Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,178,668 A→G intergenic (+165/‑155) rplL → / → rpoB 50S ribosomal subunit protein L7/L12/RNA polymerase beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,178,6680AG99.8% 1988.6 / NA 618intergenic (+165/‑155)rplL/rpoB50S ribosomal subunit protein L7/L12/RNA polymerase beta subunit
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (345/270);  total (346/272)
Fisher's exact test for biased strand distribution p-value = 4.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 636 total aligned reads displayed.

TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT  >  NC_000913/4178578‑4178757
                                                                                          |                                                                                         
tGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCg                                                                                         <  1:3861698/93‑1 (MQ=255)
tGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCg                                                                                         <  1:2715699/93‑1 (MQ=255)
       cgcCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTc                                                                                  <  1:10024274/93‑1 (MQ=255)
       cgcCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTc                                                                                  <  2:6204135/93‑1 (MQ=255)
        gcCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCt                                                                                 >  1:8711488/1‑93 (MQ=255)
         ccAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCtg                                                                                <  2:4051437/93‑1 (MQ=255)
            gTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTgtgt                                                                             >  2:130953/1‑93 (MQ=255)
            gTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTgtgt                                                                             >  1:8551347/1‑93 (MQ=255)
             tAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTa                                                                            >  1:584780/1‑93 (MQ=255)
             tAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTa                                                                            <  2:9290493/93‑1 (MQ=255)
              aGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTaa                                                                           <  1:2436763/93‑1 (MQ=255)
               gCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTaaa                                                                          <  1:5752041/93‑1 (MQ=255)
                 gTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATc                                                                        <  1:5040108/93‑1 (MQ=255)
                 gTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATc                                                                        >  2:1933604/1‑93 (MQ=255)
                 gTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATc                                                                        <  2:662325/93‑1 (MQ=255)
                  tttCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCg                                                                       >  2:4508950/1‑93 (MQ=255)
                  tttCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGCCCGTTCTGTGTAAATCg                                                                       >  2:8555915/1‑93 (MQ=255)
                    tCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCa                                                                     >  2:9154202/1‑93 (MQ=255)
                    tCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCa                                                                     >  1:1694330/1‑93 (MQ=255)
                     cacaCTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCaa                                                                    <  2:3353257/93‑1 (MQ=255)
                     cacaCTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCaa                                                                    >  2:7868062/1‑93 (MQ=255)
                      acacTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAt                                                                   >  1:1558115/1‑93 (MQ=255)
                       cacTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATg                                                                  >  1:3468793/1‑93 (MQ=255)
                         cTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaa                                                                >  2:8021438/1‑93 (MQ=255)
                         cTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaa                                                                >  1:7026557/1‑93 (MQ=255)
                          tGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaaa                                                               <  1:4871201/93‑1 (MQ=255)
                          tGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaaa                                                               >  2:2373825/1‑93 (MQ=255)
                            tttGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATg                                                             <  2:8840532/93‑1 (MQ=255)
                                actactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGttt                                                         <  2:1202088/93‑1 (MQ=255)
                                 ctactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACATGGCGTCCGTTCTGTTTAAATCGCAATGAAATGGTTTa                                                        >  1:7677597/1‑93 (MQ=255)
                                 ctactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTa                                                        >  1:9313775/1‑93 (MQ=255)
                                 ctactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTa                                                        <  1:3019898/93‑1 (MQ=255)
                                 ctactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTa                                                        <  2:2108998/93‑1 (MQ=255)
                                   actGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAg                                                      >  1:604920/1‑93 (MQ=255)
                                   actGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAg                                                      >  2:2795744/1‑93 (MQ=255)
                                   actGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAg                                                      >  2:8220864/1‑93 (MQ=255)
                                    ctgctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGc                                                     <  2:3897176/93‑1 (MQ=255)
                                    ctgctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGc                                                     >  2:1050122/1‑93 (MQ=255)
                                     tgctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCg                                                    >  1:456704/1‑93 (MQ=255)
                                     tgctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCg                                                    >  2:5891487/1‑93 (MQ=255)
                                      gctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGt                                                   >  1:4015806/1‑93 (MQ=255)
                                       ctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTg                                                  >  2:3760512/1‑93 (MQ=255)
                                        tgtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGa                                                 >  1:6390875/1‑93 (MQ=255)
                                         gtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAt                                                <  2:3000881/93‑1 (MQ=255)
                                         gtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAt                                                >  1:3633226/1‑93 (MQ=255)
                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               >  1:884906/1‑93 (MQ=255)
                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               >  1:6206016/1‑93 (MQ=255)
                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:479534/93‑1 (MQ=255)
                                            ccTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGc                                             <  1:6929407/93‑1 (MQ=255)
                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  2:2561941/1‑93 (MQ=255)
                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  2:5135446/1‑93 (MQ=255)
                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  1:1115625/1‑93 (MQ=255)
                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  2:7444246/1‑93 (MQ=255)
                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  1:3269657/1‑93 (MQ=255)
                                               ttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAc                                          >  2:9614389/1‑93 (MQ=255)
                                               ttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAc                                          >  2:4928329/1‑93 (MQ=255)
                                               ttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAc                                          <  1:2023372/93‑1 (MQ=255)
                                                tCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACa                                         <  1:9911678/93‑1 (MQ=255)
                                                tCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACa                                         <  1:1381574/93‑1 (MQ=255)
                                                tCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACa                                         >  2:949148/1‑93 (MQ=255)
                                                tCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACa                                         <  2:8616403/93‑1 (MQ=255)
                                                  aaTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAgg                                       >  1:9523216/1‑93 (MQ=255)
                                                  aaTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGAAAATCGCAATGAAATGGTTTAAGCGAGATAGAACCAga                                       >  1:8285448/1‑92 (MQ=255)
                                                   aTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGc                                      >  1:4186144/1‑93 (MQ=255)
                                                    tGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCa                                     <  1:133121/93‑1 (MQ=255)
                                                     gtttGTTTCTATCGTCGACTTATTATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAAAGGTTTAAGCGTGATAGCAACAGGCAt                                    >  2:7717118/3‑93 (MQ=255)
                                                     gCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAt                                    <  1:7514727/93‑1 (MQ=255)
                                                     gCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAt                                    >  1:7890406/1‑93 (MQ=255)
                                                     gCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAt                                    >  2:5291026/1‑93 (MQ=255)
                                                     gCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAt                                    >  1:7277881/1‑93 (MQ=255)
                                                        tGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGc                                 >  1:5220705/1‑93 (MQ=255)
                                                         gTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCg                                >  1:8124229/1‑93 (MQ=255)
                                                           ttCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGa                              <  2:6422329/93‑1 (MQ=255)
                                                           ttCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAGAGCAACAGGCATTGAGGa                              >  1:1873292/1‑93 (MQ=255)
                                                              tATCGTCGACTTAATATACTGCGACAGGGTGTTCGTTCTGTGTAAATCGCATTGAAATGGTTTAAGCGTGATAGCTACAGGCATTGCGGAAAg                           >  1:8991054/1‑93 (MQ=255)
                                                              tATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAg                           >  2:7321584/1‑93 (MQ=255)
                                                              tATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAg                           >  2:10026250/1‑93 (MQ=255)
                                                                tCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAgtg                         <  1:8483570/93‑1 (MQ=255)
                                                                 cgacgaCTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAgtgt                        <  2:3543566/93‑1 (MQ=255)
                                                                  gacgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGtt                       <  2:4192527/93‑1 (MQ=255)
                                                                   acgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTc                      >  2:1616483/1‑93 (MQ=255)
                                                                     gacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCa                    >  1:9088828/1‑93 (MQ=255)
                                                                      acTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAt                   >  2:9775563/1‑93 (MQ=255)
                                                                      acTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAt                   >  2:6829495/1‑93 (MQ=255)
                                                                       cTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAtt                  >  2:5459959/1‑93 (MQ=255)
                                                                       cTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAtt                  <  1:2277568/93‑1 (MQ=255)
                                                                          aaTATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTc               >  1:5644717/1‑93 (MQ=255)
                                                                           atatACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTcc              <  2:1869373/93‑1 (MQ=255)
                                                                            tataCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGCAAGTGTTCCATTTTCCg             >  1:2184178/1‑93 (MQ=255)
                                                                             ataCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTTATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTcccg            >  2:3694226/1‑91 (MQ=255)
                                                                              taCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGt           <  2:7153659/93‑1 (MQ=255)
                                                                              taCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGt           <  2:5691327/93‑1 (MQ=255)
                                                                              taCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGt           <  2:318823/93‑1 (MQ=255)
                                                                              taCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGt           >  1:9771861/1‑93 (MQ=255)
                                                                              taCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGt           >  1:1449822/1‑93 (MQ=255)
                                                                               aCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTc          <  2:6147031/93‑1 (MQ=255)
                                                                                 tGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTcaa        >  2:8300377/1‑93 (MQ=255)
                                                                                     aCAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACaaa    >  1:6704402/1‑93 (MQ=255)
                                                                                       aGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAt  <  1:2628600/93‑1 (MQ=255)
                                                                                       aGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAt  >  1:1181933/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT  >  NC_000913/4178578‑4178757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 354 total aligned reads displayed.
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  >  NC_000913/4178575‑4178761
                                                                                             |                                                                                             
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGG                                                                                               <  SRR4302540.1011352/94‑1 (MQ=60)
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGG                                                                                               >  SRR4302540.7016660/1‑94 (MQ=60)
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGG                                                                                               >  SRR4302540.5453923/1‑94 (MQ=60)
 GCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGC                                                                                              >  SRR4302540.6220951/1‑94 (MQ=60)
 GCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGC                                                                                              >  SRR4302540.7861358/1‑94 (MQ=60)
 GCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGC                                                                                              <  SRR4302540.4045264/94‑1 (MQ=60)
  CTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCG                                                                                             >  SRR4302540.8884149/1‑94 (MQ=60)
  CTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTCAATATACTGCGACAGGGCG                                                                                             <  SRR4302540.2673098/94‑1 (MQ=60)
   TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGT                                                                                            <  SRR4302540.3903673/94‑1 (MQ=60)
   TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGT                                                                                            <  SRR4302540.2744985/94‑1 (MQ=60)
    GTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTC                                                                                           >  SRR4302540.3375074/1‑94 (MQ=60)
     TAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCC                                                                                          <  SRR4302540.4777228/94‑1 (MQ=60)
      AAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCG                                                                                         <  SRR4302540.3116356/94‑1 (MQ=60)
       AGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGT                                                                                        <  SRR4302540.5793769/94‑1 (MQ=60)
          CGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCT                                                                                     <  SRR4302540.2064815/94‑1 (MQ=60)
          CGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCT                                                                                     >  SRR4302540.8812620/1‑94 (MQ=60)
          CGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCT                                                                                     <  SRR4302540.10140919/94‑1 (MQ=60)
           GCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTG                                                                                    <  SRR4302540.6245761/94‑1 (MQ=60)
             CAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTG                                                                                  >  SRR4302540.7257700/1‑94 (MQ=60)
             CAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTG                                                                                  >  SRR4302540.8708479/1‑94 (MQ=60)
             CAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTG                                                                                  >  SRR4302540.1647144/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGCCAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302540.1459282/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302540.8650678/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302540.4924353/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302540.4339917/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302540.1683376/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302540.157749/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302540.6800268/1‑94 (MQ=60)
               GTAGCGTTTCACTCTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTA                                                                                >  SRR4302540.725235/1‑94 (MQ=60)
               GTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTA                                                                                >  SRR4302540.6026644/1‑94 (MQ=60)
               GTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTA                                                                                >  SRR4302540.591095/1‑94 (MQ=60)
               GTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTA                                                                                >  SRR4302540.1376772/1‑94 (MQ=60)
                TAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAA                                                                               >  SRR4302540.7024659/1‑94 (MQ=60)
                TAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAA                                                                               >  SRR4302540.1190928/1‑94 (MQ=60)
                TAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAA                                                                               >  SRR4302540.7918543/1‑94 (MQ=60)
                TAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAA                                                                               >  SRR4302540.732675/1‑94 (MQ=60)
                TAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAA                                                                               >  SRR4302540.2697941/1‑94 (MQ=60)
                  GCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAAT                                                                             >  SRR4302540.6547939/1‑94 (MQ=60)
                  GCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAAT                                                                             <  SRR4302540.5815529/94‑1 (MQ=60)
                   CGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATC                                                                            <  SRR4302540.1500879/94‑1 (MQ=60)
                    GTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGCCAGGCCGTCCGTTCTGTGTAAATCG                                                                           >  SRR4302540.3305531/1‑94 (MQ=60)
                    GTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCG                                                                           >  SRR4302540.5929367/1‑94 (MQ=60)
                    GTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCG                                                                           >  SRR4302540.2471087/1‑94 (MQ=60)
                     TTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGC                                                                          >  SRR4302540.1450872/1‑94 (MQ=60)
                     TTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGC                                                                          <  SRR4302540.1268807/94‑1 (MQ=60)
                      TTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCA                                                                         >  SRR4302540.1712698/1‑94 (MQ=60)
                      TTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCA                                                                         >  SRR4302540.4199470/1‑94 (MQ=60)
                       TCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAA                                                                        >  SRR4302540.1370685/1‑94 (MQ=60)
                       TCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAA                                                                        >  SRR4302540.2277901/1‑94 (MQ=60)
                        CACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAT                                                                       <  SRR4302540.10015548/94‑1 (MQ=60)
                          CACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGA                                                                     >  SRR4302540.7558737/1‑94 (MQ=60)
                           ACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAA                                                                    >  SRR4302540.2490230/1‑94 (MQ=60)
                           ACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAA                                                                    >  SRR4302540.2364876/1‑94 (MQ=60)
                           ACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAA                                                                    <  SRR4302540.3277968/94‑1 (MQ=60)
                           ACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAA                                                                    >  SRR4302540.7104613/1‑94 (MQ=60)
                            CTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAA                                                                   >  SRR4302540.3449504/1‑94 (MQ=60)
                            CTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAA                                                                   >  SRR4302540.2694043/1‑94 (MQ=60)
                            CTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAA                                                                   <  SRR4302540.8050642/94‑1 (MQ=60)
                             TGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAAT                                                                  <  SRR4302540.8253934/94‑1 (MQ=60)
                             TGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAAT                                                                  >  SRR4302540.584903/1‑94 (MQ=60)
                             TGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAAT                                                                  <  SRR4302540.2386967/94‑1 (MQ=60)
                              GTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATG                                                                 >  SRR4302540.9673774/1‑94 (MQ=60)
                               TTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGG                                                                >  SRR4302540.6520500/1‑94 (MQ=60)
                               TTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGG                                                                >  SRR4302540.10043344/1‑94 (MQ=60)
                                TTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGT                                                               <  SRR4302540.4868897/94‑1 (MQ=60)
                                 TGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTT                                                              <  SRR4302540.2878838/94‑1 (MQ=60)
                                 TGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGATCTGTGTAAATCGCAATGAAATGGTT                                                              >  SRR4302540.8145418/1‑94 (MQ=60)
                                  GACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTT                                                             <  SRR4302540.3699827/94‑1 (MQ=60)
                                   ACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTA                                                            <  SRR4302540.7821523/94‑1 (MQ=60)
                                    CTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAA                                                           >  SRR4302540.7443671/1‑94 (MQ=60)
                                    CTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAA                                                           <  SRR4302540.6282891/94‑1 (MQ=60)
                                    CTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAA                                                           <  SRR4302540.3053090/94‑1 (MQ=60)
                                    CTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAA                                                           <  SRR4302540.954445/94‑1 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          <  SRR4302540.4877262/94‑1 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          <  SRR4302540.8587854/94‑1 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          <  SRR4302540.2344088/94‑1 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          >  SRR4302540.229955/1‑94 (MQ=60)
                                      ACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGC                                                         <  SRR4302540.8903913/94‑1 (MQ=60)
                                       CTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCG                                                        >  SRR4302540.8307434/1‑94 (MQ=60)
                                       CTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCG                                                        <  SRR4302540.1136754/94‑1 (MQ=60)
                                        TGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGCGTAAATCGCAATGAAATGGTTTCAGCGT                                                       >  SRR4302540.4066266/1‑94 (MQ=60)
                                        TGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATAATGCGACAGTGCGTCCGGTCTGCGTACATCGCAATGAAATGGCTTAAGCGT                                                       >  SRR4302540.4066265/1‑94 (MQ=60)
                                         GCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTG                                                      >  SRR4302540.2725947/1‑94 (MQ=60)
                                         GCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTG                                                      <  SRR4302540.9361794/94‑1 (MQ=60)
                                          CTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGA                                                     >  SRR4302540.1792594/1‑94 (MQ=60)
                                           TGTGCCTTTCAATGCTTGTTTCTATCGACGACTTCATATACTGCGATAGGGCGTCCGTTCTGTGTAAATTGCAATGAAATACTTTAAGCGTGAT                                                    >  SRR4302540.5723996/1‑94 (MQ=60)
                                           TGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAT                                                    <  SRR4302540.2792532/94‑1 (MQ=60)
                                           TGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAT                                                    >  SRR4302540.3672998/1‑94 (MQ=60)
                                            GTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATA                                                   >  SRR4302540.894293/1‑94 (MQ=60)
                                            GTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATA                                                   <  SRR4302540.8527911/94‑1 (MQ=60)
                                            GTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATA                                                   <  SRR4302540.10157031/94‑1 (MQ=60)
                                            GTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATA                                                   >  SRR4302540.6275093/1‑94 (MQ=60)
                                            GTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATA                                                   >  SRR4302540.3355209/1‑94 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302540.484674/94‑1 (MQ=60)
                                              GCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGC                                                 <  SRR4302540.3541325/94‑1 (MQ=60)
                                               CCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCA                                                >  SRR4302540.9124483/1‑94 (MQ=60)
                                               CCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCA                                                <  SRR4302540.7006520/94‑1 (MQ=60)
                                               CCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCA                                                >  SRR4302540.8201933/1‑94 (MQ=60)
                                                CTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAA                                               >  SRR4302540.8838948/1‑94 (MQ=60)
                                                CTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAA                                               >  SRR4302540.1900770/1‑94 (MQ=60)
                                                CTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAA                                               >  SRR4302540.3798458/1‑94 (MQ=60)
                                                CTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAA                                               >  SRR4302540.1127181/1‑94 (MQ=60)
                                                 TTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAC                                              >  SRR4302540.9335963/1‑94 (MQ=60)
                                                 TTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAA                                              >  SRR4302540.2194451/1‑94 (MQ=60)
                                                  TTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACA                                             <  SRR4302540.2045238/94‑1 (MQ=60)
                                                  TTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACA                                             <  SRR4302540.6465705/94‑1 (MQ=60)
                                                  TTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACA                                             >  SRR4302540.7745368/1‑94 (MQ=60)
                                                  TTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACA                                             >  SRR4302540.263682/1‑94 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGCCAGGGCGTCCGTTCTGTGTAAATCGCAGTGAAATGGTTTACGGATGATAGAAACAG                                            >  SRR4302540.2655644/1‑94 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTATATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302540.1869210/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302540.4969869/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302540.1396318/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302540.1456650/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302540.5643760/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302540.7733560/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302540.155014/94‑1 (MQ=60)
                                                    TAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGG                                           <  SRR4302540.1554003/94‑1 (MQ=60)
                                                    CAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGG                                           >  SRR4302540.5770976/1‑94 (MQ=60)
                                                    CAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGG                                           >  SRR4302540.1227074/1‑94 (MQ=60)
                                                    CAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGG                                           >  SRR4302540.9635981/1‑94 (MQ=60)
                                                     AATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGACATGGTTTAAGCGTGATAGCAACAGGC                                          >  SRR4302540.2991084/1‑94 (MQ=60)
                                                     AATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGC                                          >  SRR4302540.4231644/1‑94 (MQ=60)
                                                      ATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCA                                         >  SRR4302540.6411531/1‑94 (MQ=60)
                                                      ATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCA                                         >  SRR4302540.9973654/1‑94 (MQ=60)
                                                       TGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAT                                        >  SRR4302540.7982499/1‑94 (MQ=60)
                                                       TGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAT                                        <  SRR4302540.10025801/94‑1 (MQ=60)
                                                       TGCTTGGTGCTATAGACGATGTAATATGCTGCGACAGGGCGTCCGTTCTGTGTAAATGGCAATGAAATGGTTGAAGCGTGATAGCAACAGGCAT                                        <  SRR4302540.1148099/94‑1 (MQ=60)
                                                        GCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATT                                       <  SRR4302540.8604247/94‑1 (MQ=60)
                                                        GCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATT                                       <  SRR4302540.7598744/94‑1 (MQ=60)
                                                         CTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTG                                      <  SRR4302540.521238/94‑1 (MQ=60)
                                                         CTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTG                                      >  SRR4302540.8701151/1‑94 (MQ=60)
                                                         CTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTG                                      <  SRR4302540.9286279/94‑1 (MQ=60)
                                                          TTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGATTAAGCGTGATAGCAACAGGCATTGC                                     >  SRR4302540.1338856/1‑94 (MQ=60)
                                                           TGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCG                                    >  SRR4302540.90352/1‑94 (MQ=60)
                                                           TGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCG                                    <  SRR4302540.5319933/94‑1 (MQ=60)
                                                           TGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCG                                    >  SRR4302540.5750150/1‑94 (MQ=60)
                                                           TGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCG                                    <  SRR4302540.464328/94‑1 (MQ=60)
                                                           TGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCG                                    >  SRR4302540.6046411/1‑94 (MQ=60)
                                                            GTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGG                                   <  SRR4302540.6795133/94‑1 (MQ=60)
                                                            GTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGG                                   >  SRR4302540.7475725/1‑94 (MQ=60)
                                                            GTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGG                                   >  SRR4302540.3236583/1‑94 (MQ=60)
                                                             TTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAGAGCAACAGGCATTGAGGA                                  >  SRR4302540.1893813/1‑94 (MQ=60)
                                                              TTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAA                                 <  SRR4302540.2075816/94‑1 (MQ=60)
                                                              TTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAGGAAATGGTTTAAGAGTGATAGCAACAGGCATTGCGGAA                                 <  SRR4302540.4263842/94‑1 (MQ=60)
                                                                CTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAG                               <  SRR4302540.1469893/94‑1 (MQ=60)
                                                                CTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAG                               >  SRR4302540.4016976/1‑94 (MQ=60)
                                                                 TATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGT                              <  SRR4302540.1969098/94‑1 (MQ=60)
                                                                 TATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGT                              <  SRR4302540.5233618/94‑1 (MQ=60)
                                                                  ATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTG                             <  SRR4302540.736266/94‑1 (MQ=60)
                                                                      ACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCC                         <  SRR4302540.681414/94‑1 (MQ=60)
                                                                      ACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCC                         >  SRR4302540.2665514/1‑94 (MQ=60)
                                                                       CGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCA                        <  SRR4302540.9159592/94‑1 (MQ=60)
                                                                       CGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCA                        >  SRR4302540.9198015/1‑94 (MQ=60)
                                                                        GACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAT                       >  SRR4302540.2265029/1‑94 (MQ=60)
                                                                        GACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAT                       >  SRR4302540.5873968/1‑94 (MQ=60)
                                                                         ACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATT                      <  SRR4302540.9739292/94‑1 (MQ=60)
                                                                         ACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATT                      <  SRR4302540.8624069/94‑1 (MQ=60)
                                                                         ACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATT                      <  SRR4302540.4618992/94‑1 (MQ=60)
                                                                          CTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTT                     <  SRR4302540.9569551/94‑1 (MQ=60)
                                                                          CTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTT                     <  SRR4302540.6407966/94‑1 (MQ=60)
                                                                          CTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTT                     <  SRR4302540.3534680/94‑1 (MQ=60)
                                                                           TTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTT                    <  SRR4302540.7648312/94‑1 (MQ=60)
                                                                            TAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTC                   >  SRR4302540.2461199/1‑94 (MQ=60)
                                                                             AATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCC                  <  SRR4302540.5136707/94‑1 (MQ=60)
                                                                              ATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGCAAGTGTTCCATTTTCCG                 >  SRR4302540.2207754/1‑94 (MQ=60)
                                                                              ATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCG                 >  SRR4302540.3616566/1‑94 (MQ=60)
                                                                              ATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCG                 <  SRR4302540.4688435/94‑1 (MQ=60)
                                                                               TATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGATAGTGTTCCATTTTCCGG                >  SRR4302540.9088846/1‑94 (MQ=60)
                                                                               TATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGG                <  SRR4302540.4481320/94‑1 (MQ=60)
                                                                               TATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGG                >  SRR4302540.10087773/1‑94 (MQ=60)
                                                                               TATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGG                <  SRR4302540.9107510/94‑1 (MQ=60)
                                                                               TATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGG                >  SRR4302540.1297115/1‑94 (MQ=60)
                                                                                ATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGT               >  SRR4302540.8406387/1‑94 (MQ=60)
                                                                                ATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGT               <  SRR4302540.6459307/94‑1 (MQ=60)
                                                                                ATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGT               >  SRR4302540.8404084/1‑94 (MQ=60)
                                                                                ATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGT               >  SRR4302540.9886423/1‑94 (MQ=60)
                                                                                ATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGT               >  SRR4302540.1346821/1‑94 (MQ=60)
                                                                                 TACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTC              >  SRR4302540.8763919/1‑94 (MQ=60)
                                                                                 TACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTC              >  SRR4302540.8546504/1‑94 (MQ=60)
                                                                                  ACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCA             <  SRR4302540.5072106/94‑1 (MQ=60)
                                                                                   CTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAA            >  SRR4302540.9482846/1‑94 (MQ=60)
                                                                                   CTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAA            <  SRR4302540.1021065/94‑1 (MQ=60)
                                                                                    TGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAAC           >  SRR4302540.5604826/1‑94 (MQ=60)
                                                                                     GCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACA          >  SRR4302540.3953784/1‑94 (MQ=60)
                                                                                      CGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAA         >  SRR4302540.833826/1‑94 (MQ=60)
                                                                                       GACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATATCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAA        >  SRR4302540.9069668/1‑94 (MQ=60)
                                                                                       GACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAA        >  SRR4302540.7083539/1‑94 (MQ=60)
                                                                                       GACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAA        >  SRR4302540.1964500/1‑94 (MQ=60)
                                                                                       GACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAA        >  SRR4302540.6778397/1‑94 (MQ=60)
                                                                                       GACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAA        <  SRR4302540.9693409/94‑1 (MQ=60)
                                                                                       GACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAA        <  SRR4302540.396853/94‑1 (MQ=60)
                                                                                        ACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAA       <  SRR4302540.6151585/94‑1 (MQ=60)
                                                                                        ACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAA       <  SRR4302540.6151586/94‑1 (MQ=60)
                                                                                         CAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT      <  SRR4302540.4872033/94‑1 (MQ=60)
                                                                                         CAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT      >  SRR4302540.7887361/1‑94 (MQ=60)
                                                                                          AGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATA     >  SRR4302540.149101/1‑94 (MQ=60)
                                                                                          AGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATA     <  SRR4302540.5034661/94‑1 (MQ=60)
                                                                                           GGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAG    <  SRR4302540.4099270/94‑1 (MQ=60)
                                                                                             GCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  >  SRR4302540.5105393/1‑94 (MQ=60)
                                                                                             GCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  >  SRR4302540.6944767/1‑94 (MQ=60)
                                                                                             |                                                                                             
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  >  NC_000913/4178575‑4178761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑