Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,227,795	A→G	intergenic (‑74/‑138)	pepE ← / → yjbC	peptidase E/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,227,795	0	A	G	99.4%	1591.4 / ‑4.5	503	intergenic (‑74/‑138)	pepE/yjbC	peptidase E/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (262/236); total (264/239)
Fisher's exact test for biased strand distribution p-value = 6.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 566 total aligned reads displayed.

ATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTT  >  NC_000913/4227706‑4227886

aTAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGa                                                                                          >  1:8707239/1‑93 (MQ=255)

 tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAt                                                                                         <  2:8179552/93‑1 (MQ=255)

 tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAt                                                                                         >  1:2589818/1‑93 (MQ=255)

 tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCCCGAt                                                                                         >  1:2499962/1‑93 (MQ=255)

   aaaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGt                                                                                       <  2:3908593/93‑1 (MQ=255)

   aaaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGt                                                                                       >  2:492844/1‑93 (MQ=255)

       cAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGca                                                                                   <  1:8567398/93‑1 (MQ=255)

        aGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGgac                                                                                  >  1:6173700/1‑93 (MQ=255)

        aGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcac                                                                                  <  1:8048879/93‑1 (MQ=255)

         gTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcaca                                                                                 <  1:6039597/93‑1 (MQ=255)

         gTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcaca                                                                                 <  1:4862219/93‑1 (MQ=255)

         gTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGcaca                                                                                 >  1:9820714/1‑93 (MQ=255)

          ttCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAt                                                                                <  2:4700552/93‑1 (MQ=255)

          ttCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAt                                                                                >  1:1999824/1‑93 (MQ=255)

          ttCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAt                                                                                >  1:6287393/1‑93 (MQ=255)

            ccATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCCCATTg                                                                              >  1:5027406/1‑93 (MQ=255)

            ccATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTg                                                                              <  2:4161050/93‑1 (MQ=255)

             cATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGGTGTCGCACATTGc                                                                             >  2:377116/1‑93 (MQ=255)

             cATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGc                                                                             >  2:5802422/1‑93 (MQ=255)

             cATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGc                                                                             <  2:8939614/93‑1 (MQ=255)

              aTTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCt                                                                            >  2:6204747/1‑93 (MQ=255)

              aTTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCt                                                                            <  2:4424223/93‑1 (MQ=255)

               ttACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCtt                                                                           <  1:9554398/93‑1 (MQ=255)

               ttACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATCTCGCACATTGCtt                                                                           >  1:4398981/1‑93 (MQ=255)

                tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                          <  2:1169190/93‑1 (MQ=255)

                tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                          <  2:1343479/93‑1 (MQ=255)

                tACTTATCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                          <  1:9223654/93‑1 (MQ=255)

                 aCTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCt                                                                         >  1:3633920/1‑93 (MQ=255)

                  cTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCCCATTGCTTCTg                                                                        >  1:5108946/1‑93 (MQ=255)

                   ttCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTgg                                                                       <  2:7133839/93‑1 (MQ=255)

                   ttCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTgg                                                                       <  2:8781815/93‑1 (MQ=255)

                    tctcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGa                                                                      <  2:6737053/93‑1 (MQ=255)

                      tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGaaa                                                                    <  2:3199297/93‑1 (MQ=255)

                      tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGaaa                                                                    >  1:5506206/1‑93 (MQ=255)

                       ccGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAg                                                                   >  2:2043461/1‑93 (MQ=255)

                         ggTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTg                                                                 >  1:1202991/1‑93 (MQ=255)

                         ggTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTg                                                                 >  2:7780716/1‑93 (MQ=255)

                          gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                                >  2:5465830/1‑93 (MQ=255)

                          gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                                >  2:594467/1‑93 (MQ=255)

                           ttAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAt                                                               <  2:2459038/93‑1 (MQ=255)

                            tAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGGAAGAGAtt                                                              >  1:6857950/1‑93 (MQ=255)

                            tAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAtt                                                              <  2:9499625/93‑1 (MQ=255)

                              gTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTg                                                            >  1:1003373/1‑93 (MQ=255)

                               tAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGa                                                           <  1:270299/93‑1 (MQ=255)

                               tAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGa                                                           <  1:1798036/93‑1 (MQ=255)

                                 aGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGc                                                         <  2:4314265/93‑1 (MQ=255)

                                 aGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGc                                                         <  2:5024556/93‑1 (MQ=255)

                                  gAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCa                                                        <  2:1773586/93‑1 (MQ=255)

                                  gAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCa                                                        >  2:7987324/1‑93 (MQ=255)

                                  gAAATCACGGGAAGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAAGTCGCACATTGCTTCTGGAAAGTGATTTGAGcg                                                        >  2:2195673/1‑92 (MQ=255)

                                     aTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGt                                                     <  1:9348299/93‑1 (MQ=255)

                                     aTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGt                                                     <  1:4525444/93‑1 (MQ=255)

                                      tCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTa                                                    <  1:7504272/93‑1 (MQ=255)

                                      acACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATCGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTa                                                    <  1:5233709/92‑1 (MQ=255)

                                       cACGGGAGGCATGCTACCACTGCGAAGTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTaa                                                   <  1:8446038/93‑1 (MQ=255)

                                         cGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACg                                                 >  1:1665304/1‑93 (MQ=255)

                                          gggAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGa                                                <  1:2374374/93‑1 (MQ=255)

                                           ggAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGaa                                               >  2:2339686/1‑93 (MQ=255)

                                               gCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCa                                           <  2:8491051/93‑1 (MQ=255)

                                                cATGCTCCCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCaa                                          <  1:8859223/93‑1 (MQ=255)

                                                  tGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGc                                        >  2:1007101/1‑93 (MQ=255)

                                                  tGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGc                                        >  2:2999067/1‑93 (MQ=255)

                                                    cTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCa                                      <  1:1518905/93‑1 (MQ=255)

                                                     tACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCaa                                     >  1:32720/1‑93 (MQ=255)

                                                       ccACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATg                                   <  2:1534569/93‑1 (MQ=255)

                                                        cACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATgg                                  <  1:2788055/93‑1 (MQ=255)

                                                          cagCGAATTTAACCACTTACTGACATGGCTCTCGATGCCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGaa                                <  1:6617794/91‑1 (MQ=255)

                                                          cTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGaa                                <  2:6331604/93‑1 (MQ=255)

                                                           tGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCGCATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGaaa                               >  2:6085448/1‑93 (MQ=255)

                                                           tGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGaaa                               >  2:7569113/1‑93 (MQ=255)

                                                             cGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATa                             <  2:9830840/93‑1 (MQ=255)

                                                             cGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATa                             <  2:9143404/93‑1 (MQ=255)

                                                             cGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATa                             <  1:4246327/93‑1 (MQ=255)

                                                               aaTTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAAc                           <  1:4070337/93‑1 (MQ=255)

                                                                aTTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGTTAACGAATTCAAGCCAATGGAAATAACa                          <  2:6439932/93‑1 (MQ=255)

                                                                aTTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACa                          >  1:3157870/1‑93 (MQ=255)

                                                                 tttAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaa                         <  2:2770975/93‑1 (MQ=255)

                                                                  ttAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaaa                        <  1:5746155/93‑1 (MQ=255)

                                                                   tAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAt                       <  2:7229920/93‑1 (MQ=255)

                                                                    aaCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                      >  1:3420441/1‑93 (MQ=255)

                                                                    aaCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                      <  1:3841287/93‑1 (MQ=255)

                                                                       cACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAAAAAATAGtt                   >  2:7474110/1‑93 (MQ=255)

                                                                        aCTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTc                  >  2:1682295/1‑93 (MQ=255)

                                                                         cTTACTGACATGGCTCGCTATGTCGCACATTGTTTCGGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCg                 <  2:6839720/93‑1 (MQ=255)

                                                                         cTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTcc                 >  1:2113156/1‑92 (MQ=255)

                                                                          ttACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGc                >  2:6505341/1‑93 (MQ=255)

                                                                          ttACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGc                >  1:7020496/1‑93 (MQ=255)

                                                                          ttACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGc                <  2:9408431/93‑1 (MQ=255)

                                                                             cTGACATGGCTGGCGATGTCGCAGATTGCTCCTGGAAAGTCATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCa             <  1:4734658/93‑1 (MQ=255)

                                                                             cTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCa             >  1:8209689/1‑93 (MQ=255)

                                                                               gACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATg           <  2:8298707/93‑1 (MQ=255)

                                                                               gACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATg           <  1:8901426/93‑1 (MQ=255)

                                                                                aCATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGa          >  1:3036820/1‑93 (MQ=255)

                                                                                 cATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAc         <  2:9743438/93‑1 (MQ=255)

                                                                                 cATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAc         <  2:3379377/93‑1 (MQ=255)

                                                                                  aTGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACt        >  2:5728801/1‑93 (MQ=255)

                                                                                  aTGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACt        <  1:7152361/93‑1 (MQ=255)

                                                                                   tGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTa       >  1:2264500/1‑93 (MQ=255)

                                                                                      cTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTAttt    >  2:5619290/1‑93 (MQ=255)

                                                                                        cACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTAttttt  <  1:7719682/93‑1 (MQ=255)

ATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTT  >  NC_000913/4227706‑4227886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 299 total aligned reads displayed.

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTTA  >  NC_000913/4227702‑4227888

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                               >  SRR4302540.724382/1‑94 (MQ=60)

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                               <  SRR4302540.10072027/94‑1 (MQ=60)

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                               >  SRR4302540.9872141/1‑94 (MQ=60)

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                               >  SRR4302540.5849730/1‑94 (MQ=60)

  CAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCG                                                                                             <  SRR4302540.2899337/94‑1 (MQ=60)

   AATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGA                                                                                            >  SRR4302540.8808307/1‑94 (MQ=60)

    ATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAT                                                                                           >  SRR4302540.2617736/1‑94 (MQ=60)

    ATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAT                                                                                           >  SRR4302540.2617737/1‑94 (MQ=60)

    ATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAT                                                                                           <  SRR4302540.932971/94‑1 (MQ=60)

    ATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCCCGAT                                                                                           >  SRR4302540.2526929/1‑94 (MQ=60)

     TAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATG                                                                                          >  SRR4302540.8981026/1‑94 (MQ=60)

       AAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTG                                                                                        >  SRR4302540.1621674/1‑94 (MQ=60)

       AAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTC                                                                                        <  SRR4302540.1102238/94‑1 (MQ=60)

       AAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTC                                                                                        >  SRR4302540.2774628/1‑94 (MQ=60)

       AAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATAACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGACGTC                                                                                        >  SRR4302540.2774629/1‑94 (MQ=60)

       AAAGCAGTTCAATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTC                                                                                        <  SRR4302540.4034941/94‑1 (MQ=60)

        AAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG                                                                                       >  SRR4302540.6117227/1‑94 (MQ=60)

        AAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG                                                                                       <  SRR4302540.2336947/94‑1 (MQ=60)

           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGGAC                                                                                    >  SRR4302540.6242489/1‑94 (MQ=60)

           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCAC                                                                                    <  SRR4302540.8666896/94‑1 (MQ=60)

           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCAC                                                                                    >  SRR4302540.1822481/1‑94 (MQ=60)

           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCAC                                                                                    <  SRR4302540.5941204/94‑1 (MQ=60)

           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCAC                                                                                    <  SRR4302540.7160030/94‑1 (MQ=60)

           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCAC                                                                                    >  SRR4302540.769744/1‑94 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACA                                                                                   >  SRR4302540.6841213/1‑94 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACA                                                                                   >  SRR4302540.315094/1‑94 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACA                                                                                   >  SRR4302540.2589997/1‑94 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACA                                                                                   >  SRR4302540.6894789/1‑94 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACA                                                                                   >  SRR4302540.7879811/1‑94 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACA                                                                                   <  SRR4302540.8142374/94‑1 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACA                                                                                   >  SRR4302540.9935619/1‑94 (MQ=60)

             GTTGCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                  <  SRR4302540.7123127/94‑1 (MQ=60)

             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                  >  SRR4302540.7241719/1‑94 (MQ=60)

             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                  <  SRR4302540.4914362/94‑1 (MQ=60)

             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                  >  SRR4302540.1304417/1‑94 (MQ=60)

             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                  <  SRR4302540.6106661/94‑1 (MQ=60)

             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                  >  SRR4302540.6357380/1‑94 (MQ=60)

             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCCCGATGTCGCACAT                                                                                  >  SRR4302540.2021480/1‑94 (MQ=60)

              TTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATT                                                                                 >  SRR4302540.5159959/1‑94 (MQ=60)

              TTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATT                                                                                 >  SRR4302540.5159962/1‑94 (MQ=60)

              TTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATT                                                                                 >  SRR4302540.6903684/1‑94 (MQ=60)

              TTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATCGCTCGCGATGTCGCAtctt                                                                                 >  SRR4302540.6213675/1‑90 (MQ=60)

               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTG                                                                                >  SRR4302540.5081820/1‑94 (MQ=60)

               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTG                                                                                <  SRR4302540.6254650/94‑1 (MQ=60)

                CCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGC                                                                               <  SRR4302540.3954368/94‑1 (MQ=60)

                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCT                                                                              >  SRR4302540.2187499/1‑94 (MQ=60)

                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCT                                                                              >  SRR4302540.2062421/1‑94 (MQ=60)

                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCT                                                                              >  SRR4302540.476574/1‑94 (MQ=60)

                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTT                                                                             >  SRR4302540.4446691/1‑94 (MQ=60)

                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTT                                                                             <  SRR4302540.7015271/94‑1 (MQ=60)

                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTT                                                                             >  SRR4302540.9716591/1‑94 (MQ=60)

                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTT                                                                             >  SRR4302540.5201730/1‑94 (MQ=60)

                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATCTCGCACATTGCTT                                                                             >  SRR4302540.4446692/1‑94 (MQ=60)

                   TTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTC                                                                            <  SRR4302540.9667396/94‑1 (MQ=60)

                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCT                                                                           >  SRR4302540.266740/1‑94 (MQ=60)

                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCT                                                                           >  SRR4302540.266741/1‑94 (MQ=60)

                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCCTCT                                                                           >  SRR4302540.7036001/1‑94 (MQ=60)

                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTG                                                                          >  SRR4302540.8590438/1‑94 (MQ=60)

                      CTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGG                                                                         <  SRR4302540.9529560/94‑1 (MQ=60)

                        TCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTTGAA                                                                       <  SRR4302540.5321615/94‑1 (MQ=60)

                        TCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGGA                                                                       >  SRR4302540.447079/1‑94 (MQ=60)

                        TCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAA                                                                       >  SRR4302540.1651523/1‑94 (MQ=60)

                        TCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAA                                                                       >  SRR4302540.3084738/1‑94 (MQ=60)

                        TCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCCCGATGTCGCACATTGCTTCTGGAA                                                                       >  SRR4302540.305029/1‑94 (MQ=60)

                         CTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTcgaca                                                                      >  SRR4302540.1190412/1‑89 (MQ=60)

                         CTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAA                                                                      >  SRR4302540.4144894/1‑94 (MQ=60)

                          TCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTtggggagg                                                                     >  SRR4302540.3297145/1‑86 (MQ=60)

                           CCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCCCTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGG                                                                    >  SRR4302540.5441846/1‑94 (MQ=60)

                           CCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGT                                                                    <  SRR4302540.8452221/94‑1 (MQ=60)

                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTG                                                                   <  SRR4302540.9398647/94‑1 (MQ=60)

                             GGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGA                                                                  <  SRR4302540.3367212/94‑1 (MQ=60)

                              GTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAT                                                                 <  SRR4302540.3736113/94‑1 (MQ=60)

                              GTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAT                                                                 >  SRR4302540.3595626/1‑94 (MQ=60)

                              GTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAT                                                                 >  SRR4302540.8159764/1‑94 (MQ=60)

                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTACTTATGGAAAGGGATT                                                                >  SRR4302540.8831355/1‑94 (MQ=60)

                                TAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGTGATGTCGCACATTGCTTCTGGAAAGTGATTT                                                               <  SRR4302540.3261544/94‑1 (MQ=60)

                                TAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTT                                                               >  SRR4302540.7009314/1‑94 (MQ=60)

                                TAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTT                                                               <  SRR4302540.100628/94‑1 (MQ=60)

                                TAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTT                                                               >  SRR4302540.2753710/1‑94 (MQ=60)

                                 AGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTG                                                              >  SRR4302540.1013558/1‑94 (MQ=60)

                                  GTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGCCATGGCTCGCGATGGCGCACATTTGTTCTGGAAAGTGtgttgg                                                             >  SRR4302540.7895850/1‑88 (MQ=60)

                                  GTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGA                                                             >  SRR4302540.1546561/1‑94 (MQ=60)

                                   TAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAG                                                            <  SRR4302540.272959/94‑1 (MQ=60)

                                     AGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCA                                                          >  SRR4302540.4938353/1‑94 (MQ=60)

                                     AGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCA                                                          <  SRR4302540.3739674/94‑1 (MQ=60)

                                     AGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACCTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCA                                                          >  SRR4302540.4470811/1‑94 (MQ=60)

                                      GAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAG                                                         <  SRR4302540.6633522/94‑1 (MQ=60)

                                        AATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGT                                                       >  SRR4302540.5604145/1‑94 (MQ=60)

                                        AATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGT                                                       <  SRR4302540.866660/94‑1 (MQ=60)

                                         ATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTA                                                      <  SRR4302540.4574445/94‑1 (MQ=60)

                                         ATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTA                                                      <  SRR4302540.9459654/94‑1 (MQ=60)

                                          TCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAA                                                     <  SRR4302540.7588139/94‑1 (MQ=60)

                                          ACACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATCGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAA                                                     <  SRR4302540.5290799/94‑1 (MQ=60)

                                           CACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAC                                                    <  SRR4302540.8544084/94‑1 (MQ=60)

                                           CACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAC                                                    <  SRR4302540.6268421/94‑1 (MQ=60)

                                           CACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAC                                                    <  SRR4302540.7787800/94‑1 (MQ=60)

                                           CACGGGAGGCATGCTACCACTGCGAAGTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAC                                                    <  SRR4302540.8544083/94‑1 (MQ=60)

                                           CACCGGAGGCATGCTACCACTGCGAAGTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAC                                                    <  SRR4302540.6268420/94‑1 (MQ=60)

                                            ACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACG                                                   >  SRR4302540.1533398/1‑94 (MQ=60)

                                             CGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGA                                                  <  SRR4302540.4896025/94‑1 (MQ=60)

                                             CGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGA                                                  <  SRR4302540.4896026/94‑1 (MQ=60)

                                              GGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAA                                                 >  SRR4302540.563396/1‑94 (MQ=60)

                                              GGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAA                                                 <  SRR4302540.2399956/94‑1 (MQ=60)

                                              GGGAGGCATGCTACCACTGCGAATTCAACCCCTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAA                                                 <  SRR4302540.733602/94‑1 (MQ=60)

                                               GGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAAT                                                <  SRR4302540.2460164/94‑1 (MQ=60)

                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                              >  SRR4302540.7070483/1‑94 (MQ=60)

                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                              >  SRR4302540.2079546/1‑94 (MQ=60)

                                                  GGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCA                                             <  SRR4302540.1208677/94‑1 (MQ=60)

                                                   GCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAA                                            <  SRR4302540.5073574/94‑1 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAC                                           >  SRR4302540.3516395/1‑94 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCCCGGAGTCGCACACTGCTTCTGCGAAGCGATTTGAGCAGCCAACGAATTCAAG                                           >  SRR4302540.4342488/1‑94 (MQ=53)

                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTTGCACATTGCTTCGGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                          >  SRR4302540.9808001/1‑94 (MQ=60)

                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                          >  SRR4302540.242196/1‑94 (MQ=60)

                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                          >  SRR4302540.2266020/1‑94 (MQ=60)

                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                          >  SRR4302540.6644498/1‑94 (MQ=60)

                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGGAACGAATTCAAGC                                          >  SRR4302540.8297697/1‑94 (MQ=60)

                                                      TGCTACCATTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTggaacattggttttgggacggggtttgagcggggagggtattacagca                                         >  SRR4302540.3650497/1‑46 (MQ=60)

                                                      TGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCC                                         <  SRR4302540.1804733/94‑1 (MQ=60)

                                                      TGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCC                                         <  SRR4302540.1688764/94‑1 (MQ=60)

                                                      TGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCA                                         >  SRR4302540.3650496/1‑94 (MQ=60)

                                                       GCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGaagcgctagatcggaagagc                                        >  SRR4302540.2845368/1‑74 (MQ=60)

                                                       GCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCA                                        >  SRR4302540.7107260/1‑94 (MQ=60)

                                                       GCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCA                                        <  SRR4302540.1845831/94‑1 (MQ=60)

                                                        CTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAA                                       <  SRR4302540.1535712/94‑1 (MQ=60)

                                                        CTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAA                                       >  SRR4302540.7844337/1‑94 (MQ=60)

                                                        CTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAA                                       >  SRR4302540.33068/1‑94 (MQ=60)

                                                         TACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAT                                      <  SRR4302540.718472/94‑1 (MQ=60)

                                                          ACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATG                                     >  SRR4302540.6764695/1‑94 (MQ=60)

                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGG                                    <  SRR4302540.3003071/94‑1 (MQ=60)

                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGG                                    >  SRR4302540.2388982/1‑94 (MQ=60)

                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGG                                    <  SRR4302540.9551980/94‑1 (MQ=60)

                                                            CACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGA                                   >  SRR4302540.8969482/1‑94 (MQ=60)

                                                            CACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGA                                   <  SRR4302540.3868437/94‑1 (MQ=60)

                                                              CTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGGAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAA                                 >  SRR4302540.4176583/1‑94 (MQ=60)

                                                              CTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAA                                 <  SRR4302540.1809245/94‑1 (MQ=60)

                                                              CTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAA                                 <  SRR4302540.9000757/94‑1 (MQ=60)

                                                              CTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAA                                 <  SRR4302540.841204/94‑1 (MQ=60)

                                                              CTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAA                                 <  SRR4302540.4762046/94‑1 (MQ=60)

                                                               TGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAAT                                <  SRR4302540.9146836/94‑1 (MQ=60)

                                                                 CGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAA                              <  SRR4302540.7332322/94‑1 (MQ=60)

                                                                 CGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAA                              >  SRR4302540.3437060/1‑94 (MQ=60)

                                                                 CAAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAA                              <  SRR4302540.8762977/94‑1 (MQ=60)

                                                                   AATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACA                            <  SRR4302540.4114214/94‑1 (MQ=60)

                                                                   AATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACA                            >  SRR4302540.3192237/1‑94 (MQ=60)

                                                                   AATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACA                            >  SRR4302540.1689291/1‑94 (MQ=60)

                                                                      TTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAT                         <  SRR4302540.5934460/94‑1 (MQ=60)

                                                                      TTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAT                         <  SRR4302540.2107359/94‑1 (MQ=60)

                                                                      TTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAT                         <  SRR4302540.5809528/94‑1 (MQ=60)

                                                                       TAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATA                        <  SRR4302540.5375319/94‑1 (MQ=60)

                                                                       TAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATA                        <  SRR4302540.5232948/94‑1 (MQ=60)

                                                                       TAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATA                        >  SRR4302540.3457645/1‑94 (MQ=60)

                                                                        AACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                       >  SRR4302540.10027957/1‑94 (MQ=60)

                                                                        AACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                       <  SRR4302540.3883063/94‑1 (MQ=60)

                                                                        AACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                       <  SRR4302540.2581238/94‑1 (MQ=60)

                                                                         ACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGT                      >  SRR4302540.2173779/1‑94 (MQ=60)

                                                                         ACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGT                      <  SRR4302540.4258222/94‑1 (MQ=60)

                                                                         ACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGT                      <  SRR4302540.4347879/94‑1 (MQ=60)

                                                                           CACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTC                    <  SRR4302540.8811248/94‑1 (MQ=60)

                                                                            ACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCG                   <  SRR4302540.2587911/94‑1 (MQ=60)

                                                                            ACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCG                   >  SRR4302540.9440863/1‑94 (MQ=60)

                                                                            ACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCC                   >  SRR4302540.2135838/1‑94 (MQ=60)

                                                                              TTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCT                 >  SRR4302540.4565824/1‑94 (MQ=60)

                                                                              TTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCT                 >  SRR4302540.5165635/1‑94 (MQ=60)

                                                                              TTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCT                 <  SRR4302540.8917853/94‑1 (MQ=60)

                                                                              TTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCC                 >  SRR4302540.2005338/1‑94 (MQ=60)

                                                                              TTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAAAAACAAATAGTTCGCC                 >  SRR4302540.3140494/1‑94 (MQ=60)

                                                                                ACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCA               >  SRR4302540.8305106/1‑94 (MQ=60)

                                                                                 CTGACATGGCTGGCGATGTCGCAGATTGCTCCTGGAAAGTCATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              <  SRR4302540.4785209/94‑1 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCAGATTGCTTCTGGAAAGTGATTGGAGCAGGTAACGAATACAAGCCAATGGAAATAACAAATAGTTCGCTCAT              <  SRR4302540.4247525/94‑1 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              <  SRR4302540.1381935/94‑1 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              >  SRR4302540.3978320/1‑94 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              >  SRR4302540.9273019/1‑94 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              >  SRR4302540.5026922/1‑94 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              <  SRR4302540.3413263/94‑1 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              <  SRR4302540.5804161/94‑1 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              <  SRR4302540.6484485/94‑1 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT              >  SRR4302540.319034/1‑94 (MQ=60)

                                                                                   tacgTGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGA            <  SRR4302540.5113440/90‑1 (MQ=60)

                                                                                   GACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGA            <  SRR4302540.9004468/94‑1 (MQ=60)

                                                                                   GACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGA            >  SRR4302540.3070147/1‑94 (MQ=60)

                                                                                    ACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACCAGTAGTTCGCTCATGAC           >  SRR4302540.6139307/1‑94 (MQ=60)

                                                                                    ACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAC           >  SRR4302540.8714419/1‑94 (MQ=60)

                                                                                     CATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACT          <  SRR4302540.983321/94‑1 (MQ=60)

                                                                                      ATGGCTCGCGATGTCGCCCATTGCTTCTGGAAAGTGATTTGAGCAGGGAACGAATTCAAGCCAATGGAAATAACCAATAAATCGCTCATGACTA         >  SRR4302540.4979591/1‑94 (MQ=60)

                                                                                      ATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTT         >  SRR4302540.3251689/1‑94 (MQ=60)

                                                                                      ATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTA         <  SRR4302540.7616429/94‑1 (MQ=60)

                                                                                      ATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTA         >  SRR4302540.2288800/1‑94 (MQ=60)

                                                                                      ATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTA         >  SRR4302540.8333610/1‑94 (MQ=60)

                                                                                      ATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCCCTCATGACTA         >  SRR4302540.9366815/1‑94 (MQ=60)

                                                                                      ATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGGGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTA         >  SRR4302540.2358105/1‑94 (MQ=60)

                                                                                        GGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATT       <  SRR4302540.5763357/94‑1 (MQ=60)

                                                                                        GGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGCTCGCTCATGACTATT       >  SRR4302540.9201822/1‑94 (MQ=60)

                                                                                         GCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT      <  SRR4302540.4727456/94‑1 (MQ=60)

                                                                                         GCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT      <  SRR4302540.8231294/94‑1 (MQ=60)

                                                                                          CTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGCAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTT     >  SRR4302540.8599454/1‑94 (MQ=60)

                                                                                           TCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTT    >  SRR4302540.9212630/1‑94 (MQ=60)

                                                                                           TCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTT    <  SRR4302540.1479491/94‑1 (MQ=60)

                                                                                            CGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTT   <  SRR4302540.916073/94‑1 (MQ=60)

                                                                                            CACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTT   <  SRR4302540.7809130/94‑1 (MQ=60)

                                                                                             GCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTTA  <  SRR4302540.552838/94‑1 (MQ=60)

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTTA  >  NC_000913/4227702‑4227888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`