Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,185,057	C→T	D710D (GAC→GAT)	rpoC →	RNA polymerase beta prime subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,185,057	0	C	T	100.0%	1569.8 / NA	426	D710D (GAC→GAT)	rpoC	RNA polymerase beta prime subunit
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (185/241); total (185/241)

Only 100 of 435 total aligned reads displayed.

CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT  >  NC_000913/4184967‑4185146

caaAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATgg                                                                                         <  1:7567398/93‑1 (MQ=255)

 aaaGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGt                                                                                        <  1:6847209/93‑1 (MQ=255)

 aaaGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGt                                                                                        >  2:9198133/1‑93 (MQ=255)

    gTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAg                                                                                     <  2:8274409/93‑1 (MQ=255)

    gTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAg                                                                                     >  2:8671616/1‑93 (MQ=255)

    gTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAg                                                                                     <  1:3929168/93‑1 (MQ=255)

    gTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAg                                                                                     <  1:3004821/93‑1 (MQ=255)

      tATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGa                                                                                   >  2:2924537/1‑93 (MQ=255)

       aTCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACTGTGATTAACCGTGATGGTCAGGaa                                                                                  <  1:35961/93‑1 (MQ=255)

        tctatatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAag                                                                                 <  1:6475591/90‑1 (MQ=255)

          gATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAagag                                                                               <  1:6664823/93‑1 (MQ=255)

           atatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAgaga                                                                              <  1:8191300/93‑1 (MQ=255)

           atatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAgaga                                                                              <  1:6330920/93‑1 (MQ=255)

           atatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAgaga                                                                              <  1:9689206/93‑1 (MQ=255)

           atatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAgaga                                                                              <  2:9562627/93‑1 (MQ=255)

            tatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGaa                                                                             >  2:1144506/1‑93 (MQ=255)

            tatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGCGCTGGTCAGGAAGAGaa                                                                             >  2:9437692/1‑93 (MQ=255)

              tCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGc                                                                           >  2:704064/1‑93 (MQ=255)

              tCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGc                                                                           <  1:7206036/93‑1 (MQ=255)

              tCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGc                                                                           <  2:8224302/93‑1 (MQ=255)

              tCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGc                                                                           <  1:197552/93‑1 (MQ=255)

               cTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGcg                                                                          <  1:8381184/93‑2 (MQ=255)

                 gggCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCggg                                                                        <  2:3536097/93‑1 (MQ=255)

                  ggCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGt                                                                       >  2:4073741/1‑93 (MQ=255)

                  ggCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGt                                                                       <  1:1385128/93‑1 (MQ=255)

                    cTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGttt                                                                     <  2:9314869/93‑1 (MQ=255)

                     tGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTc                                                                    <  1:3377735/93‑1 (MQ=255)

                     tGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTc                                                                    >  1:640845/1‑93 (MQ=255)

                      gcggcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTcc                                                                   <  1:9131261/93‑1 (MQ=255)

                      gcggcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTcc                                                                   >  2:1805276/1‑93 (MQ=255)

                         gcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTc                                                                >  2:563026/1‑93 (MQ=255)

                         gcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTc                                                                <  2:5973071/93‑1 (MQ=255)

                          cgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCa                                                               >  1:4522896/1‑93 (MQ=255)

                           gAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCaa                                                              >  2:8839495/1‑93 (MQ=255)

                           gAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCaa                                                              >  1:8589259/1‑93 (MQ=255)

                           gAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCaa                                                              >  2:2768941/1‑93 (MQ=255)

                            aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc                                                             <  2:4702547/93‑1 (MQ=255)

                            aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc                                                             >  2:6759658/1‑93 (MQ=255)

                            aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc                                                             >  1:10020099/1‑93 (MQ=255)

                            aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc                                                             <  1:2256892/93‑1 (MQ=255)

                             aCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACa                                                            <  2:5680877/93‑1 (MQ=255)

                               gATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGc                                                          <  2:7589529/93‑1 (MQ=255)

                               gATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGc                                                          <  2:1954967/93‑1 (MQ=255)

                               gATCGAGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGc                                                          <  2:7431513/93‑1 (MQ=255)

                                aTCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCa                                                         >  1:949032/1‑93 (MQ=255)

                                 tCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCAt                                                        <  2:4848863/93‑1 (MQ=255)

                                  cGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATc                                                       <  1:3165337/93‑1 (MQ=255)

                                    tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                     <  2:8412495/93‑1 (MQ=255)

                                    tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                     <  2:20824/93‑1 (MQ=255)

                                    tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                     >  1:4323236/1‑93 (MQ=255)

                                    tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGCGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                     >  2:3179034/1‑93 (MQ=255)

                                    ggtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                     <  2:7658409/92‑1 (MQ=255)

                                     gtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAc                                                    >  1:4417213/1‑93 (MQ=255)

                                     gtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAc                                                    <  1:7362877/93‑1 (MQ=255)

                                     gtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAc                                                    <  1:110180/93‑1 (MQ=255)

                                      tATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACa                                                   >  1:6149803/1‑93 (MQ=255)

                                        tCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatg                                                 >  2:692837/1‑93 (MQ=255)

                                        tCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatg                                                 >  1:98846/1‑93 (MQ=255)

                                        tCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatg                                                 >  2:9830400/1‑93 (MQ=255)

                                        tCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatg                                                 >  2:8016174/1‑93 (MQ=255)

                                         ccAAGGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                <  2:2418867/93‑1 (MQ=255)

                                         ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                <  2:7295192/93‑1 (MQ=255)

                                         ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                <  2:6262453/93‑1 (MQ=255)

                                         ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                <  2:1570181/93‑1 (MQ=255)

                                         ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                <  1:6933961/93‑1 (MQ=255)

                                            aaGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGATAAGCGGGGTTCCTTCAACAGCATTTACatgatgt                                             >  2:7964556/1‑92 (MQ=255)

                                            aaGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATgg                                             <  2:3924012/93‑1 (MQ=255)

                                                gatgatGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGa                                         <  1:2510931/93‑1 (MQ=255)

                                                 atgatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGAc                                        <  1:5633579/93‑1 (MQ=255)

                                                  tgatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACt                                       >  1:7930915/1‑93 (MQ=255)

                                                     tgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCg                                    <  2:6492529/93‑1 (MQ=255)

                                                      ggATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCgg                                   <  1:212611/93‑1 (MQ=255)

                                                      ggATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCgg                                   >  2:3717526/1‑93 (MQ=255)

                                                         tAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTgc                                <  2:5217382/93‑1 (MQ=255)

                                                            ccTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGGCGACTCCGGTGcgcg                             >  2:1722964/1‑93 (MQ=255)

                                                               gCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTgg                          >  2:4962627/1‑93 (MQ=255)

                                                               gCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTgg                          <  1:4871749/93‑1 (MQ=255)

                                                                 aaaCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGtt                        <  2:4515080/93‑1 (MQ=255)

                                                                 aaaCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGtt                        >  2:2661129/1‑93 (MQ=255)

                                                                   aCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATTTACATGATGGCCGACTTCGGTGCGCGTGGTTCt                      >  1:8983686/1‑93 (MQ=255)

                                                                   aCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCt                      <  2:1421989/93‑1 (MQ=255)

                                                                    cTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTg                     <  2:4305606/93‑1 (MQ=255)

                                                                    cTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTg                     <  1:14453/93‑1 (MQ=255)

                                                                        aaCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGc                 >  1:2881411/1‑93 (MQ=255)

                                                                        aaCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGc                 >  1:5961175/1‑93 (MQ=255)

                                                                         aCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGca                <  1:1028881/93‑1 (MQ=255)

                                                                         aCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGca                <  1:4028057/93‑1 (MQ=255)

                                                                          ccGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGcac               <  1:3224981/93‑1 (MQ=255)

                                                                           cGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGcaca              >  1:3750784/1‑93 (MQ=255)

                                                                              gATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAt           <  1:9379704/93‑1 (MQ=255)

                                                                                 tAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCg        >  2:5395555/1‑93 (MQ=255)

                                                                                 tAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCg        <  2:2212093/93‑1 (MQ=255)

                                                                                 tAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCg        <  1:8839065/93‑1 (MQ=255)

                                                                                 tAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCg        >  1:4983742/1‑93 (MQ=255)

                                                                                   aCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTc      <  2:8387540/93‑1 (MQ=255)

                                                                                   aCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTc      <  1:1740529/93‑1 (MQ=255)

                                                                                    ccGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCa     <  1:7680276/93‑1 (MQ=255)

                                                                                    ccGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCa     <  1:5314857/93‑1 (MQ=255)

                                                                                      gTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGc   >  2:10040622/1‑93 (MQ=255)

                                                                                       tGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCt  <  1:2728306/93‑1 (MQ=255)

CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT  >  NC_000913/4184967‑4185146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 230 total aligned reads displayed.

CAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT  >  NC_000913/4184964‑4185150

CAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGAT                                                                                               <  SRR4302540.5531930/94‑1 (MQ=60)

CAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGAT                                                                                               <  SRR4302540.8654794/94‑1 (MQ=60)

 AACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATG                                                                                              <  SRR4302540.9010623/94‑1 (MQ=60)

 AACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATG                                                                                              >  SRR4302540.595945/1‑94 (MQ=60)

 AACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATG                                                                                              >  SRR4302540.3254831/1‑94 (MQ=60)

 AACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATG                                                                                              >  SRR4302540.8338235/1‑94 (MQ=60)

  ACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGG                                                                                             >  SRR4302540.5860008/1‑94 (MQ=60)

   CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGT                                                                                            >  SRR4302540.8948387/1‑94 (MQ=60)

   CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGT                                                                                            <  SRR4302540.7652289/94‑1 (MQ=60)

   CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGT                                                                                            <  SRR4302540.3391749/94‑1 (MQ=60)

   CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGT                                                                                            <  SRR4302540.3499913/94‑1 (MQ=60)

    AAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTC                                                                                           <  SRR4302540.6923065/94‑1 (MQ=60)

    AAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATAAACCGTGATGGTC                                                                                           >  SRR4302540.7645624/1‑94 (MQ=60)

     AAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCA                                                                                          >  SRR4302540.4324663/1‑94 (MQ=60)

     AAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCA                                                                                          <  SRR4302540.6755632/94‑1 (MQ=60)

      AGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAG                                                                                         <  SRR4302540.312671/94‑1 (MQ=60)

      AGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAG                                                                                         >  SRR4302540.9828493/1‑94 (MQ=60)

      AGTTATCGATATCCGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAG                                                                                         <  SRR4302540.6931856/94‑1 (MQ=60)

       GTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGG                                                                                        <  SRR4302540.3971664/94‑1 (MQ=60)

       GTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGG                                                                                        <  SRR4302540.3037906/94‑1 (MQ=60)

        TTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGA                                                                                       <  SRR4302540.4501391/94‑1 (MQ=60)

        TTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGA                                                                                       <  SRR4302540.7664673/94‑1 (MQ=60)

         TATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAA                                                                                      <  SRR4302540.2956153/94‑1 (MQ=60)

         TATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAA                                                                                      <  SRR4302540.653202/94‑1 (MQ=60)

         TATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAA                                                                                      >  SRR4302540.7674942/1‑94 (MQ=60)

          ATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACTGTGATTAACCGTGATGGTCAGGAAG                                                                                     <  SRR4302540.36333/94‑1 (MQ=60)

          ATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAG                                                                                     <  SRR4302540.6240551/94‑1 (MQ=60)

           TCTATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGA                                                                                    <  SRR4302540.6547644/94‑1 (MQ=60)

           TCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGA                                                                                    <  SRR4302540.6547645/94‑1 (MQ=60)

            CGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAG                                                                                   <  SRR4302540.620685/94‑1 (MQ=60)

            CGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAG                                                                                   <  SRR4302540.7213088/94‑1 (MQ=60)

             GATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGA                                                                                  >  SRR4302540.6183310/1‑94 (MQ=60)

             GATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGA                                                                                  >  SRR4302540.6427440/1‑94 (MQ=60)

             GATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGA                                                                                  <  SRR4302540.6738492/94‑1 (MQ=60)

              ATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAA                                                                                 <  SRR4302540.6401418/94‑1 (MQ=60)

              ATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAA                                                                                 <  SRR4302540.4371211/94‑1 (MQ=60)

              ATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAA                                                                                 <  SRR4302540.8113061/94‑1 (MQ=60)

              ATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAA                                                                                 <  SRR4302540.8286484/94‑1 (MQ=60)

              ATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAA                                                                                 <  SRR4302540.10068052/94‑1 (MQ=60)

              ATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAA                                                                                 <  SRR4302540.9803177/94‑1 (MQ=60)

               TATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAG                                                                                >  SRR4302540.2641330/1‑94 (MQ=60)

               TATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAG                                                                                >  SRR4302540.3336300/1‑94 (MQ=60)

                ATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGC                                                                               >  SRR4302540.919517/1‑94 (MQ=60)

                ATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGC                                                                               >  SRR4302540.1466753/1‑94 (MQ=60)

                ATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGC                                                                               <  SRR4302540.6470674/94‑1 (MQ=60)

                ATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGC                                                                               <  SRR4302540.2295164/94‑1 (MQ=60)

                 TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                              <  SRR4302540.4543925/94‑1 (MQ=60)

                 TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                              <  SRR4302540.1340800/94‑1 (MQ=60)

                 TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                              <  SRR4302540.199508/94‑1 (MQ=60)

                 TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                              <  SRR4302540.7286370/94‑1 (MQ=60)

                 ACTGGCCTGCGGCGAACGATCGTGTATCCAAAGCCATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                              <  SRR4302540.7286369/94‑1 (MQ=60)

                  CTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGG                                                                             <  SRR4302540.8478434/94‑1 (MQ=60)

                    GGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGT                                                                           <  SRR4302540.6818808/94‑1 (MQ=60)

                     GGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTT                                                                          <  SRR4302540.1416910/94‑1 (MQ=60)

                       CTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTC                                                                        >  SRR4302540.647674/1‑94 (MQ=60)

                       CTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTC                                                                        <  SRR4302540.6259034/94‑1 (MQ=60)

                       CTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTC                                                                        >  SRR4302540.1916415/1‑94 (MQ=60)

                        TGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCC                                                                       <  SRR4302540.3414629/94‑1 (MQ=60)

                         GCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCT                                                                      <  SRR4302540.4453237/94‑1 (MQ=60)

                         GCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCT                                                                      <  SRR4302540.9241008/94‑1 (MQ=60)

                          CGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTT                                                                     <  SRR4302540.2112711/94‑1 (MQ=60)

                           GGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTC                                                                    <  SRR4302540.8198525/94‑1 (MQ=60)

                           GGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTC                                                                    >  SRR4302540.906688/1‑94 (MQ=60)

                            GCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCA                                                                   >  SRR4302540.4571878/1‑94 (MQ=60)

                            GCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCA                                                                   <  SRR4302540.5037119/94‑1 (MQ=60)

                             CGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAA                                                                  >  SRR4302540.4819131/1‑94 (MQ=60)

                             CGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAA                                                                  >  SRR4302540.8689108/1‑94 (MQ=60)

                              GAACGATCGTTAATCCAAAGCTATGATGGATAACCTGCAAACTGAAGCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAC                                                                 <  SRR4302540.7946247/94‑1 (MQ=60)

                              GAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATTGTCAGGAAGAGAAGCGGGTTTCCTTCAAC                                                                 <  SRR4302540.3545336/94‑1 (MQ=60)

                              GAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGNANGAGNAGCGGGTTTNCTTanan                                                                 >  SRR4302540.8440775/1‑90 (MQ=60)

                              GAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAC                                                                 >  SRR4302540.10136717/1‑94 (MQ=60)

                               AACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACA                                                                <  SRR4302540.2447041/94‑1 (MQ=60)

                               AACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACA                                                                >  SRR4302540.8768615/1‑94 (MQ=60)

                               AACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACA                                                                <  SRR4302540.978851/94‑1 (MQ=60)

                               AACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACA                                                                <  SRR4302540.2281114/94‑1 (MQ=60)

                                actaatgtgtatcacaagggattattgatacCCTGCAAACTGAAACCGTGATTAGCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAG                                                               <  SRR4302540.2444902/63‑1 (MQ=60)

                                ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCCACAG                                                               >  SRR4302540.741246/1‑94 (MQ=60)

                                ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCACCAG                                                               >  SRR4302540.741245/1‑94 (MQ=60)

                                ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAG                                                               <  SRR4302540.2444903/94‑1 (MQ=60)

                                 CGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGC                                                              >  SRR4302540.7889533/1‑94 (MQ=60)

                                  GATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCA                                                             >  SRR4302540.958908/1‑94 (MQ=60)

                                  GATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCA                                                             <  SRR4302540.6724426/94‑1 (MQ=60)

                                   ATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCAT                                                            >  SRR4302540.3254795/1‑94 (MQ=60)

                                   ATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTAAGGAAGAGAAGCGGGTTTCCTTCAACAGCAT                                                            >  SRR4302540.8658448/1‑94 (MQ=60)

                                    TCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATC                                                           <  SRR4302540.1039940/94‑1 (MQ=60)

                                      GTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTA                                                         >  SRR4302540.4370304/1‑94 (MQ=60)

                                      GTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTA                                                         >  SRR4302540.4180394/1‑94 (MQ=60)

                                      GTGGATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCCTTCAACCGCATATA                                                         >  SRR4302540.8669664/1‑94 (MQ=60)

                                       TGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAC                                                        <  SRR4302540.4117873/94‑1 (MQ=60)

                                       TGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAC                                                        >  SRR4302540.570540/1‑94 (MQ=60)

                                       TGTATCCAAAGCGATGATGGAAAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGCGAAGCGGGTTTGTGTCAACAGCATCTAC                                                        >  SRR4302540.4499154/1‑94 (MQ=60)

                                        GTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACA                                                       <  SRR4302540.111354/94‑1 (MQ=60)

                                        GTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACA                                                       >  SRR4302540.6951856/1‑94 (MQ=60)

                                        GTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACA                                                       >  SRR4302540.6218298/1‑94 (MQ=60)

                                         TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT                                                      <  SRR4302540.4056582/94‑1 (MQ=60)

                                         TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT                                                      >  SRR4302540.9842956/1‑94 (MQ=60)

                                         TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT                                                      <  SRR4302540.4955695/94‑1 (MQ=60)

                                         TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT                                                      <  SRR4302540.10164073/94‑1 (MQ=60)

                                            CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT                                                   <  SRR4302540.7011128/94‑1 (MQ=60)

                                            CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT                                                   <  SRR4302540.3891131/94‑1 (MQ=60)

                                             CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG                                                  >  SRR4302540.10139637/1‑94 (MQ=60)

                                             CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG                                                  <  SRR4302540.3825780/94‑1 (MQ=60)

                                             CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG                                                  <  SRR4302540.9934974/94‑1 (MQ=60)

                                               AAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGC                                                <  SRR4302540.5354579/94‑1 (MQ=60)

                                               AAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGC                                                <  SRR4302540.9818844/94‑1 (MQ=60)

                                                AGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCC                                               <  SRR4302540.6258632/94‑1 (MQ=60)

                                                  CGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGA                                             >  SRR4302540.3986536/1‑94 (MQ=60)

                                                  CGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGA                                             <  SRR4302540.9520281/94‑1 (MQ=60)

                                                  CGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGA                                             >  SRR4302540.2879983/1‑94 (MQ=60)

                                                   GATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGAC                                            <  SRR4302540.2538052/94‑1 (MQ=60)

                                                    ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                           <  SRR4302540.5448765/94‑1 (MQ=60)

                                                    ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                           >  SRR4302540.3024274/1‑94 (MQ=60)

                                                    ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                           >  SRR4302540.8023357/1‑94 (MQ=60)

                                                    ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                           <  SRR4302540.5695583/94‑1 (MQ=60)

                                                     TGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTC                                          >  SRR4302540.3400390/1‑94 (MQ=60)

                                                        TGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGG                                       >  SRR4302540.9226696/1‑94 (MQ=60)

                                                        TGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGG                                       <  SRR4302540.1680733/94‑1 (MQ=60)

                                                         GGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGT                                      >  SRR4302540.861335/1‑94 (MQ=60)

                                                         GGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGT                                      <  SRR4302540.214692/94‑1 (MQ=60)

                                                          GATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTG                                     <  SRR4302540.3999537/94‑1 (MQ=60)

                                                          GATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTG                                     >  SRR4302540.2228824/1‑94 (MQ=60)

                                                          GATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTG                                     >  SRR4302540.2226712/1‑94 (MQ=60)

                                                            AAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCG                                   <  SRR4302540.7883040/94‑1 (MQ=60)

                                                               CCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGT                                >  SRR4302540.5724906/1‑94 (MQ=60)

                                                               CCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGG                                >  SRR4302540.1964103/1‑94 (MQ=60)

                                                               CCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGACAAGCTGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGT                                <  SRR4302540.3259055/94‑1 (MQ=60)

                                                                CTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTG                               <  SRR4302540.7262693/94‑1 (MQ=60)

                                                                CTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTG                               <  SRR4302540.1207608/94‑1 (MQ=60)

                                                                CTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTG                               >  SRR4302540.1932788/1‑94 (MQ=60)

                                                                 TGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGG                              >  SRR4302540.7494093/1‑94 (MQ=60)

                                                                  GCAAACTGAAACCGTGATTAGCCGTGATGGTCATGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGT                             <  SRR4302540.8366309/94‑1 (MQ=60)

                                                                  GCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGT                             <  SRR4302540.1874977/94‑1 (MQ=60)

                                                                  GCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGT                             <  SRR4302540.6699888/94‑1 (MQ=60)

                                                                  GCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGT                             <  SRR4302540.4924018/94‑1 (MQ=60)

                                                                   CAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTT                            >  SRR4302540.2997693/1‑94 (MQ=60)

                                                                    AAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTC                           >  SRR4302540.6512920/1‑94 (MQ=60)

                                                                    AAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTC                           <  SRR4302540.7691979/94‑1 (MQ=60)

                                                                    AAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTC                           <  SRR4302540.8872284/94‑1 (MQ=60)

                                                                    AAACTGAAACCGTGATCAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTC                           >  SRR4302540.9629713/1‑94 (MQ=60)

                                                                     AACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATTTACATGATGGCCGACTTCGGTGCGCGTGGTTCT                          >  SRR4302540.9090888/1‑94 (MQ=60)

                                                                     AACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCT                          <  SRR4302540.3683294/94‑1 (MQ=60)

                                                                     AACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCT                          <  SRR4302540.4764931/94‑1 (MQ=60)

                                                                      ACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTG                         <  SRR4302540.3817565/94‑1 (MQ=60)

                                                                      ACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTG                         <  SRR4302540.2796961/94‑1 (MQ=60)

                                                                      ACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTG                         <  SRR4302540.4678795/94‑1 (MQ=60)

                                                                       CTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGC                        <  SRR4302540.14616/94‑1 (MQ=60)

                                                                       CTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGC                        <  SRR4302540.7377362/94‑1 (MQ=60)

                                                                        TGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCG                       >  SRR4302540.3151417/1‑94 (MQ=60)

                                                                          AAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGC                     >  SRR4302540.6027118/1‑94 (MQ=60)

                                                                          AAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGC                     >  SRR4302540.2912762/1‑94 (MQ=60)

                                                                          AAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGCTTCTGCCGC                     >  SRR4302540.3688043/1‑94 (MQ=60)

                                                                           ACCCGTGACTAACCGTGATGGCCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGCCTCCGGTGCGCGTGGTTCTGCGGCA                    <  SRR4302540.9270639/94‑1 (MQ=60)

                                                                            ACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCAC                   <  SRR4302540.1039318/94‑1 (MQ=60)

                                                                            ACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCAC                   <  SRR4302540.4071493/94‑1 (MQ=60)

                                                                             CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA                  >  SRR4302540.9312708/1‑94 (MQ=60)

                                                                             CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA                  >  SRR4302540.3791705/1‑94 (MQ=60)

                                                                             CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA                  <  SRR4302540.3260038/94‑1 (MQ=60)

                                                                             CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA                  <  SRR4302540.9588806/94‑1 (MQ=60)

                                                                             CCGGGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGACCGACTCCGGTGCGCGTGGTTCTGCGGCACA                  <  SRR4302540.3260036/94‑1 (MQ=60)

                                                                              CGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAG                 <  SRR4302540.829659/94‑1 (MQ=60)

                                                                               GTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGA                <  SRR4302540.2764056/94‑1 (MQ=60)

                                                                               GTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGA                <  SRR4302540.5632475/94‑1 (MQ=60)

                                                                               GTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGA                >  SRR4302540.130078/1‑94 (MQ=60)

                                                                                TGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAT               >  SRR4302540.6650699/1‑94 (MQ=60)

                                                                                 GATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATT              <  SRR4302540.9491630/94‑1 (MQ=60)

                                                                                 GATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATT              <  SRR4302540.9491356/94‑1 (MQ=60)

                                                                                 GATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATT              <  SRR4302540.9491355/94‑1 (MQ=60)

                                                                                  ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCAGGTGCGCGTGGTTCTGCGGCACAGATTC             >  SRR4302540.5423401/1‑94 (MQ=60)

                                                                                  ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTC             >  SRR4302540.8878572/1‑94 (MQ=60)

                                                                                  ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTC             >  SRR4302540.2746843/1‑94 (MQ=60)

                                                                                  ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTC             >  SRR4302540.2217377/1‑94 (MQ=60)

                                                                                  ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTCACTTACACAGCATCTACATGATGGCCGACTACGGTGgccgcggttatgcgacacaatttg             >  SRR4302540.2746844/1‑70 (MQ=32)

                                                                                   TTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG            >  SRR4302540.8189401/1‑94 (MQ=60)

                                                                                   TTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG            <  SRR4302540.105008/94‑1 (MQ=60)

                                                                                   TTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG            >  SRR4302540.5037697/1‑94 (MQ=60)

                                                                                   TTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG            >  SRR4302540.5037696/1‑94 (MQ=60)

                                                                                   ATAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG            <  SRR4302540.3161732/94‑1 (MQ=60)

                                                                                    TAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT           <  SRR4302540.8941302/94‑1 (MQ=60)

                                                                                      ACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCA         <  SRR4302540.101329/94‑1 (MQ=60)

                                                                                      ACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCA         >  SRR4302540.6964698/1‑94 (MQ=60)

                                                                                      ACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCA         <  SRR4302540.1759356/94‑1 (MQ=60)

                                                                                       CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG        >  SRR4302540.7587112/1‑94 (MQ=60)

                                                                                       CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG        <  SRR4302540.1446866/94‑1 (MQ=60)

                                                                                       CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG        <  SRR4302540.1446867/94‑1 (MQ=60)

                                                                                       CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG        <  SRR4302540.3740486/94‑1 (MQ=60)

                                                                                       CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG        <  SRR4302540.5373054/94‑1 (MQ=60)

                                                                                       CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG        <  SRR4302540.9190525/94‑1 (MQ=60)

                                                                                       CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG        <  SRR4302540.7767203/94‑1 (MQ=60)

                                                                                        CGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGC       <  SRR4302540.5132951/94‑1 (MQ=60)

                                                                                         GTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT      <  SRR4302540.4372787/94‑1 (MQ=60)

                                                                                         GTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT      <  SRR4302540.6403017/94‑1 (MQ=60)

                                                                                         GTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCCTGGTTCTGCGGCACAGATTCGTCAGCT      <  SRR4302540.1229102/94‑1 (MQ=60)

                                                                                          TGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTT     >  SRR4302540.3570089/1‑94 (MQ=60)

                                                                                          TGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTT     <  SRR4302540.2757730/94‑1 (MQ=60)

                                                                                          TGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTT     <  SRR4302540.1416127/94‑1 (MQ=60)

                                                                                           GATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTG    >  SRR4302540.5159762/1‑94 (MQ=60)

                                                                                             TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT  <  SRR4302540.3600463/94‑1 (MQ=60)

                                                                                             TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT  <  SRR4302540.2652119/94‑1 (MQ=60)

                                                                                             TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT  >  SRR4302540.115745/1‑94 (MQ=60)

                                                                                             TGGTCAGGAAGAGAAGCGGGGTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT  <  SRR4302540.509569/94‑1 (MQ=60)

CAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT  >  NC_000913/4184964‑4185150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`