Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,259,162 A→G intergenic (+277/‑86) yjbM → / → yjbN hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,259,1620AG99.8% 1837.0 / ‑5.7 557intergenic (+277/‑86)yjbM/yjbNhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (272/283);  total (273/284)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01

Only 100 of 622 total aligned reads displayed.

TTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATAGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATGC  >  NC_000913/4259072‑4259251
                                                                                          |                                                                                         
ttattTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTatggtatggt                                                                                         <  2:7498381/93‑1 (MQ=255)
 tattTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTAtggtatggta                                                                                        <  2:4179973/93‑1 (MQ=255)
 tattTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTAtggtatggta                                                                                        >  1:9411735/1‑93 (MQ=255)
 tattTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTAtggtatggta                                                                                        >  2:3724130/1‑93 (MQ=255)
 tattTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTAtggtatggta                                                                                        <  2:5993622/93‑1 (MQ=255)
 tattTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATAGTa                                                                                        >  1:6154892/1‑93 (MQ=255)
  attTCCATCCCTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTAc                                                                                       <  2:202354/93‑1 (MQ=255)
    ttCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTAccc                                                                                     <  1:7352416/93‑1 (MQ=255)
     tCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTAcccc                                                                                    >  2:2564534/1‑93 (MQ=255)
      ccATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCg                                                                                   <  2:7600513/93‑1 (MQ=255)
       cATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGc                                                                                  >  1:7906352/1‑93 (MQ=255)
       cATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGc                                                                                  >  1:7495133/1‑93 (MQ=255)
       cATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCAGc                                                                                  >  2:928179/1‑93 (MQ=255)
         tCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTa                                                                                >  1:2410537/1‑93 (MQ=255)
         tCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTa                                                                                >  2:7987645/1‑93 (MQ=255)
          cACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTAt                                                                               >  2:347525/1‑93 (MQ=255)
           aCTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTAtt                                                                              <  1:2140505/93‑1 (MQ=255)
            cTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTg                                                                             <  1:5173442/93‑1 (MQ=255)
            cTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTg                                                                             >  2:3117371/1‑93 (MQ=255)
            cTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTg                                                                             <  1:1800306/93‑1 (MQ=255)
             ttCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGa                                                                            <  2:8681584/93‑1 (MQ=255)
                gTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGcc                                                                         >  2:2819499/1‑93 (MQ=255)
                 tGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGcct                                                                        >  1:3557685/1‑93 (MQ=255)
                   agagCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGcctcc                                                                      >  2:6802089/1‑93 (MQ=255)
                    gagCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGcctcct                                                                     >  1:6531873/1‑93 (MQ=255)
                     agCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTg                                                                    <  2:1001694/93‑1 (MQ=255)
                     agCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTg                                                                    >  2:2710281/1‑93 (MQ=255)
                      gCTTCATGCCTTGAGAGGATTTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTTCCCCGCTATTGAGCCTCCTGa                                                                   <  2:2267036/93‑1 (MQ=255)
                       cTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGaa                                                                  <  1:10016118/93‑1 (MQ=255)
                          cATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAg                                                               >  2:3034664/1‑93 (MQ=255)
                            tGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTg                                                             >  1:9770073/1‑93 (MQ=255)
                             gCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGa                                                            <  1:3294896/93‑1 (MQ=255)
                                ttGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGc                                                         >  2:8606997/1‑93 (MQ=255)
                                  gagaGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTg                                                       >  1:2864345/1‑93 (MQ=255)
                                  gagaGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTg                                                       >  1:7411870/1‑93 (MQ=255)
                                   agagGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGa                                                      >  1:1672845/1‑93 (MQ=255)
                                   agagGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGa                                                      <  1:7612898/93‑1 (MQ=255)
                                       gATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataa                                                  <  2:6906168/93‑1 (MQ=255)
                                       gATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataa                                                  >  2:9575590/1‑93 (MQ=255)
                                       gATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataa                                                  >  1:3689484/1‑93 (MQ=255)
                                        aTCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataac                                                 >  1:4241718/1‑93 (MQ=255)
                                        aTCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataac                                                 <  1:1967978/93‑1 (MQ=255)
                                         tctcAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataaca                                                >  1:4498043/1‑93 (MQ=255)
                                         tctcAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataaca                                                >  2:669562/1‑93 (MQ=255)
                                         tctcAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGACTCCTGAATAGTGATGCTGAataaca                                                >  1:137539/1‑93 (MQ=255)
                                          ctcAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataacat                                               <  2:829373/93‑1 (MQ=255)
                                          ctcAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataacat                                               >  2:4728837/1‑93 (MQ=255)
                                           tcAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataacata                                              >  2:8760380/1‑93 (MQ=255)
                                           tcAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataacata                                              <  2:9115890/93‑1 (MQ=255)
                                            cAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataacataa                                             <  2:5749707/93‑1 (MQ=255)
                                              aTTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAcc                                           <  1:8696082/93‑1 (MQ=255)
                                               ttttCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAataacataacgc                                          >  2:9762145/1‑91 (MQ=255)
                                               ttttCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAccc                                          <  1:6014090/93‑1 (MQ=255)
                                               ttttCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAccc                                          >  1:8909895/1‑93 (MQ=255)
                                                tttCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAcccc                                         >  2:8095479/1‑93 (MQ=255)
                                                tttCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAcccc                                         <  1:9614851/93‑1 (MQ=255)
                                                  tCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCAt                                       >  1:4091169/1‑93 (MQ=255)
                                                  tCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCAt                                       <  2:4890729/93‑1 (MQ=255)
                                                  tCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCAt                                       >  1:5697060/1‑93 (MQ=255)
                                                     tttGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGat                                    <  2:8478679/93‑1 (MQ=255)
                                                     tttGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGat                                    <  2:7906200/93‑1 (MQ=255)
                                                      ttGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGata                                   <  2:7175269/93‑1 (MQ=255)
                                                       tGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGatat                                  <  1:9152473/93‑1 (MQ=255)
                                                       tGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGatat                                  <  1:2347119/93‑1 (MQ=255)
                                                       tGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGatat                                  >  2:1661567/1‑93 (MQ=255)
                                                         cAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGatatat                                <  2:4118357/93‑1 (MQ=255)
                                                          aaTGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATc                               >  1:2234823/1‑93 (MQ=255)
                                                          aaTGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATc                               <  1:4975894/93‑1 (MQ=255)
                                                           aTGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCg                              >  1:3896527/1‑93 (MQ=255)
                                                           aTGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCg                              >  2:3918793/1‑93 (MQ=255)
                                                            tGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGa                             >  2:6970733/1‑93 (MQ=255)
                                                             gagaCAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCTATGATATATCGAt                            >  2:1086499/1‑93 (MQ=255)
                                                              agaCAGGCACTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATa                           <  2:4336867/93‑1 (MQ=255)
                                                                aCAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATaaa                         <  1:6447532/93‑1 (MQ=255)
                                                                 cAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCACATGATATATCGATaaaa                        <  2:6332334/93‑1 (MQ=255)
                                                                  aGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAaat                       <  1:8524021/93‑1 (MQ=255)
                                                                   ggCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAaata                      >  1:4684697/1‑93 (MQ=255)
                                                                   ggCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAaata                      <  1:5443620/93‑1 (MQ=255)
                                                                   ggCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAaata                      >  1:1169386/1‑93 (MQ=255)
                                                                    gcgcTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAaataa                     <  1:5472533/93‑1 (MQ=255)
                                                                    gcgcTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAaataa                     <  1:31251/93‑1 (MQ=255)
                                                                     cgcTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAaataat                    <  2:5183760/93‑1 (MQ=255)
                                                                      gcTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAAtc                   >  1:6695487/1‑93 (MQ=255)
                                                                        ttCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAAtctc                 >  1:8163486/1‑93 (MQ=255)
                                                                        ttCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAAgctc                 <  2:5223717/93‑1 (MQ=255)
                                                                         tCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATctct                <  2:1494597/93‑1 (MQ=255)
                                                                         tCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATctct                <  2:5532425/93‑1 (MQ=255)
                                                                         tCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATctct                <  2:7802810/93‑1 (MQ=255)
                                                                         tCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATctct                >  2:3277592/1‑93 (MQ=255)
                                                                          ccTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTa               >  1:581706/1‑93 (MQ=255)
                                                                             gttgttATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACAt            >  2:4650446/1‑93 (MQ=255)
                                                                              ttgttATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACAtt           >  2:7309053/1‑93 (MQ=255)
                                                                                gttATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTg         >  1:7017942/1‑93 (MQ=255)
                                                                                 ttATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGa        >  1:435713/1‑93 (MQ=255)
                                                                                 ttATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGa        >  1:7149066/1‑93 (MQ=255)
                                                                                  tatggtatggTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGaa       >  2:5045678/1‑93 (MQ=255)
                                                                                   atggtatggtACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGaaa      >  1:8404408/1‑93 (MQ=255)
                                                                                    tggtatggtaCCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGaaaa     <  1:2774163/93‑1 (MQ=255)
                                                                                     ggTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAAt    >  1:6237692/1‑93 (MQ=255)
                                                                                       tatgGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATGc  <  1:5570696/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATAGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATGC  >  NC_000913/4259072‑4259251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 337 total aligned reads displayed.
AGATTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATAGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATGCACGG  >  NC_000913/4259069‑4259255
                                                                                             |                                                                                             
AGATTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATG                                                                                               <  SRR4302540.3125254/94‑1 (MQ=60)
AGATTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATG                                                                                               <  SRR4302540.2332670/94‑1 (MQ=60)
AGATTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATG                                                                                               <  SRR4302540.1673622/94‑1 (MQ=60)
 GATTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGG                                                                                              >  SRR4302540.6980294/1‑94 (MQ=60)
   TTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGCGACAGGCGCTTCCTGTTGTTTTGGTATGGTA                                                                                            >  SRR4302540.3353770/1‑94 (MQ=60)
   TTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTA                                                                                            <  SRR4302540.3035528/94‑1 (MQ=60)
   TTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTA                                                                                            >  SRR4302540.9600626/1‑94 (MQ=60)
   TTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTA                                                                                            >  SRR4302540.9523640/1‑94 (MQ=60)
    TATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTAC                                                                                           <  SRR4302540.206624/94‑1 (MQ=60)
     ATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACC                                                                                          >  SRR4302540.6427700/1‑94 (MQ=60)
      TTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCC                                                                                         <  SRR4302540.6467019/94‑1 (MQ=60)
       TTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCC                                                                                        >  SRR4302540.6866267/1‑94 (MQ=60)
       TTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCC                                                                                        >  SRR4302540.849387/1‑94 (MQ=60)
       TTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCC                                                                                        <  SRR4302540.7434424/94‑1 (MQ=60)
       TTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCC                                                                                        >  SRR4302540.5509428/1‑94 (MQ=60)
        TCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCG                                                                                       >  SRR4302540.6899774/1‑94 (MQ=60)
        TCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCG                                                                                       <  SRR4302540.7340169/94‑1 (MQ=60)
         CCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGC                                                                                      >  SRR4302540.10035788/1‑94 (MQ=60)
         CCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGC                                                                                      >  SRR4302540.7998558/1‑94 (MQ=60)
         CCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGC                                                                                      >  SRR4302540.7578848/1‑94 (MQ=60)
         CCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGC                                                                                      <  SRR4302540.5470699/94‑1 (MQ=60)
          CCTCACTTCTGGAGAGCTTCATGCCTTGAGAGTGTCGCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCT                                                                                     <  SRR4302540.3770527/94‑1 (MQ=60)
          CATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCT                                                                                     <  SRR4302540.1369807/94‑1 (MQ=60)
          CATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCT                                                                                     <  SRR4302540.5767373/94‑1 (MQ=60)
          CATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCT                                                                                     >  SRR4302540.432707/1‑94 (MQ=60)
          CATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCT                                                                                     >  SRR4302540.7502304/1‑94 (MQ=60)
            TCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTAT                                                                                   >  SRR4302540.9204694/1‑94 (MQ=60)
             CACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATT                                                                                  <  SRR4302540.3225361/94‑1 (MQ=60)
              ACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTG                                                                                 <  SRR4302540.8368928/94‑1 (MQ=60)
               CTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGA                                                                                <  SRR4302540.5229750/94‑1 (MQ=60)
               CTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGA                                                                                >  SRR4302540.346703/1‑94 (MQ=60)
               CTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGA                                                                                <  SRR4302540.1819901/94‑1 (MQ=60)
               CTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGA                                                                                >  SRR4302540.5777333/1‑94 (MQ=60)
                TTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAG                                                                               <  SRR4302540.5721978/94‑1 (MQ=60)
                TTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAG                                                                               <  SRR4302540.3944260/94‑1 (MQ=60)
                  CGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCC                                                                             >  SRR4302540.1839158/1‑94 (MQ=60)
                   GTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCT                                                                            >  SRR4302540.8845757/1‑94 (MQ=60)
                   GTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCT                                                                            >  SRR4302540.4125444/1‑94 (MQ=60)
                   GTGAGAGCTTCATGCCTTGACAGGATCTCCATTTTCTTTTGCACTGAGAAAGGCGCTTCCTGTTGTTATGGTCTGGTACCCCGCTATTGAGGCT                                                                            >  SRR4302540.457294/1‑94 (MQ=60)
                    TGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTC                                                                           >  SRR4302540.1638991/1‑94 (MQ=60)
                     GAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCC                                                                          >  SRR4302540.3046954/1‑94 (MQ=60)
                      AGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCT                                                                         >  SRR4302540.6604391/1‑94 (MQ=60)
                       GAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTG                                                                        <  SRR4302540.4623713/94‑1 (MQ=60)
                        AGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGA                                                                       >  SRR4302540.5304954/1‑94 (MQ=60)
                          CTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAAT                                                                     <  SRR4302540.10132709/94‑1 (MQ=60)
                          CTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAAT                                                                     <  SRR4302540.7118566/94‑1 (MQ=60)
                          CTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAAT                                                                     >  SRR4302540.7276301/1‑94 (MQ=60)
                            TCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAG                                                                   <  SRR4302540.1703520/94‑1 (MQ=60)
                            TCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAG                                                                   <  SRR4302540.4746096/94‑1 (MQ=60)
                            TCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAG                                                                   >  SRR4302540.802653/1‑94 (MQ=60)
                            TCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAG                                                                   <  SRR4302540.5171857/94‑1 (MQ=60)
                              ATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTG                                                                 >  SRR4302540.2765148/1‑94 (MQ=60)
                              ATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTG                                                                 <  SRR4302540.5312721/94‑1 (MQ=60)
                              ATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTG                                                                 >  SRR4302540.2122473/1‑94 (MQ=60)
                              ATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTG                                                                 <  SRR4302540.36704/94‑1 (MQ=60)
                               TGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGA                                                                >  SRR4302540.6234222/1‑94 (MQ=60)
                               TGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCCGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGA                                                                >  SRR4302540.5995506/1‑94 (MQ=60)
                                GCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGAT                                                               <  SRR4302540.5163689/94‑1 (MQ=60)
                                GCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGAT                                                               <  SRR4302540.4158887/94‑1 (MQ=60)
                                GCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGAT                                                               <  SRR4302540.314924/94‑1 (MQ=60)
                                   TTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCT                                                            >  SRR4302540.4046778/1‑94 (MQ=60)
                                    TGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTG                                                           >  SRR4302540.6812460/1‑94 (MQ=60)
                                    TGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTG                                                           >  SRR4302540.2673995/1‑94 (MQ=60)
                                    TGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTG                                                           >  SRR4302540.2895418/1‑94 (MQ=60)
                                    TGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATCGAGCCTCCTGAATAGTGATGCTG                                                           >  SRR4302540.8229341/1‑94 (MQ=60)
                                     GAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGA                                                          <  SRR4302540.2389845/94‑1 (MQ=60)
                                     GAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGA                                                          >  SRR4302540.1967732/1‑94 (MQ=60)
                                      AGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAA                                                         >  SRR4302540.2189078/1‑94 (MQ=60)
                                      AGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAA                                                         <  SRR4302540.2405360/94‑1 (MQ=60)
                                      AGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAA                                                         <  SRR4302540.1692422/94‑1 (MQ=60)
                                      AGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAA                                                         <  SRR4302540.7698467/94‑1 (MQ=60)
                                      AGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAA                                                         <  SRR4302540.3257935/94‑1 (MQ=60)
                                       GAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAAT                                                        >  SRR4302540.430884/1‑94 (MQ=60)
                                       GAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAAT                                                        >  SRR4302540.9837457/1‑94 (MQ=60)
                                        AGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATA                                                       >  SRR4302540.7872153/1‑94 (MQ=60)
                                        AGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATA                                                       >  SRR4302540.4908839/1‑94 (MQ=60)
                                        AGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATA                                                       <  SRR4302540.587065/94‑1 (MQ=60)
                                         GGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAA                                                      >  SRR4302540.3729787/1‑94 (MQ=60)
                                         GGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAA                                                      >  SRR4302540.5513870/1‑94 (MQ=60)
                                          GATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAAC                                                     >  SRR4302540.1849842/1‑94 (MQ=60)
                                          GATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAAC                                                     >  SRR4302540.4287867/1‑94 (MQ=60)
                                           ATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACA                                                    <  SRR4302540.1989351/94‑1 (MQ=60)
                                           ATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACA                                                    <  SRR4302540.6684009/94‑1 (MQ=60)
                                           ATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACA                                                    <  SRR4302540.9774828/94‑1 (MQ=60)
                                           ATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACA                                                    >  SRR4302540.4546808/1‑94 (MQ=60)
                                           ATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACA                                                    >  SRR4302540.3602451/1‑94 (MQ=60)
                                           ATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACA                                                    >  SRR4302540.8760929/1‑94 (MQ=60)
                                           ATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGACTCCTGAATAGTGATGCTGAATAACA                                                    >  SRR4302540.138978/1‑94 (MQ=60)
                                             CTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATA                                                  >  SRR4302540.2565130/1‑94 (MQ=60)
                                             CTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATA                                                  >  SRR4302540.7457938/1‑94 (MQ=60)
                                               TAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAC                                                <  SRR4302540.6523861/94‑1 (MQ=60)
                                               CAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATACAATAAC                                                >  SRR4302540.8602265/1‑94 (MQ=60)
                                               CAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAC                                                >  SRR4302540.10059805/1‑94 (MQ=60)
                                               CAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAC                                                >  SRR4302540.3512643/1‑94 (MQ=60)
                                               CAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAAC                                                <  SRR4302540.8193439/94‑1 (MQ=60)
                                                AATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATTCTGAATAACATAACC                                               >  SRR4302540.9098215/1‑94 (MQ=60)
                                                AATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAAGATACCC                                               >  SRR4302540.253508/1‑94 (MQ=60)
                                                AATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACC                                               <  SRR4302540.8799877/94‑1 (MQ=60)
                                                AATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACC                                               <  SRR4302540.3762389/94‑1 (MQ=60)
                                                AATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACC                                               <  SRR4302540.3870819/94‑1 (MQ=60)
                                                AATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACC                                               >  SRR4302540.9557372/1‑94 (MQ=60)
                                                AATTGTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACC                                               <  SRR4302540.6240640/94‑1 (MQ=60)
                                                 ATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCC                                              <  SRR4302540.8797032/94‑1 (MQ=60)
                                                 ATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCC                                              >  SRR4302540.7155330/1‑94 (MQ=60)
                                                 ATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGCTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCC                                              <  SRR4302540.1421595/94‑1 (MQ=60)
                                                  TTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCC                                             <  SRR4302540.6080782/94‑1 (MQ=60)
                                                  TTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCC                                             >  SRR4302540.6476284/1‑94 (MQ=60)
                                                   TTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCA                                            <  SRR4302540.7764918/94‑1 (MQ=60)
                                                   TTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCA                                            <  SRR4302540.8313880/94‑1 (MQ=60)
                                                   TTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCA                                            <  SRR4302540.4606512/94‑1 (MQ=60)
                                                    TTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCAT                                           >  SRR4302540.4135306/1‑94 (MQ=60)
                                                    TTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCAT                                           <  SRR4302540.2836791/94‑1 (MQ=60)
                                                    TTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCAT                                           <  SRR4302540.7596569/94‑1 (MQ=60)
                                                    TTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCAT                                           <  SRR4302540.5114093/94‑1 (MQ=60)
                                                     TCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATG                                          <  SRR4302540.2819333/94‑1 (MQ=60)
                                                     TCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATG                                          <  SRR4302540.2197076/94‑1 (MQ=60)
                                                     TCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATG                                          <  SRR4302540.7243935/94‑1 (MQ=60)
                                                     TCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATG                                          >  SRR4302540.1068440/1‑94 (MQ=60)
                                                     TCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATG                                          <  SRR4302540.8713811/94‑1 (MQ=60)
                                                      CTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGA                                         >  SRR4302540.9483219/1‑94 (MQ=60)
                                                       TTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGAT                                        <  SRR4302540.9971567/94‑1 (MQ=60)
                                                        TTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATA                                       >  SRR4302540.4488477/1‑94 (MQ=60)
                                                        TTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATA                                       <  SRR4302540.6394399/94‑1 (MQ=60)
                                                        TTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATA                                       <  SRR4302540.6150593/94‑1 (MQ=60)
                                                         TTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATAT                                      <  SRR4302540.6732854/94‑1 (MQ=60)
                                                          TGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATA                                     <  SRR4302540.2372402/94‑1 (MQ=60)
                                                          TGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATA                                     <  SRR4302540.9262362/94‑1 (MQ=60)
                                                           GCAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATAT                                    >  SRR4302540.9672753/1‑94 (MQ=60)
                                                            CAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATC                                   >  SRR4302540.2258869/1‑94 (MQ=60)
                                                            CAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATC                                   <  SRR4302540.1624324/94‑1 (MQ=60)
                                                            CAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATC                                   >  SRR4302540.5624604/1‑94 (MQ=60)
                                                            CAATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATC                                   >  SRR4302540.8901620/1‑94 (MQ=60)
                                                             AATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCG                                  <  SRR4302540.5029747/94‑1 (MQ=60)
                                                             AATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCG                                  >  SRR4302540.3938812/1‑94 (MQ=60)
                                                             AATGAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCG                                  >  SRR4302540.7695421/1‑94 (MQ=60)
                                                               TGAGACAGGCGCTTCCTGTTGTTATGGTCTGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGAT                                <  SRR4302540.9040857/94‑1 (MQ=60)
                                                                GAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATA                               <  SRR4302540.6138935/94‑1 (MQ=60)
                                                                GAGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATA                               >  SRR4302540.4359725/1‑94 (MQ=60)
                                                                GAGACAGGCGCTGCTCTTTGTTATGGTATGTGACCCCGCTATTGAGCCTCCTTAATAGTGATGCTGAATAACATAACCCCATGATATATCGATA                               <  SRR4302540.1140044/94‑1 (MQ=60)
                                                                 AGACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAA                              <  SRR4302540.2385956/94‑1 (MQ=60)
                                                                  GACAGGCGTTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAA                             <  SRR4302540.8887519/94‑1 (MQ=60)
                                                                  GACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAA                             <  SRR4302540.3695085/94‑1 (MQ=60)
                                                                  GACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAA                             >  SRR4302540.7514590/1‑94 (MQ=60)
                                                                  GACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAA                             >  SRR4302540.8380427/1‑94 (MQ=60)
                                                                  GACAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAA                             >  SRR4302540.985708/1‑94 (MQ=60)
                                                                    CAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAAT                           >  SRR4302540.7106750/1‑94 (MQ=60)
                                                                    CAGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAAT                           >  SRR4302540.8495015/1‑94 (MQ=60)
                                                                     AGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATA                          <  SRR4302540.8623069/94‑1 (MQ=60)
                                                                     AGGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATA                          <  SRR4302540.6761939/94‑1 (MQ=60)
                                                                      GGCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAA                         <  SRR4302540.9271354/94‑1 (MQ=60)
                                                                       GCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAAT                        <  SRR4302540.5532767/94‑1 (MQ=60)
                                                                       GCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAAT                        <  SRR4302540.5532772/94‑1 (MQ=60)
                                                                       GCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAAT                        >  SRR4302540.2754580/1‑94 (MQ=60)
                                                                       GCGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAAT                        <  SRR4302540.31578/94‑1 (MQ=60)
                                                                        CGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATC                       <  SRR4302540.22711/94‑1 (MQ=60)
                                                                        CGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATC                       <  SRR4302540.22709/94‑1 (MQ=60)
                                                                        CGCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATC                       <  SRR4302540.5829890/94‑1 (MQ=60)
                                                                         GCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCT                      >  SRR4302540.8621530/1‑94 (MQ=60)
                                                                         GCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCT                      <  SRR4302540.1764384/94‑1 (MQ=60)
                                                                         GCTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCT                      >  SRR4302540.1113743/1‑94 (MQ=60)
                                                                          CTTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTC                     >  SRR4302540.7827561/1‑94 (MQ=60)
                                                                           TTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCT                    >  SRR4302540.65784/1‑94 (MQ=60)
                                                                           TTCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCT                    >  SRR4302540.5716753/1‑94 (MQ=60)
                                                                            TCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTA                   >  SRR4302540.6602502/1‑94 (MQ=60)
                                                                            TCCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTA                   <  SRR4302540.7457448/94‑1 (MQ=60)
                                                                             CCTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTAC                  <  SRR4302540.6203815/94‑1 (MQ=60)
                                                                              CTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACA                 <  SRR4302540.1233600/94‑1 (MQ=60)
                                                                              CTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACA                 >  SRR4302540.7489646/1‑94 (MQ=60)
                                                                              CTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACA                 >  SRR4302540.3541785/1‑94 (MQ=60)
                                                                              CTGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACA                 <  SRR4302540.3288855/94‑1 (MQ=60)
                                                                               TGTTGTTATGGTATTGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACAT                <  SRR4302540.7497448/94‑1 (MQ=60)
                                                                               TGTTGTTATGGTATGTTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACAT                <  SRR4302540.438134/94‑1 (MQ=60)
                                                                               TGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATGTATCGATAAAATAATCTCTACAT                <  SRR4302540.1200122/94‑1 (MQ=60)
                                                                               TGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACAT                <  SRR4302540.590103/94‑1 (MQ=60)
                                                                               TGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACAT                <  SRR4302540.7674369/94‑1 (MQ=60)
                                                                               TGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACAT                <  SRR4302540.5566384/94‑1 (MQ=60)
                                                                               TGTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACAT                <  SRR4302540.5566657/94‑1 (MQ=60)
                                                                                GTTGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATT               <  SRR4302540.7377935/94‑1 (MQ=60)
                                                                                  TGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTG             <  SRR4302540.5644555/94‑1 (MQ=60)
                                                                                  TGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTG             <  SRR4302540.4683660/94‑1 (MQ=60)
                                                                                  TGTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTG             >  SRR4302540.7095882/1‑94 (MQ=60)
                                                                                   GTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGA            <  SRR4302540.2236919/94‑1 (MQ=60)
                                                                                   GTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGA            >  SRR4302540.1989320/1‑94 (MQ=60)
                                                                                   GTTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGA            >  SRR4302540.440331/1‑94 (MQ=60)
                                                                                    TTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAA           >  SRR4302540.6281678/1‑94 (MQ=60)
                                                                                    TTATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAA           <  SRR4302540.2113474/94‑1 (MQ=60)
                                                                                     TATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAA          >  SRR4302540.4195665/1‑94 (MQ=60)
                                                                                     TATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAA          >  SRR4302540.8501959/1‑94 (MQ=60)
                                                                                      ATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAA         >  SRR4302540.9813012/1‑94 (MQ=60)
                                                                                      ATGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAA         <  SRR4302540.6002079/94‑1 (MQ=60)
                                                                                       TGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAAT        <  SRR4302540.6861256/94‑1 (MQ=60)
                                                                                       TGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAAT        <  SRR4302540.4988017/94‑1 (MQ=60)
                                                                                       TGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAAT        >  SRR4302540.6307092/1‑94 (MQ=60)
                                                                                       TGGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAAT        <  SRR4302540.2804142/94‑1 (MQ=60)
                                                                                        GGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATG       >  SRR4302540.9279695/1‑94 (MQ=60)
                                                                                        GGTATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATG       >  SRR4302540.120212/1‑94 (MQ=60)
                                                                                          TATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATGCA     >  SRR4302540.4465643/1‑94 (MQ=60)
                                                                                          TATGGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATGCA     <  SRR4302540.5632031/94‑1 (MQ=60)
                                                                                             GGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATGCACGG  >  SRR4302540.9075185/1‑94 (MQ=60)
                                                                                             GGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACACCATGATATATCGATAAAATAATCTCTACATTTGAAAATGCACGC  >  SRR4302540.4458492/1‑94 (MQ=60)
                                                                                             |                                                                                             
AGATTATTTCCATCACTTCGTGAGAGCTTCATGCCTTGAGAGGATCTCAATTTTCTTTTGCAATGAGACAGGCGCTTCCTGTTGTTATGGTATAGTACCCCGCTATTGAGCCTCCTGAATAGTGATGCTGAATAACATAACCCCATGATATATCGATAAAATAATCTCTACATTTGAAAATGCACGG  >  NC_000913/4259069‑4259255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑