Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,211,571 |
A→G |
R44R (CGT→CGC) |
yjaB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,211,571 | 0 | A | G | 100.0%
| 701.9
/ NA
| 219 | R44R (CGT→CGC) | yjaB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (118/101); total (118/101) |
Only 100 of 250 total aligned reads displayed.
ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC > NC_000913/4211481‑4211660
|
aTCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcg < 2:3260851/93‑1 (MQ=255)
tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga < 2:504450/93‑1 (MQ=255)
tCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcga > 2:4671790/1‑93 (MQ=255)
ccATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaa > 2:5420915/1‑93 (MQ=255)
cATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGgagcgaac > 2:2374468/1‑93 (MQ=255)
atatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACt > 2:783336/1‑93 (MQ=255)
tatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa < 1:2066092/93‑1 (MQ=255)
tatGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTa < 1:5539031/93‑1 (MQ=255)
gctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGt < 2:1607217/93‑1 (MQ=255)
gctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGt < 2:1357931/93‑1 (MQ=255)
ctgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtc < 2:1802634/93‑1 (MQ=255)
tgcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcc > 1:4569378/1‑93 (MQ=255)
gcCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcct < 2:5926686/93‑1 (MQ=255)
cccACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcctc < 1:4761758/93‑1 (MQ=255)
ccACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGtcctcc < 1:384360/93‑1 (MQ=255)
cACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCa < 2:2709971/93‑1 (MQ=255)
aCTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAg > 2:5855331/1‑93 (MQ=255)
aCTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAg > 2:5102269/1‑93 (MQ=255)
cTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGc > 1:5283009/1‑93 (MQ=255)
ttAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCt > 1:2420493/1‑93 (MQ=255)
ttAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCt < 2:2623615/93‑1 (MQ=255)
tAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGCCCCACCACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTc > 2:4239811/1‑93 (MQ=255)
gCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCgg > 2:2873030/1‑93 (MQ=255)
aaCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTc < 1:2219050/93‑1 (MQ=255)
aCATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTcc > 2:2240254/1‑93 (MQ=255)
aTAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGa > 2:5575660/1‑93 (MQ=255)
aTAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGa < 1:1215633/93‑1 (MQ=255)
tAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAt > 1:4306968/1‑93 (MQ=255)
aaaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATa < 2:1974110/93‑1 (MQ=255)
aaaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATa < 2:5718094/93‑1 (MQ=255)
aaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAc < 1:5221295/93‑1 (MQ=255)
aaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAc < 2:6169432/93‑1 (MQ=255)
aaTCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTACGATAc > 1:3436403/1‑93 (MQ=255)
tCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATActc > 1:5890862/1‑93 (MQ=255)
cAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctg > 1:5877071/1‑93 (MQ=255)
ccGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgctg < 1:4278043/93‑1 (MQ=255)
ccGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTctgctg > 1:4095297/1‑93 (MQ=255)
cGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGa > 2:6257919/1‑93 (MQ=255)
cGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGa < 2:5070094/93‑1 (MQ=255)
cGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGa > 1:5990485/1‑93 (MQ=255)
ggCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAt < 2:1517449/93‑1 (MQ=255)
ggCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAt < 2:1877537/93‑1 (MQ=255)
gCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATa < 2:4594742/93‑1 (MQ=255)
tGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGa > 2:3608056/1‑93 (MQ=255)
gATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaa > 2:5684062/1‑93 (MQ=255)
gATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaa > 1:4803334/1‑93 (MQ=255)
tCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaaaa > 2:2676854/1‑93 (MQ=255)
tCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGaaaa > 2:2500357/1‑93 (MQ=255)
cccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAt > 1:2166648/1‑93 (MQ=255)
ccGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATc > 2:5311331/1‑93 (MQ=255)
gCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGt < 2:818415/93‑1 (MQ=255)
gCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGt > 1:4690900/1‑93 (MQ=255)
gCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGt > 2:2109717/1‑93 (MQ=255)
cTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCNAGNTCGGTCCGATACTCTGCTGATAGAAAATCGTg > 2:5172061/1‑93 (MQ=255)
cTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTg > 2:1438650/1‑93 (MQ=255)
cTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTg > 1:3053971/1‑93 (MQ=255)
cTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTg > 1:5803939/1‑93 (MQ=255)
tCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAATCTGCTGATAGAAAATCGTgg > 2:4966016/1‑92 (MQ=255)
cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg < 1:2547530/93‑1 (MQ=255)
cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg > 1:3625880/1‑93 (MQ=255)
cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg > 1:4048720/1‑93 (MQ=255)
cATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAg < 1:3894688/93‑1 (MQ=255)
aTTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGt > 1:5100347/1‑93 (MQ=255)
ttAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTg < 1:6081245/93‑1 (MQ=255)
ttAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTg < 1:5820648/93‑1 (MQ=255)
ccGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAt < 1:1104726/93‑1 (MQ=255)
ccGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCAt < 2:449478/93‑1 (MQ=255)
gcgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCg > 2:887819/1‑93 (MQ=255)
cgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGa < 2:4939410/93‑1 (MQ=255)
cgACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGa > 1:237906/1‑93 (MQ=255)
gACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGAc < 1:5515353/93‑1 (MQ=255)
aCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACa > 2:3838825/1‑93 (MQ=255)
aCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACa > 1:6225892/1‑93 (MQ=255)
cccACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAg > 2:1035765/1‑93 (MQ=255)
ccACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGa > 1:1564913/1‑93 (MQ=255)
ccACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGa < 1:2879805/93‑1 (MQ=255)
cacaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGaa > 1:1412691/1‑93 (MQ=255)
cacaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGaa < 2:4413123/93‑1 (MQ=255)
cacaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGaa < 2:6271565/93‑1 (MQ=255)
cacaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGaa > 2:6077064/1‑93 (MQ=255)
acaACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAc < 2:1283613/93‑1 (MQ=255)
aCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGac > 2:911252/1‑93 (MQ=255)
aCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGac > 1:161132/1‑93 (MQ=255)
aCGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGAGGCATCGACAGAACGac > 2:2526596/1‑93 (MQ=255)
cGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGaca < 1:1973877/93‑1 (MQ=255)
cgcTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCa < 2:5513011/93‑1 (MQ=255)
cTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCaaa > 2:2046391/1‑93 (MQ=255)
tCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATc < 1:3151737/93‑1 (MQ=255)
ggCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCa > 1:1000414/1‑93 (MQ=255)
gCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCaa < 1:738934/93‑1 (MQ=255)
gCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCaa < 2:4494018/93‑1 (MQ=255)
gCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCaa < 2:717114/93‑1 (MQ=255)
aggaaggaGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACg > 1:3521976/1‑93 (MQ=255)
aggaaggaGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACg < 2:631498/93‑1 (MQ=255)
ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa > 1:6254485/1‑93 (MQ=255)
ggaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGa > 1:818627/1‑93 (MQ=255)
gaaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAg > 1:3608540/1‑93 (MQ=255)
aaggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGt > 2:3728861/1‑93 (MQ=255)
ggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTtc > 1:5065349/1‑93 (MQ=255)
ggagCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTtc > 2:2364727/1‑93 (MQ=255)
|
ATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC > NC_000913/4211481‑4211660
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCC > NC_000913/4211478‑4211661
|
CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAG > SRR4302533.1602898/1‑94 (MQ=60)
GCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGC > SRR4302533.3312822/1‑94 (MQ=60)
CATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCG < SRR4302533.4089995/94‑1 (MQ=60)
CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGCCCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC < SRR4302533.3149998/94‑1 (MQ=60)
CCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAAC > SRR4302533.1679078/1‑94 (MQ=60)
ATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTA > SRR4302533.3581596/1‑94 (MQ=60)
ATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTA > SRR4302533.3354589/1‑94 (MQ=60)
TATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAG < SRR4302533.2078825/94‑1 (MQ=60)
TATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAG < SRR4302533.5572478/94‑1 (MQ=60)
ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG < SRR4302533.893351/94‑1 (MQ=60)
ATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGG > SRR4302533.4401460/1‑94 (MQ=60)
CTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCC > SRR4302533.4597069/1‑94 (MQ=60)
TGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCT < SRR4302533.2491145/94‑1 (MQ=60)
GCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTC > SRR4302533.5244204/1‑94 (MQ=60)
CCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCC < SRR4302533.4341850/94‑1 (MQ=60)
CCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCC < SRR4302533.4790643/94‑1 (MQ=60)
CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA > SRR4302533.4918274/1‑94 (MQ=60)
CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA < SRR4302533.386679/94‑1 (MQ=60)
CCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACACACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA > SRR4302533.3636408/1‑94 (MQ=60)
CAACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCA < SRR4302533.5508245/94‑1 (MQ=60)
CACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAG < SRR4302533.25976/94‑1 (MQ=60)
ACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGC > SRR4302533.5314658/1‑94 (MQ=60)
CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT > SRR4302533.2230278/1‑94 (MQ=60)
CTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCT > SRR4302533.2435441/1‑94 (MQ=60)
TTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTC < SRR4302533.4649397/94‑1 (MQ=60)
TTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTC > SRR4302533.4780850/1‑94 (MQ=60)
TTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTC > SRR4302533.4780851/1‑94 (MQ=60)
TAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCG > SRR4302533.3462148/1‑94 (MQ=60)
AGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGG > SRR4302533.208968/1‑94 (MQ=60)
AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC > SRR4302533.5211706/1‑94 (MQ=60)
AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC < SRR4302533.5946136/94‑1 (MQ=60)
AACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCC < SRR4302533.2232750/94‑1 (MQ=60)
ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT > SRR4302533.4332888/1‑94 (MQ=60)
ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT > SRR4302533.6231501/1‑94 (MQ=60)
ATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGAT < SRR4302533.1222935/94‑1 (MQ=60)
AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATAC < SRR4302533.5607960/94‑1 (MQ=60)
AAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTACGATAC > SRR4302533.3457632/1‑94 (MQ=60)
AATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACT < SRR4302533.5252714/94‑1 (MQ=60)
AATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACT > SRR4302533.423177/1‑94 (MQ=60)
ATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTC > SRR4302533.5926447/1‑94 (MQ=60)
TCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCT < SRR4302533.1585047/94‑1 (MQ=60)
TCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCT < SRR4302533.6097842/94‑1 (MQ=60)
CCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTG > SRR4302533.5912597/1‑94 (MQ=60)
CCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTG < SRR4302533.5609356/94‑1 (MQ=60)
ACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTG > SRR4302533.4120229/1‑94 (MQ=60)
ACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTG < SRR4302533.4205961/94‑1 (MQ=60)
CCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGA < SRR4302533.2971785/94‑1 (MQ=60)
CCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGA > SRR4302533.6026771/1‑94 (MQ=60)
CCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGA < SRR4302533.4303768/94‑1 (MQ=60)
CGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGAT > SRR4302533.5107297/1‑94 (MQ=60)
GGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATA > SRR4302533.2055653/1‑94 (MQ=60)
GCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAG < SRR4302533.5846635/94‑1 (MQ=60)
CTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGA < SRR4302533.3577020/94‑1 (MQ=60)
TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA > SRR4302533.3808760/1‑94 (MQ=60)
TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA > SRR4302533.5393892/1‑94 (MQ=60)
TGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAA > SRR4302533.4832425/1‑94 (MQ=60)
GATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAA < SRR4302533.4801342/94‑1 (MQ=60)
ATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAA > SRR4302533.1495241/1‑94 (MQ=60)
TCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT < SRR4302533.928463/94‑1 (MQ=60)
TCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAAT > SRR4302533.2179974/1‑94 (MQ=60)
CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC > SRR4302533.6253212/1‑94 (MQ=60)
CCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATC < SRR4302533.5878666/94‑1 (MQ=60)
CCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCG > SRR4302533.6269423/1‑94 (MQ=60)
CCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCG > SRR4302533.74238/1‑94 (MQ=60)
CGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGT > SRR4302533.4719333/1‑94 (MQ=60)
GCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTG > SRR4302533.5838993/1‑94 (MQ=60)
GCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTG > SRR4302533.3072681/1‑94 (MQ=60)
CTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGA < SRR4302533.5915900/94‑1 (MQ=60)
TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG > SRR4302533.799441/1‑94 (MQ=60)
TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG < SRR4302533.4307123/94‑1 (MQ=60)
TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG > SRR4302533.3648189/1‑94 (MQ=60)
TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG > SRR4302533.4073377/1‑94 (MQ=60)
TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG < SRR4302533.5291612/94‑1 (MQ=60)
TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG < SRR4302533.1489469/94‑1 (MQ=60)
TCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAG > SRR4302533.4893445/1‑94 (MQ=60)
CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT < SRR4302533.2900444/94‑1 (MQ=60)
CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT < SRR4302533.2563209/94‑1 (MQ=60)
CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT < SRR4302533.3918452/94‑1 (MQ=60)
CATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGT > SRR4302533.5131157/1‑94 (MQ=60)
ATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTG > SRR4302533.1113117/1‑94 (MQ=60)
TTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGG < SRR4302533.6118020/94‑1 (MQ=60)
TTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGG < SRR4302533.2495815/94‑1 (MQ=60)
TTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGG > SRR4302533.5866402/1‑94 (MQ=60)
TTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGG < SRR4302533.5855809/94‑1 (MQ=60)
CCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATC < SRR4302533.1111271/94‑1 (MQ=60)
GCGACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGA > SRR4302533.239378/1‑94 (MQ=60)
GACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACA > SRR4302533.6263194/1‑94 (MQ=60)
GACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACA < SRR4302533.1052930/94‑1 (MQ=60)
GACCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACA < SRR4302533.5548650/94‑1 (MQ=60)
CCCACAACGGCGCTTCTGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGA < SRR4302533.3888112/94‑1 (MQ=60)
CCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGA > SRR4302533.1574332/1‑94 (MQ=60)
CCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGA > SRR4302533.6004851/1‑94 (MQ=60)
CCCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGATCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGA < SRR4302533.685345/94‑1 (MQ=60)
CCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAA > SRR4302533.1378511/1‑94 (MQ=60)
CCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAA > SRR4302533.1421235/1‑94 (MQ=60)
CCACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAA < SRR4302533.2897522/94‑1 (MQ=60)
CACAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC < SRR4302533.3985447/94‑1 (MQ=60)
CACAACGGCACTTCCGGCAGGAAGGAGCGAACTAGGTCCTCGAGCTCGGTCCGATCCTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAAC < SRR4302533.2287754/94‑1 (MQ=60)
CAACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGA > SRR4302533.1740475/1‑94 (MQ=60)
AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC > SRR4302533.4105678/1‑94 (MQ=60)
AACGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGAC > SRR4302533.162158/1‑94 (MQ=60)
CGGCGCTTCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACAC < SRR4302533.1985963/94‑1 (MQ=60)
CTTCCGGCAGGAAGGAGGGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAAT > SRR4302533.5554143/1‑94 (MQ=60)
TCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCG < SRR4302533.2297601/94‑1 (MQ=60)
TCCGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCG < SRR4302533.3171113/94‑1 (MQ=60)
CGGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCA > SRR4302533.1006253/1‑94 (MQ=60)
GGCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAA > SRR4302533.2398481/1‑94 (MQ=60)
GCAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAAC < SRR4302533.743287/94‑1 (MQ=60)
GAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACG < SRR4302533.3990817/94‑1 (MQ=60)
CAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACG > SRR4302533.3543685/1‑94 (MQ=60)
CAGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACG < SRR4302533.1179508/94‑1 (MQ=60)
AGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGA > SRR4302533.6291892/1‑94 (MQ=60)
AGGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGA > SRR4302533.823423/1‑94 (MQ=60)
GGAAGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAG > SRR4302533.3630754/1‑94 (MQ=60)
AGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC < SRR4302533.2129831/94‑1 (MQ=60)
AGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC < SRR4302533.3838560/94‑1 (MQ=60)
AGGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTC > SRR4302533.5095944/1‑94 (MQ=60)
GGAGCGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCC < SRR4302533.338727/94‑1 (MQ=60)
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CGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACTAGGTCCTCCAGCTCGGTCCGATACTCTGCTGATAGAAAATCGTGAGTGGCATCGACAGAACGACACCAAATCGCAACGAGTTCC > NC_000913/4211478‑4211661
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
