Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,103,967 (T)8→7 intergenic (‑716/‑82) cpxR ← / → yiiP transcriptional regulator in 2‑component system/putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,103,9600T.94.5% 1745.7 / 92.4 454intergenic (‑709/‑89)cpxR/yiiPtranscriptional regulator in 2‑component system/putative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base T (3/21);  new base . (169/245);  total (184/270)
Fisher's exact test for biased strand distribution p-value = 4.83e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.16e-01

Only 100 of 535 total aligned reads displayed.

CTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTA  >  NC_000913/4103868‑4104049
                                                                                             |                                                                                         
 tATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCAT‑CCCCCACATGCTGTGGGGGtt                                                                                          <  2:458206/93‑1 (MQ=255)
   tttagtagtAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTCCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttt                                                                                        <  1:2898347/90‑1 (MQ=255)
   ttGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttt                                                                                        >  1:6446490/1‑93 (MQ=255)
   ttGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttt                                                                                        >  1:3335717/1‑93 (MQ=255)
     gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttt                                                                                      <  2:1439048/93‑1 (MQ=255)
     gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttt                                                                                      <  2:2209856/93‑1 (MQ=255)
     gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttt                                                                                      >  2:3318235/1‑93 (MQ=255)
      agtagtAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGttttttt                                                                                     >  1:5305932/1‑93 (MQ=255)
       gtagtaGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGttttttta                                                                                    <  1:4262315/93‑2 (MQ=255)
        tagtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttttat                                                                                   <  2:3884183/93‑3 (MQ=255)
        tagtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTa                                                                                   <  2:5835017/93‑1 (MQ=255)
          gtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttttatcc                                                                                 >  2:8321693/1‑89 (MQ=255)
          gtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttttatcc                                                                                 >  2:5912743/1‑89 (MQ=255)
          gtagCAACTCACGTGCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttttatcc                                                                                 <  1:5514714/93‑5 (MQ=255)
           tagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCt                                                                               >  1:1189124/1‑93 (MQ=255)
           tagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCt                                                                               >  2:3402840/1‑93 (MQ=255)
           tagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCt                                                                               >  1:2067307/1‑93 (MQ=255)
            agCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTc                                                                              <  1:7397559/93‑1 (MQ=255)
             gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCa                                                                             <  1:2364054/93‑1 (MQ=255)
             gCAACTCACGTTCCCAGTAGCAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCa                                                                             >  1:8769680/1‑93 (MQ=255)
              cAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCaa                                                                            >  1:6095472/1‑93 (MQ=255)
               aaCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAt                                                                           <  1:9167826/93‑1 (MQ=255)
               aaCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAt                                                                           >  1:9500936/1‑93 (MQ=255)
                aCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAtt                                                                          >  1:356587/1‑93 (MQ=255)
                aCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAtt                                                                          <  1:6901471/93‑1 (MQ=255)
                aCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAtt                                                                          >  2:4648201/1‑93 (MQ=255)
                 cttaCGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATTCTCAAttt                                                                         >  2:36348/4‑93 (MQ=255)
                 cTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAttt                                                                         <  2:8878003/93‑1 (MQ=255)
                   cACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGc                                                                       <  2:6417909/93‑1 (MQ=255)
                   cACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGc                                                                       <  1:3082284/93‑1 (MQ=255)
                    aCGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGcc                                                                      >  1:1339833/1‑93 (MQ=255)
                     cGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑GTTTTTTATCCTCAATTTGCct                                                                     >  2:2393462/1‑93 (MQ=255)
                      gTTCCCAGTAGTAAACCCTGTTTGCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCct                                                                     <  2:2951320/93‑1 (MQ=255)
                       ttCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCctgc                                                                   <  2:1827855/93‑1 (MQ=255)
                        tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCctgct                                                                  <  2:613729/93‑1 (MQ=255)
                         cccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCctgctg                                                                 >  2:8518027/1‑93 (MQ=255)
                         cccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCctgctg                                                                 >  1:7798457/1‑93 (MQ=255)
                              tagtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTaa                                                            <  1:9929565/93‑1 (MQ=255)
                              tagtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTaa                                                            <  1:3924139/93‑1 (MQ=255)
                                gtaAACCCTGTTTTCCTTGCCATAGACCCCATCCCTGTCTT‑CCCCCCCATGCTGTGGGGG‑GTTTTTTATTCTCACTTTGCCTGCTGCTTACTg                                                          >  1:7529402/1‑93 (MQ=255)
                                 taAACCCTGTTTTCCTTGCCATAGACGCCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATg                                                          <  2:9546324/93‑1 (MQ=255)
                                 taAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGc                                                         >  1:4321480/1‑93 (MQ=255)
                                 taAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGc                                                         >  2:674258/1‑93 (MQ=255)
                                  aaaCCCTGTTTGCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCa                                                        <  2:7587855/93‑1 (MQ=255)
                                   aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt                                                       <  1:4051958/93‑1 (MQ=255)
                                   aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt                                                       <  1:3816495/93‑1 (MQ=255)
                                   aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt                                                       >  1:712643/1‑93 (MQ=255)
                                   aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt                                                       <  2:6974230/93‑1 (MQ=255)
                                    aCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt                                                      >  2:7428498/1‑93 (MQ=255)
                                      ccTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGc                                                    >  1:4818449/1‑93 (MQ=255)
                                       cTGTGTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGc                                                    <  1:1884748/93‑1 (MQ=255)
                                        tGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAg                                                  <  2:440663/93‑1 (MQ=255)
                                         gTTTTCCTTGCCATAGACCCCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAga                                                 <  2:7683768/93‑1 (MQ=255)
                                            ttCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatga                                              <  1:9310379/93‑1 (MQ=255)
                                            ttCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatga                                              <  2:5672190/93‑1 (MQ=255)
                                             tCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat                                             <  2:5521/93‑1 (MQ=255)
                                              ccTTGCCATAGACACCATCCCTGTCTT‑CCCCCCCATGCTGTGGGGG‑GTTTTTTATCCTCAATTTGCCTTCTGCTTAATGCATCGCAGATGAtt                                            >  2:2583766/1‑93 (MQ=255)
                                              ccTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt                                            <  1:2565828/93‑1 (MQ=255)
                                              ccTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt                                            <  1:5134357/93‑1 (MQ=255)
                                              ccTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt                                            <  2:2830254/93‑1 (MQ=255)
                                               cTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAttt                                           <  2:6563415/93‑1 (MQ=255)
                                               cTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAttt                                           <  1:584814/93‑1 (MQ=255)
                                                  tccATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCt                                        <  1:6528433/92‑1 (MQ=255)
                                                    cATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTc                                      >  1:7694361/1‑93 (MQ=255)
                                                      tAGACACCATCCCTGTCTTCCCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTcc                                     >  2:3767840/1‑93 (MQ=255)
                                                         acacCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATTATTTGCTTCCGTta                                 <  2:8067395/93‑1 (MQ=255)
                                                         acacCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta                                 <  2:9366284/93‑1 (MQ=255)
                                                         acacCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta                                 <  1:8044289/93‑1 (MQ=255)
                                                          ctccATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTtat                                <  2:1233295/91‑1 (MQ=255)
                                                             cATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACt                             <  1:5021939/93‑1 (MQ=255)
                                                              aTCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTa                            <  1:458000/93‑1 (MQ=255)
                                                               tCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAg                           >  1:8388976/1‑93 (MQ=255)
                                                               tCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAg                           >  1:9768721/1‑93 (MQ=255)
                                                                 ccTGTCTT‑CCCCCACATGCTGTGGGGG‑GTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCg                         >  2:7103624/1‑93 (MQ=255)
                                                                   tGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTc                       <  1:8606224/93‑1 (MQ=255)
                                                                    gTCTT‑CCCCCACATGCTGTGGNGG‑TTTTCTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCa                      <  1:1726032/93‑1 (MQ=255)
                                                                    gTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCa                      >  2:2664002/1‑93 (MQ=255)
                                                                     tCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAg                     <  1:2130069/93‑1 (MQ=255)
                                                                       tt‑CCCCCACATGTTGTGGGGGGGTTTTTT‑TCCTCAATTTGTCTGCTGCTTAATGCATTGCAGATGAATTGCTTCCGTTATACTATCGTCAggt                   >  2:8988974/1‑91 (MQ=255)
                                                                       tt‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGtt                   <  2:8198404/93‑1 (MQ=255)
                                                                        t‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTg                  >  2:9141329/1‑93 (MQ=255)
                                                                            cccACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATa               <  2:4159445/93‑1 (MQ=255)
                                                                             ccACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAg              <  2:3115002/93‑1 (MQ=255)
                                                                             ccACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAg              >  1:3451505/1‑93 (MQ=255)
                                                                              cacaTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGc             <  1:10012508/93‑1 (MQ=255)
                                                                               acaTGCTGTGGGGG‑TTTTTTTATCCTCATTTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg            >  2:7869549/1‑93 (MQ=255)
                                                                               acaTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg            >  1:9012510/1‑93 (MQ=255)
                                                                               acaTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg            <  1:2661609/93‑1 (MQ=255)
                                                                               acaTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg            >  2:3994400/1‑93 (MQ=255)
                                                                                caTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCgg           <  1:5650910/93‑1 (MQ=255)
                                                                                  tGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa         >  2:8673672/1‑93 (MQ=255)
                                                                                  tGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa         >  2:4864413/1‑93 (MQ=255)
                                                                                   gCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAg        >  1:6719574/1‑93 (MQ=255)
                                                                                    cTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGt       <  1:4503572/93‑1 (MQ=255)
                                                                                        tggggGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGGGTAtt    >  1:8478376/2‑93 (MQ=255)
                                                                                        tggggGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAtt    >  2:1682765/2‑93 (MQ=255)
                                                                                        tggggGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAtt    >  2:3179045/2‑93 (MQ=255)
                                                                                         ggggGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAttt   >  2:5117879/1‑93 (MQ=255)
                                                                                          ggggTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTa  <  2:1382760/93‑1 (MQ=255)
                                                                                          gggTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTa  <  1:8933573/93‑1 (MQ=255)
                                                                                             |                                                                                         
CTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTA  >  NC_000913/4103868‑4104049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 280 total aligned reads displayed.
AGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCT  >  NC_000913/4103874‑4104060
                                                                                              |                                                                                             
AGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTA                                                                                               >  SRR4302540.9547738/1‑94 (MQ=60)
 GTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCCGTGGGGGGTTTTTTTT                                                                                               >  SRR4302540.5497726/1‑94 (MQ=60)
  TAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATC                                                                                            >  SRR4302540.3141755/1‑94 (MQ=60)
  TAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATC                                                                                            <  SRR4302540.4621490/94‑1 (MQ=60)
   AGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCC                                                                                           >  SRR4302540.7703141/1‑94 (MQ=60)
   AGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCC                                                                                           >  SRR4302540.8046886/1‑94 (MQ=60)
    GTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCT                                                                                          >  SRR4302540.6962857/1‑94 (MQ=60)
    GTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCT                                                                                          >  SRR4302540.2089546/1‑94 (MQ=60)
    GTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCT                                                                                          >  SRR4302540.1201383/1‑94 (MQ=60)
    GTAGCAACTCACGTGCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCT                                                                                          <  SRR4302540.5575455/94‑1 (MQ=60)
     TAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTC                                                                                         <  SRR4302540.531201/94‑1 (MQ=60)
     TAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTC                                                                                         <  SRR4302540.2666847/94‑1 (MQ=60)
      AGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCA                                                                                        <  SRR4302540.7479981/94‑1 (MQ=60)
      AGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCA                                                                                        <  SRR4302540.7479982/94‑1 (MQ=60)
      AGCAACTCACGTTCCCAGTAGCAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCA                                                                                        >  SRR4302540.8871316/1‑94 (MQ=60)
       GCACCTCACGTTCACAGTAGTAAACCCGGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCA                                                                                        <  SRR4302540.4951617/94‑1 (MQ=60)
       GCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAA                                                                                       <  SRR4302540.4083234/94‑1 (MQ=60)
       GCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAA                                                                                       >  SRR4302540.6163317/1‑94 (MQ=60)
       GCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAA                                                                                       <  SRR4302540.2389512/94‑1 (MQ=60)
       GCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAA                                                                                       <  SRR4302540.9640235/94‑1 (MQ=60)
        CAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAA                                                                                       <  SRR4302540.734958/94‑1 (MQ=60)
        CAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAAT                                                                                      <  SRR4302540.8309121/94‑1 (MQ=60)
         AACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATT                                                                                     <  SRR4302540.5821624/94‑1 (MQ=60)
         AACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATT                                                                                     <  SRR4302540.9277816/94‑1 (MQ=60)
         AACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATT                                                                                     >  SRR4302540.4058328/1‑94 (MQ=60)
         AACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATT                                                                                     >  SRR4302540.360253/1‑94 (MQ=60)
          ACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTT                                                                                    >  SRR4302540.4651712/1‑94 (MQ=60)
          ACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTT                                                                                    >  SRR4302540.2144220/1‑94 (MQ=60)
          ACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTT                                                                                    <  SRR4302540.6978175/94‑1 (MQ=60)
          ACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTT                                                                                    <  SRR4302540.4415281/94‑1 (MQ=60)
          ACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTT                                                                                    <  SRR4302540.7955449/94‑1 (MQ=60)
           CTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTT                                                                                    <  SRR4302540.8555893/94‑1 (MQ=60)
           CTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGGTTTTTTTttctccatttt                                                                                    >  SRR4302540.1976878/1‑83 (MQ=60)
            TCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTTG                                                                                   <  SRR4302540.3320692/94‑1 (MQ=60)
             CACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCC                                                                                 >  SRR4302540.3673919/1‑94 (MQ=60)
             CACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCC                                                                                 >  SRR4302540.1353863/1‑94 (MQ=60)
             CACGTTCCCAGTAGTAAACCCTGTTTTCCTCGCCATAGTCACCATCCCCGTCCTCCCCCTCATGCCG‑‑GGGGGGTCTTTCTATCCTCAATTTGCC                                                                                 >  SRR4302540.9054189/1‑94 (MQ=37)
               CGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTG                                                                               <  SRR4302540.9620695/94‑1 (MQ=60)
               CGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTG                                                                               <  SRR4302540.8995790/94‑1 (MQ=60)
                GTTCCCAGTAGTAAACCCTGTTTTCCTTACCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGT                                                                              >  SRR4302540.6805801/1‑94 (MQ=60)
                 TTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGGCACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCT                                                                             <  SRR4302540.4348412/94‑1 (MQ=60)
                  TCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTG                                                                            <  SRR4302540.1983236/94‑1 (MQ=60)
                  TCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTG                                                                            >  SRR4302540.7889612/1‑94 (MQ=60)
                   CCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGC                                                                           <  SRR4302540.9667255/94‑1 (MQ=60)
                   CCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGC                                                                           <  SRR4302540.5212802/94‑1 (MQ=60)
                    CCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCT                                                                          <  SRR4302540.7640137/94‑1 (MQ=60)
                     CAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCCCATGCTGT‑GGGGG‑GTTTTTTATCCTCAATTTGCCTGCTGCTT                                                                         >  SRR4302540.3881702/1‑94 (MQ=60)
                     CAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTT                                                                         <  SRR4302540.9378024/94‑1 (MQ=60)
                      AGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTA                                                                        <  SRR4302540.4400605/94‑1 (MQ=60)
                      AGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTA                                                                        <  SRR4302540.4400608/94‑1 (MQ=60)
                       GTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAA                                                                       >  SRR4302540.7399391/1‑94 (MQ=60)
                        TAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAA                                                                       <  SRR4302540.9911096/94‑1 (MQ=60)
                        TAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAAT                                                                      >  SRR4302540.6758143/1‑94 (MQ=60)
                        TAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAAT                                                                      <  SRR4302540.3966600/94‑1 (MQ=60)
                        TAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAAT                                                                      <  SRR4302540.4056666/94‑1 (MQ=60)
                        TAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAAT                                                                      <  SRR4302540.542525/94‑1 (MQ=60)
                        TAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAAT                                                                      <  SRR4302540.877940/94‑1 (MQ=60)
                        TAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAAT                                                                      <  SRR4302540.1547634/94‑1 (MQ=60)
                        TAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAAT                                                                      <  SRR4302540.10045474/94‑1 (MQ=60)
                         AGTAAACCCTGTTTTCCTTGCCATAGACCCCATCCCTGTCTTCCCCCCCATGCTGT‑GGGGG‑GTTTTTTATTCTCACTTTGCCTGCTGCTTACTG                                                                     >  SRR4302540.7613684/1‑94 (MQ=60)
                         AGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATG                                                                     <  SRR4302540.4354296/94‑1 (MQ=60)
                          GTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCTCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAACGC                                                                    >  SRR4302540.2794827/1‑94 (MQ=60)
                          GTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGC                                                                    <  SRR4302540.1618456/94‑1 (MQ=60)
                          GTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGC                                                                    >  SRR4302540.8898162/1‑94 (MQ=60)
                          GTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGC                                                                    >  SRR4302540.5015045/1‑94 (MQ=60)
                          GTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGC                                                                    >  SRR4302540.4368529/1‑94 (MQ=60)
                          GTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGC                                                                    >  SRR4302540.9247292/1‑94 (MQ=60)
                           TAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCA                                                                   <  SRR4302540.10006701/94‑1 (MQ=60)
                           TAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCA                                                                   <  SRR4302540.2818925/94‑1 (MQ=60)
                            AAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAT                                                                  <  SRR4302540.5965194/94‑1 (MQ=60)
                            AAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAT                                                                  <  SRR4302540.7677929/94‑1 (MQ=60)
                            AAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAT                                                                  >  SRR4302540.720299/1‑94 (MQ=60)
                            AAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAT                                                                  >  SRR4302540.9202574/1‑94 (MQ=60)
                            AAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑GTTTTTTATCCTNANTTTGCCTGCTGgtttattcat                                                                  >  SRR4302540.2140495/1‑84 (MQ=60)
                             AACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATT                                                                 >  SRR4302540.4961757/1‑94 (MQ=60)
                             AACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATT                                                                 <  SRR4302540.3858047/94‑1 (MQ=60)
                              ACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTG                                                                <  SRR4302540.5381246/94‑1 (MQ=60)
                               CCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGC                                                               >  SRR4302540.4870026/1‑94 (MQ=60)
                                CCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCA                                                              >  SRR4302540.5876587/1‑94 (MQ=60)
                                CCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCA                                                              <  SRR4302540.10024609/94‑1 (MQ=60)
                                CCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCA                                                              <  SRR4302540.5354782/94‑1 (MQ=60)
                                CCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCA                                                              >  SRR4302540.10145800/1‑94 (MQ=60)
                                 CTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAG                                                             >  SRR4302540.2612575/1‑94 (MQ=60)
                                 CTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAG                                                             <  SRR4302540.9080277/94‑1 (MQ=60)
                                 CTGTGTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCA                                                              <  SRR4302540.1905390/94‑1 (MQ=60)
                                  TGTTTTCCTTGCCATAGACACCCTCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCCATTTGCCTGCTGCTTAATGCATTGCAGA                                                            >  SRR4302540.7024398/1‑94 (MQ=60)
                                   cgTTTCCTTGCGATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCGGCTGCTTAATGCATTGCAGAT                                                           <  SRR4302540.2976916/92‑1 (MQ=60)
                                   GTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGAT                                                           >  SRR4302540.6601177/1‑94 (MQ=60)
                                   GTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGAT                                                           <  SRR4302540.2093009/94‑1 (MQ=60)
                                    TTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATG                                                          <  SRR4302540.7532557/94‑1 (MQ=60)
                                    TTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATG                                                          <  SRR4302540.6586736/94‑1 (MQ=60)
                                    TTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATG                                                          >  SRR4302540.9486418/1‑94 (MQ=60)
                                      TTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAT                                                        <  SRR4302540.9421529/94‑1 (MQ=60)
                                      TTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAT                                                        <  SRR4302540.8032838/94‑1 (MQ=60)
                                        CCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTT                                                      <  SRR4302540.7234451/94‑1 (MQ=60)
                                        CCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑GTGTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTT                                                      >  SRR4302540.8951251/1‑94 (MQ=60)
                                         CTTGCCATAGACCCCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTG                                                     <  SRR4302540.2105789/94‑1 (MQ=60)
                                         CTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTG                                                     <  SRR4302540.3004209/94‑1 (MQ=60)
                                          TTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGC                                                    >  SRR4302540.6272976/1‑94 (MQ=60)
                                             CCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTT                                                  <  SRR4302540.3415149/94‑1 (MQ=60)
                                             CCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTT                                                  <  SRR4302540.2032474/94‑1 (MQ=60)
                                             CCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTC                                                 >  SRR4302540.9156004/1‑94 (MQ=60)
                                             CCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTC                                                 >  SRR4302540.7781983/1‑94 (MQ=60)
                                              TATAGTCACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCC                                                <  SRR4302540.3583374/94‑1 (MQ=60)
                                              CATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCC                                                <  SRR4302540.6318741/94‑1 (MQ=60)
                                              CATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCC                                                >  SRR4302540.6002682/1‑94 (MQ=60)
                                              CATAGACACCATCCCTGTCTGCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCC                                                <  SRR4302540.8654511/94‑1 (MQ=60)
                                               ATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCG                                               <  SRR4302540.4553914/94‑1 (MQ=60)
                                               ATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCG                                               >  SRR4302540.6587892/1‑94 (MQ=60)
                                               ATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑GTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCgtgcg                                               >  SRR4302540.4462645/1‑89 (MQ=60)
                                                TAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGT                                              <  SRR4302540.2708330/94‑1 (MQ=60)
                                                TAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGT                                              <  SRR4302540.8785514/94‑1 (MQ=60)
                                                 AGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTT                                             >  SRR4302540.1831262/1‑94 (MQ=60)
                                                 AGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTT                                             <  SRR4302540.2392997/94‑1 (MQ=60)
                                                  GACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTA                                            >  SRR4302540.2633766/1‑94 (MQ=60)
                                                   ACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTAT                                           <  SRR4302540.5649653/94‑1 (MQ=60)
                                                    CACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATA                                          <  SRR4302540.1080615/94‑1 (MQ=60)
                                                    CACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATA                                          <  SRR4302540.5664781/94‑1 (MQ=60)
                                                    CACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATA                                          <  SRR4302540.2205598/94‑1 (MQ=60)
                                                      CCATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACT                                        <  SRR4302540.1699396/94‑1 (MQ=60)
                                                       CATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTA                                       <  SRR4302540.5076303/94‑1 (MQ=60)
                                                        ATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGTTTCCTTTATACTCG                                      >  SRR4302540.8486312/1‑94 (MQ=60)
                                                        ATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAG                                      >  SRR4302540.9883268/1‑94 (MQ=60)
                                                        ATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAG                                      <  SRR4302540.462886/94‑1 (MQ=60)
                                                        ATCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAG                                      >  SRR4302540.8486311/1‑94 (MQ=60)
                                                         TCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGC                                     <  SRR4302540.242389/94‑1 (MQ=60)
                                                         TCCCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGC                                     >  SRR4302540.1209650/1‑94 (MQ=60)
                                                           CCTGTCTTTCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCATGCTGCTTAATGCATTGCAGATGATTTGATTATGTTATACTCGCGT                                   >  SRR4302540.5171487/1‑94 (MQ=60)
                                                           CCTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCATGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGT                                   >  SRR4302540.5171488/1‑94 (MQ=60)
                                                            CTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTC                                  >  SRR4302540.2307455/1‑94 (MQ=60)
                                                            CTGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTC                                  >  SRR4302540.2462742/1‑94 (MQ=60)
                                                             TGTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCA                                 <  SRR4302540.8706227/94‑1 (MQ=60)
                                                              GTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAG                                >  SRR4302540.9498132/1‑94 (MQ=60)
                                                              GTCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAG                                <  SRR4302540.6430327/94‑1 (MQ=60)
                                                               TCTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGT                               <  SRR4302540.371679/94‑1 (MQ=60)
                                                                CTTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTT                              >  SRR4302540.10129560/1‑94 (MQ=60)
                                                                 TTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTT                              >  SRR4302540.5998006/1‑94 (MQ=60)
                                                                 TTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTG                             <  SRR4302540.5718717/94‑1 (MQ=60)
                                                                 TTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTG                             >  SRR4302540.5115201/1‑94 (MQ=60)
                                                                 TTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTG                             >  SRR4302540.7864356/1‑94 (MQ=60)
                                                                 TTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTG                             <  SRR4302540.9383009/94‑1 (MQ=60)
                                                                 TTCCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTG                             >  SRR4302540.2623531/1‑94 (MQ=60)
                                                                   TCCCCACATGCTGT‑‑GGGGCTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGAT                           <  SRR4302540.5577433/94‑1 (MQ=60)
                                                                   CCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGAT                           <  SRR4302540.1772318/94‑1 (MQ=60)
                                                                   CCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGAT                           <  SRR4302540.8803928/94‑1 (MQ=60)
                                                                   CCCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGGTATACTAGCGTCAGTTGAT                           >  SRR4302540.9076276/1‑94 (MQ=60)
                                                                   CCCCCACATGCTGT‑GGGGG‑TTTTTGTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGAT                           <  SRR4302540.1772317/94‑1 (MQ=60)
                                                                    CCCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATGGCAGATGATTTGCTTCCGTTATACTAGCTTCACTTGATC                          >  SRR4302540.335495/1‑94 (MQ=60)
                                                                     CCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAG                         <  SRR4302540.3407372/94‑1 (MQ=60)
                                                                     CCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAG                         >  SRR4302540.3489048/1‑94 (MQ=60)
                                                                     CCCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAG                         <  SRR4302540.8549703/94‑1 (MQ=60)
                                                                      CCACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGC                        <  SRR4302540.4193104/94‑1 (MQ=60)
                                                                       CACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCG                       <  SRR4302540.3708561/94‑1 (MQ=60)
                                                                       CACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCG                       <  SRR4302540.1287618/94‑1 (MQ=60)
                                                                        ACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGG                      <  SRR4302540.2690480/94‑1 (MQ=60)
                                                                        ACATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGG                      >  SRR4302540.7471249/1‑94 (MQ=60)
                                                                         CATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGG                     >  SRR4302540.3902786/1‑94 (MQ=60)
                                                                         CATGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGG                     <  SRR4302540.5713125/94‑1 (MQ=60)
                                                                           TGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAG                   >  SRR4302540.6793728/1‑94 (MQ=60)
                                                                           TGCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAG                   <  SRR4302540.6068219/94‑1 (MQ=60)
                                                                           TGCTGT‑GGGGG‑GTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAG                   >  SRR4302540.3074278/1‑94 (MQ=60)
                                                                            GCTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGT                  <  SRR4302540.9121409/94‑1 (MQ=60)
                                                                             CTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTA                 >  SRR4302540.7509648/1‑94 (MQ=60)
                                                                             CTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTA                 >  SRR4302540.4178285/1‑94 (MQ=60)
                                                                             CTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTA                 <  SRR4302540.4552392/94‑1 (MQ=60)
                                                                             CTGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCACATGATTTGCTTCCGTTCTACTAGCGTCCGTTGATAGAGGGAGTT                 >  SRR4302540.4178284/1‑94 (MQ=60)
                                                                              TGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAT                >  SRR4302540.7179071/1‑94 (MQ=60)
                                                                              TGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAT                <  SRR4302540.8332297/94‑1 (MQ=60)
                                                                              TGT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAT                >  SRR4302540.3866086/1‑94 (MQ=60)
                                                                               GT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGGGTATT               >  SRR4302540.8576851/1‑94 (MQ=60)
                                                                               GT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATT               >  SRR4302540.8576852/1‑94 (MQ=60)
                                                                               GT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATT               <  SRR4302540.6834284/94‑1 (MQ=60)
                                                                               GT‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATT               >  SRR4302540.314028/1‑94 (MQ=60)
                                                                                T‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTT              >  SRR4302540.352913/1‑94 (MQ=60)
                                                                                T‑GGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGCTGATAGCGGGAGTATTT              >  SRR4302540.352912/1‑94 (MQ=60)
                                                                                   GGGGGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGCTGATAGCGGGAGTATTTA             >  SRR4302540.961102/1‑94 (MQ=60)
                                                                                    GGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTAT            <  SRR4302540.9037981/94‑1 (MQ=60)
                                                                                    GGGGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTAT            >  SRR4302540.1733940/1‑94 (MQ=60)
                                                                                    GGGGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTAT            <  SRR4302540.779594/94‑1 (MQ=60)
                                                                                    GGGGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTAT            <  SRR4302540.819442/94‑1 (MQ=60)
                                                                                     GGGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATG           <  SRR4302540.7243264/94‑1 (MQ=60)
                                                                                     GGGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATG           <  SRR4302540.3012805/94‑1 (MQ=60)
                                                                                      GGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGA          <  SRR4302540.4148366/94‑1 (MQ=60)
                                                                                      GGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGA          <  SRR4302540.4526867/94‑1 (MQ=60)
                                                                                      GGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGA          <  SRR4302540.4148367/94‑1 (MQ=60)
                                                                                      GGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGA          <  SRR4302540.7588372/94‑1 (MQ=60)
                                                                                       GTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAA         <  SRR4302540.2671633/94‑1 (MQ=60)
                                                                                       GTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAA         <  SRR4302540.1018897/94‑1 (MQ=60)
                                                                                        TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAAT        <  SRR4302540.3479835/94‑1 (MQ=60)
                                                                                        TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAAT        <  SRR4302540.8494319/94‑1 (MQ=60)
                                                                                          TTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCA      <  SRR4302540.5725459/94‑1 (MQ=60)
                                                                                          TTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCA      <  SRR4302540.7912741/94‑1 (MQ=60)
                                                                                          TTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCA      >  SRR4302540.3477959/1‑94 (MQ=60)
                                                                                          TTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCA      <  SRR4302540.4709071/94‑1 (MQ=60)
                                                                                           TTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAA     >  SRR4302540.7854493/1‑94 (MQ=60)
                                                                                           TTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAA     <  SRR4302540.323793/94‑1 (MQ=60)
                                                                                            TTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAAT    >  SRR4302540.733587/1‑94 (MQ=60)
                                                                                            TTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAAT    <  SRR4302540.7792695/94‑1 (MQ=60)
                                                                                             TTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATC   <  SRR4302540.2482177/94‑1 (MQ=60)
                                                                                              TATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCT  >  SRR4302540.182806/1‑94 (MQ=60)
                                                                                              |                                                                                             
AGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGT‑GGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCT  >  NC_000913/4103874‑4104060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑