Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,103,641	T→C	intergenic (‑390/‑408)	cpxR ← / → yiiP	transcriptional regulator in 2‑component system/putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,103,641	0	T	C	99.8%	1872.0 / ‑5.7	579	intergenic (‑390/‑408)	cpxR/yiiP	transcriptional regulator in 2‑component system/putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (311/267); total (311/268)
Fisher's exact test for biased strand distribution p-value = 4.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01

Only 100 of 595 total aligned reads displayed.

TAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAATGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGG  >  NC_000913/4103551‑4103730

 aaCCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCa                                                                                         <  1:8790002/93‑1 (MQ=255)

  aCCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCAt                                                                                        <  2:4873288/93‑1 (MQ=255)

  aCCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCAt                                                                                        <  2:5094145/93‑1 (MQ=255)

  aCCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCAt                                                                                        >  2:6346897/1‑93 (MQ=255)

  aCCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCAt                                                                                        <  2:8208803/93‑1 (MQ=255)

   ccGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATc                                                                                       <  2:241057/93‑1 (MQ=255)

   acGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATc                                                                                       <  1:4640868/92‑1 (MQ=255)

    cGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCg                                                                                      >  2:2583869/1‑93 (MQ=255)

     gAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGc                                                                                     <  2:6008734/93‑1 (MQ=255)

     gAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGc                                                                                     >  1:1439048/1‑93 (MQ=255)

      aaCATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGcc                                                                                    <  1:3020001/93‑1 (MQ=255)

      aaCATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGcc                                                                                    <  2:2967303/93‑1 (MQ=255)

       aCATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCt                                                                                   >  1:9952691/1‑93 (MQ=255)

       aCATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCt                                                                                   >  2:7376392/1‑93 (MQ=255)

       aCATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCt                                                                                   >  1:2119693/1‑93 (MQ=255)

         aTCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCGTg                                                                                 >  1:4375795/1‑93 (MQ=255)

          tCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGt                                                                                >  1:6614731/1‑93 (MQ=255)

          tCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGt                                                                                >  2:5339524/1‑93 (MQ=255)

            aGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCa                                                                              >  1:706045/1‑93 (MQ=255)

            aGCGCCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGCACTGGAGACAACGCCTCGCCTTGTCa                                                                              >  2:9136092/1‑93 (MQ=255)

                tCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGc                                                                          >  1:5327100/1‑93 (MQ=255)

                tCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGc                                                                          <  2:4414823/93‑1 (MQ=255)

                   gcagATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑a                                                                      >  1:1020130/1‑93 (MQ=255)

                   gcagATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑a                                                                      >  1:3379892/1‑93 (MQ=255)

                     agATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑aaa                                                                    >  2:2209164/1‑93 (MQ=255)

                      gATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑aaaa                                                                   <  2:3150828/93‑1 (MQ=255)

                      gATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑aaaa                                                                   >  2:5758058/1‑93 (MQ=255)

                      gATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑aaaa                                                                   >  1:6327462/1‑93 (MQ=255)

                      gATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑aaaa                                                                   >  2:8859989/1‑93 (MQ=255)

                       aTGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAAt                                                                  >  2:8317207/1‑93 (MQ=255)

                       aTGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAAt                                                                  >  2:1152632/1‑93 (MQ=255)

                          cGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAAtttt                                                               >  2:7055587/1‑93 (MQ=255)

                          cGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAAtttt                                                               >  1:7875210/1‑93 (MQ=255)

                           gagaTCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCTCAG‑AAAATTTtg                                                              <  2:4324883/93‑1 (MQ=255)

                           gagaTCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTtg                                                              >  2:3370139/1‑93 (MQ=255)

                            agaTCTTAGGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTtga                                                             <  2:8509673/93‑1 (MQ=255)

                             gaTCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTtgat                                                            <  2:8065008/93‑1 (MQ=255)

                              aTCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTtgatg                                                           <  1:6421448/93‑1 (MQ=255)

                               tCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTtgatga                                                          >  1:4215773/1‑93 (MQ=255)

                               tCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTtgatga                                                          >  2:3608773/1‑93 (MQ=255)

                                cTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGaa                                                         >  2:6514366/1‑93 (MQ=255)

                                  tATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGaaaa                                                       <  1:383527/93‑1 (MQ=255)

                                  tATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGaaaa                                                       <  2:3945950/93‑1 (MQ=255)

                                    tGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAAcc                                                     >  1:6062987/1‑92 (MQ=255)

                                      cAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCt                                                   <  2:5490875/93‑1 (MQ=255)

                                       aaCAGGCCCGGCACGAACAGCCTACTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCtg                                                  <  2:6936786/93‑1 (MQ=255)

                                        aCAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCtgt                                                 <  1:7676757/93‑1 (MQ=255)

                                        aCAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCtgt                                                 <  1:2440989/93‑1 (MQ=255)

                                         cAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCtgtg                                                <  2:9868658/93‑1 (MQ=255)

                                          aGGCCCGGCACGAACAGCCTCCTGATAATGTTAGCGAACTGAAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTgc                                               <  1:8990306/93‑1 (MQ=255)

                                           ggCCCGGCACGAACAGGCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTgcg                                              >  2:9560185/1‑93 (MQ=255)

                                              ccGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTgcgcgc                                           >  1:8569074/1‑93 (MQ=255)

                                               cGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGca                                          >  2:1852484/1‑93 (MQ=255)

                                               cGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGca                                          >  2:9247310/1‑93 (MQ=255)

                                                 gCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGcaca                                        <  2:9804828/93‑1 (MQ=255)

                                                    cGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGc                                     <  2:7585112/93‑1 (MQ=255)

                                                    cGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGc                                     <  1:1149568/93‑1 (MQ=255)

                                                     gAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCa                                    <  1:1506308/93‑1 (MQ=255)

                                                     gAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCa                                    >  1:507275/1‑93 (MQ=255)

                                                         aGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaaa                                >  1:1871193/1‑93 (MQ=255)

                                                         aGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGGCCCCGGAGAAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaa                                 <  1:959462/93‑1 (MQ=255)

                                                            ctcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaaaaaa                             <  2:9371780/93‑1 (MQ=255)

                                                            ctcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaaaaaa                             <  1:25996/93‑1 (MQ=255)

                                                            ctcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGaaaaaa                             >  2:626437/1‑93 (MQ=255)

                                                             tcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAt                            <  1:1208322/93‑1 (MQ=255)

                                                             tcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAt                            >  2:7821336/1‑93 (MQ=255)

                                                             tcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAt                            <  1:45243/93‑1 (MQ=255)

                                                             tcctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAt                            <  2:1424990/93‑1 (MQ=255)

                                                               ctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATgg                          <  1:2871494/93‑1 (MQ=255)

                                                               ctGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATgg                          >  1:5771361/1‑93 (MQ=255)

                                                                 gTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCg                        >  1:9161140/1‑93 (MQ=255)

                                                                  ttAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGa                       >  1:3910493/1‑93 (MQ=255)

                                                                  ttAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGa                       >  1:9302468/1‑93 (MQ=255)

                                                                   tAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGaa                      <  1:7236204/93‑1 (MQ=255)

                                                                   tAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGaa                      <  1:4100616/93‑1 (MQ=255)

                                                                   tAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGaa                      <  2:6784083/93‑1 (MQ=255)

                                                                    aaTGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAt                     <  1:8077922/93‑1 (MQ=255)

                                                                    aaTGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAt                     <  2:7214794/93‑1 (MQ=255)

                                                                     aTGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATg                    >  2:4541658/1‑93 (MQ=255)

                                                                      tGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGa                   >  2:4245257/1‑93 (MQ=255)

                                                                      tGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGa                   <  2:4771056/93‑1 (MQ=255)

                                                                        ttAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGc                 >  1:9740692/1‑93 (MQ=255)

                                                                         tAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCa                >  1:326698/1‑93 (MQ=255)

                                                                         tAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCa                <  2:1922202/93‑1 (MQ=255)

                                                                           gCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCaaa              <  1:356762/93‑1 (MQ=255)

                                                                           gCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCaaa              <  2:1243407/93‑1 (MQ=255)

                                                                           gCGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCaaa              <  2:2796022/93‑1 (MQ=255)

                                                                            cGAACTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAAt             >  1:2498804/1‑93 (MQ=255)

                                                                              aaCTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTg           >  2:615190/1‑93 (MQ=255)

                                                                                cTGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCt         >  2:5603124/1‑93 (MQ=255)

                                                                                cTGGAGACAACGCATCGCCTCGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCt         >  1:5881048/1‑93 (MQ=255)

                                                                                 tGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTc        >  1:8329298/1‑93 (MQ=255)

                                                                                 tGGAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTc        >  1:5538611/1‑93 (MQ=255)

                                                                                  ggAGACAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCg       >  2:1613096/1‑93 (MQ=255)

                                                                                    agaCAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTc     <  1:6777337/93‑1 (MQ=255)

                                                                                    agaCAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTc     <  1:1681427/93‑1 (MQ=255)

                                                                                     gaCAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCa    >  1:5947428/1‑93 (MQ=255)

                                                                                     gaCAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCa    <  1:7360315/93‑1 (MQ=255)

                                                                                     gaCAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCa    >  2:872784/1‑93 (MQ=255)

                                                                                       cAACGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAgg  >  2:4119399/1‑93 (MQ=255)

TAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAATGCATCGCCTTGTCACCGCAG‑AAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGG  >  NC_000913/4103551‑4103730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 313 total aligned reads displayed.

GTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAATGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTTGA  >  NC_000913/4103548‑4103734

GTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAAC                                                                                               >  SRR4302540.9957834/1‑94 (MQ=60)

GTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAAC                                                                                               >  SRR4302540.992663/1‑94 (MQ=60)

GTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAAC                                                                                               <  SRR4302540.9703336/94‑1 (MQ=60)

 GTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACG                                                                                              <  SRR4302540.3739019/94‑1 (MQ=60)

 GTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACG                                                                                              <  SRR4302540.1436711/94‑1 (MQ=60)

  TTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGC                                                                                             >  SRR4302540.739723/1‑94 (MQ=60)

    AACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCAT                                                                                           <  SRR4302540.9572687/94‑1 (MQ=60)

    AACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCAT                                                                                           >  SRR4302540.1847848/1‑94 (MQ=60)

    AACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCAT                                                                                           <  SRR4302540.6121260/94‑1 (MQ=60)

      ACGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCG                                                                                         <  SRR4302540.4690559/94‑1 (MQ=60)

       CGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGC                                                                                        >  SRR4302540.1454663/1‑94 (MQ=60)

       CGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGC                                                                                        <  SRR4302540.3412800/94‑1 (MQ=60)

       CGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGC                                                                                        >  SRR4302540.5345935/1‑94 (MQ=60)

        GAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCC                                                                                       <  SRR4302540.3503393/94‑1 (MQ=60)

        GAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCC                                                                                       <  SRR4302540.4546149/94‑1 (MQ=60)

         AACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCT                                                                                      >  SRR4302540.2142443/1‑94 (MQ=60)

         AACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCT                                                                                      <  SRR4302540.1539992/94‑1 (MQ=60)

         AACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCT                                                                                      >  SRR4302540.7814795/1‑94 (MQ=60)

          ACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTT                                                                                     <  SRR4302540.1195204/94‑1 (MQ=60)

          ACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTT                                                                                     <  SRR4302540.1802922/94‑1 (MQ=60)

          ACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTT                                                                                     <  SRR4302540.2965762/94‑1 (MQ=60)

          ACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTT                                                                                     <  SRR4302540.6809382/94‑1 (MQ=60)

           CATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTG                                                                                    >  SRR4302540.4651269/1‑94 (MQ=60)

            ATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGT                                                                                   <  SRR4302540.6074962/94‑1 (MQ=60)

            ATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGT                                                                                   <  SRR4302540.9297247/94‑1 (MQ=60)

             TCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTC                                                                                  <  SRR4302540.4351185/94‑1 (MQ=60)

              CAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCA                                                                                 >  SRR4302540.1180820/1‑94 (MQ=60)

              CAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCA                                                                                 <  SRR4302540.7910448/94‑1 (MQ=60)

              CAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCA                                                                                 >  SRR4302540.713627/1‑94 (MQ=60)

               AGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCAC                                                                                >  SRR4302540.914619/1‑94 (MQ=60)

                GCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACC                                                                               <  SRR4302540.10028917/94‑1 (MQ=60)

                GCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGATAGCGAACTGGAGACAACGCATCGCCTTGTCACC                                                                               >  SRR4302540.5734649/1‑94 (MQ=60)

                 CGTCAGCAGATGCGAGATCTTAAGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCG                                                                              >  SRR4302540.4181234/1‑94 (MQ=60)

                  GTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGC                                                                             <  SRR4302540.1985158/94‑1 (MQ=60)

                  GTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGC                                                                             >  SRR4302540.2380887/1‑94 (MQ=60)

                  GTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGC                                                                             >  SRR4302540.6523435/1‑94 (MQ=60)

                     AGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGA                                                                          >  SRR4302540.1398770/1‑94 (MQ=60)

                     AGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGA                                                                          >  SRR4302540.7979875/1‑94 (MQ=60)

                     AGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGA                                                                          >  SRR4302540.1030483/1‑94 (MQ=60)

                        AGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAA                                                                       >  SRR4302540.6397925/1‑94 (MQ=60)

                        AGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAA                                                                       >  SRR4302540.7929242/1‑94 (MQ=60)

                        AGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAA                                                                       >  SRR4302540.343777/1‑94 (MQ=60)

                        AGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAA                                                                       <  SRR4302540.3599150/94‑1 (MQ=60)

                        AGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAA                                                                       <  SRR4302540.251869/94‑1 (MQ=60)

                        AGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAA                                                                       >  SRR4302540.4438289/1‑94 (MQ=60)

                         GATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAAT                                                                      >  SRR4302540.9028478/1‑94 (MQ=60)

                         GATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAAT                                                                      >  SRR4302540.5194201/1‑94 (MQ=60)

                         GATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAAT                                                                      >  SRR4302540.81915/1‑94 (MQ=60)

                          ATGCGAGATCTTATGCAACAGGCCCGGCATGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATT                                                                     >  SRR4302540.6460796/1‑94 (MQ=60)

                            GCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTT                                                                   >  SRR4302540.7004084/1‑94 (MQ=60)

                            GCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTT                                                                   >  SRR4302540.7967469/1‑94 (MQ=60)

                             CGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCCGAAAATTTTG                                                                  >  SRR4302540.2126438/1‑94 (MQ=60)

                             CGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTG                                                                  >  SRR4302540.9020572/1‑94 (MQ=60)

                               AGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGAT                                                                <  SRR4302540.4330439/94‑1 (MQ=60)

                               AGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGAT                                                                >  SRR4302540.4259642/1‑94 (MQ=60)

                               AAATCTTATGGAACAGGCCCGGCCCGAACCGCGTCCTGTTAATGTTAGCGAACTGGACACAACGCATCGCCTTGTCACCGCAGAAAATTTTGAT                                                                <  SRR4302540.1775708/94‑1 (MQ=60)

                                GATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATG                                                               >  SRR4302540.268109/1‑94 (MQ=60)

                                 ATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGA                                                              >  SRR4302540.4261672/1‑94 (MQ=60)

                                 ATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGA                                                              <  SRR4302540.3192268/94‑1 (MQ=60)

                                 ATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGA                                                              >  SRR4302540.8959461/1‑94 (MQ=60)

                                 ATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGA                                                              >  SRR4302540.6897669/1‑94 (MQ=60)

                                 ATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGA                                                              >  SRR4302540.3882965/1‑94 (MQ=60)

                                  TCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAA                                                             <  SRR4302540.4679408/94‑1 (MQ=60)

                                   CTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAA                                                            <  SRR4302540.2932804/94‑1 (MQ=60)

                                   CTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAA                                                            >  SRR4302540.6278144/1‑94 (MQ=60)

                                   CTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAA                                                            <  SRR4302540.1212715/94‑1 (MQ=60)

                                    TTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGCCAACGCATCGCCTTGTCACCGCAGACAATTTTGATGAAAC                                                           >  SRR4302540.6813731/1‑94 (MQ=60)

                                    TTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAA                                                           >  SRR4302540.356874/1‑94 (MQ=60)

                                    TTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAA                                                           <  SRR4302540.9685573/94‑1 (MQ=60)

                                     TATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAAC                                                          <  SRR4302540.5835838/94‑1 (MQ=60)

                                     TATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAAC                                                          <  SRR4302540.3846838/94‑1 (MQ=60)

                                     TATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAAC                                                          <  SRR4302540.3885569/94‑1 (MQ=60)

                                     TATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAAC                                                          >  SRR4302540.3998060/1‑94 (MQ=60)

                                     TATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAAC                                                          <  SRR4302540.8037424/94‑1 (MQ=60)

                                      ATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACG                                                         <  SRR4302540.7410779/94‑1 (MQ=60)

                                      ATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACG                                                         >  SRR4302540.8515103/1‑94 (MQ=60)

                                      ATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACG                                                         >  SRR4302540.6834048/1‑94 (MQ=60)

                                       TGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGC                                                        <  SRR4302540.9719307/94‑1 (MQ=60)

                                        GCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCT                                                       <  SRR4302540.7607985/94‑1 (MQ=60)

                                        GCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCT                                                       <  SRR4302540.882617/94‑1 (MQ=60)

                                         CAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTG                                                      <  SRR4302540.4838306/94‑1 (MQ=60)

                                         CAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTG                                                      <  SRR4302540.4155025/94‑1 (MQ=60)

                                         CAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTG                                                      >  SRR4302540.39648/1‑94 (MQ=60)

                                          AACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGCAAACGCTGG                                                     >  SRR4302540.9374675/1‑94 (MQ=60)

                                          AACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGT                                                     >  SRR4302540.559347/1‑94 (MQ=60)

                                          AACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGT                                                     <  SRR4302540.372730/94‑1 (MQ=60)

                                          AACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGT                                                     >  SRR4302540.1613089/1‑94 (MQ=60)

                                           ACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTG                                                    <  SRR4302540.7763531/94‑1 (MQ=60)

                                           ACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTG                                                    <  SRR4302540.2467277/94‑1 (MQ=60)

                                           ACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTG                                                    <  SRR4302540.532211/94‑1 (MQ=60)

                                            CAGGCCCGGCGCGAACAGCCTTCTGTTAAGGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGC                                                   <  SRR4302540.8287527/94‑1 (MQ=60)

                                            CAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGC                                                   <  SRR4302540.6581482/94‑1 (MQ=60)

                                            CAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGC                                                   >  SRR4302540.1045043/1‑94 (MQ=60)

                                            CAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGC                                                   >  SRR4302540.1045039/1‑94 (MQ=60)

                                            CAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCATGTCACCGCAGAAAATTTTGATGAAAACGCTGTGC                                                   >  SRR4302540.6409142/1‑94 (MQ=60)

                                             AGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCG                                                  <  SRR4302540.129632/94‑1 (MQ=60)

                                             AGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCG                                                  >  SRR4302540.7274769/1‑94 (MQ=60)

                                             AGGCCCGGCACGAACAGCCTCCTGATAATGTTAGCGAACTGAAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCG                                                  <  SRR4302540.9097952/94‑1 (MQ=60)

                                                CCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGC                                               >  SRR4302540.8668605/1‑94 (MQ=60)

                                                  CGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCAC                                             >  SRR4302540.10009540/1‑94 (MQ=60)

                                                  CGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCAC                                             >  SRR4302540.8700551/1‑94 (MQ=60)

                                                  CGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCAC                                             >  SRR4302540.9932480/1‑94 (MQ=60)

                                                  CGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCAC                                             <  SRR4302540.4385104/94‑1 (MQ=60)

                                                  CGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCAC                                             >  SRR4302540.3307065/1‑94 (MQ=60)

                                                    GCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAG                                           >  SRR4302540.5954591/1‑94 (MQ=60)

                                                     CACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGG                                          >  SRR4302540.2612310/1‑94 (MQ=60)

                                                      ACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGC                                         >  SRR4302540.5411919/1‑94 (MQ=60)

                                                      ACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGC                                         >  SRR4302540.372852/1‑94 (MQ=60)

                                                      ACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGC                                         <  SRR4302540.9155214/94‑1 (MQ=60)

                                                       CGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCA                                        >  SRR4302540.512712/1‑94 (MQ=60)

                                                       CGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCA                                        >  SRR4302540.4000662/1‑94 (MQ=60)

                                                       CGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCA                                        <  SRR4302540.1161553/94‑1 (MQ=60)

                                                        caacagccgccgcttaacgtgagctaagTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTTATGAAAACGCTGTGCGCGCACAGGCAG                                       <  SRR4302540.1522929/66‑1 (MQ=60)

                                                         AACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACACTGTGCGCGCACAGGCAGA                                      >  SRR4302540.1058896/1‑94 (MQ=60)

                                                          ACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAA                                     <  SRR4302540.2707795/94‑1 (MQ=60)

                                                           CAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAA                                    >  SRR4302540.707267/1‑94 (MQ=60)

                                                           CAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAA                                    >  SRR4302540.7408038/1‑94 (MQ=60)

                                                           CAGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAA                                    >  SRR4302540.1891698/1‑94 (MQ=60)

                                                            AGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAA                                   <  SRR4302540.5988738/94‑1 (MQ=60)

                                                            AGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAA                                   >  SRR4302540.5610974/1‑94 (MQ=60)

                                                            AGCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAA                                   >  SRR4302540.9383424/1‑94 (MQ=60)

                                                             GCCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCCCAGGCAGAAAAA                                  >  SRR4302540.2486972/1‑94 (MQ=60)

                                                              CCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAA                                 >  SRR4302540.8771424/1‑94 (MQ=60)

                                                              CCTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAA                                 >  SRR4302540.7441769/1‑94 (MQ=60)

                                                               CTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAT                                <  SRR4302540.26277/94‑1 (MQ=60)

                                                               CTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAT                                >  SRR4302540.1509784/1‑94 (MQ=60)

                                                               CTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAT                                >  SRR4302540.1499540/1‑94 (MQ=60)

                                                               CTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAT                                <  SRR4302540.2936433/94‑1 (MQ=60)

                                                               CTCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAT                                >  SRR4302540.9434636/1‑94 (MQ=60)

                                                               CTCCTGTTAATGGTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAAT                                <  SRR4302540.9764001/94‑1 (MQ=60)

                                                                TCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATG                               >  SRR4302540.5414907/1‑94 (MQ=60)

                                                                TCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATG                               <  SRR4302540.45709/94‑1 (MQ=60)

                                                                TCCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATG                               <  SRR4302540.1220722/94‑1 (MQ=60)

                                                                 CCTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGG                              >  SRR4302540.5835103/1‑94 (MQ=60)

                                                                  CTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGC                             >  SRR4302540.9645972/1‑94 (MQ=60)

                                                                  CTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGC                             >  SRR4302540.1944943/1‑94 (MQ=60)

                                                                  CTGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGC                             >  SRR4302540.1629065/1‑94 (MQ=60)

                                                                   TGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCG                            >  SRR4302540.9271090/1‑94 (MQ=60)

                                                                   TGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCG                            >  SRR4302540.2697236/1‑94 (MQ=60)

                                                                   TGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCG                            >  SRR4302540.7980528/1‑94 (MQ=60)

                                                                   TGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCG                            >  SRR4302540.2233724/1‑94 (MQ=60)

                                                                   TGTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCG                            >  SRR4302540.828936/1‑94 (MQ=60)

                                                                    GTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGA                           >  SRR4302540.7694695/1‑94 (MQ=60)

                                                                    GTTAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGA                           >  SRR4302540.3926380/1‑94 (MQ=60)

                                                                      TAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAT                         <  SRR4302540.7316920/94‑1 (MQ=60)

                                                                      TAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAT                         <  SRR4302540.4624441/94‑1 (MQ=60)

                                                                      TAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAT                         <  SRR4302540.1690322/94‑1 (MQ=60)

                                                                      TAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAT                         <  SRR4302540.882734/94‑1 (MQ=60)

                                                                      TAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAT                         >  SRR4302540.4133707/1‑94 (MQ=60)

                                                                      TAATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAAT                         <  SRR4302540.4144855/94‑1 (MQ=60)

                                                                       AATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATG                        >  SRR4302540.313271/1‑94 (MQ=60)

                                                                       AATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATG                        <  SRR4302540.8171669/94‑1 (MQ=60)

                                                                       AATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATG                        >  SRR4302540.255075/1‑94 (MQ=60)

                                                                       AATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATG                        <  SRR4302540.5852705/94‑1 (MQ=60)

                                                                        ATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGA                       >  SRR4302540.3382398/1‑94 (MQ=60)

                                                                        ATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGA                       <  SRR4302540.6097639/94‑1 (MQ=60)

                                                                        ATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGA                       <  SRR4302540.6040119/94‑1 (MQ=60)

                                                                        ATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGA                       <  SRR4302540.9102788/94‑1 (MQ=60)

                                                                        ATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGA                       >  SRR4302540.621034/1‑94 (MQ=60)

                                                                        ATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGA                       >  SRR4302540.3382403/1‑94 (MQ=60)

                                                                        ATGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGA                       >  SRR4302540.7580757/1‑94 (MQ=60)

                                                                         TGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAG                      >  SRR4302540.3764664/1‑94 (MQ=60)

                                                                         TGTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAG                      >  SRR4302540.661027/1‑94 (MQ=60)

                                                                          GTTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGC                     >  SRR4302540.9855036/1‑94 (MQ=60)

                                                                           TTAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCA                    >  SRR4302540.329973/1‑94 (MQ=60)

                                                                            TAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAA                   >  SRR4302540.5899536/1‑94 (MQ=60)

                                                                            TAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAA                   >  SRR4302540.3068295/1‑94 (MQ=60)

                                                                            TAGCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAA                   <  SRR4302540.3044805/94‑1 (MQ=60)

                                                                              GCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAAT                 >  SRR4302540.2525750/1‑94 (MQ=60)

                                                                              GCGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAAT                 <  SRR4302540.3949432/94‑1 (MQ=60)

                                                                               CGAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATT                >  SRR4302540.9754819/1‑94 (MQ=60)

                                                                                GAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTG               >  SRR4302540.2399908/1‑94 (MQ=60)

                                                                                GAACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTG               >  SRR4302540.6003671/1‑94 (MQ=60)

                                                                                 AACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGC              <  SRR4302540.1849610/94‑1 (MQ=60)

                                                                                  ACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCT             >  SRR4302540.6636160/1‑94 (MQ=60)

                                                                                  ACTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCT             >  SRR4302540.1517097/1‑94 (MQ=60)

                                                                                  ACTGGAGACAACGCATCGCCTCGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCT             >  SRR4302540.5946046/1‑94 (MQ=60)

                                                                                   CTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTC            >  SRR4302540.8425972/1‑94 (MQ=60)

                                                                                   CTGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTC            >  SRR4302540.4982413/1‑94 (MQ=60)

                                                                                    TGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACATGCAGAAAAAATGGCGAATGAGCAAATTGCTCG           >  SRR4302540.6476818/1‑94 (MQ=60)

                                                                                    TGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGACACAATGGCGAATGAGCACATTGCTCG           >  SRR4302540.5469605/1‑94 (MQ=60)

                                                                                    TGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCG           <  SRR4302540.715036/94‑1 (MQ=60)

                                                                                    TGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCG           >  SRR4302540.5653393/1‑94 (MQ=60)

                                                                                    TGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCG           >  SRR4302540.5277811/1‑94 (MQ=60)

                                                                                    GGGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCG           <  SRR4302540.8624042/94‑1 (MQ=60)

                                                                                     GGAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGT          >  SRR4302540.4450984/1‑94 (MQ=60)

                                                                                      GAGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTC         <  SRR4302540.7257659/94‑1 (MQ=60)

                                                                                       AGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCA        >  SRR4302540.6377940/1‑94 (MQ=60)

                                                                                       AGACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCA        <  SRR4302540.2544754/94‑1 (MQ=60)

                                                                                        GACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAG       >  SRR4302540.2204131/1‑94 (MQ=60)

                                                                                        GACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAG       >  SRR4302540.1008172/1‑94 (MQ=60)

                                                                                        GACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAG       <  SRR4302540.507228/94‑1 (MQ=60)

                                                                                        GACAACGCATCGCCTTGTCACCGCAGAAAATTTTCATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAG       <  SRR4302540.6284349/94‑1 (MQ=60)

                                                                                         ACAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGG      >  SRR4302540.6816549/1‑94 (MQ=60)

                                                                                          CAACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGT     <  SRR4302540.2489666/94‑1 (MQ=60)

                                                                                           AACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTT    >  SRR4302540.1764704/1‑94 (MQ=60)

                                                                                           AACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTT    <  SRR4302540.9272826/94‑1 (MQ=60)

                                                                                           AACGCAGCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGGGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTG    >  SRR4302540.7811506/1‑94 (MQ=60)

                                                                                            ACGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTTG   <  SRR4302540.5949381/94‑1 (MQ=60)

                                                                                             CGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTTGA  <  SRR4302540.7733237/94‑1 (MQ=60)

GTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAATGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTTGA  >  NC_000913/4103548‑4103734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`