Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,081,716	A→G	F563L (TTC→CTC)	fdoG ←	formate dehydrogenase‑O, major subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,081,716	0	A	G	99.3%	1402.3 / ‑2.0	437	F563L (TTC→CTC)	fdoG	formate dehydrogenase‑O, major subunit
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (191/243); total (192/245)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.72e-01

Only 100 of 448 total aligned reads displayed.

AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT  >  NC_000913/4081626‑4081805

aGAAGTTAGAGGTTTCAGTGCTCAGTGGGTCGATGGCGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTg                                                                                         >  2:5262447/1‑93 (MQ=255)

  atgTTTGAGGGTTCAGTGTTCAGTGGGTCGATGGTGACGAGGATCTTCAGTTTCGACAGACAACCGATCACTTAGTTGTAGTTCGGGAGTGAg                                                                                       >  1:8947852/3‑93 (MQ=255)

  aaGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAg                                                                                       >  1:793350/1‑93 (MQ=255)

     ttAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCa                                                                                    >  2:616432/1‑93 (MQ=255)

       agagGTTTCAGTGTTCAGTGGGTCTATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAAc                                                                                  <  2:4437623/93‑1 (MQ=255)

       agagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAAc                                                                                  <  1:8204800/93‑1 (MQ=255)

        gagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACa                                                                                 >  1:1564824/1‑93 (MQ=255)

        gagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACa                                                                                 <  1:3152624/93‑1 (MQ=255)

        gagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACa                                                                                 <  1:3501419/93‑1 (MQ=255)

          ggTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAgg                                                                               >  2:7113419/1‑93 (MQ=255)

           gTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAggg                                                                              >  1:3641628/1‑93 (MQ=255)

            tttCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGt                                                                             >  1:8443108/1‑93 (MQ=255)

            gtgcagtgttcagtgGGTCGCTGGTGACGAGCAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGt                                                                             <  1:2055749/90‑1 (MQ=255)

               cagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaa                                                                          <  1:5201348/93‑1 (MQ=255)

               cagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaa                                                                          <  1:5865195/93‑1 (MQ=255)

               cagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaa                                                                          <  2:5407215/93‑1 (MQ=255)

               cagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaa                                                                          <  1:2973780/93‑1 (MQ=255)

                agtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaaa                                                                         <  2:7865508/93‑1 (MQ=255)

                  tgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGc                                                                       >  2:2728342/1‑93 (MQ=255)

                   gttcagtgGGTCGATGGTGAGGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGcc                                                                      >  2:165130/1‑93 (MQ=255)

                   gttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGcc                                                                      <  1:2443600/93‑1 (MQ=255)

                   gtgcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGcc                                                                      <  2:345016/90‑1 (MQ=255)

                    ttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGccc                                                                     >  1:4261021/1‑93 (MQ=255)

                    ttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGccc                                                                     <  1:1883046/93‑1 (MQ=255)

                      cagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTg                                                                   <  2:3025760/93‑1 (MQ=255)

                      cagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTg                                                                   <  2:5843867/93‑1 (MQ=255)

                      cagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTg                                                                   <  1:3973655/93‑1 (MQ=255)

                       agtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTgg                                                                  <  1:616432/93‑1 (MQ=255)

                       agtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTgg                                                                  >  2:4906526/1‑93 (MQ=255)

                       agtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGAAAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTgg                                                                  >  2:8218832/1‑93 (MQ=255)

                        gtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGc                                                                 >  2:1162271/1‑93 (MQ=255)

                        gtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGc                                                                 <  2:9692804/93‑1 (MQ=255)

                          gggTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAg                                                               <  2:9532757/93‑1 (MQ=255)

                           ggTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGa                                                              >  2:7420371/1‑93 (MQ=255)

                           ggTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGa                                                              >  2:332758/1‑93 (MQ=255)

                            gTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGat                                                             >  1:9064378/1‑93 (MQ=255)

                            gTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGat                                                             <  1:9773077/93‑1 (MQ=255)

                            gTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGat                                                             >  2:6704202/1‑93 (MQ=255)

                             tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata                                                            <  2:7668918/93‑1 (MQ=255)

                             tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata                                                            <  1:6447794/93‑1 (MQ=255)

                             tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata                                                            <  2:5528380/93‑1 (MQ=255)

                             tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata                                                            >  2:844186/1‑93 (MQ=255)

                              cGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGatat                                                           <  1:7825857/93‑1 (MQ=255)

                              cGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGatat                                                           <  1:551405/93‑1 (MQ=255)

                                aTGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAg                                                         >  1:2749982/1‑93 (MQ=255)

                                aTGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAg                                                         >  1:485064/1‑93 (MQ=255)

                                   gTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCa                                                      <  2:6981164/93‑1 (MQ=255)

                                   gTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCa                                                      <  2:4340935/93‑1 (MQ=255)

                                    tGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAt                                                     >  2:2635423/1‑93 (MQ=255)

                                    tGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAt                                                     <  2:7482527/93‑1 (MQ=255)

                                    tGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAt                                                     <  1:5894386/93‑1 (MQ=255)

                                     gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt                                                    >  2:3660110/1‑93 (MQ=255)

                                     gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt                                                    <  1:7233378/93‑1 (MQ=255)

                                     gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt                                                    >  1:3296534/1‑93 (MQ=255)

                                       cGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGa                                                  <  1:2267536/93‑1 (MQ=255)

                                       cGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGa                                                  <  2:8316993/93‑1 (MQ=255)

                                        gAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAc                                                 <  2:1409001/93‑1 (MQ=255)

                                         aGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAcc                                                <  1:1026467/93‑1 (MQ=255)

                                          ggAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCt                                               <  1:8096363/93‑1 (MQ=255)

                                          ggAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGCCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCt                                               >  1:91414/1‑93 (MQ=255)

                                             aCTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGc                                            >  2:5014866/1‑93 (MQ=255)

                                                tCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCct                                         >  1:5296037/1‑93 (MQ=255)

                                                tCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCct                                         >  2:9182703/1‑93 (MQ=255)

                                                tCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCct                                         <  2:9356575/93‑1 (MQ=255)

                                                  aGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGctctct                                       >  2:189915/1‑93 (MQ=255)

                                                  aGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCctct                                       >  2:8025063/1‑93 (MQ=255)

                                                  aGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCctct                                       >  1:130128/1‑93 (MQ=255)

                                                   gTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCtt                                      >  1:9312108/1‑93 (MQ=255)

                                                    tttCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCttt                                     <  1:3077627/93‑1 (MQ=255)

                                                    tttCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCttt                                     >  2:6352730/1‑93 (MQ=255)

                                                         acagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtcatca                                <  2:10006129/93‑1 (MQ=255)

                                                           agacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCatcatc                              <  1:1741996/93‑1 (MQ=255)

                                                            gacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAtct                             >  1:11695/1‑93 (MQ=255)

                                                             acaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAtctc                            <  1:7667943/93‑1 (MQ=255)

                                                             acaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAtctc                            <  1:9577107/93‑1 (MQ=255)

                                                               aaCCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGa                          >  2:2673140/1‑93 (MQ=255)

                                                               aaCCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGa                          >  2:2425955/1‑93 (MQ=255)

                                                                aCCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGaa                         >  2:1083718/1‑93 (MQ=255)

                                                                aCCGATCACTTTGTTTGTGTTCGTGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGaa                         <  1:3780389/93‑1 (MQ=255)

                                                                  cGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGt                       >  1:3361700/1‑93 (MQ=255)

                                                                  cGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGt                       >  1:6919802/1‑93 (MQ=255)

                                                                   gATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTa                      >  2:8761334/1‑93 (MQ=255)

                                                                   gATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTa                      >  2:6500838/1‑93 (MQ=255)

                                                                   gATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTa                      >  1:8536533/1‑93 (MQ=255)

                                                                    aTCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAt                     <  2:4223282/93‑1 (MQ=255)

                                                                      cACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTg                   >  1:2800441/1‑93 (MQ=255)

                                                                       aCTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGc                  <  2:179203/93‑1 (MQ=255)

                                                                       aCTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGc                  <  1:4691058/93‑1 (MQ=255)

                                                                        cTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCa                 <  1:6626997/93‑1 (MQ=255)

                                                                          ttgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAgg               <  1:6072229/93‑1 (MQ=255)

                                                                          ttgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAgg               <  2:372329/93‑1 (MQ=255)

                                                                          ttgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAga               >  1:6766284/1‑92 (MQ=255)

                                                                           tgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGa              <  1:3897223/93‑1 (MQ=255)

                                                                              ttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcgt           >  2:9046017/1‑93 (MQ=255)

                                                                                  gttCGGGAGTGAGGCGACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTa       <  2:4681481/93‑1 (MQ=255)

                                                                                  gttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTa       <  2:2482367/93‑1 (MQ=255)

                                                                                    tCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGc     >  1:7053139/1‑93 (MQ=255)

                                                                                     cGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGcc    >  1:2633097/1‑93 (MQ=255)

                                                                                      gggAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCt   >  1:7995609/1‑93 (MQ=255)

                                                                                       ggAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCtt  <  2:387500/93‑1 (MQ=255)

AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT  >  NC_000913/4081626‑4081805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 248 total aligned reads displayed.

GCCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTATC  >  NC_000913/4081623‑4081809

GCCAGAGGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAG                                                                                               <  SRR4302540.9274782/94‑1 (MQ=60)

GCCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAG                                                                                               >  SRR4302540.3675958/1‑94 (MQ=60)

GCCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAG                                                                                               >  SRR4302540.5331154/1‑94 (MQ=60)

 GCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGT                                                                                              <  SRR4302540.3064466/94‑1 (MQ=60)

  CAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTG                                                                                             >  SRR4302540.2644080/1‑94 (MQ=60)

  CAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTG                                                                                             >  SRR4302540.2413682/1‑94 (MQ=60)

  CAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTG                                                                                             >  SRR4302540.7639835/1‑94 (MQ=60)

   AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGA                                                                                            <  SRR4302540.534002/94‑1 (MQ=60)

   AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGA                                                                                            >  SRR4302540.1577438/1‑94 (MQ=60)

    GATGTTTGAGGGTTCAGTGTTCAGTGGGTCGATGGTGACGAGGATCTTCAGTTTCGACAGACAACCGATCACTTAGTTGTAGTTCGGGAGTGAG                                                                                           >  SRR4302540.9053174/1‑94 (MQ=60)

    GAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGCGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAG                                                                                           >  SRR4302540.9453155/1‑94 (MQ=60)

    GAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAG                                                                                           >  SRR4302540.3994702/1‑94 (MQ=60)

    GAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAG                                                                                           >  SRR4302540.4022017/1‑94 (MQ=60)

    GAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAG                                                                                           <  SRR4302540.356073/94‑1 (MQ=60)

    GAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAG                                                                                           >  SRR4302540.801771/1‑94 (MQ=60)

     AAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGG                                                                                          >  SRR4302540.8242010/1‑94 (MQ=60)

       GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA                                                                                        <  SRR4302540.5228579/94‑1 (MQ=60)

       GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA                                                                                        <  SRR4302540.8614290/94‑1 (MQ=60)

          AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA                                                                                     >  SRR4302540.1463101/1‑94 (MQ=60)

          AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA                                                                                     >  SRR4302540.9469899/1‑94 (MQ=60)

          AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA                                                                                     <  SRR4302540.8300144/94‑1 (MQ=60)

           GAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAG                                                                                    <  SRR4302540.1778515/94‑1 (MQ=60)

           GAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAG                                                                                    <  SRR4302540.3186946/94‑1 (MQ=60)

           GAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAG                                                                                    <  SRR4302540.3201915/94‑1 (MQ=60)

           GAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAG                                                                                    >  SRR4302540.3845265/1‑94 (MQ=60)

           GAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAG                                                                                    <  SRR4302540.6547616/94‑1 (MQ=60)

           GAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAG                                                                                    <  SRR4302540.3539554/94‑1 (MQ=60)

            AGGTTTCAGTGTTCAGTGGGTCGATGGTTACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGG                                                                                   <  SRR4302540.9569062/94‑1 (MQ=60)

            AGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGG                                                                                   <  SRR4302540.6798297/94‑1 (MQ=60)

             GGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGG                                                                                  >  SRR4302540.9239001/1‑94 (MQ=60)

             GGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGG                                                                                  >  SRR4302540.3681507/1‑94 (MQ=60)

              GTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGT                                                                                 <  SRR4302540.795462/94‑1 (MQ=60)

              GTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGT                                                                                 >  SRR4302540.8541121/1‑94 (MQ=60)

               gtgCAGTGTTCAGTGGGTCGCTGGTGACGAGCAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTT                                                                                <  SRR4302540.2077878/91‑1 (MQ=60)

               TTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTT                                                                                <  SRR4302540.2077603/94‑1 (MQ=60)

               TTTCAGTGTTCAGTGGGTCGAGGGGGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTT                                                                                <  SRR4302540.7936983/94‑1 (MQ=60)

                TTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTA                                                                               <  SRR4302540.859382/94‑1 (MQ=60)

                TTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTA                                                                               <  SRR4302540.5871321/94‑1 (MQ=60)

                TTCAGTGTTCAGTGGGCCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTA                                                                               >  SRR4302540.8236643/1‑94 (MQ=60)

                TGCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTA                                                                               <  SRR4302540.9372638/94‑1 (MQ=60)

                 TCAGTGTTCAGTGGGTCGATTGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAA                                                                              <  SRR4302540.8382353/94‑1 (MQ=60)

                  TAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAA                                                                             <  SRR4302540.2471295/94‑1 (MQ=60)

                  CAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAA                                                                             <  SRR4302540.5930042/94‑1 (MQ=60)

                  CAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAA                                                                             <  SRR4302540.5257991/94‑1 (MQ=60)

                  CAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAA                                                                             <  SRR4302540.3006656/94‑1 (MQ=60)

                   AGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAG                                                                            >  SRR4302540.4153495/1‑94 (MQ=60)

                   AGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAG                                                                            >  SRR4302540.5932188/1‑94 (MQ=60)

                   AGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAG                                                                            >  SRR4302540.7755783/1‑94 (MQ=60)

                   AGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAG                                                                            <  SRR4302540.3984990/94‑1 (MQ=60)

                   AGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAC                                                                            >  SRR4302540.1890862/1‑94 (MQ=60)

                    GTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGC                                                                           >  SRR4302540.7128774/1‑94 (MQ=60)

                      GTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCC                                                                         <  SRR4302540.2469917/94‑1 (MQ=60)

                      GTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCC                                                                         <  SRR4302540.8490759/94‑1 (MQ=60)

                      GTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCC                                                                         >  SRR4302540.4307372/1‑94 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGTACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        <  SRR4302540.541555/94‑1 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        <  SRR4302540.456868/94‑1 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        >  SRR4302540.3836723/1‑94 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        <  SRR4302540.1903676/94‑1 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        <  SRR4302540.640397/94‑1 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        >  SRR4302540.10106178/1‑94 (MQ=60)

                         CAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGG                                                                      <  SRR4302540.2243383/94‑1 (MQ=60)

                         CAGTGGGTCGAGGGTGACGAGGAACTTCAGGTTCGACAGACAACCGATCACTATGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGG                                                                      >  SRR4302540.9063980/1‑94 (MQ=60)

                          AGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGC                                                                     <  SRR4302540.623008/94‑1 (MQ=60)

                          AGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGC                                                                     >  SRR4302540.1089578/1‑94 (MQ=60)

                          AGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGC                                                                     <  SRR4302540.120771/94‑1 (MQ=60)

                           GTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCA                                                                    <  SRR4302540.152252/94‑1 (MQ=60)

                           GTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCA                                                                    <  SRR4302540.3912934/94‑1 (MQ=60)

                           GTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCA                                                                    <  SRR4302540.207442/94‑1 (MQ=60)

                            TGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAG                                                                   <  SRR4302540.4019224/94‑1 (MQ=60)

                             GGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGA                                                                  >  SRR4302540.7105658/1‑94 (MQ=60)

                              GGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAT                                                                 >  SRR4302540.9883184/1‑94 (MQ=60)

                              GGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAT                                                                 >  SRR4302540.9173214/1‑94 (MQ=60)

                              GGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAT                                                                 <  SRR4302540.2605802/94‑1 (MQ=60)

                              GGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAT                                                                 <  SRR4302540.3394390/94‑1 (MQ=60)

                              GGTCGATGGTGAC‑AGGAACTTCAGTTTCGACAGACAACCCATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGGTAAAGACCTGGCAGATA                                                                >  SRR4302540.9173215/1‑94 (MQ=60)

                               GTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATA                                                                <  SRR4302540.9887650/94‑1 (MQ=60)

                                TCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT                                                               <  SRR4302540.3565589/94‑1 (MQ=60)

                                TCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT                                                               <  SRR4302540.8746140/94‑1 (MQ=60)

                                TCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT                                                               <  SRR4302540.6519570/94‑1 (MQ=60)

                                TCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT                                                               <  SRR4302540.2061096/94‑1 (MQ=60)

                                 CGATGGTGACGAGGAGCTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATA                                                              >  SRR4302540.5600801/1‑94 (MQ=60)

                                 CGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATA                                                              <  SRR4302540.557418/94‑1 (MQ=60)

                                 CGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATA                                                              >  SRR4302540.7868482/1‑94 (MQ=60)

                                 CGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATA                                                              <  SRR4302540.7917312/94‑1 (MQ=60)

                                  GTTGGTGACGAGGAACTTCAGTTTCGACAGTCATCCGATCACTTTGTTCTTGTTCGGGCGTGAGGCAACTGGGTTAATTCTCTGGCAGATATAG                                                             >  SRR4302540.9032970/1‑94 (MQ=48)

                                  GATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAG                                                             >  SRR4302540.490252/1‑94 (MQ=60)

                                  GATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAG                                                             >  SRR4302540.2779699/1‑94 (MQ=60)

                                  GATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAG                                                             >  SRR4302540.9033146/1‑94 (MQ=60)

                                  GATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAG                                                             <  SRR4302540.7061302/94‑1 (MQ=60)

                                   ATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGC                                                            >  SRR4302540.9134417/1‑94 (MQ=60)

                                   ATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGC                                                            <  SRR4302540.3451872/94‑1 (MQ=60)

                                    TGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCC                                                           >  SRR4302540.7299220/1‑94 (MQ=60)

                                    TGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCC                                                           <  SRR4302540.6549713/94‑1 (MQ=60)

                                    TGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCC                                                           <  SRR4302540.3768238/94‑1 (MQ=60)

                                    TGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCC                                                           <  SRR4302540.3306235/94‑1 (MQ=60)

                                     GGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCA                                                          <  SRR4302540.3112053/94‑1 (MQ=60)

                                      GTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAT                                                         <  SRR4302540.2753579/94‑1 (MQ=60)

                                      GTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAT                                                         >  SRR4302540.6013415/1‑94 (MQ=60)

                                      GTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAT                                                         >  SRR4302540.6013414/1‑94 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        <  SRR4302540.8379245/94‑1 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        <  SRR4302540.1404391/94‑1 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        >  SRR4302540.3332612/1‑94 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        <  SRR4302540.6808479/94‑1 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        <  SRR4302540.5959485/94‑1 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        <  SRR4302540.2272463/94‑1 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        <  SRR4302540.10071627/94‑1 (MQ=60)

                                        GACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTG                                                       <  SRR4302540.7314054/94‑1 (MQ=60)

                                          CGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAC                                                     <  SRR4302540.2291864/94‑1 (MQ=60)

                                          CGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAC                                                     <  SRR4302540.2734985/94‑1 (MQ=60)

                                          CGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAC                                                     <  SRR4302540.3074724/94‑1 (MQ=60)

                                           GAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACC                                                    >  SRR4302540.8105919/1‑94 (MQ=60)

                                           GAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACC                                                    >  SRR4302540.606077/1‑94 (MQ=60)

                                            AGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCT                                                   <  SRR4302540.1036878/94‑1 (MQ=60)

                                            AGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGCCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCT                                                   >  SRR4302540.92379/1‑94 (MQ=60)

                                             GGGACTTCAGTTTCGACAGACAACCGATCCCTTTGTTTTTGTTCGGGAGTGAGGCACCAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT                                                  <  SRR4302540.5835509/94‑1 (MQ=60)

                                             GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT                                                  <  SRR4302540.519294/94‑1 (MQ=60)

                                             GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT                                                  <  SRR4302540.3810449/94‑1 (MQ=60)

                                             GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT                                                  <  SRR4302540.8190338/94‑1 (MQ=60)

                                             GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT                                                  <  SRR4302540.158477/94‑1 (MQ=60)

                                              GAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTG                                                 >  SRR4302540.9942209/1‑94 (MQ=60)

                                              GAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTG                                                 <  SRR4302540.2920744/94‑1 (MQ=60)

                                               AACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGC                                                >  SRR4302540.4987047/1‑94 (MQ=60)

                                               AACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGC                                                <  SRR4302540.4887102/94‑1 (MQ=60)

                                               AACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGC                                                <  SRR4302540.530215/94‑1 (MQ=60)

                                                ACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCC                                               >  SRR4302540.6211177/1‑94 (MQ=60)

                                                ACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCC                                               <  SRR4302540.2306672/94‑1 (MQ=60)

                                                 CTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCC                                              >  SRR4302540.1184195/1‑94 (MQ=60)

                                                  TTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCT                                             >  SRR4302540.5353967/1‑94 (MQ=60)

                                                  TTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCT                                             >  SRR4302540.2964261/1‑94 (MQ=60)

                                                    CAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCT                                           <  SRR4302540.638655/94‑1 (MQ=60)

                                                    CAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCT                                           <  SRR4302540.8033740/94‑1 (MQ=60)

                                                    CAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCT                                           >  SRR4302540.4004969/1‑94 (MQ=60)

                                                     AGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTT                                          >  SRR4302540.9423264/1‑94 (MQ=60)

                                                     AGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTT                                          <  SRR4302540.730919/94‑1 (MQ=60)

                                                      GTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTT                                         <  SRR4302540.2793372/94‑1 (MQ=60)

                                                       TTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTC                                        <  SRR4302540.3111393/94‑1 (MQ=60)

                                                         TCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCAT                                      <  SRR4302540.4593003/94‑1 (MQ=60)

                                                         TCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCAT                                      <  SRR4302540.1041457/94‑1 (MQ=60)

                                                          CGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATC                                     >  SRR4302540.9241632/1‑94 (MQ=60)

                                                           GACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCA                                    <  SRR4302540.6162151/94‑1 (MQ=60)

                                                           GACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATAA                                    >  SRR4302540.2823820/1‑94 (MQ=60)

                                                            ACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAT                                   <  SRR4302540.7329769/94‑1 (MQ=60)

                                                            ACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAT                                   >  SRR4302540.9706166/1‑94 (MQ=60)

                                                              AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT                                 <  SRR4302540.1760846/94‑1 (MQ=60)

                                                              AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT                                 <  SRR4302540.2851244/94‑1 (MQ=60)

                                                              AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT                                 >  SRR4302540.1306638/1‑94 (MQ=60)

                                                              AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT                                 >  SRR4302540.11818/1‑94 (MQ=60)

                                                                ACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCG                               <  SRR4302540.9690212/94‑1 (MQ=60)

                                                                 CAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGA                              <  SRR4302540.8005038/94‑1 (MQ=60)

                                                                 CAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGA                              >  SRR4302540.8571635/1‑94 (MQ=60)

                                                                   ACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAG                            <  SRR4302540.9763552/94‑1 (MQ=60)

                                                                   ACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAG                            <  SRR4302540.3998498/94‑1 (MQ=60)

                                                                   ACCGATCACTTTGTTTGTGTTCGTGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAG                            <  SRR4302540.3821626/94‑1 (MQ=60)

                                                                    CCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGT                           <  SRR4302540.8902863/94‑1 (MQ=60)

                                                                    CCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGT                           >  SRR4302540.3398498/1‑94 (MQ=60)

                                                                    CCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGT                           >  SRR4302540.6996800/1‑94 (MQ=60)

                                                                       ATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATT                        >  SRR4302540.6810792/1‑94 (MQ=60)

                                                                       ATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATT                        <  SRR4302540.8072081/94‑1 (MQ=60)

                                                                        TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTG                       <  SRR4302540.6537281/94‑1 (MQ=60)

                                                                        TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTG                       >  SRR4302540.2830685/1‑94 (MQ=60)

                                                                         CACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGGTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGC                      >  SRR4302540.4824173/1‑94 (MQ=60)

                                                                          ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA                     >  SRR4302540.777675/1‑94 (MQ=60)

                                                                          ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA                     <  SRR4302540.2270382/94‑1 (MQ=60)

                                                                          ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA                     <  SRR4302540.4741217/94‑1 (MQ=60)

                                                                           CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    <  SRR4302540.8123070/94‑1 (MQ=60)

                                                                           CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    >  SRR4302540.3164105/1‑94 (MQ=60)

                                                                           CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    >  SRR4302540.3012482/1‑94 (MQ=60)

                                                                           CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    <  SRR4302540.6700360/94‑1 (MQ=60)

                                                                            TTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGG                   <  SRR4302540.8183082/94‑1 (MQ=60)

                                                                            TTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGG                   >  SRR4302540.4422203/1‑94 (MQ=60)

                                                                            TTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGA                   >  SRR4302540.6841063/1‑94 (MQ=60)

                                                                             TTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGA                  <  SRR4302540.6139739/94‑1 (MQ=60)

                                                                              tggtgtgGTTCGGGAGTGAGGCAACAGTGTTAAAGGCCTGGCAGATATAGCCATTGCCCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC                 <  SRR4302540.6930291/87‑1 (MQ=60)

                                                                              TGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC                 <  SRR4302540.5933641/94‑1 (MQ=60)

                                                                              TGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC                 <  SRR4302540.6312624/94‑1 (MQ=60)

                                                                              TGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC                 <  SRR4302540.6930292/94‑1 (MQ=60)

                                                                                TTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGT               >  SRR4302540.3233082/1‑94 (MQ=60)

                                                                                 TTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTC              <  SRR4302540.3096992/94‑1 (MQ=60)

                                                                                  TTTGTTCGGGAGTGAGGCAACAGGGGTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCG             >  SRR4302540.2800598/1‑94 (MQ=60)

                                                                                   TTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGT            <  SRR4302540.165159/94‑1 (MQ=60)

                                                                                   TTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGT            >  SRR4302540.3487324/1‑94 (MQ=60)

                                                                                    TGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTA           >  SRR4302540.3352654/1‑94 (MQ=60)

                                                                                     GTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATCGCCCTTGACCTTGCCCTCTTTCTTCATCTCGAAGTATTGCCGGACGTCGTAG          >  SRR4302540.2386235/1‑94 (MQ=60)

                                                                                     GTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAG          <  SRR4302540.5498549/94‑1 (MQ=60)

                                                                                      TTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGC         >  SRR4302540.7131575/1‑94 (MQ=60)

                                                                                      TTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGC         <  SRR4302540.3798031/94‑1 (MQ=60)

                                                                                      TTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGC         <  SRR4302540.1788538/94‑1 (MQ=60)

                                                                                      TTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGC         >  SRR4302540.7668812/1‑94 (MQ=60)

                                                                                       TCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCC        >  SRR4302540.2661610/1‑94 (MQ=60)

                                                                                        CGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCT       >  SRR4302540.3520307/1‑94 (MQ=60)

                                                                                        CGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCT       >  SRR4302540.8088684/1‑94 (MQ=60)

                                                                                        CGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCT       <  SRR4302540.693564/94‑1 (MQ=60)

                                                                                           GAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTA    <  SRR4302540.560682/94‑1 (MQ=60)

                                                                                           GAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTA    >  SRR4302540.255250/1‑94 (MQ=60)

                                                                                           GAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTA    <  SRR4302540.7511113/94‑1 (MQ=60)

                                                                                           GAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTA    <  SRR4302540.5115330/94‑1 (MQ=60)

                                                                                            AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT   <  SRR4302540.1954486/94‑1 (MQ=60)

                                                                                            AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT   <  SRR4302540.3523294/94‑1 (MQ=60)

                                                                                            AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT   >  SRR4302540.9599959/1‑94 (MQ=60)

                                                                                             GTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTATC  >  SRR4302540.7657239/1‑94 (MQ=60)

GCCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTATC  >  NC_000913/4081623‑4081809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`