Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,161,702	C→G	A162G (GCA→GGA)	btuB →	BtuB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,161,702	0	C	G	100.0%	1177.3 / NA	360	A162G (GCA→GGA)	btuB	BtuB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (185/175); total (185/175)

Only 100 of 382 total aligned reads displayed.

GGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGCAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATT  >  NC_000913/4161612‑4161791

ggCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTcaggag                                                                                         <  2:7991209/93‑1 (MQ=255)

    gcgcTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTg                                                                                     <  1:2192898/93‑1 (MQ=255)

    gcgcTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTg                                                                                     <  1:784145/93‑1 (MQ=255)

    gcgcTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTg                                                                                     >  1:955672/1‑93 (MQ=255)

    gcgcTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTg                                                                                     >  2:2205473/1‑93 (MQ=255)

    gcgcTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTg                                                                                     >  2:5152914/1‑93 (MQ=255)

     cgcTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTgg                                                                                    <  2:4655451/93‑1 (MQ=255)

     cgcTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGCTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTgg                                                                                    <  2:5303932/93‑1 (MQ=255)

      gcTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTggg                                                                                   <  2:3169560/93‑1 (MQ=255)

       cTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGTGATGAACCCGGAACGGAAATTTCAGGAGGGTgggg                                                                                  >  2:5672186/1‑93 (MQ=255)

        tCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGa                                                                                 <  1:9191378/93‑1 (MQ=255)

        tCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGa                                                                                 >  1:4920029/1‑93 (MQ=255)

         ccGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGaa                                                                                <  1:5305402/93‑1 (MQ=255)

         ccGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGGGGGGaa                                                                                >  1:3166430/1‑93 (MQ=255)

          cGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAg                                                                               >  1:5509189/1‑93 (MQ=255)

           gCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGc                                                                              <  1:10037831/93‑1 (MQ=255)

           gCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGc                                                                              >  1:6680397/1‑93 (MQ=255)

            cTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCa                                                                             <  2:7057256/93‑1 (MQ=255)

            cTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCa                                                                             <  1:2327832/93‑1 (MQ=255)

             tGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCaa                                                                            <  2:2777834/93‑1 (MQ=255)

              gTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGCACGGAAATTTCAGGAGGGTGGGGAAGCaaa                                                                           >  2:8145604/1‑92 (MQ=255)

              gTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAAt                                                                           >  2:3897990/1‑93 (MQ=255)

              gTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAAt                                                                           >  2:5483010/1‑93 (MQ=255)

              gTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAAt                                                                           >  2:7503182/1‑93 (MQ=255)

               tttATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATa                                                                          >  1:5112296/1‑93 (MQ=255)

               tttATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATa                                                                          >  1:1886536/1‑93 (MQ=255)

                  aTGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGtt                                                                       >  1:6613057/1‑93 (MQ=255)

                   tGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTa                                                                      <  2:9282054/93‑1 (MQ=255)

                   tGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTa                                                                      >  2:8357069/1‑93 (MQ=255)

                   tGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTa                                                                      >  1:942950/1‑93 (MQ=255)

                     gTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATc                                                                    >  2:3705650/1‑93 (MQ=255)

                     gTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATc                                                                    >  1:7786894/1‑93 (MQ=255)

                      ttCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCa                                                                   <  1:7770830/93‑1 (MQ=255)

                      ttCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCa                                                                   >  2:6403726/1‑93 (MQ=255)

                        ccGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGa                                                                 <  2:4768327/93‑1 (MQ=255)

                         cGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGaa                                                                >  2:1079368/1‑93 (MQ=255)

                         cGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGaa                                                                <  2:91864/93‑1 (MQ=255)

                           aTGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACt                                                              >  1:150330/1‑93 (MQ=255)

                            tGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTa                                                             >  2:7630657/1‑93 (MQ=255)

                             gCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTat                                                            <  1:1459565/93‑1 (MQ=255)

                               aaTAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTatga                                                          <  2:5064463/93‑1 (MQ=255)

                               aaTAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTatga                                                          <  2:7127455/93‑1 (MQ=255)

                               aaTAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTatga                                                          <  1:6396318/93‑1 (MQ=255)

                               aaTAGGCGGGGTGGTGAATATCATCACGAAGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTatga                                                          <  1:7684938/93‑1 (MQ=255)

                                aTAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTatgat                                                         >  1:9736039/1‑93 (MQ=255)

                                  aGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGt                                                       >  2:778023/1‑93 (MQ=255)

                                   ggCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGtc                                                      >  1:1570637/1‑93 (MQ=255)

                                    gCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGtct                                                     <  1:747205/93‑1 (MQ=255)

                                     ccgggTGGTGAATATCATCACGACTCGCGATGAACCCGGAACGGAAATTTCAGGAGTGTGGGGAAGTAATAGTTATCAGACCTATGATGtctc                                                    <  1:2980470/91‑1 (MQ=255)

                                     cGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGtctc                                                    >  2:1266620/1‑93 (MQ=255)

                                     cGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGtctc                                                    >  1:6862270/1‑93 (MQ=255)

                                       gggTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTa                                                  >  2:6821427/1‑93 (MQ=255)

                                       gggTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTa                                                  >  2:6110319/1‑93 (MQ=255)

                                        ggtggtGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTAc                                                 >  1:5938160/1‑93 (MQ=255)

                                         gtggtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACg                                                <  1:7296523/93‑1 (MQ=255)

                                          tggtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgc                                               >  1:9875108/1‑93 (MQ=255)

                                          tggtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgc                                               >  1:7219266/1‑93 (MQ=255)

                                          tggtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgc                                               >  2:8624422/1‑93 (MQ=255)

                                          tggtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgc                                               >  2:3763305/1‑93 (MQ=255)

                                          tggtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgc                                               >  1:5227764/1‑93 (MQ=255)

                                           ggtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgca                                              >  1:7916642/1‑93 (MQ=255)

                                            gtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgcag                                             <  2:5323726/93‑1 (MQ=255)

                                            gtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgcag                                             <  1:4444761/93‑1 (MQ=255)

                                            gtgAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgcag                                             >  2:9671937/1‑93 (MQ=255)

                                              gAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgcagca                                           >  1:2711928/1‑93 (MQ=255)

                                              gAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgcagca                                           >  1:2039880/1‑93 (MQ=255)

                                              gAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACgcagca                                           >  2:190881/1‑93 (MQ=255)

                                               aaTATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGcaa                                          >  2:8712185/1‑93 (MQ=255)

                                               aaTATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGcaa                                          >  2:4170851/1‑93 (MQ=255)

                                                atatCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGctac                                         <  2:8966580/93‑1 (MQ=255)

                                                atatCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGcaac                                         >  2:2590077/1‑93 (MQ=255)

                                                 tatCATCACGACGCGCGATGAACGCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGGTATCAGAACTATGATGTCTCGACGCAGcaaca                                        <  1:4247303/93‑1 (MQ=255)

                                                 aatcatcACGACGCGCGATGAGCCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGcaaca                                        <  1:2282486/92‑1 (MQ=255)

                                                  atcatcACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGcaacaa                                       <  1:10002817/93‑1 (MQ=255)

                                                   tcatcaCGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCaacaac                                      <  2:3998160/93‑1 (MQ=255)

                                                    catcaCGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACt                                     <  1:3572535/93‑1 (MQ=255)

                                                     atcaCGACGGGCGATGAACCCGGAAAGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTg                                    <  2:6953820/93‑1 (MQ=255)

                                                      tcaCGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTgg                                   <  1:5652138/93‑1 (MQ=255)

                                                      tcaCGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTgg                                   >  1:8636989/1‑93 (MQ=255)

                                                      tcaCGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTgg                                   >  2:6521460/1‑93 (MQ=255)

                                                            cgcgcgATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATa                             <  2:308149/93‑1 (MQ=255)

                                                             gcgcgATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATaa                            <  1:8138476/93‑1 (MQ=255)

                                                             gcgcgATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATaa                            <  2:9454442/93‑1 (MQ=255)

                                                                 gATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGaca                        <  1:123056/93‑1 (MQ=255)

                                                                  aTGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGacac                       <  2:1624628/93‑1 (MQ=255)

                                                                    gAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACgg                     <  1:8439908/93‑1 (MQ=255)

                                                                     aaCCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACggg                    >  1:8849148/1‑93 (MQ=255)

                                                                        ccGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTaa                 <  1:8273269/93‑1 (MQ=255)

                                                                        ccGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTaa                 >  1:7148327/1‑93 (MQ=255)

                                                                        ccGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTaa                 >  1:587119/1‑93 (MQ=255)

                                                                         cggaacggaaATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAAc                <  1:47136/93‑1 (MQ=255)

                                                                          ggaacggaaATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACg               <  2:3347046/93‑1 (MQ=255)

                                                                              cggaaATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGt           <  1:3385105/93‑1 (MQ=255)

                                                                               ggaaATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGtt          >  2:5881115/1‑93 (MQ=255)

                                                                                gaaATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTg         <  2:1724961/93‑1 (MQ=255)

                                                                                 aaaTTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTgg        >  1:3881680/1‑93 (MQ=255)

                                                                                   aTTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGc      >  2:4327166/1‑93 (MQ=255)

                                                                                    tttCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCg     >  1:8159906/1‑93 (MQ=255)

                                                                                     ttCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGa    <  1:6122651/93‑1 (MQ=255)

                                                                                      tCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGAt   <  2:7328453/93‑1 (MQ=255)

GGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGCAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATT  >  NC_000913/4161612‑4161791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 216 total aligned reads displayed.

GTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGCAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTATGC  >  NC_000913/4161609‑4161795

GTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGG                                                                                               <  SRR4302540.3296960/94‑1 (MQ=60)

GTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGG                                                                                               >  SRR4302540.4685773/1‑94 (MQ=60)

GTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGG                                                                                               <  SRR4302540.1990435/94‑1 (MQ=60)

GTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGG                                                                                               >  SRR4302540.4919335/1‑94 (MQ=60)

 TGGGCCGCGCTCCGCTGTTTATGGTTCCGCTGCAATAAGCGGGGTGGTGAATATCATCACGACGCGCGCTGAACCCGGCACGGAAATTTCAGAA                                                                                              >  SRR4302540.6496909/1‑94 (MQ=60)

 TGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGA                                                                                              <  SRR4302540.6612534/94‑1 (MQ=60)

 GGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGA                                                                                              <  SRR4302540.582678/94‑1 (MQ=60)

  GGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAG                                                                                             <  SRR4302540.7362318/94‑1 (MQ=60)

  GGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAG                                                                                             <  SRR4302540.182573/94‑1 (MQ=60)

   GGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGG                                                                                            <  SRR4302540.8494777/94‑1 (MQ=60)

    GCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGG                                                                                           <  SRR4302540.2189271/94‑1 (MQ=60)

     CCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGT                                                                                          <  SRR4302540.2352598/94‑1 (MQ=60)

      CGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTG                                                                                         <  SRR4302540.10067292/94‑1 (MQ=60)

      CGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTG                                                                                         <  SRR4302540.9182191/94‑1 (MQ=60)

      CGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTG                                                                                         >  SRR4302540.965578/1‑94 (MQ=60)

       GCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGG                                                                                        <  SRR4302540.792482/94‑1 (MQ=60)

       GCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGG                                                                                        <  SRR4302540.9957037/94‑1 (MQ=60)

       GCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGG                                                                                        <  SRR4302540.2216583/94‑1 (MQ=60)

       GCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGG                                                                                        <  SRR4302540.1981065/94‑1 (MQ=60)

        CGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGG                                                                                       <  SRR4302540.7794303/94‑1 (MQ=60)

        CGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGG                                                                                       <  SRR4302540.2593155/94‑1 (MQ=60)

        CGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGG                                                                                       <  SRR4302540.8812261/94‑1 (MQ=60)

         GCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGGGGGTGGGG                                                                                      >  SRR4302540.8040393/1‑94 (MQ=60)

         GCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGG                                                                                      >  SRR4302540.7984061/1‑94 (MQ=60)

         GCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGG                                                                                      >  SRR4302540.5124404/1‑94 (MQ=60)

          CTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGA                                                                                     >  SRR4302540.4973029/1‑94 (MQ=60)

          CTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGA                                                                                     >  SRR4302540.4515192/1‑94 (MQ=60)

           TCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAG                                                                                    >  SRR4302540.5176295/1‑94 (MQ=60)

           TCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAA                                                                                    <  SRR4302540.9301614/94‑1 (MQ=60)

           TCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGGGGGGAA                                                                                    >  SRR4302540.3200861/1‑94 (MQ=60)

            CCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAG                                                                                   >  SRR4302540.5569863/1‑94 (MQ=60)

            CCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAG                                                                                   <  SRR4302540.5870813/94‑1 (MQ=60)

            CCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAG                                                                                   <  SRR4302540.2219471/94‑1 (MQ=60)

            CCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAG                                                                                   <  SRR4302540.5363457/94‑1 (MQ=60)

            CCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACACGCGATGAACCCGGAACGGAGATTTCAGGAGGGAGGGGAAG                                                                                   >  SRR4302540.6181984/1‑94 (MQ=60)

            CCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGGGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAG                                                                                   >  SRR4302540.5627689/1‑94 (MQ=60)

             CGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGC                                                                                  <  SRR4302540.7350603/94‑1 (MQ=60)

             CGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGC                                                                                  >  SRR4302540.6754190/1‑94 (MQ=60)

             CGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGC                                                                                  >  SRR4302540.6195807/1‑94 (MQ=60)

              GCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCA                                                                                 <  SRR4302540.1551579/94‑1 (MQ=60)

              GCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCA                                                                                 >  SRR4302540.6577887/1‑94 (MQ=60)

              GCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCA                                                                                 <  SRR4302540.4911852/94‑1 (MQ=60)

              GCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCA                                                                                 <  SRR4302540.10154555/94‑1 (MQ=60)

              GCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCA                                                                                 >  SRR4302540.3594790/1‑94 (MQ=60)

              GCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGGGGGGAAGCA                                                                                 >  SRR4302540.2302137/1‑94 (MQ=60)

               CTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGACCGGAAATTTCAGGAGGGTGGGGAAGCAA                                                                                >  SRR4302540.545483/1‑94 (MQ=60)

               CTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAA                                                                                <  SRR4302540.2352903/94‑1 (MQ=60)

               CTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAA                                                                                >  SRR4302540.545482/1‑94 (MQ=60)

                TGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAGT                                                                               >  SRR4302540.3856062/1‑94 (MQ=60)

                TGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAAT                                                                               <  SRR4302540.9511589/94‑1 (MQ=60)

                TGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAAT                                                                               >  SRR4302540.7055514/1‑94 (MQ=60)

                TGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAAA                                                                               >  SRR4302540.6686297/1‑94 (MQ=60)

                 GTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATA                                                                              >  SRR4302540.781362/1‑94 (MQ=60)

                 GTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATA                                                                              >  SRR4302540.3140243/1‑94 (MQ=60)

                 GTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATA                                                                              <  SRR4302540.8615177/94‑1 (MQ=60)

                 GTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATA                                                                              <  SRR4302540.6012329/94‑1 (MQ=60)

                 GTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATA                                                                              >  SRR4302540.5167635/1‑94 (MQ=60)

                  TTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAG                                                                             <  SRR4302540.3138473/94‑1 (MQ=60)

                   TTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGT                                                                            <  SRR4302540.1487865/94‑1 (MQ=60)

                    TATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTT                                                                           <  SRR4302540.2461017/94‑1 (MQ=60)

                    TATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTT                                                                           >  SRR4302540.6686283/1‑94 (MQ=60)

                    TATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGGGGGGAAGCAATATTT                                                                           >  SRR4302540.7067114/1‑94 (MQ=60)

                    TATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGGGGGGAAGCAATAGTT                                                                           >  SRR4302540.6255174/1‑94 (MQ=60)

                     ATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTA                                                                          >  SRR4302540.5161766/1‑94 (MQ=60)

                     ATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTA                                                                          >  SRR4302540.9321650/1‑94 (MQ=60)

                     ATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTA                                                                          >  SRR4302540.952792/1‑94 (MQ=60)

                     ATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTA                                                                          <  SRR4302540.10142737/94‑1 (MQ=60)

                      TGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTAT                                                                         >  SRR4302540.432229/1‑94 (MQ=60)

                       GGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATC                                                                        >  SRR4302540.7877914/1‑94 (MQ=60)

                       GGTACCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATC                                                                        <  SRR4302540.2973714/94‑1 (MQ=60)

                        GTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCA                                                                       <  SRR4302540.9820007/94‑1 (MQ=60)

                        GTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCA                                                                       <  SRR4302540.1481393/94‑1 (MQ=60)

                         TTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAG                                                                      >  SRR4302540.8252905/1‑94 (MQ=60)

                         TTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGACGGTGGGGAAGCAATAGTTATCAA                                                                      >  SRR4302540.8252904/1‑94 (MQ=60)

                           CCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAA                                                                    <  SRR4302540.6766541/94‑1 (MQ=60)

                           CCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAA                                                                    <  SRR4302540.6580247/94‑1 (MQ=60)

                            CGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAAC                                                                   <  SRR4302540.5707975/94‑1 (MQ=60)

                            CGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAAC                                                                   <  SRR4302540.3224940/94‑1 (MQ=60)

                             GATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACT                                                                  >  SRR4302540.151879/1‑94 (MQ=60)

                                GCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATG                                                               <  SRR4302540.1475455/94‑1 (MQ=60)

                                 CAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGA                                                              >  SRR4302540.828563/1‑94 (MQ=60)

                                 CAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGA                                                              <  SRR4302540.3314279/94‑1 (MQ=60)

                                  AATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGAT                                                             >  SRR4302540.9850349/1‑94 (MQ=60)

                                  AATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGAT                                                             <  SRR4302540.7663416/94‑1 (MQ=60)

                                  AATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGAT                                                             <  SRR4302540.6718735/94‑1 (MQ=60)

                                  AATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGAT                                                             >  SRR4302540.9850350/1‑94 (MQ=60)

                                  AATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGAT                                                             <  SRR4302540.6467528/94‑1 (MQ=60)

                                  AATAGGCGGGGTGGTGAATATCATCACGAAGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGAT                                                             <  SRR4302540.7772081/94‑1 (MQ=60)

                                   ATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATG                                                            <  SRR4302540.1944070/94‑1 (MQ=60)

                                   ATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATG                                                            >  SRR4302540.7711729/1‑94 (MQ=60)

                                   ATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATG                                                            <  SRR4302540.2080712/94‑1 (MQ=60)

                                   ATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATG                                                            <  SRR4302540.8647530/94‑1 (MQ=60)

                                   ATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATG                                                            >  SRR4302540.4528780/1‑94 (MQ=60)

                                   ATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATG                                                            <  SRR4302540.8345309/94‑1 (MQ=60)

                                     AGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTC                                                          >  SRR4302540.1587851/1‑94 (MQ=60)

                                     AGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTC                                                          >  SRR4302540.8954227/1‑94 (MQ=60)

                                     AGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTC                                                          <  SRR4302540.7892598/94‑1 (MQ=60)

                                     AGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAACCAATAGTTATCAGAACTATGATGTC                                                          <  SRR4302540.8235503/94‑1 (MQ=60)

                                       GCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTC                                                        >  SRR4302540.6938324/1‑94 (MQ=60)

                                       GCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTC                                                        <  SRR4302540.755166/94‑1 (MQ=60)

                                        CGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCT                                                       <  SRR4302540.9959342/94‑1 (MQ=60)

                                        CGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCT                                                       >  SRR4302540.8776700/1‑94 (MQ=60)

                                        CGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCT                                                       >  SRR4302540.4377245/1‑94 (MQ=60)

                                        CCGGGTGGTGAATATCATCACGACTCGCGATGAACCCGGAACGGAAATTTCAGGAGTGTGGGGAAGTAATAGTTATCAGACCTATGATGTCTCT                                                       <  SRR4302540.3013385/94‑1 (MQ=60)

                                         GGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTA                                                      >  SRR4302540.1756852/1‑94 (MQ=60)

                                         GGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTA                                                      >  SRR4302540.740943/1‑94 (MQ=60)

                                         GGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGCGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTA                                                      >  SRR4302540.5943406/1‑94 (MQ=60)

                                          GGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTAC                                                     >  SRR4302540.1634821/1‑94 (MQ=60)

                                          GGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTAC                                                     >  SRR4302540.6003803/1‑94 (MQ=60)

                                            GTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGC                                                   >  SRR4302540.7818943/1‑94 (MQ=60)

                                            GTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGC                                                   >  SRR4302540.9849993/1‑94 (MQ=60)

                                            GTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGC                                                   >  SRR4302540.7299729/1‑94 (MQ=60)

                                            GTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGC                                                   >  SRR4302540.7865234/1‑94 (MQ=60)

                                             TGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCA                                                  >  SRR4302540.8008932/1‑94 (MQ=60)

                                             TGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCA                                                  >  SRR4302540.4913723/1‑94 (MQ=60)

                                              GGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAG                                                 >  SRR4302540.600085/1‑94 (MQ=60)

                                               GTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGC                                                <  SRR4302540.4492930/94‑1 (MQ=60)

                                               GTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGGGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGA                                                >  SRR4302540.1442462/1‑94 (MQ=60)

                                                TGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCA                                               >  SRR4302540.3550799/1‑94 (MQ=60)

                                                TGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCA                                               >  SRR4302540.2741172/1‑94 (MQ=60)

                                                TGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCA                                               <  SRR4302540.4467553/94‑1 (MQ=60)

                                                TGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCA                                               >  SRR4302540.2061861/1‑94 (MQ=60)

                                                 GAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAA                                              >  SRR4302540.7991550/1‑94 (MQ=60)

                                                  AATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTATACGCAGCAAC                                             >  SRR4302540.8751203/1‑94 (MQ=60)

                                                   ATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACA                                            <  SRR4302540.5813897/94‑1 (MQ=60)

                                                   ATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACA                                            <  SRR4302540.1404045/94‑1 (MQ=60)

                                                   ATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACA                                            <  SRR4302540.3335134/94‑1 (MQ=60)

                                                    TATCATCACGACGCGCGATGAACGCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGGTATCAGAACTATGATGTCTCGACGCAGCAACAA                                           <  SRR4302540.4293511/94‑1 (MQ=60)

                                                    TATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAA                                           >  SRR4302540.7278831/1‑94 (MQ=60)

                                                    TATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAA                                           >  SRR4302540.1547308/1‑94 (MQ=60)

                                                    AATCATCACGACGCGCGATGAGCCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAA                                           <  SRR4302540.2307013/94‑1 (MQ=60)

                                                     ATCATCACGACGCGCGATGAACCCGGCACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTAGGCCGCAACCAC                                          >  SRR4302540.1201276/1‑94 (MQ=60)

                                                     ATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAAC                                          <  SRR4302540.1074335/94‑1 (MQ=60)

                                                     ATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAAC                                          <  SRR4302540.10119336/94‑1 (MQ=60)

                                                     ATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAAC                                          >  SRR4302540.1529515/1‑94 (MQ=60)

                                                      TCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACT                                         <  SRR4302540.2166575/94‑1 (MQ=60)

                                                       CATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTG                                        >  SRR4302540.2260952/1‑94 (MQ=60)

                                                       CATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTG                                        <  SRR4302540.3611559/94‑1 (MQ=60)

                                                       CATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTG                                        >  SRR4302540.7655292/1‑94 (MQ=60)

                                                        ATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGG                                       >  SRR4302540.9607200/1‑94 (MQ=60)

                                                        ATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGG                                       >  SRR4302540.8737316/1‑94 (MQ=60)

                                                         TCACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGG                                      <  SRR4302540.5714368/94‑1 (MQ=60)

                                                          CACGANGCGCNATGAACCCGGNANGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGG                                     <  SRR4302540.9580863/94‑1 (MQ=60)

                                                          CACGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGG                                     >  SRR4302540.5331895/1‑94 (MQ=60)

                                                            CGACGCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGA                                   >  SRR4302540.2769748/1‑94 (MQ=60)

                                                             GACGCGCGATGAACCCGTAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGAT                                  <  SRR4302540.1492070/94‑1 (MQ=60)

                                                                GCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAG                               <  SRR4302540.8232935/94‑1 (MQ=60)

                                                                GCGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAG                               <  SRR4302540.7232668/94‑1 (MQ=60)

                                                                 CGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGA                              <  SRR4302540.5395048/94‑1 (MQ=60)

                                                                 CGCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGA                              <  SRR4302540.1929748/94‑1 (MQ=60)

                                                                  GCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGAC                             <  SRR4302540.5215100/94‑1 (MQ=60)

                                                                  GCGATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGAC                             <  SRR4302540.6671493/94‑1 (MQ=60)

                                                                   CGATGAACCCGGAACGGAAATTTCAGGAGGGCGGGGAAGCAATAGTTATCAGCACTATGATGTCTCTACGCAGCAACAACTGGGGGGTAAGACA                            >  SRR4302540.5017542/1‑94 (MQ=60)

                                                                    GATGACCCCGGAACGGAAATTGCAGGAGGGTGGGGAATCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACAC                           <  SRR4302540.8004086/94‑1 (MQ=60)

                                                                    GATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACAC                           >  SRR4302540.5955769/1‑94 (MQ=60)

                                                                    GATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACAC                           <  SRR4302540.124366/94‑1 (MQ=60)

                                                                     ATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACG                          <  SRR4302540.7454032/94‑1 (MQ=60)

                                                                     ATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACG                          <  SRR4302540.743341/94‑1 (MQ=60)

                                                                     ATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACG                          <  SRR4302540.2653673/94‑1 (MQ=60)

                                                                     ATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACG                          >  SRR4302540.7377442/1‑94 (MQ=60)

                                                                     ATGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACG                          >  SRR4302540.7377441/1‑94 (MQ=60)

                                                                      TGAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGG                         <  SRR4302540.9667822/94‑1 (MQ=60)

                                                                       GAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGG                        >  SRR4302540.8951521/1‑94 (MQ=60)

                                                                       GAACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGG                        <  SRR4302540.7163325/94‑1 (MQ=60)

                                                                        AACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGT                       >  SRR4302540.3925850/1‑94 (MQ=60)

                                                                         ACCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTA                      <  SRR4302540.6881294/94‑1 (MQ=60)

                                                                          CCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAA                     <  SRR4302540.8058135/94‑1 (MQ=60)

                                                                          CCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAA                     >  SRR4302540.7227983/1‑94 (MQ=60)

                                                                          CCCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAA                     >  SRR4302540.593453/1‑94 (MQ=60)

                                                                           CCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAAC                    <  SRR4302540.8369381/94‑1 (MQ=60)

                                                                           CCGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAAC                    <  SRR4302540.8489320/94‑1 (MQ=60)

                                                                           CCGGAACGGAAACTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATCTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAAC                    <  SRR4302540.8711368/94‑1 (MQ=60)

                                                                            CGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACG                   <  SRR4302540.47613/94‑1 (MQ=60)

                                                                            CGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACG                   >  SRR4302540.7931687/1‑94 (MQ=60)

                                                                            CGGAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACA                   <  SRR4302540.5280632/94‑1 (MQ=60)

                                                                              GAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCT                 <  SRR4302540.5616884/94‑1 (MQ=60)

                                                                              GAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCT                 >  SRR4302540.3573294/1‑94 (MQ=60)

                                                                              GAACGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCT                 <  SRR4302540.9232750/94‑1 (MQ=60)

                                                                                ACGGAAATTTCAGGAGGGGGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGT               >  SRR4302540.7867951/1‑94 (MQ=60)

                                                                                 CGGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTT              <  SRR4302540.3422047/94‑1 (MQ=60)

                                                                                 AGGAAATTTCAGGAGGGTGGGGAAGCAATAGGTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTT              <  SRR4302540.7899159/94‑1 (MQ=60)

                                                                                  GGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTG             <  SRR4302540.1206815/94‑1 (MQ=60)

                                                                                  GGAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGGAACGCTGTTG             >  SRR4302540.3683337/1‑94 (MQ=60)

                                                                                   GAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGG            >  SRR4302540.3923857/1‑94 (MQ=60)

                                                                                   GAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGG            <  SRR4302540.6711835/94‑1 (MQ=60)

                                                                                   GAAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGG            <  SRR4302540.1012516/94‑1 (MQ=60)

                                                                                   GAAATTTCAGGAGGGTGAGGAAGCAATAGTTATCAGAACTAGGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGG            <  SRR4302540.4228711/94‑1 (MQ=60)

                                                                                    AAATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGG           <  SRR4302540.5325139/94‑1 (MQ=60)

                                                                                     AATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGC          <  SRR4302540.8359391/94‑1 (MQ=60)

                                                                                     AATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGC          <  SRR4302540.2334067/94‑1 (MQ=60)

                                                                                      ATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCG         <  SRR4302540.4766573/94‑1 (MQ=60)

                                                                                      ATTTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCG         >  SRR4302540.8254656/1‑94 (MQ=60)

                                                                                        TTCAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGAT       <  SRR4302540.6190839/94‑1 (MQ=60)

                                                                                          CAGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTA     >  SRR4302540.256235/1‑94 (MQ=60)

                                                                                           AGGAGGGTGGGGAATCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTAT    <  SRR4302540.8300962/94‑1 (MQ=60)

                                                                                           AGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTAT    >  SRR4302540.7603102/1‑94 (MQ=60)

                                                                                           AGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTAT    <  SRR4302540.2745706/94‑1 (MQ=60)

                                                                                           AGGAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTAT    <  SRR4302540.1014985/94‑1 (MQ=60)

                                                                                             GAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTATGC  <  SRR4302540.5485702/94‑1 (MQ=60)

                                                                                             GAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTATGC  >  SRR4302540.1155656/1‑94 (MQ=60)

GTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGCAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTATGC  >  NC_000913/4161609‑4161795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`