Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,211,571	A→G	R44R (CGT→CGC)	yjaB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,211,571	0	A	G	100.0%	1147.2 / NA	360	R44R (CGT→CGC)	yjaB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (232/128); total (232/128)

Only 100 of 457 total aligned reads displayed.

ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC  >  NC_000913/4211481‑4211660

aTCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcg                                                                                         >  1:1438627/1‑93 (MQ=255)

aTCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcg                                                                                         <  1:2084212/93‑1 (MQ=255)

 tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga                                                                                        >  1:4862768/1‑93 (MQ=255)

 tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga                                                                                        >  2:2328339/1‑93 (MQ=255)

 tCCAAACGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTGCCGGCAGGAAGgagcga                                                                                        >  2:8923420/1‑93 (MQ=255)

  ccATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaa                                                                                       >  2:7924870/1‑93 (MQ=255)

  ccATATGCCTCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaa                                                                                       <  1:5692658/93‑1 (MQ=255)

   cATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaac                                                                                      >  2:9486729/1‑93 (MQ=255)

     tatGCTGCCCACTTAGCAACATTAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa                                                                                    >  2:6405116/1‑93 (MQ=255)

     tatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCTACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa                                                                                    >  2:5097168/1‑93 (MQ=255)

     tatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa                                                                                    >  2:4740883/1‑93 (MQ=255)

     tatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa                                                                                    >  1:6050337/1‑93 (MQ=255)

     tatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa                                                                                    >  2:4210705/1‑93 (MQ=255)

       tgctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAgg                                                                                  >  1:7887178/1‑93 (MQ=255)

        gctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGt                                                                                 >  2:3456339/1‑93 (MQ=255)

          tgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcc                                                                               <  1:6677087/93‑1 (MQ=255)

            cccACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcctc                                                                             <  2:4555922/93‑1 (MQ=255)

              cagttAGCAACATAAATACAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACCAGGtcgtccc                                                                           >  1:3685593/4‑92 (MQ=255)

              cACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCa                                                                           >  2:8615080/1‑93 (MQ=255)

              cACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCa                                                                           >  1:8165909/1‑93 (MQ=255)

               aCTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAg                                                                          >  1:7126868/1‑93 (MQ=255)

                cTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCCGGCGGGAGCGAACTAGGTGCTCCAGc                                                                         >  1:841076/1‑93 (MQ=255)

                cTTAGCAACATAAATCCAACCGGCTGACCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGc                                                                         <  1:1126500/93‑1 (MQ=255)

                   aGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCg                                                                      >  1:1684007/1‑93 (MQ=255)

                    gCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCgg                                                                     >  2:5375063/1‑93 (MQ=255)

                     cAACATAAATCCTACCGGCTGATCCTGCTCATTAACCGCGACCCACAACGGCGCGTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCggc                                                                    >  2:8958852/1‑92 (MQ=255)

                     cAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGt                                                                    <  1:7234389/93‑1 (MQ=255)

                     cAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGt                                                                    <  1:4473542/93‑1 (MQ=255)

                      aaCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTACAGCTCGGTc                                                                   >  2:4338995/1‑93 (MQ=255)

                       aCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTcc                                                                  >  1:8610638/1‑93 (MQ=255)

                         aTAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGa                                                                <  1:9288470/93‑1 (MQ=255)

                         aTAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGa                                                                >  2:6803458/1‑93 (MQ=255)

                          tAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAt                                                               >  1:3381127/1‑93 (MQ=255)

                          tAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAt                                                               >  1:948939/1‑93 (MQ=255)

                          aaaaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAt                                                               <  1:3074454/92‑1 (MQ=255)

                           aaaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATa                                                              <  1:1811770/93‑1 (MQ=255)

                           aaaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATa                                                              <  1:7403801/93‑1 (MQ=255)

                            aaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAc                                                             >  2:185674/1‑93 (MQ=255)

                             aTCCAACCGGCTGATCCCGCTCATTAACCGCAACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGCTAct                                                            >  1:730368/1‑93 (MQ=255)

                               ccAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATActct                                                          >  2:8496247/1‑93 (MQ=255)

                                 aaCCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgc                                                        >  2:1544017/1‑93 (MQ=255)

                                  aCCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgct                                                       >  2:4065995/1‑93 (MQ=255)

                                  aCCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgct                                                       <  2:9880900/93‑1 (MQ=255)

                                   ccGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgctg                                                      >  2:1496898/1‑93 (MQ=255)

                                    cGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGa                                                     <  1:992136/93‑1 (MQ=255)

                                    cGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGa                                                     >  2:3890646/1‑93 (MQ=255)

                                      gCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATa                                                   <  2:57756/93‑1 (MQ=255)

                                      gCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATa                                                   <  1:5129075/93‑1 (MQ=255)

                                       cTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAg                                                  >  2:5510719/1‑93 (MQ=255)

                                        tGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGa                                                 >  2:324828/1‑93 (MQ=255)

                                        tGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGa                                                 >  1:2539167/1‑93 (MQ=255)

                                         gATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaa                                                >  1:4388149/1‑93 (MQ=255)

                                         gATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaa                                                >  1:3267992/1‑93 (MQ=255)

                                           tCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaaaa                                              >  1:4032784/1‑93 (MQ=255)

                                           tCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaaaa                                              >  1:3417884/1‑93 (MQ=255)

                                            cccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAt                                             >  2:828709/1‑93 (MQ=255)

                                             ccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATc                                            <  1:6990921/93‑1 (MQ=255)

                                             ccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATc                                            >  2:8038567/1‑93 (MQ=255)

                                             ccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATc                                            >  2:7246807/1‑93 (MQ=255)

                                              cGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCg                                           >  2:1161443/1‑93 (MQ=255)

                                                cTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTg                                         >  1:6486616/1‑93 (MQ=255)

                                                cTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTg                                         >  2:2959581/1‑93 (MQ=255)

                                                 tCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGa                                        >  1:5295975/1‑93 (MQ=255)

                                                  cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCTATACTCTGCTGATAGAAAATCGTGAg                                       <  2:2780469/93‑1 (MQ=255)

                                                  cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg                                       <  1:7648610/93‑1 (MQ=255)

                                                   aTTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAgg                                      >  2:5267316/1‑92 (MQ=255)

                                                    ttAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTg                                     <  2:1053269/93‑1 (MQ=255)

                                                     tAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTgg                                    <  1:8704906/93‑1 (MQ=255)

                                                        ccGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAt                                 <  2:9616887/93‑1 (MQ=255)

                                                         cgcgACCCCCAACGCCGCTTCCGGCAGGAAGGGGGGAACTAGGTCCCCCAGCCGGGCCCGTAACTCTGCTGATGGAAAACCGTGGGTGGCATc                                >  2:7358913/1‑93 (MQ=255)

                                                         cgcgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGTAAATCGTGAGTGGCATc                                <  1:5705472/93‑1 (MQ=255)

                                                         cgcgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATc                                >  2:2116583/1‑93 (MQ=255)

                                                            gACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGAc                             <  1:2980094/93‑1 (MQ=255)

                                                            gACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGAc                             >  1:7736762/1‑93 (MQ=255)

                                                             aCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACa                            >  2:3575637/1‑93 (MQ=255)

                                                             aCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACa                            >  2:2576194/1‑93 (MQ=255)

                                                             aCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACa                            >  2:8806681/1‑93 (MQ=255)

                                                                 acaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAc                        >  1:4574406/1‑93 (MQ=255)

                                                                  caACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACg                       >  2:7761082/1‑93 (MQ=255)

                                                                   aaCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGCCAGCACGa                      >  1:286719/1‑93 (MQ=255)

                                                                     cGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGaca                    >  1:2487936/1‑93 (MQ=255)

                                                                      ggCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGacac                   >  1:8848482/1‑93 (MQ=255)

                                                                      ggCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGacac                   <  2:9145725/93‑1 (MQ=255)

                                                                       gcgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAcc                  <  1:6783825/93‑1 (MQ=255)

                                                                       gcgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAcc                  >  1:4253981/1‑93 (MQ=255)

                                                                        cgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCa                 <  2:168740/93‑1 (MQ=255)

                                                                         gcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCaa                <  2:5688070/93‑1 (MQ=255)

                                                                          cTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCaaa               >  2:9342385/1‑93 (MQ=255)

                                                                           ttCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAt              >  1:5588481/1‑93 (MQ=255)

                                                                              cGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATTCTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGc           <  2:7036212/93‑1 (MQ=255)

                                                                              cGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGc           >  1:803658/1‑93 (MQ=255)

                                                                              cGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGc           >  2:2070010/1‑93 (MQ=255)

                                                                               ggCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGTCACCAAATCGCa          >  1:5868408/1‑93 (MQ=255)

                                                                               ggCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCa          >  2:5437833/1‑93 (MQ=255)

                                                                                gCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCaa         >  2:5833360/1‑93 (MQ=255)

                                                                                 cAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGCCAGAACGAAACCAAATCGCAAc        >  1:1017687/1‑93 (MQ=255)

                                                                                  aggaaggaGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCacca       >  1:9748026/1‑90 (MQ=255)

                                                                                   ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa      >  1:6335563/1‑93 (MQ=255)

                                                                                   ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa      <  2:8183854/93‑1 (MQ=255)

                                                                                       ggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTtc  <  2:6211379/93‑1 (MQ=255)

ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC  >  NC_000913/4211481‑4211660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 243 total aligned reads displayed.

CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTCC  >  NC_000913/4211478‑4211664

cccaaccatattcttCCCACTTAGCAACATAAATCCAACCGGGTGGTCCCCGTTATTAACCGGGGCCCACAACGGCGCTTCCGGCAGGAAGGAG                                                                                               <  SRR4302540.7229337/79‑1 (MQ=46)

CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAG                                                                                               <  SRR4302540.7229338/94‑1 (MQ=60)

CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAG                                                                                               <  SRR4302540.6198482/94‑1 (MQ=60)

 GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTTATCCCCCTCATTACCCACGAACCACAACGGCGCTTCCGGCAGGACGGAGC                                                                                              >  SRR4302540.1904668/1‑94 (MQ=60)

 GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC                                                                                              <  SRR4302540.824355/94‑1 (MQ=60)

 GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC                                                                                              >  SRR4302540.1904669/1‑94 (MQ=60)

 GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC                                                                                              >  SRR4302540.5358968/1‑94 (MQ=60)

 GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC                                                                                              >  SRR4302540.6606436/1‑94 (MQ=60)

  CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG                                                                                             >  SRR4302540.1454238/1‑94 (MQ=60)

  CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG                                                                                             >  SRR4302540.9188772/1‑94 (MQ=60)

   CTCCATATGCTCCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                            <  SRR4302540.4397829/94‑1 (MQ=60)

   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                            >  SRR4302540.2518511/1‑94 (MQ=60)

   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                            >  SRR4302540.7735239/1‑94 (MQ=60)

   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                            >  SRR4302540.4914917/1‑94 (MQ=60)

   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                            <  SRR4302540.2106599/94‑1 (MQ=60)

   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                            >  SRR4302540.4442719/1‑94 (MQ=60)

   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                            >  SRR4302540.2012206/1‑94 (MQ=60)

   ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGA                                                                                            >  SRR4302540.98737/1‑94 (MQ=60)

    TCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAA                                                                                           >  SRR4302540.3559648/1‑94 (MQ=60)

    TCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAA                                                                                           <  SRR4302540.692940/94‑1 (MQ=60)

     CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC                                                                                          >  SRR4302540.8901776/1‑94 (MQ=60)

     CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC                                                                                          <  SRR4302540.2760320/94‑1 (MQ=60)

     CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC                                                                                          <  SRR4302540.8791610/94‑1 (MQ=60)

     CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC                                                                                          <  SRR4302540.5755603/94‑1 (MQ=60)

     CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGATCATTAACCGCGACCCACAACGGGGCTTCCGGCAGGAAGGAGGGAAC                                                                                          >  SRR4302540.7529538/1‑94 (MQ=60)

     CCATATGCCTCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC                                                                                          <  SRR4302540.5755332/94‑1 (MQ=60)

       ATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTA                                                                                        <  SRR4302540.3019143/94‑1 (MQ=60)

       ATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTA                                                                                        >  SRR4302540.6117580/1‑94 (MQ=60)

        TATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAG                                                                                       <  SRR4302540.9719697/94‑1 (MQ=60)

        TATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAG                                                                                       >  SRR4302540.393548/1‑94 (MQ=60)

         ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG                                                                                      >  SRR4302540.7979246/1‑94 (MQ=60)

           TCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTC                                                                                    <  SRR4302540.5337326/94‑1 (MQ=60)

            CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC                                                                                   <  SRR4302540.1297265/94‑1 (MQ=60)

            CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC                                                                                   >  SRR4302540.6890760/1‑94 (MQ=60)

             TGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCT                                                                                  <  SRR4302540.6750844/94‑1 (MQ=60)

             TGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCT                                                                                  >  SRR4302540.1735561/1‑94 (MQ=60)

              GCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTC                                                                                 <  SRR4302540.1519481/94‑1 (MQ=60)

               CCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCC                                                                                <  SRR4302540.7401059/94‑1 (MQ=60)

                CCAGTTAGCAACATAAATACAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACCAGGTCgtccc                                                                               >  SRR4302540.3725865/1‑89 (MQ=60)

                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                               >  SRR4302540.7567922/1‑94 (MQ=60)

                CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA                                                                               >  SRR4302540.8260735/1‑94 (MQ=60)

                 CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAG                                                                              >  SRR4302540.6582808/1‑94 (MQ=60)

                 CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAG                                                                              <  SRR4302540.9286621/94‑1 (MQ=60)

                 CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAG                                                                              >  SRR4302540.7206242/1‑94 (MQ=60)

                  ACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCCGGCGGGAGCGAACTAGGTGCTCCAGC                                                                             >  SRR4302540.849998/1‑94 (MQ=60)

                  ACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGC                                                                             >  SRR4302540.5792533/1‑94 (MQ=60)

                  ACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGC                                                                             <  SRR4302540.4302010/94‑1 (MQ=60)

                  ACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGC                                                                             >  SRR4302540.6139105/1‑94 (MQ=60)

                  ACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGC                                                                             >  SRR4302540.3639459/1‑94 (MQ=60)

                  ACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGC                                                                             >  SRR4302540.3390001/1‑94 (MQ=60)

                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                            >  SRR4302540.5765906/1‑94 (MQ=60)

                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                            <  SRR4302540.3450382/94‑1 (MQ=60)

                   CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                            >  SRR4302540.8272864/1‑94 (MQ=60)

                   CTTAGCAACATAAATCCAACCGGCTGACCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT                                                                            <  SRR4302540.1138222/94‑1 (MQ=60)

                     TAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCG                                                                          >  SRR4302540.1702281/1‑94 (MQ=60)

                     TAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCG                                                                          <  SRR4302540.5726337/94‑1 (MQ=60)

                       GCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGT                                                                        <  SRR4302540.5151864/94‑1 (MQ=60)

                       GCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGT                                                                        <  SRR4302540.3254749/94‑1 (MQ=60)

                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTC                                                                       <  SRR4302540.4522064/94‑1 (MQ=60)

                        CAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTC                                                                       <  SRR4302540.7315077/94‑1 (MQ=60)

                         AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC                                                                      >  SRR4302540.8710688/1‑94 (MQ=60)

                         AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC                                                                      <  SRR4302540.6030802/94‑1 (MQ=60)

                          ACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCG                                                                     >  SRR4302540.8671364/1‑94 (MQ=60)

                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGCAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGCT                                                                   >  SRR4302540.4498716/1‑94 (MQ=60)

                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGGGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                   >  SRR4302540.2301974/1‑94 (MQ=60)

                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                   <  SRR4302540.9399473/94‑1 (MQ=60)

                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                   >  SRR4302540.3418037/1‑94 (MQ=60)

                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                   >  SRR4302540.9491416/1‑94 (MQ=60)

                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                   >  SRR4302540.958815/1‑94 (MQ=60)

                            ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT                                                                   >  SRR4302540.9079670/1‑94 (MQ=60)

                             AAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATA                                                                  <  SRR4302540.3108179/94‑1 (MQ=60)

                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC                                                                 <  SRR4302540.8673266/94‑1 (MQ=60)

                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC                                                                 <  SRR4302540.4636618/94‑1 (MQ=60)

                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC                                                                 <  SRR4302540.1831541/94‑1 (MQ=60)

                              AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC                                                                 <  SRR4302540.3339368/94‑1 (MQ=60)

                                 TCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCT                                                              <  SRR4302540.7137949/94‑1 (MQ=60)

                                  CCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTG                                                             <  SRR4302540.7990866/94‑1 (MQ=60)

                                   CAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGC                                                            >  SRR4302540.7645028/1‑94 (MQ=60)

                                   CAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGGCCTCCAGCTCGGTCCGTTACTCGGC                                                            >  SRR4302540.7251925/1‑94 (MQ=60)

                                       CGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAT                                                        >  SRR4302540.6512439/1‑94 (MQ=60)

                                       CGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAT                                                        >  SRR4302540.6512438/1‑94 (MQ=60)

                                       CGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAT                                                        <  SRR4302540.1002256/94‑1 (MQ=60)

                                       CGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAT                                                        >  SRR4302540.3983675/1‑94 (MQ=60)

                                         GCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAG                                                      <  SRR4302540.5184630/94‑1 (MQ=60)

                                          CTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGA                                                     >  SRR4302540.2566546/1‑94 (MQ=60)

                                          CTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGA                                                     >  SRR4302540.1871403/1‑94 (MQ=60)

                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                    >  SRR4302540.3028435/1‑94 (MQ=60)

                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                    >  SRR4302540.4435778/1‑94 (MQ=60)

                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                    >  SRR4302540.3303656/1‑94 (MQ=60)

                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                    <  SRR4302540.3010531/94‑1 (MQ=60)

                                           TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA                                                    >  SRR4302540.2948505/1‑94 (MQ=60)

                                            GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA                                                   >  SRR4302540.1035356/1‑94 (MQ=60)

                                            GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA                                                   >  SRR4302540.8734572/1‑94 (MQ=60)

                                            GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA                                                   >  SRR4302540.8734268/1‑94 (MQ=60)

                                             ATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAA                                                  <  SRR4302540.6837816/94‑1 (MQ=60)

                                             ATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAA                                                  >  SRR4302540.3455073/1‑94 (MQ=60)

                                              TCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT                                                 <  SRR4302540.429206/94‑1 (MQ=60)

                                              TCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT                                                 >  SRR4302540.6624307/1‑94 (MQ=60)

                                              TCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT                                                 >  SRR4302540.1061337/1‑94 (MQ=60)

                                               CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC                                                <  SRR4302540.549333/94‑1 (MQ=60)

                                               CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC                                                <  SRR4302540.252504/94‑1 (MQ=60)

                                               CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC                                                >  SRR4302540.1448957/1‑94 (MQ=60)

                                               CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC                                                >  SRR4302540.7299710/1‑94 (MQ=60)

                                                CCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCG                                               >  SRR4302540.2113549/1‑94 (MQ=60)

                                                CCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCG                                               <  SRR4302540.7068523/94‑1 (MQ=60)

                                                  GCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTG                                             >  SRR4302540.5841481/1‑94 (MQ=60)

                                                  GCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTG                                             >  SRR4302540.6558757/1‑94 (MQ=60)

                                                  GCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTG                                             >  SRR4302540.5743576/1‑94 (MQ=60)

                                                   CTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGA                                            >  SRR4302540.7188698/1‑94 (MQ=60)

                                                   CTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGA                                            >  SRR4302540.5353904/1‑94 (MQ=60)

                                                    TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG                                           <  SRR4302540.7593514/94‑1 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          <  SRR4302540.1616945/94‑1 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          <  SRR4302540.6893084/94‑1 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          <  SRR4302540.7329525/94‑1 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          <  SRR4302540.5055385/94‑1 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          <  SRR4302540.4422199/94‑1 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          >  SRR4302540.5991851/1‑94 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          >  SRR4302540.7334647/1‑94 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          <  SRR4302540.7734710/94‑1 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT                                          >  SRR4302540.5991850/1‑94 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGG                                          >  SRR4302540.5344653/1‑94 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGG                                          >  SRR4302540.7900864/1‑94 (MQ=60)

                                                     CATTAACCGCGACCCACAACGGCGCTTCCCGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGGCCGATACTCTGCTGATAGAAgatcacgaga                                          >  SRR4302540.2471666/1‑84 (MQ=60)

                                                      ATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTG                                         >  SRR4302540.7795540/1‑94 (MQ=60)

                                                      ATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTG                                         >  SRR4302540.8305631/1‑94 (MQ=60)

                                                      ATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTG                                         <  SRR4302540.5535015/94‑1 (MQ=60)

                                                       TTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGG                                        >  SRR4302540.7444717/1‑94 (MQ=60)

                                                           CCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATC                                    >  SRR4302540.4573611/1‑94 (MQ=60)

                                                           CCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGT                                                                                     <  SRR4302540.3478985/45‑1 (MQ=60)

                                                            CGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGTAAATCGTGAGTGGCATCG                                   <  SRR4302540.5768288/94‑1 (MQ=60)

                                                              CGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGAC                                 >  SRR4302540.7827087/1‑94 (MQ=60)

                                                               GACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACA                                <  SRR4302540.6706692/94‑1 (MQ=60)

                                                                ACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAG                               >  SRR4302540.7955919/1‑94 (MQ=60)

                                                                 CCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGA                              >  SRR4302540.5568747/1‑94 (MQ=60)

                                                                   CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC                            >  SRR4302540.10100432/1‑94 (MQ=60)

                                                                   CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC                            >  SRR4302540.4623757/1‑94 (MQ=60)

                                                                    ACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG                           >  SRR4302540.2890176/1‑94 (MQ=60)

                                                                    ACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG                           >  SRR4302540.4541996/1‑94 (MQ=60)

                                                                    ACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG                           >  SRR4302540.4185511/1‑94 (MQ=60)

                                                                    ACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACG                           >  SRR4302540.4185510/1‑94 (MQ=60)

                                                                     CAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGA                          >  SRR4302540.7997067/1‑94 (MQ=60)

                                                                     CAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGA                          <  SRR4302540.3447367/94‑1 (MQ=60)

                                                                     CAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGA                          >  SRR4302540.3453076/1‑94 (MQ=60)

                                                                      AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC                         <  SRR4302540.7420995/94‑1 (MQ=60)

                                                                      AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC                         >  SRR4302540.8742593/1‑94 (MQ=60)

                                                                       ACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACA                        >  SRR4302540.2514733/1‑94 (MQ=60)

                                                                        CGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAC                       >  SRR4302540.735159/1‑94 (MQ=60)

                                                                        CGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAC                       >  SRR4302540.8950845/1‑94 (MQ=60)

                                                                        CGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAC                       <  SRR4302540.8208505/94‑1 (MQ=60)

                                                                        CGGCGCGGCCGGCAGGAAGGAGCGAACTAGGGCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAC                       <  SRR4302540.8208504/94‑1 (MQ=60)

                                                                         GGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACC                      >  SRR4302540.2485117/1‑94 (MQ=60)

                                                                         GGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACC                      >  SRR4302540.1162416/1‑94 (MQ=60)

                                                                         GGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACA                      >  SRR4302540.7849062/1‑94 (MQ=60)

                                                                          GCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCA                     <  SRR4302540.6858838/94‑1 (MQ=60)

                                                                          GCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCA                     >  SRR4302540.7269747/1‑94 (MQ=60)

                                                                            GCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAA                   >  SRR4302540.5123418/1‑94 (MQ=60)

                                                                            GCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAA                   >  SRR4302540.1711548/1‑94 (MQ=60)

                                                                             CTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAT                  >  SRR4302540.5649987/1‑94 (MQ=60)

                                                                             CTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAT                  <  SRR4302540.2723552/94‑1 (MQ=60)

                                                                             CTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAC                  >  SRR4302540.10064286/1‑94 (MQ=60)

                                                                              TTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGCCACCAAATC                 >  SRR4302540.1883708/1‑94 (MQ=60)

                                                                              TTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATC                 >  SRR4302540.2921172/1‑94 (MQ=60)

                                                                              TTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATC                 >  SRR4302540.472886/1‑94 (MQ=60)

                                                                              TTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATC                 <  SRR4302540.849824/94‑1 (MQ=60)

                                                                              TTCCGGCAGGAAGGAGCGAACTAGGCCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATC                 <  SRR4302540.3174282/94‑1 (MQ=60)

                                                                               TCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGGATCGACAGAACGACACCAAATCG                >  SRR4302540.4476470/1‑94 (MQ=60)

                                                                               TCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCG                >  SRR4302540.3229649/1‑94 (MQ=60)

                                                                               TCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCG                <  SRR4302540.3307417/94‑1 (MQ=60)

                                                                               TCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCG                <  SRR4302540.4003725/94‑1 (MQ=60)

                                                                                CCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATTGC               <  SRR4302540.4224997/94‑1 (MQ=60)

                                                                                CCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGC               >  SRR4302540.812193/1‑94 (MQ=60)

                                                                                 CGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGTCACCAAATCGCA              >  SRR4302540.5933285/1‑94 (MQ=60)

                                                                                  GGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAA             >  SRR4302540.2946819/1‑94 (MQ=60)

                                                                                   GCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGCCAGAACGAAACCAAATCGCAAC            >  SRR4302540.1027995/1‑94 (MQ=60)

                                                                                   GCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAAC            >  SRR4302540.748163/1‑94 (MQ=60)

                                                                                    CAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAcca           >  SRR4302540.9862423/1‑91 (MQ=60)

                                                                                    CAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACG           >  SRR4302540.9862422/1‑94 (MQ=60)

                                                                                     AGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGA          <  SRR4302540.9606949/94‑1 (MQ=60)

                                                                                     AGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGA          >  SRR4302540.6406109/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGTCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.3044192/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.2844919/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.1829930/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.9502345/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.9917767/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.8857746/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.8845327/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.38668/1‑94 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         <  SRR4302540.5966294/94‑1 (MQ=60)

                                                                                      GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG         >  SRR4302540.6537950/1‑94 (MQ=60)

                                                                                        AAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGAT       >  SRR4302540.631490/1‑94 (MQ=60)

                                                                                         AGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC      >  SRR4302540.6847070/1‑94 (MQ=60)

                                                                                         AGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGATC      >  SRR4302540.4741120/1‑94 (MQ=60)

                                                                                         AGGAGCGAACTAGGACCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC      >  SRR4302540.5267973/1‑94 (MQ=60)

                                                                                          GGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCC     >  SRR4302540.9236692/1‑94 (MQ=60)

                                                                                          GGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCC     <  SRR4302540.5760504/94‑1 (MQ=60)

                                                                                          GGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCC     <  SRR4302540.8130758/94‑1 (MQ=60)

                                                                                           GAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCT    <  SRR4302540.8677140/94‑1 (MQ=60)

                                                                                           GAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCT    <  SRR4302540.8643135/94‑1 (MQ=60)

                                                                                           GAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCT    >  SRR4302540.1723803/1‑94 (MQ=60)

                                                                                             GCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTCC  >  SRR4302540.1281570/1‑94 (MQ=60)

CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCCTCC  >  NC_000913/4211478‑4211664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`