Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,236,786	A→G	Y525C (TAC→TGC)	yjbH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,236,786	0	A	G	99.7%	1248.4 / ‑5.4	387	Y525C (TAC→TGC)	yjbH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (173/212); total (174/213)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.60e-01

Only 100 of 405 total aligned reads displayed.

TGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATG  >  NC_000913/4236696‑4236875

tgCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCg                                                                                         >  1:7055429/1‑93 (MQ=255)

 gcgcGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCgg                                                                                        <  2:5356527/93‑1 (MQ=255)

 gcgcGAGTATGTGCAGAACGATGTCTAAGTTAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCgg                                                                                        <  1:8006654/93‑1 (MQ=255)

  cgcgAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCggt                                                                                       <  1:9779893/93‑1 (MQ=255)

   gcgAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCggtg                                                                                      >  1:455806/1‑93 (MQ=255)

     gAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCggtggt                                                                                    <  1:2464180/93‑1 (MQ=255)

     gAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACggtggt                                                                                    >  1:9269322/1‑93 (MQ=255)

      aGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGtt                                                                                   >  1:4340049/1‑93 (MQ=255)

       gTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTa                                                                                  <  1:9447465/93‑1 (MQ=255)

        tATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAt                                                                                 >  2:7793933/1‑93 (MQ=255)

          tgtgCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACTGCTTCTACGGTCAGGTCTGCGGTGGTTAtct                                                                               >  1:4920101/1‑93 (MQ=255)

          tgtgCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAtct                                                                               <  2:2294240/93‑1 (MQ=255)

          tgtgCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAtct                                                                               <  1:611340/93‑1 (MQ=255)

           gtgCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAtctc                                                                              <  1:8476232/93‑1 (MQ=255)

           gtgCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAtctc                                                                              <  2:2722834/93‑1 (MQ=255)

                  aCGATGTGTATGTGAATAACATGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCa                                                                       <  1:2603767/93‑1 (MQ=255)

                  aCGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCa                                                                       <  1:8997664/93‑1 (MQ=255)

                  aCGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCa                                                                       <  1:6417516/93‑1 (MQ=255)

                   cGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCAt                                                                      <  2:9809441/93‑1 (MQ=255)

                     aTGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGt                                                                    >  1:3147881/1‑93 (MQ=255)

                     aTGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGt                                                                    <  2:6779270/93‑1 (MQ=255)

                     aTGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGt                                                                    >  1:1566917/1‑93 (MQ=255)

                     aTGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGt                                                                    >  1:2119883/1‑93 (MQ=255)

                      tGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGtt                                                                   <  2:9505776/93‑1 (MQ=255)

                      tGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGtt                                                                   >  2:8162703/1‑93 (MQ=255)

                      tGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGtt                                                                   <  2:7566323/93‑1 (MQ=255)

                       gTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGttt                                                                  <  2:3820824/93‑1 (MQ=255)

                         cTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTgg                                                                <  2:2941921/93‑1 (MQ=255)

                           aTGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCg                                                              <  2:6402004/93‑1 (MQ=255)

                            tgtgAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCgg                                                             <  1:5048109/93‑1 (MQ=255)

                            tgtgAATAACCTGCAAGCCAACTACTGCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCgg                                                             <  1:3024148/93‑1 (MQ=255)

                             gtgAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGt                                                            <  2:7342688/93‑1 (MQ=255)

                             gtgAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGt                                                            <  1:6606166/93‑1 (MQ=255)

                               caaTAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGc                                                          <  2:5171615/92‑1 (MQ=255)

                                aaTAACCTGCAAGCCAACTACTTCCAGCGTCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCg                                                         >  1:9098237/1‑93 (MQ=255)

                                aaTAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCg                                                         <  2:3575396/93‑1 (MQ=255)

                                  tAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCggg                                                       >  2:4474509/1‑93 (MQ=255)

                                   aaCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCgggg                                                      <  1:7758770/93‑1 (MQ=255)

                                   aaCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCgggg                                                      >  2:210569/1‑93 (MQ=255)

                                    aCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCggggg                                                     >  1:7224441/1‑93 (MQ=255)

                                      cTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCa                                                   <  2:3453399/93‑1 (MQ=255)

                                           aGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAgt                                              >  2:3871061/1‑93 (MQ=255)

                                           aGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAgg                                              >  2:3151931/1‑92 (MQ=255)

                                           aGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAgg                                              >  1:1020404/1‑92 (MQ=255)

                                            gCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAgtg                                             >  1:7551563/1‑93 (MQ=255)

                                             ccAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTTGCGGTGCGGGGGCAGAAgtgt                                            >  2:5451730/1‑93 (MQ=255)

                                              cAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGtgtt                                           >  1:5684445/1‑93 (MQ=255)

                                                actactTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGtgttgt                                         >  2:2452954/1‑93 (MQ=255)

                                                actactTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGtgttgt                                         <  2:3301050/93‑1 (MQ=255)

                                                 ctactTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTa                                        <  1:3294877/93‑1 (MQ=255)

                                                  tactTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTAt                                       <  1:1471933/93‑1 (MQ=255)

                                                  tactTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTAt                                       <  1:5329818/93‑1 (MQ=255)

                                                   actTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATc                                      <  2:6254669/93‑1 (MQ=255)

                                                     ttCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGc                                    >  1:1081080/1‑93 (MQ=255)

                                                     ttCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGc                                    >  1:5439134/1‑93 (MQ=255)

                                                       ccAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGccc                                  <  1:4025355/93‑1 (MQ=255)

                                                          gCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCt                               >  1:5895819/1‑93 (MQ=255)

                                                          gCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCt                               <  2:6176702/93‑1 (MQ=255)

                                                           gaTCTGGGCAACGGCGTCGACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGCGTTGTATCGCCCGCTg                              <  1:7174915/92‑1 (MQ=255)

                                                            aTCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTgg                             >  1:3865483/1‑93 (MQ=255)

                                                             tCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGa                            >  2:5810481/1‑93 (MQ=255)

                                                              cTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGAc                           <  1:1166343/93‑1 (MQ=255)

                                                               tGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACa                          >  1:5810695/1‑93 (MQ=255)

                                                               tGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACa                          <  2:9347284/93‑1 (MQ=255)

                                                                gggCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCCGAAGTGTTGTATCGCCCGCTGGACAg                         >  1:1913378/1‑93 (MQ=255)

                                                                 ggCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGc                        >  1:521601/1‑93 (MQ=255)

                                                                  gCAACGACATCTGCGGTCAGTTCTTCGGTGGTAATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCa                       <  1:1787353/93‑1 (MQ=255)

                                                                   cAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCaa                      <  2:1582048/93‑1 (MQ=255)

                                                                   cAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCaa                      <  2:8368720/93‑1 (MQ=255)

                                                                    aaaggCTTTTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAc                     <  2:2003557/90‑1 (MQ=255)

                                                                    aaCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAc                     <  1:922323/93‑1 (MQ=255)

                                                                    aaCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAc                     <  1:7825035/93‑1 (MQ=255)

                                                                    aaCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAc                     <  1:9574696/93‑1 (MQ=255)

                                                                     aCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACt                    >  2:412122/1‑93 (MQ=255)

                                                                     aCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACt                    >  2:4306848/1‑93 (MQ=255)

                                                                     aCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACt                    >  1:5148078/1‑93 (MQ=255)

                                                                         cTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGc                <  1:1264624/93‑1 (MQ=255)

                                                                         cTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGc                >  2:8896577/1‑93 (MQ=255)

                                                                             tACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGttt            <  1:3679212/93‑1 (MQ=255)

                                                                             tACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGttt            <  2:10033713/93‑1 (MQ=255)

                                                                              tcgctCAGGTCTGCGGTTGTTATCTCGAAGCCATGTTTGGCGGTGCGGGGGAAGAAGTGTTGTATCGCCCGCTGGACAGCTACTGGGCGTTTg           <  2:1813450/89‑1 (MQ=255)

                                                                              aCGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTg           <  2:9075851/93‑1 (MQ=255)

                                                                              aCGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTg           <  2:1278114/93‑1 (MQ=255)

                                                                                ggTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGt         <  1:2736474/93‑1 (MQ=255)

                                                                                ggTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGt         <  2:6947041/93‑1 (MQ=255)

                                                                                ggTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGt         >  1:2023586/1‑93 (MQ=255)

                                                                                 gTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTc        <  2:6576211/93‑1 (MQ=255)

                                                                                 gTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTc        <  1:133107/93‑1 (MQ=255)

                                                                                 gTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTc        >  2:8013746/1‑93 (MQ=255)

                                                                                  tCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCt       >  2:2818638/1‑93 (MQ=255)

                                                                                   cAGGTCGTCGGTGGTTAGCTCGAAACCATGTTTGGCTGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTg      <  1:8371585/93‑1 (MQ=255)

                                                                                    aGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGGCAGCAACTGGGCGTTTGGTCTgg     >  2:5504951/1‑93 (MQ=255)

                                                                                    aGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTgg     <  1:8744541/93‑1 (MQ=255)

                                                                                    aGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTgg     <  1:1621713/93‑1 (MQ=255)

                                                                                    aGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTgg     >  2:8631254/1‑93 (MQ=255)

                                                                                    aGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTgg     <  2:3387227/93‑1 (MQ=255)

                                                                                      gTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAt   <  1:9863318/93‑1 (MQ=255)

                                                                                      gTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAt   <  1:2890914/93‑1 (MQ=255)

                                                                                       tCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATg  >  2:7041144/1‑93 (MQ=255)

                                                                                       tCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATg  <  2:4799196/93‑1 (MQ=255)

TGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATG  >  NC_000913/4236696‑4236875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.

ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCA  >  NC_000913/4236693‑4236878

ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTG                                                                                              >  SRR4302540.5427225/1‑94 (MQ=60)

ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTG                                                                                              >  SRR4302540.4873694/1‑94 (MQ=60)

ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTG                                                                                              <  SRR4302540.4228455/94‑1 (MQ=60)

ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTG                                                                                              >  SRR4302540.4455437/1‑94 (MQ=60)

 TGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGC                                                                                             <  SRR4302540.3955804/94‑1 (MQ=60)

  GTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCG                                                                                            <  SRR4302540.5647492/94‑1 (MQ=60)

  GTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCG                                                                                            >  SRR4302540.7133890/1‑94 (MQ=60)

   TGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGG                                                                                           <  SRR4302540.9918683/94‑1 (MQ=60)

   TCCGCGAGTATGTGCATAACGATGTCTATGTGAATAGCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACAGTCAGGTCTGCGG                                                                                           <  SRR4302540.9918684/94‑1 (MQ=60)

    GCGCGAGTATGTGCAGAACGATGTCTAAGTTAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGT                                                                                          <  SRR4302540.8099825/94‑1 (MQ=60)

     CGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTG                                                                                         <  SRR4302540.9894517/94‑1 (MQ=60)

     CGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTG                                                                                         >  SRR4302540.460672/1‑94 (MQ=60)

      GCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGG                                                                                        >  SRR4302540.5514215/1‑94 (MQ=60)

      GCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGG                                                                                        <  SRR4302540.1995637/94‑1 (MQ=60)

       CGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGT                                                                                       <  SRR4302540.5810578/94‑1 (MQ=60)

       CGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGT                                                                                       <  SRR4302540.2016502/94‑1 (MQ=60)

        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                      <  SRR4302540.1304821/94‑1 (MQ=60)

        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                      <  SRR4302540.5224471/94‑1 (MQ=60)

        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                      >  SRR4302540.3077282/1‑94 (MQ=60)

        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                      >  SRR4302540.3749650/1‑94 (MQ=60)

        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                      >  SRR4302540.4387621/1‑94 (MQ=60)

        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                      <  SRR4302540.1370537/94‑1 (MQ=60)

        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                      <  SRR4302540.2490702/94‑1 (MQ=60)

        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                      >  SRR4302540.8390662/1‑94 (MQ=60)

        GAGTATGTGCAGAACGATGACTATGTGAATAACCTGCAAGACAACTACTTCCAGCATCTGAGAAACGGCTTCTACGGTCAGGTGTGCGGTGGGT                                                                                      >  SRR4302540.7097012/1‑94 (MQ=60)

          GTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAT                                                                                    <  SRR4302540.9559618/94‑1 (MQ=60)

          GTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAT                                                                                    <  SRR4302540.9754104/94‑1 (MQ=60)

           TATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATC                                                                                   <  SRR4302540.1115710/94‑1 (MQ=60)

            ATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACTGCTTCTACGGTCAGGTCTGCGGTGGTTATCT                                                                                  >  SRR4302540.4973102/1‑94 (MQ=60)

            ATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCT                                                                                  <  SRR4302540.4584548/94‑1 (MQ=60)

            ATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCT                                                                                  <  SRR4302540.5230774/94‑1 (MQ=60)

             TGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTC                                                                                 >  SRR4302540.3608357/1‑94 (MQ=60)

             TGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTC                                                                                 <  SRR4302540.617868/94‑1 (MQ=60)

             TGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTC                                                                                 >  SRR4302540.2139239/1‑94 (MQ=60)

             TGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTC                                                                                 >  SRR4302540.7256785/1‑94 (MQ=60)

              GTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCG                                                                                <  SRR4302540.8574687/94‑1 (MQ=60)

               TGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGA                                                                               >  SRR4302540.2526008/1‑94 (MQ=60)

               TGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGA                                                                               >  SRR4302540.9221389/1‑94 (MQ=60)

               TGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGA                                                                               <  SRR4302540.9016379/94‑1 (MQ=60)

               TGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGCCCGGTCTGCGGTGGGTATCTCGA                                                                               >  SRR4302540.9164073/1‑94 (MQ=60)

                 CAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAA                                                                             >  SRR4302540.9952683/1‑94 (MQ=60)

                  AGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAAC                                                                            <  SRR4302540.3723359/94‑1 (MQ=60)

                   GAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACC                                                                           <  SRR4302540.6154215/94‑1 (MQ=60)

                    AACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGGGGGGGTTATCTCGAAACCT                                                                          >  SRR4302540.1204283/1‑94 (MQ=60)

                    AACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCA                                                                          <  SRR4302540.2023095/94‑1 (MQ=60)

                     ACGATGTGTATGTGAATAACATGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCAT                                                                         <  SRR4302540.2631853/94‑1 (MQ=60)

                     ACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCAT                                                                         <  SRR4302540.6488942/94‑1 (MQ=60)

                     ACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCAT                                                                         <  SRR4302540.9105603/94‑1 (MQ=60)

                     ACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCAT                                                                         <  SRR4302540.2631854/94‑1 (MQ=60)

                      CGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGCTGGTTATCTCGAAACCATG                                                                        >  SRR4302540.4987228/1‑94 (MQ=60)

                       GATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGT                                                                       >  SRR4302540.3182171/1‑94 (MQ=60)

                       GATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGT                                                                       >  SRR4302540.9610068/1‑94 (MQ=60)

                       GATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGT                                                                       >  SRR4302540.2142633/1‑94 (MQ=60)

                        ATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTT                                                                      <  SRR4302540.3334843/94‑1 (MQ=60)

                        ATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGGGGTTATCTCAAAAACATGTT                                                                      >  SRR4302540.824561/1‑94 (MQ=60)

                         TGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTT                                                                     <  SRR4302540.2422653/94‑1 (MQ=60)

                         TGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTT                                                                     <  SRR4302540.5829760/94‑1 (MQ=60)

                          GTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTG                                                                    <  SRR4302540.122591/94‑1 (MQ=60)

                          GTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTG                                                                    >  SRR4302540.7885254/1‑94 (MQ=60)

                          GTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTG                                                                    <  SRR4302540.4726455/94‑1 (MQ=60)

                           TCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGG                                                                   >  SRR4302540.3189520/1‑94 (MQ=60)

                             TATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCG                                                                 >  SRR4302540.7999826/1‑94 (MQ=60)

                             TATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCG                                                                 >  SRR4302540.7749127/1‑94 (MQ=60)

                              ATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCCTGTTTGGCGG                                                                >  SRR4302540.10038875/1‑94 (MQ=60)

                              ATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTTGCGG                                                                >  SRR4302540.8769593/1‑94 (MQ=60)

                              ATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGG                                                                <  SRR4302540.640758/94‑1 (MQ=60)

                              ATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGG                                                                <  SRR4302540.9853746/94‑1 (MQ=60)

                              ATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGG                                                                <  SRR4302540.2613234/94‑1 (MQ=60)

                               TGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGT                                                               <  SRR4302540.5102699/94‑1 (MQ=60)

                               TGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGT                                                               <  SRR4302540.316569/94‑1 (MQ=60)

                               TGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGT                                                               <  SRR4302540.1359407/94‑1 (MQ=60)

                               TGTGAATAACCTGCAAGCCAACTACTGCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGT                                                               <  SRR4302540.3057372/94‑1 (MQ=60)

                               TGTGAATAACCTGCAAGCAGAGTACTTCCAACACCTGGGCAACGGCTTATACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGT                                                               <  SRR4302540.5102698/94‑1 (MQ=60)

                               TGTGAATAACCTGAAAGCCAACTACTCCCAGCATCTGGCCAACGGGTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATCTTTGGCGGT                                                               <  SRR4302540.3260034/94‑1 (MQ=60)

                                TTGAATAACCTGCAAGGCACCTACTTACAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTG                                                              <  SRR4302540.1497626/94‑1 (MQ=60)

                                GTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTG                                                              <  SRR4302540.6679316/94‑1 (MQ=60)

                                GTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGGCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTG                                                              >  SRR4302540.9400385/1‑94 (MQ=60)

                                 TGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGC                                                             <  SRR4302540.3858847/94‑1 (MQ=60)

                                 TGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGC                                                             >  SRR4302540.7291780/1‑94 (MQ=60)

                                  GAATAACCTGCAAGCCAACTACTTCCAGCGTCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCG                                                            >  SRR4302540.9207557/1‑94 (MQ=60)

                                  GAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCCTGTTTGGCGGTGCG                                                            >  SRR4302540.2929286/1‑94 (MQ=60)

                                  GAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCG                                                            >  SRR4302540.2658528/1‑94 (MQ=60)

                                   AATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTTGTTATCTCGAAACCATGTTTGGCGGTGCGG                                                           >  SRR4302540.1770668/1‑94 (MQ=60)

                                   AATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGG                                                           <  SRR4302540.4563144/94‑1 (MQ=60)

                                   AATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGG                                                           >  SRR4302540.11468/1‑94 (MQ=60)

                                   AATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGG                                                           <  SRR4302540.5330999/94‑1 (MQ=60)

                                    ATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGG                                                          <  SRR4302540.2301765/94‑1 (MQ=60)

                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                         <  SRR4302540.5462087/94‑1 (MQ=60)

                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                         >  SRR4302540.6513544/1‑94 (MQ=60)

                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                         <  SRR4302540.1616776/94‑1 (MQ=60)

                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                         <  SRR4302540.9240997/94‑1 (MQ=60)

                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                         <  SRR4302540.3855356/94‑1 (MQ=60)

                                      AACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGG                                                        >  SRR4302540.7304986/1‑94 (MQ=60)

                                      AACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGG                                                        <  SRR4302540.7849429/94‑1 (MQ=60)

                                        CCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCA                                                      <  SRR4302540.1570613/94‑1 (MQ=60)

                                        CCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCA                                                      <  SRR4302540.601343/94‑1 (MQ=60)

                                        CCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCA                                                      <  SRR4302540.1268633/94‑1 (MQ=60)

                                         CTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGGGGTTATTTCGAAACCATGTTTGGCGGGGCGGGGGgga                                                     >  SRR4302540.936612/1‑91 (MQ=60)

                                          TGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGA                                                    >  SRR4302540.8865985/1‑94 (MQ=60)

                                            CAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAG                                                  <  SRR4302540.7253084/94‑1 (MQ=60)

                                            CAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAG                                                  >  SRR4302540.2994308/1‑94 (MQ=60)

                                             AAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGT                                                 <  SRR4302540.2784819/94‑1 (MQ=60)

                                             AAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGG                                                 >  SRR4302540.1030759/1‑94 (MQ=60)

                                              AGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTG                                                >  SRR4302540.7636214/1‑94 (MQ=60)

                                              AGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTG                                                >  SRR4302540.7636216/1‑94 (MQ=60)

                                               GCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGT                                               <  SRR4302540.1618030/94‑1 (MQ=60)

                                                gcatgtcctccgagaatcgtGGCAACGCCTTCTACGGTCAGGTCTACCGTGGTTATCTGGAAAACATGGTTGGCGGTGCGGGGGAAGAAGTGTT                                              <  SRR4302540.506775/74‑1 (MQ=52)

                                                CCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTT                                              >  SRR4302540.9168791/1‑94 (MQ=60)

                                                CCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTT                                              >  SRR4302540.5747030/1‑94 (MQ=60)

                                                CCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTT                                              >  SRR4302540.7703352/1‑94 (MQ=60)

                                                 CAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTG                                             >  SRR4302540.9600792/1‑94 (MQ=60)

                                                  AACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGT                                            >  SRR4302540.1754509/1‑94 (MQ=60)

                                                  AACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGT                                            >  SRR4302540.5439163/1‑94 (MQ=60)

                                                   ACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAGGTGTTGTA                                           >  SRR4302540.3038578/1‑94 (MQ=60)

                                                   ACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTA                                           <  SRR4302540.8558009/94‑1 (MQ=60)

                                                   ACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTA                                           <  SRR4302540.6662665/94‑1 (MQ=60)

                                                    CTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTAT                                          <  SRR4302540.3330934/94‑1 (MQ=60)

                                                     TACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATC                                         >  SRR4302540.9432055/1‑94 (MQ=60)

                                                     TACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATC                                         <  SRR4302540.7421012/94‑1 (MQ=60)

                                                     TACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATC                                         <  SRR4302540.1488025/94‑1 (MQ=60)

                                                      ACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCG                                        <  SRR4302540.8553313/94‑1 (MQ=60)

                                                      ACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGGCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCG                                        >  SRR4302540.7294805/1‑94 (MQ=60)

                                                       CTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGC                                       >  SRR4302540.1092145/1‑94 (MQ=60)

                                                       CTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGC                                       >  SRR4302540.5498972/1‑94 (MQ=60)

                                                         TCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCC                                     <  SRR4302540.933274/94‑1 (MQ=60)

                                                          CCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCG                                    >  SRR4302540.7796176/1‑94 (MQ=60)

                                                          CCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCG                                    <  SRR4302540.4068758/94‑1 (MQ=60)

                                                          CCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCG                                    >  SRR4302540.4242600/1‑94 (MQ=60)

                                                          CCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCC                                    >  SRR4302540.7201409/1‑94 (MQ=60)

                                                           CAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGC                                   >  SRR4302540.5158562/1‑94 (MQ=60)

                                                           CAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGC                                   <  SRR4302540.787086/94‑1 (MQ=60)

                                                           CAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGC                                   >  SRR4302540.1394485/1‑94 (MQ=60)

                                                            AGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCT                                  >  SRR4302540.1058716/1‑94 (MQ=60)

                                                            AGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGT‑GTTATCTCGAAACCATATTTGGCGGTGGAGGGGGCGAAGTGTTTTATCGCCCCCTG                                 >  SRR4302540.5958723/1‑94 (MQ=50)

                                                              GATCTGGGCAACGGCGTCGACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGCGTTGTATCGCCCGCTGG                                <  SRR4302540.7254889/94‑1 (MQ=60)

                                                              CATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGG                                >  SRR4302540.8536171/1‑94 (MQ=60)

                                                              CATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGG                                >  SRR4302540.533633/1‑94 (MQ=60)

                                                              CATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGG                                >  SRR4302540.3907501/1‑94 (MQ=60)

                                                               ATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAGCCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGA                               <  SRR4302540.53135/94‑1 (MQ=60)

                                                                TCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGAC                              <  SRR4302540.2380298/94‑1 (MQ=60)

                                                                TCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGAC                              <  SRR4302540.5948111/94‑1 (MQ=60)

                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCTGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                             <  SRR4302540.1922736/94‑1 (MQ=60)

                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                             >  SRR4302540.1745240/1‑94 (MQ=60)

                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                             <  SRR4302540.1178438/94‑1 (MQ=60)

                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                             >  SRR4302540.5853805/1‑94 (MQ=60)

                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                             >  SRR4302540.5874918/1‑94 (MQ=60)

                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                             >  SRR4302540.5874919/1‑94 (MQ=60)

                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                             <  SRR4302540.1922452/94‑1 (MQ=60)

                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                             <  SRR4302540.1050654/94‑1 (MQ=60)

                                                                  TGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCCGAAGTGTTGTATCGCCCGCTGGACAG                            >  SRR4302540.1934272/1‑94 (MQ=60)

                                                                   GGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGC                           >  SRR4302540.527200/1‑94 (MQ=60)

                                                                    GGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCA                          >  SRR4302540.4129104/1‑94 (MQ=60)

                                                                     GCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAA                         <  SRR4302540.6715604/94‑1 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       >  SRR4302540.2132815/1‑94 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       <  SRR4302540.3908824/94‑1 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       <  SRR4302540.9459396/94‑1 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       <  SRR4302540.9687787/94‑1 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       <  SRR4302540.5631574/94‑1 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       <  SRR4302540.932050/94‑1 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       >  SRR4302540.5069021/1‑94 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       >  SRR4302540.5203865/1‑94 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       <  SRR4302540.1538264/94‑1 (MQ=60)

                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                       <  SRR4302540.7916476/94‑1 (MQ=60)

                                                                        ACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTG                      >  SRR4302540.4069598/1‑94 (MQ=60)

                                                                         CGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGG                     <  SRR4302540.5459106/94‑1 (MQ=60)

                                                                          GGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGG                    >  SRR4302540.2841072/1‑94 (MQ=60)

                                                                          GGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGG                    >  SRR4302540.605554/1‑94 (MQ=60)

                                                                           GCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGC                   >  SRR4302540.9361918/1‑94 (MQ=60)

                                                                            CTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCG                  <  SRR4302540.1277619/94‑1 (MQ=60)

                                                                            CTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCG                  <  SRR4302540.1277620/94‑1 (MQ=60)

                                                                             TTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGT                 >  SRR4302540.2646826/1‑94 (MQ=60)

                                                                             TTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGT                 >  SRR4302540.6620283/1‑94 (MQ=60)

                                                                             TTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGT                 <  SRR4302540.4801733/94‑1 (MQ=60)

                                                                             TTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGT                 >  SRR4302540.9574138/1‑94 (MQ=60)

                                                                              TCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTT                <  SRR4302540.4762780/94‑1 (MQ=60)

                                                                                TACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTG              >  SRR4302540.1599997/1‑94 (MQ=60)

                                                                                TACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTG              <  SRR4302540.3719426/94‑1 (MQ=60)

                                                                                TACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTG              >  SRR4302540.7125082/1‑94 (MQ=60)

                                                                                 ACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGG             <  SRR4302540.905710/94‑1 (MQ=60)

                                                                                 ACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGG             <  SRR4302540.8739237/94‑1 (MQ=60)

                                                                                 ACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGG             <  SRR4302540.7987425/94‑1 (MQ=60)

                                                                                  CGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGT            >  SRR4302540.2045453/1‑94 (MQ=60)

                                                                                  CGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGCGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGT            >  SRR4302540.6220829/1‑94 (MQ=60)

                                                                                   GGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTC           >  SRR4302540.1090205/1‑94 (MQ=60)

                                                                                   GGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTC           >  SRR4302540.3969163/1‑94 (MQ=60)

                                                                                   GGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTC           <  SRR4302540.2766009/94‑1 (MQ=60)

                                                                                    GTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCT          <  SRR4302540.134502/94‑1 (MQ=60)

                                                                                    GTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCT          <  SRR4302540.808797/94‑1 (MQ=60)

                                                                                      CAGGTCGTCGGTGGTTAGCTCGAAACCATGTTTGGCTGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGG        <  SRR4302540.8468738/94‑1 (MQ=60)

                                                                                       AGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGA       <  SRR4302540.8846030/94‑1 (MQ=60)

                                                                                       AGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGA       <  SRR4302540.1639490/94‑1 (MQ=60)

                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT      <  SRR4302540.1902130/94‑1 (MQ=60)

                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT      <  SRR4302540.3202781/94‑1 (MQ=60)

                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT      <  SRR4302540.7567029/94‑1 (MQ=60)

                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT      <  SRR4302540.9319255/94‑1 (MQ=60)

                                                                                         GTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATG     <  SRR4302540.9978547/94‑1 (MQ=60)

                                                                                         GTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATG     <  SRR4302540.2922414/94‑1 (MQ=60)

                                                                                           CTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCC   >  SRR4302540.3260052/1‑94 (MQ=60)

                                                                                           CTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCC   >  SRR4302540.10072868/1‑94 (MQ=60)

                                                                                            TGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCA  <  SRR4302540.4192623/94‑1 (MQ=60)

ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCA  >  NC_000913/4236693‑4236878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`