Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,175,949	+G	intergenic (+82/‑76)	nusG → / → rplK	NusG/50S ribosomal subunit protein L11

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,175,947	1	.	G	99.6%	1581.9 / ‑2.6	487	intergenic (+80/‑78)	nusG/rplK	NusG/50S ribosomal subunit protein L11
Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (220/264); total (222/265)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 543 total aligned reads displayed.

TGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA  >  NC_000913/4175855‑4176034

tGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑t                                                                                          >  2:1357318/1‑93 (MQ=255)

 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑g                                                                                        <  1:8272254/93‑1 (MQ=255)

 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑g                                                                                        >  2:1226108/1‑93 (MQ=255)

 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑g                                                                                        <  2:9292442/93‑1 (MQ=255)

 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑g                                                                                        <  1:2232807/93‑1 (MQ=255)

  aaaaaGCCTAACCCAGCGATGAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑gg                                                                                       >  2:9686344/1‑93 (MQ=255)

  aaaaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑gg                                                                                       <  2:9475767/93‑1 (MQ=255)

     aaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑gggcc                                                                                    <  2:3388010/93‑4 (MQ=255)

     aaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑gggcc                                                                                    <  1:318563/93‑4 (MQ=255)

      aGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑gggcct                                                                                   >  1:6598213/1‑89 (MQ=255)

      aGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑gggcct                                                                                   <  2:7488377/93‑5 (MQ=255)

      aGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑gggcct                                                                                   <  1:1183508/93‑5 (MQ=255)

          tAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGcc                                                                                <  1:5238355/93‑1 (MQ=255)

          tAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGcc                                                                                <  2:3124501/93‑1 (MQ=255)

               cAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTaa                                                                           >  2:6344339/1‑93 (MQ=255)

               cAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTaa                                                                           >  1:2355614/1‑93 (MQ=255)

                aGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTaaa                                                                          >  2:1784679/1‑93 (MQ=255)

                aGCGATCAAAAAAGCGGCGATTTAATAGTTGCACAAGGCGGCAGATTGGAATACAATTTCGCGCCTTTTGTTTTTACG‑GGCCTTGCCCGGaaa                                                                          >  2:4425755/1‑93 (MQ=255)

                  cGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAAc                                                                        >  1:6317646/1‑93 (MQ=255)

                  cGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAAc                                                                        <  1:3736718/93‑1 (MQ=255)

                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGa                                                                      >  2:1516228/1‑93 (MQ=255)

                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGa                                                                      >  1:2322582/1‑93 (MQ=255)

                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGa                                                                      >  2:3800369/1‑93 (MQ=255)

                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGa                                                                      >  1:9176505/1‑93 (MQ=255)

                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGCGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTTCCCGTAAAACgt                                                                      >  2:8359796/1‑92 (MQ=255)

                     tCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTAGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGAt                                                                     <  1:9679199/93‑1 (MQ=255)

                      cAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGAtt                                                                    <  1:2495697/93‑1 (MQ=255)

                         aaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGAttttt                                                                 >  1:7747656/1‑93 (MQ=255)

                         aaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGAttttt                                                                 >  1:6923528/1‑93 (MQ=255)

                          aaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGAtttttt                                                                >  1:5490284/1‑93 (MQ=255)

                           aaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTta                                                               >  1:1092402/1‑93 (MQ=255)

                           aaGCGGCGATTTAATCGTTGCACAAGGCATGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTta                                                               >  2:10031712/1‑93 (MQ=255)

                            aGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTtat                                                              <  1:987150/93‑1 (MQ=255)

                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTtata                                                             <  2:6024641/93‑1 (MQ=255)

                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTtata                                                             <  2:3222115/93‑1 (MQ=255)

                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTtata                                                             <  2:3683350/93‑1 (MQ=255)

                              cggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTatat                                                            <  2:4828148/93‑1 (MQ=255)

                              cggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTatat                                                            >  1:3093546/1‑93 (MQ=255)

                               ggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATc                                                           <  2:8924791/93‑1 (MQ=255)

                                gcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCa                                                          >  2:1911666/1‑93 (MQ=255)

                                gcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCa                                                          >  2:5870942/1‑93 (MQ=255)

                                gcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCa                                                          <  1:1002093/93‑1 (MQ=255)

                                 cgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCAc                                                         <  1:4435729/93‑1 (MQ=255)

                                 cgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCAc                                                         <  1:4951875/93‑1 (MQ=255)

                                  gATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACg                                                        >  1:8705814/1‑93 (MQ=255)

                                  gATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACg                                                        <  1:7046741/93‑1 (MQ=255)

                                   aTTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACgg                                                       >  2:2320661/1‑93 (MQ=255)

                                   aTTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACgg                                                       <  2:5720648/93‑1 (MQ=255)

                                      tAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGa                                                    <  1:4241220/93‑1 (MQ=255)

                                      tAATCGTTGCACAAGACGTGAGAAAGGAATACATTTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGa                                                    <  1:8955676/93‑1 (MQ=255)

                                       aaTCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAg                                                   <  1:8073953/93‑1 (MQ=255)

                                        aTCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGc                                                  >  2:5654978/1‑93 (MQ=255)

                                         tCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGcc                                                 >  2:2689190/1‑93 (MQ=255)

                                          cGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCct                                                >  1:3785220/1‑93 (MQ=255)

                                            ttGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctct                                              >  1:5986103/1‑93 (MQ=255)

                                              gCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCa                                            >  1:6371943/1‑93 (MQ=255)

                                                acaAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          <  2:8177200/93‑1 (MQ=255)

                                                 caAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCagag                                         <  2:4129130/93‑1 (MQ=255)

                                                 caAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCagag                                         >  2:6595014/1‑93 (MQ=255)

                                                 caAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCagag                                         >  2:9739439/1‑93 (MQ=255)

                                                  aaGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAgg                                        <  2:7705882/93‑1 (MQ=255)

                                                   aGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGc                                       <  1:1831135/93‑1 (MQ=255)

                                                   aGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGc                                       <  1:890977/93‑1 (MQ=255)

                                                   aGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGc                                       >  2:683107/1‑93 (MQ=255)

                                                     gCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGt                                     <  1:737292/93‑1 (MQ=255)

                                                     gCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGt                                     <  1:2954403/93‑1 (MQ=255)

                                                       gTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtta                                   <  2:8704284/93‑1 (MQ=255)

                                                       gTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtta                                   <  1:6477655/93‑1 (MQ=255)

                                                       gTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtta                                   <  2:2813478/93‑1 (MQ=255)

                                                       gTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATAACGGGGAGCCTCTCAGAGGCGtta                                   <  2:7941126/93‑1 (MQ=255)

                                                        tGAGATTGGAATCCAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttat                                  <  2:8822208/93‑1 (MQ=255)

                                                         gagaTTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttatt                                 <  1:2639041/93‑1 (MQ=255)

                                                         gagaTTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttatt                                 <  2:4093493/93‑1 (MQ=255)

                                                         gagaTTGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttatt                                 >  2:2976172/1‑93 (MQ=255)

                                                              tGGAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCa                            >  2:713473/1‑93 (MQ=255)

                                                                gAATACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          >  1:134980/1‑93 (MQ=255)

                                                                 aaTACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACt                         <  1:3387558/93‑1 (MQ=255)

                                                                   tACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  1:3539629/1‑93 (MQ=255)

                                                                   tACAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  2:208293/1‑93 (MQ=255)

                                                                     cAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAg                     <  1:7194976/93‑1 (MQ=255)

                                                                     cAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAg                     >  1:2713096/1‑93 (MQ=255)

                                                                     cAATTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAg                     <  1:6128690/93‑1 (MQ=255)

                                                                      aaTTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAgg                    >  2:5378839/1‑93 (MQ=255)

                                                                       aTTTCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGa                   <  1:7789527/93‑1 (MQ=255)

                                                                        tttCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGaa                  >  2:6251804/1‑93 (MQ=255)

                                                                        tttCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGaa                  <  2:3470853/93‑1 (MQ=255)

                                                                         ttCGCGAGTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAt                 <  1:1725386/93‑1 (MQ=255)

                                                                          tCGCGCCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAtt                <  1:755441/93‑1 (MQ=255)

                                                                              gcCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            <  1:4743505/93‑1 (MQ=255)

                                                                              gcCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            <  1:8552815/93‑1 (MQ=255)

                                                                              gcCTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            >  2:6773072/1‑93 (MQ=255)

                                                                               ccTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATaa           <  1:3969165/93‑1 (MQ=255)

                                                                                cTTTTGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtatact          >  2:2200768/1‑91 (MQ=255)

                                                                                 ttttGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATg         >  1:9491641/1‑93 (MQ=255)

                                                                                 ttttGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATg         >  1:9383480/1‑93 (MQ=255)

                                                                                 ttttGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATg         <  2:8569671/93‑1 (MQ=255)

                                                                                 ttttGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATg         >  2:2430618/1‑93 (MQ=255)

                                                                                   ttGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGc       <  2:7277003/93‑1 (MQ=255)

                                                                                   ttGTTTTTA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGc       <  2:5195443/93‑1 (MQ=255)

                                                                                      tttttA‑TGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTaa    <  1:9267536/93‑1 (MQ=255)

TGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTA‑T‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA  >  NC_000913/4175855‑4176034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 306 total aligned reads displayed.

GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175856‑4176042

GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GG                                                                                               <  SRR4302540.9763702/94‑1 (MQ=60)

GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GG                                                                                               >  SRR4302540.5952774/1‑94 (MQ=60)

GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GG                                                                                               <  SRR4302540.7991994/94‑1 (MQ=60)

GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GG                                                                                               <  SRR4302540.2256837/94‑1 (MQ=60)

 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GGG                                                                                              >  SRR4302540.7269562/1‑94 (MQ=60)

 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GGG                                                                                              >  SRR4302540.9357635/1‑94 (MQ=60)

  AAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GGGC                                                                                             >  SRR4302540.3838492/1‑94 (MQ=60)

    AAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCT                                                                                            >  SRR4302540.6671276/1‑94 (MQ=60)

    AAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCT                                                                                            >  SRR4302540.6671278/1‑94 (MQ=60)

    AAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCT                                                                                            <  SRR4302540.321745/94‑1 (MQ=60)

     AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTT                                                                                           <  SRR4302540.1195728/94‑1 (MQ=60)

     AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATCGGCCTT                                                                                           >  SRR4302540.5006406/1‑94 (MQ=60)

      GCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTG                                                                                          <  SRR4302540.1182812/94‑1 (MQ=60)

      GCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTG                                                                                          <  SRR4302540.1120015/94‑1 (MQ=60)

       CCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGC                                                                                         >  SRR4302540.2358269/1‑94 (MQ=60)

        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302540.6064061/1‑94 (MQ=60)

        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302540.6833507/1‑94 (MQ=60)

        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302540.783856/1‑94 (MQ=60)

        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302540.9309601/1‑94 (MQ=60)

        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302540.4149205/1‑94 (MQ=60)

         TAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCC                                                                                       <  SRR4302540.5295501/94‑1 (MQ=60)

         TAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCA                                                                                       <  SRR4302540.5755156/94‑1 (MQ=60)

          AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTGGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCG                                                                                      <  SRR4302540.1950420/94‑1 (MQ=60)

           ACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGT                                                                                     <  SRR4302540.6361537/94‑1 (MQ=60)

              CAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAA                                                                                  >  SRR4302540.1297451/1‑94 (MQ=60)

               AGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAA                                                                                 >  SRR4302540.2376440/1‑94 (MQ=60)

                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302540.7868811/94‑1 (MQ=60)

                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAC                                                                                >  SRR4302540.3383914/1‑94 (MQ=60)

                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302540.9498009/94‑1 (MQ=60)

                GCGATCAAAAAAGCGGCAATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302540.9090639/94‑1 (MQ=60)

                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACG                                                                               <  SRR4302540.4529663/94‑1 (MQ=60)

                  GATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGA                                                                              >  SRR4302540.4959293/1‑94 (MQ=60)

                  GATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGA                                                                              >  SRR4302540.2347590/1‑94 (MQ=60)

                  GATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGA                                                                              >  SRR4302540.9286570/1‑94 (MQ=60)

                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           <  SRR4302540.2522592/94‑1 (MQ=60)

                     CAAAAAAGCGGCGATTTAATAGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           >  SRR4302540.9858712/1‑94 (MQ=60)

                      AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTT                                                                          >  SRR4302540.20668/1‑94 (MQ=60)

                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        >  SRR4302540.5550728/1‑94 (MQ=60)

                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        >  SRR4302540.4355839/1‑94 (MQ=60)

                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        >  SRR4302540.9449096/1‑94 (MQ=60)

                         AAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTA                                                                       >  SRR4302540.1103618/1‑94 (MQ=60)

                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302540.9938135/94‑1 (MQ=60)

                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302540.8908085/94‑1 (MQ=60)

                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302540.3828213/94‑1 (MQ=60)

                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302540.2531839/94‑1 (MQ=60)

                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302540.2346244/94‑1 (MQ=60)

                           AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     >  SRR4302540.2673175/1‑94 (MQ=60)

                            caGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    >  SRR4302540.3140226/3‑94 (MQ=60)

                            GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    >  SRR4302540.8329134/1‑94 (MQ=60)

                            GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    >  SRR4302540.3127466/1‑94 (MQ=60)

                            GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    <  SRR4302540.6580318/94‑1 (MQ=60)

                            GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    <  SRR4302540.3700221/94‑1 (MQ=60)

                             CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   >  SRR4302540.88380/1‑94 (MQ=60)

                             CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   >  SRR4302540.8345494/1‑94 (MQ=60)

                             CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   <  SRR4302540.3783408/94‑1 (MQ=60)

                              GGCGATTTAATCGTTGCACAAGGCGTGAGCTTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  <  SRR4302540.7598055/94‑1 (MQ=60)

                              GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  <  SRR4302540.7598051/94‑1 (MQ=60)

                              GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  <  SRR4302540.1756860/94‑1 (MQ=60)

                              GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAAATCA                                                                  <  SRR4302540.1927507/94‑1 (MQ=60)

                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302540.4481429/94‑1 (MQ=60)

                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302540.6425807/94‑1 (MQ=60)

                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 >  SRR4302540.5173299/1‑94 (MQ=60)

                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 >  SRR4302540.9553597/1‑94 (MQ=60)

                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302540.1012273/94‑1 (MQ=60)

                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                <  SRR4302540.4483793/94‑1 (MQ=60)

                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                >  SRR4302540.9906549/1‑94 (MQ=60)

                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                <  SRR4302540.5005374/94‑1 (MQ=60)

                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               <  SRR4302540.7125102/94‑1 (MQ=60)

                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302540.7408763/1‑94 (MQ=60)

                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302540.955216/1‑94 (MQ=60)

                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               <  SRR4302540.8417661/94‑1 (MQ=60)

                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302540.7294823/1‑94 (MQ=60)

                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302540.3210726/1‑94 (MQ=60)

                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302540.6444089/94‑1 (MQ=60)

                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302540.3052517/94‑1 (MQ=60)

                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302540.4123682/94‑1 (MQ=60)

                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302540.6444090/94‑1 (MQ=60)

                                   TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             <  SRR4302540.8539733/94‑1 (MQ=60)

                                   TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             <  SRR4302540.5395127/94‑1 (MQ=60)

                                   TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             >  SRR4302540.6070324/1‑94 (MQ=60)

                                    TTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGA                                                            <  SRR4302540.8287664/94‑1 (MQ=60)

                                    TTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGA                                                            <  SRR4302540.112456/94‑1 (MQ=60)

                                     TAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           <  SRR4302540.6611973/94‑1 (MQ=60)

                                     TAATCGTTGCACAAGACGTGAGAAAGGAATACATTTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           <  SRR4302540.9061426/94‑1 (MQ=60)

                                      AATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGC                                                          <  SRR4302540.8167642/94‑1 (MQ=60)

                                      AATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTCTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGC                                                          >  SRR4302540.8751348/1‑94 (MQ=60)

                                       ATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCC                                                         <  SRR4302540.9035069/94‑1 (MQ=60)

                                       ATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCC                                                         <  SRR4302540.9035068/94‑1 (MQ=60)

                                       ATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGACTTGCCCGTAAAACGATTTTTTATATCACGGGGAGGC                                                         >  SRR4302540.2269967/1‑94 (MQ=60)

                                        TCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCT                                                        >  SRR4302540.3560843/1‑94 (MQ=60)

                                         CGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       >  SRR4302540.4331223/1‑94 (MQ=60)

                                          GTTGCACACGGCGTGTGATTGGAATGCAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAACCGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302540.7784171/94‑1 (MQ=60)

                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302540.6080666/94‑1 (MQ=60)

                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302540.1086811/94‑1 (MQ=60)

                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      >  SRR4302540.9418711/1‑94 (MQ=60)

                                           TTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTC                                                     <  SRR4302540.1839213/94‑1 (MQ=60)

                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    >  SRR4302540.8574733/1‑94 (MQ=60)

                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    >  SRR4302540.6442891/1‑94 (MQ=60)

                                             tcncaaaGCGTGAGATTGAAANNCAATTTCGCGACTTTTGTTTTTATGGGCCCTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAG                                                   <  SRR4302540.1814509/87‑1 (MQ=60)

                                             TCNCAAGGCNTGAGATTGGAANNCANTTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAG                                                   <  SRR4302540.1814510/94‑1 (MQ=60)

                                               ACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302540.7784649/94‑1 (MQ=60)

                                               ACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302540.7908740/94‑1 (MQ=60)

                                                CAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                <  SRR4302540.6312261/94‑1 (MQ=60)

                                                CAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                >  SRR4302540.3939506/1‑94 (MQ=60)

                                                  AGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCG                                              <  SRR4302540.10002463/94‑1 (MQ=60)

                                                  AGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCG                                              <  SRR4302540.8670748/94‑1 (MQ=60)

                                                  AGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCG                                              <  SRR4302540.900446/94‑1 (MQ=60)

                                                    GCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302540.745167/94‑1 (MQ=60)

                                                    GCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302540.2986941/94‑1 (MQ=60)

                                                     CGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTA                                           >  SRR4302540.4923270/1‑94 (MQ=60)

                                                      GTGAGATTGTAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          <  SRR4302540.6963909/94‑1 (MQ=60)

                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGTAGCCTCTCAGAGGCGTTAT                                          >  SRR4302540.7092057/1‑94 (MQ=60)

                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          >  SRR4302540.7054388/1‑94 (MQ=60)

                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          <  SRR4302540.6549721/94‑1 (MQ=60)

                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          >  SRR4302540.6401947/1‑94 (MQ=60)

                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          <  SRR4302540.2673136/94‑1 (MQ=60)

                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302540.7125502/94‑1 (MQ=60)

                                                        GAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTA                                        <  SRR4302540.10003590/94‑1 (MQ=60)

                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302540.1361518/1‑94 (MQ=60)

                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302540.4554142/1‑94 (MQ=60)

                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       <  SRR4302540.2851327/94‑1 (MQ=60)

                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302540.5104953/1‑94 (MQ=60)

                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302540.5592759/1‑94 (MQ=60)

                                                            TTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    >  SRR4302540.3570466/1‑94 (MQ=60)

                                                             TGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   >  SRR4302540.8762169/1‑94 (MQ=60)

                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  >  SRR4302540.136395/1‑94 (MQ=60)

                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  >  SRR4302540.247767/1‑94 (MQ=60)

                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  >  SRR4302540.2637439/1‑94 (MQ=60)

                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  <  SRR4302540.9155065/94‑1 (MQ=60)

                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  >  SRR4302540.2738866/1‑94 (MQ=60)

                                                               GAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACTATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 >  SRR4302540.7370163/1‑94 (MQ=60)

                                                               GAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACTATTTTTTATATCACGCGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 >  SRR4302540.7370162/1‑94 (MQ=60)

                                                                AATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                <  SRR4302540.3424521/94‑1 (MQ=60)

                                                                 ATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302540.9147973/1‑94 (MQ=60)

                                                                 ATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302540.4441935/1‑94 (MQ=60)

                                                                 ATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               <  SRR4302540.2419727/94‑1 (MQ=60)

                                                                 ATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302540.2840701/1‑94 (MQ=60)

                                                                 ATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               <  SRR4302540.155443/94‑1 (MQ=60)

                                                                   ACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302540.9765138/94‑1 (MQ=60)

                                                                   ACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302540.9708862/94‑1 (MQ=60)

                                                                   ACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             >  SRR4302540.2742352/1‑94 (MQ=60)

                                                                    CAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGG                            <  SRR4302540.7275175/94‑1 (MQ=60)

                                                                    CAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGG                            <  SRR4302540.6196952/94‑1 (MQ=60)

                                                                     AATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGA                           <  SRR4302540.381523/94‑1 (MQ=60)

                                                                     AATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGA                           >  SRR4302540.1122871/1‑94 (MQ=60)

                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCTTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCTTTATTACCCAACTTGAGGAA                          <  SRR4302540.6271401/94‑1 (MQ=60)

                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          >  SRR4302540.6508381/1‑94 (MQ=60)

                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          >  SRR4302540.3699979/1‑94 (MQ=60)

                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          >  SRR4302540.4214017/1‑94 (MQ=60)

                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          <  SRR4302540.7880580/94‑1 (MQ=60)

                                                                       TTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         <  SRR4302540.450913/94‑1 (MQ=60)

                                                                       TTTCGCGCCTGTTGTTTTTATGGGCCTTGCCCGTAATACGATTTTTTATATCACGGTGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         <  SRR4302540.2289013/94‑1 (MQ=60)

                                                                        TTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATT                        >  SRR4302540.8002834/1‑94 (MQ=60)

                                                                        TTCGCGAGTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATT                        <  SRR4302540.1744009/94‑1 (MQ=60)

                                                                         TCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302540.6368524/94‑1 (MQ=60)

                                                                         TCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302540.1837256/94‑1 (MQ=60)

                                                                         TCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302540.763496/94‑1 (MQ=60)

                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      <  SRR4302540.9706527/94‑1 (MQ=60)

                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      <  SRR4302540.1062970/94‑1 (MQ=60)

                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      <  SRR4302540.785392/94‑1 (MQ=60)

                                                                           GCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTAT                     >  SRR4302540.3898445/1‑94 (MQ=60)

                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302540.7006709/94‑1 (MQ=60)

                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   >  SRR4302540.3397949/1‑94 (MQ=60)

                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302540.4794127/94‑1 (MQ=60)

                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302540.8652161/94‑1 (MQ=60)

                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   >  SRR4302540.8319640/1‑94 (MQ=60)

                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCATAGGCGCTATTACCCAACTTGAGGAATTTATAAT                  >  SRR4302540.8973847/1‑94 (MQ=60)

                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  <  SRR4302540.937428/94‑1 (MQ=60)

                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  <  SRR4302540.4011955/94‑1 (MQ=60)

                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  <  SRR4302540.4275168/94‑1 (MQ=60)

                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  >  SRR4302540.141373/1‑94 (MQ=60)

                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  <  SRR4302540.7263930/94‑1 (MQ=60)

                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  <  SRR4302540.5419829/94‑1 (MQ=60)

                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  <  SRR4302540.3647402/94‑1 (MQ=60)

                                                                               CTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302540.9604150/1‑94 (MQ=60)

                                                                                TTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                <  SRR4302540.3817454/94‑1 (MQ=60)

                                                                                TTTTGTTTTGATGGGCCTTGCCCGTACAACGATGTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACACAACTTGAGGAATTTATAATGG                <  SRR4302540.10084992/94‑1 (MQ=60)

                                                                                 TTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGC               >  SRR4302540.7706571/1‑94 (MQ=60)

                                                                                  TTGTTTTTATGGGCCTTGCCCGTAAGATGATTATTAATATCATGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCT              <  SRR4302540.3480334/94‑1 (MQ=60)

                                                                                  TTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCT              >  SRR4302540.3118755/1‑94 (MQ=60)

                                                                                  TTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCT              >  SRR4302540.3152185/1‑94 (MQ=60)

                                                                                    GTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAA            <  SRR4302540.9484852/94‑1 (MQ=60)

                                                                                       TTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAA         <  SRR4302540.2640222/94‑1 (MQ=60)

                                                                                       TTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAA         <  SRR4302540.3741373/94‑1 (MQ=60)

                                                                                        TTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAA        >  SRR4302540.3000991/1‑94 (MQ=60)

                                                                                         TATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTGCCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302540.935675/94‑1 (MQ=60)

                                                                                         TATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302540.7994767/94‑1 (MQ=60)

                                                                                          atgGGCCTTGCCCGTAAAACGATTTTTCATATCACGCGGAGTCACTCCGAGGCGTTATTACCTAACTTGAGGAATTTATAATGGCTAACAACGT      >  SRR4302540.5339080/4‑94 (MQ=60)

                                                                                           tgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTA     <  SRR4302540.6892121/92‑1 (MQ=60)

                                                                                           G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTCTTACCCAACTTGAGGAATTTATCATGGCTAAGAAAGTAC    >  SRR4302540.1236432/1‑94 (MQ=60)

                                                                                           G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    >  SRR4302540.1236431/1‑94 (MQ=60)

                                                                                           G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302540.5267157/94‑1 (MQ=60)

                                                                                           G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302540.6011244/94‑1 (MQ=60)

                                                                                           G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302540.6011245/94‑1 (MQ=60)

                                                                                             GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACA   <  SRR4302540.4036968/94‑1 (MQ=60)

                                                                                             GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACA   >  SRR4302540.6074703/1‑94 (MQ=60)

                                                                                              GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  SRR4302540.6967756/1‑94 (MQ=60)

                                                                                              GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  <  SRR4302540.6384207/94‑1 (MQ=60)

                                                                                              GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  <  SRR4302540.2371248/94‑1 (MQ=60)

                                                                                              GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  SRR4302540.9395617/1‑94 (MQ=60)

GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175856‑4176042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`