/94‑1 (MQ=60)

                                              ATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGG                                                 <  SRR4302540.453155/94‑1 (MQ=60)

                                              ATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGG                                                 >  SRR4302540.6214365/1‑94 (MQ=60)

                                              ATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTCTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGG                                                 >  SRR4302540.9902935/1‑94 (MQ=60)

                                               TACCCATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGA                                                <  SRR4302540.3326392/94‑1 (MQ=60)

                                                  CGATGTTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGAC                                             <  SRR4302540.3728677/94‑1 (MQ=60)

                                                  CGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGAC                                             <  SRR4302540.1265148/94‑1 (MQ=60)

                                                   GATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACT                                            >  SRR4302540.7524593/1‑94 (MQ=60)

                                                   GATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACT                                            >  SRR4302540.4570349/1‑94 (MQ=60)

                                                   GATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACT                                            <  SRR4302540.5892599/94‑1 (MQ=60)

                                                    ATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTT                                           >  SRR4302540.690076/1‑94 (MQ=60)

                                                    ATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTT                                           <  SRR4302540.5130913/94‑1 (MQ=60)

                                                    ATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTT                                           >  SRR4302540.5074753/1‑94 (MQ=60)

                                                     TGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTT                                          <  SRR4302540.8490086/94‑1 (MQ=60)

                                                     TGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTT                                          <  SRR4302540.8490084/94‑1 (MQ=60)

                                                      GGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTC                                         <  SRR4302540.3645048/94‑1 (MQ=60)

                                                      GGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTC                                         >  SRR4302540.3358897/1‑94 (MQ=60)

                                                       GTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCA                                        >  SRR4302540.9402807/1‑94 (MQ=60)

                                                       GTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCA                                        <  SRR4302540.663659/94‑1 (MQ=60)

                                                        TATCGATATCTTTGCCGTTCTCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCAC                                       <  SRR4302540.1645287/94‑1 (MQ=60)

                                                        TATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCAC                                       <  SRR4302540.3541209/94‑1 (MQ=60)

                                                        TATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCAC                                       <  SRR4302540.8526973/94‑1 (MQ=60)

                                                         ATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACG                                      >  SRR4302540.2109209/1‑94 (MQ=60)

                                                         ATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACG                                      >  SRR4302540.2172275/1‑94 (MQ=60)

                                                           CGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGT                                    <  SRR4302540.6462386/94‑1 (MQ=60)

                                                           CGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGT                                    >  SRR4302540.8312991/1‑94 (MQ=60)

                                                           CGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGT                                    >  SRR4302540.97495/1‑94 (MQ=60)

                                                           CGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTCGATATAGCCACGGTTGGAGGAGACTTTCACGGT                                    >  SRR4302540.3981582/1‑94 (MQ=60)

                                                            gagagCTTTGCCGGTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTA                                   <  SRR4302540.5399762/89‑1 (MQ=60)

                                                            GATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTA                                   >  SRR4302540.2887463/1‑94 (MQ=60)

                                                            GATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTA                                   <  SRR4302540.5399761/94‑1 (MQ=60)

                                                             ATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAT                                  <  SRR4302540.5673680/94‑1 (MQ=60)

                                                             ATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAT                                  <  SRR4302540.7395025/94‑1 (MQ=60)

                                                             ATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAT                                  >  SRR4302540.5021729/1‑94 (MQ=60)

                                                             ATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAT                                  <  SRR4302540.5777354/94‑1 (MQ=60)

                                                             ATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAT                                  <  SRR4302540.6060144/94‑1 (MQ=60)

                                                              TATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATC                                 <  SRR4302540.5154580/94‑1 (MQ=60)

                                                              TATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATC                                 <  SRR4302540.10010863/94‑1 (MQ=60)

                                                              TATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATC                                 >  SRR4302540.724817/1‑94 (MQ=60)

                                                              TATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATC                                 <  SRR4302540.5700106/94‑1 (MQ=60)

                                                               ATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCG                                >  SRR4302540.3476907/1‑94 (MQ=60)

                                                               ATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCG                                >  SRR4302540.8961246/1‑94 (MQ=60)

                                                               ATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCG                                <  SRR4302540.8269547/94‑1 (MQ=60)

                                                               ATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCG                                <  SRR4302540.8269548/94‑1 (MQ=60)

                                                               ATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCG                                >  SRR4302540.4081474/1‑94 (MQ=60)

                                                               ATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCG                                >  SRR4302540.9139364/1‑94 (MQ=60)

                                                               ATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGGATCG                                >  SRR4302540.4081473/1‑94 (MQ=60)

                                                               AACTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCG                                <  SRR4302540.3305203/94‑1 (MQ=60)

                                                                TCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGC                               <  SRR4302540.7567257/94‑1 (MQ=60)

                                                                  TTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCC                             >  SRR4302540.48660/1‑94 (MQ=60)

                                                                  TTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCC                             >  SRR4302540.4124923/1‑94 (MQ=60)

                                                                  TTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCC                             >  SRR4302540.3359775/1‑94 (MQ=60)

                                                                  TTTGCCGTTCGCTTTCAGCGTGCGAATCCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCC                             >  SRR4302540.5541342/1‑94 (MQ=60)

                                                                   TTGCGGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCT                            <  SRR4302540.8910702/94‑1 (MQ=60)

                                                                   TTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCT                            <  SRR4302540.9458342/94‑1 (MQ=60)

                                                                   TTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCT                            <  SRR4302540.5289525/94‑1 (MQ=60)

                                                                   TTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCT                            <  SRR4302540.7190215/94‑1 (MQ=60)

                                                                   TTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCT                            <  SRR4302540.9533733/94‑1 (MQ=60)

                                                                    TGCCGTGCGCTTTCAGCGTGCGAATGCGTTCGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTG                           <  SRR4302540.157546/94‑1 (MQ=60)

                                                                     GCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGG                          <  SRR4302540.7128480/94‑1 (MQ=60)

                                                                     GCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGG                          >  SRR4302540.7532969/1‑94 (MQ=60)

                                                                     GCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGG                          >  SRR4302540.3143365/1‑94 (MQ=60)

                                                                      TCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGG                         <  SRR4302540.2164059/94‑1 (MQ=60)

                                                                      CCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGG                         <  SRR4302540.5081325/94‑1 (MQ=60)

                                                                      CCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGG                         >  SRR4302540.3188003/1‑94 (MQ=60)

                                                                       CGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGC                        >  SRR4302540.4864904/1‑94 (MQ=60)

                                                                       CGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGC                        <  SRR4302540.8824327/94‑1 (MQ=60)

                                                                       CGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGC                        >  SRR4302540.4864906/1‑94 (MQ=60)

                                                                       CGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGC                        >  SRR4302540.2361497/1‑94 (MQ=60)

                                                                        GTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCA                       >  SRR4302540.5163367/1‑94 (MQ=60)

                                                                        GTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCA                       <  SRR4302540.9327663/94‑1 (MQ=60)

                                                                        GTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCA                       >  SRR4302540.8800128/1‑94 (MQ=60)

                                                                        GTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCA                       >  SRR4302540.1229958/1‑94 (MQ=60)

                                                                        GTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCA                       >  SRR4302540.7632612/1‑94 (MQ=60)

                                                                         TTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAA                      <  SRR4302540.8621981/94‑1 (MQ=60)

                                                                         TTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAA                      <  SRR4302540.8930636/94‑1 (MQ=60)

                                                                         TTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAA                      <  SRR4302540.5276231/94‑1 (MQ=60)

                                                                          TCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAAT                     <  SRR4302540.8027154/94‑1 (MQ=60)

                                                                           CGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATG                    <  SRR4302540.3178646/94‑1 (MQ=60)

                                                                           CGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATG                    <  SRR4302540.4377841/94‑1 (MQ=60)

                                                                           CGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATG                    >  SRR4302540.514985/1‑94 (MQ=60)

                                                                               TTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAA                >  SRR4302540.5979868/1‑94 (MQ=60)

                                                                                TCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAG               >  SRR4302540.4920484/1‑94 (MQ=60)

                                                                                 CAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGT              >  SRR4302540.9441511/1‑94 (MQ=60)

                                                                                  AGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTT             >  SRR4302540.961105/1‑94 (MQ=60)

                                                                                  AGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTT             <  SRR4302540.361783/94‑1 (MQ=60)

                                                                                   GCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTT            >  SRR4302540.4155268/1‑94 (MQ=60)

                                                                                     GTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGATACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTAT          <  SRR4302540.2151365/94‑1 (MQ=60)

                                                                                     GTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTAT          >  SRR4302540.7384297/1‑94 (MQ=60)

                                                                                       GCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGTTATCGCCCTGGGCAATGCCAAGTTTATTC        <  SRR4302540.4206127/94‑1 (MQ=60)

                                                                                       GCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTC        >  SRR4302540.4649154/1‑94 (MQ=60)

                                                                                       GCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCACTGGGCAATGCCAAGTTTATTC        <  SRR4302540.1848839/94‑1 (MQ=60)

                                                                                        CGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCG       <  SRR4302540.6469808/94‑1 (MQ=60)

                                                                                        CGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGACGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCG       >  SRR4302540.6141/1‑94 (MQ=60)

                                                                                         GAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGC      >  SRR4302540.4588448/1‑94 (MQ=60)

                                                                                         GAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGC      >  SRR4302540.4347473/1‑94 (MQ=60)

                                                                                         GAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGC      <  SRR4302540.2207166/94‑1 (MQ=60)

                                                                                          AATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGCC     >  SRR4302540.2094186/1‑94 (MQ=60)

                                                                                           ATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGCCA    <  SRR4302540.9706977/94‑1 (MQ=60)

                                                                                           ATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGCCA    >  SRR4302540.2077213/1‑94 (MQ=60)

AATAAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATACGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGCCAGC  >  NC_000913/4080439‑4080625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`