Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,284,295 A→G V219A (GTA→GCA)  acs ← acetyl‑CoA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,284,2950AG99.4% 1010.0 / ‑5.1 316V219A (GTA→GCA) acsacetyl‑CoA synthetase
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (170/142);  total (170/146)
Fisher's exact test for biased strand distribution p-value = 2.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 345 total aligned reads displayed.

TGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACA  >  NC_000913/4284205‑4284384
                                                                                           |                                                                                         
tGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTgcc                                                                                         >  2:6457901/1‑93 (MQ=255)
 ggTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTgcca                                                                                        >  1:1018756/1‑93 (MQ=255)
   tGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTgccacc                                                                                      >  2:3663785/1‑93 (MQ=255)
      tGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACcaca                                                                                   >  1:8343526/1‑93 (MQ=255)
      tGATCGCTCGCTTCCCACACCGGGTCGTCCCCCCACAGGTCGCCCCCTTCCTG‑CCAGTCATTTTTCCCGCCAGTACGCTTCAGTGCCACcaca                                                                                   <  1:8979182/93‑1 (MQ=255)
       gATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAt                                                                                  >  1:525516/1‑93 (MQ=255)
       gATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAt                                                                                  >  2:6252064/1‑93 (MQ=255)
       gATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAt                                                                                  >  1:8747604/1‑93 (MQ=255)
        aTCGCTCGCTTGCTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATg                                                                                 <  1:1477604/93‑1 (MQ=255)
        aTCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATg                                                                                 >  1:3938122/1‑93 (MQ=255)
           ccccgctTGCTCAACCAGGTCGTGCCCCCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGctc                                                                              <  2:2960545/90‑1 (MQ=255)
            ctcgctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGctct                                                                             >  2:9481167/1‑93 (MQ=255)
            ctcgctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGctct                                                                             >  2:8475348/1‑93 (MQ=255)
             tcgctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTa                                                                            >  1:1606278/1‑93 (MQ=255)
               gctTGCTCAACCAGGTCGTGCCCCCACAGGCCGCGCCCTTCCTG‑CCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACg                                                                          <  2:7199237/93‑1 (MQ=255)
               gctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACg                                                                          >  1:5599622/1‑93 (MQ=255)
                ctgccTCACCCAGGTCGGGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGc                                                                         <  1:7906067/89‑1 (MQ=255)
                  tGCTCACCCAGGTCGTGCCCCCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTg                                                                       <  2:4438739/93‑1 (MQ=255)
                  tGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTg                                                                       >  2:5457636/1‑93 (MQ=255)
                  tGCCCAACCAGGTCGTGCCACCACAGGTCGCGCCCTCCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTg                                                                       <  1:6353458/93‑1 (MQ=255)
                    cTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                     <  1:4426013/93‑1 (MQ=255)
                      cAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTgc                                                                   >  1:6887031/1‑92 (MQ=255)
                      cAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGa                                                                   >  1:7644370/1‑93 (MQ=255)
                       acccAGGGCGTCCCCCCACAGGTCGCCCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGAc                                                                  <  2:1892226/91‑1 (MQ=255)
                          cAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGtt                                                               >  1:4814068/1‑93 (MQ=255)
                          cAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGtt                                                               >  1:4281659/1‑93 (MQ=255)
                           aGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTc                                                              <  1:3049616/93‑1 (MQ=255)
                            ggTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCg                                                             >  1:8177388/1‑93 (MQ=255)
                            ggTCGTCCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCg                                                             <  1:9673663/93‑1 (MQ=255)
                             gTCGTGCCACCACGGGTCGCCCCTTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCgg                                                            <  1:1977101/93‑1 (MQ=255)
                             gTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCgg                                                            >  1:7312648/1‑93 (MQ=255)
                                gTGCCCCCACGGGCCGCGCCCTTCCTG‑CCAGACAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGtt                                                         <  2:9120545/93‑1 (MQ=255)
                                gTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCAGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGtt                                                         >  1:1057235/1‑93 (MQ=255)
                                    caccacAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTc                                                     >  1:5557610/1‑93 (MQ=255)
                                      ccacAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAg                                                   >  2:6360928/1‑93 (MQ=255)
                                      ccacAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAg                                                   >  2:8353434/1‑93 (MQ=255)
                                       cacaGGTCGCCCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAgc                                                  <  1:3647176/93‑1 (MQ=255)
                                        acaGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAgcg                                                 >  1:1206451/1‑93 (MQ=255)
                                           ggTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGt                                              >  2:3721755/1‑93 (MQ=255)
                                                cgcCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGtcatca                                         >  2:1192799/1‑93 (MQ=255)
                                                cgcCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGtcatca                                         >  2:8033292/1‑93 (MQ=255)
                                                 gcCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCaa                                        >  2:4638034/1‑93 (MQ=255)
                                                 ccccTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCaa                                        <  2:5240225/92‑1 (MQ=255)
                                                  cccTTCCCGCCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCaa                                        <  1:6015790/93‑1 (MQ=255)
                                                   ccTCCCTG‑CCAGTCAATTCTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGTTTTTTCAGCGCGTCATCAACg                                      <  2:4779547/93‑1 (MQ=255)
                                                    ctgccTG‑CCAGTTAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGt                                     <  2:2340861/90‑1 (MQ=255)
                                                    cTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCCTCCACGt                                     >  2:7765112/1‑93 (MQ=255)
                                                    cTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGt                                     >  2:7339272/1‑93 (MQ=255)
                                                    cTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGt                                     >  1:7058288/1‑93 (MQ=255)
                                                     ttCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtt                                    >  2:9195132/1‑93 (MQ=255)
                                                     ttCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtt                                    >  2:7701053/1‑93 (MQ=255)
                                                     tgccTG‑CCAGTCATTTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGATTTTTCAGCGCGTCATCAACGtt                                    <  2:7439814/91‑1 (MQ=255)
                                                       ccTG‑CCAGTCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtttt                                  <  1:278113/93‑1 (MQ=255)
                                                       ccTG‑CCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtttt                                  <  2:6638867/93‑1 (MQ=255)
                                                         tG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACCTGCTCTACGCTGGTGACGTTCGGGGTTTTCAGCGCGTCATCAACGtgtttt                                >  2:2662431/1‑92 (MQ=255)
                                                          g‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGCCATCAACGTTTttct                               >  1:8125261/1‑93 (MQ=255)
                                                            ccAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttctt                              <  2:4292046/93‑1 (MQ=255)
                                                              aGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCa                            <  2:5679574/93‑1 (MQ=255)
                                                              aGTCAATTTTCCCGCCAGTCCGCTTCAGTGCCACCACATGCTCTAAGCTGGTGACGTTCGGGTTTTTCCGCTCGTCATCAACGTTTTTCTTCa                            >  2:219271/1‑93 (MQ=255)
                                                              aGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCa                            <  2:6048138/93‑1 (MQ=255)
                                                              aGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCa                            <  2:5095657/93‑1 (MQ=255)
                                                              aGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCa                            >  2:3942463/1‑93 (MQ=255)
                                                               gTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAg                           >  1:9446856/1‑93 (MQ=255)
                                                               gTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAg                           >  1:4271756/1‑93 (MQ=255)
                                                               gTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAg                           <  2:9704279/93‑1 (MQ=255)
                                                                tCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGc                          <  2:3244926/93‑1 (MQ=255)
                                                                tCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGc                          >  1:451556/1‑93 (MQ=255)
                                                                tCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGc                          >  2:2068737/1‑93 (MQ=255)
                                                                tCAATTTTCCCGCCAGTACGCTTCAGTCCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGc                          <  2:8549054/93‑1 (MQ=255)
                                                                tCAATTTGCCCGCCAGTACGCTTCAGTTCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGc                          <  1:6675958/93‑1 (MQ=255)
                                                                 taaTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCg                         <  2:2438400/92‑1 (MQ=255)
                                                                 cAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCCGCGCGTCATCAACGTTTTTCTTCAGCg                         >  1:6103336/1‑93 (MQ=255)
                                                                 cAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCg                         >  1:2469656/1‑93 (MQ=255)
                                                                 cAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCg                         >  2:3085316/1‑93 (MQ=255)
                                                                 cAATTTGCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCg                         <  1:672065/93‑1 (MQ=255)
                                                                 cAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCg                         <  2:4069682/93‑1 (MQ=255)
                                                                  aaTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCgg                        >  1:7988455/1‑93 (MQ=255)
                                                                   tttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGa                       <  1:4079941/92‑1 (MQ=255)
                                                                   aTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGa                       <  2:7278269/93‑1 (MQ=255)
                                                                   aTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGa                       <  2:3315396/93‑1 (MQ=255)
                                                                    ttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGaa                      <  1:6263745/93‑1 (MQ=255)
                                                                      ttCCCGCCAGTACGTTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATa                    <  1:2147732/93‑1 (MQ=255)
                                                                       ccccGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTACCGCAGAAtgc                   <  2:8922679/92‑3 (MQ=255)
                                                                         ccGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTg                 <  1:8842305/93‑1 (MQ=255)
                                                                         ccGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTg                 <  1:2706261/93‑1 (MQ=255)
                                                                           gCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTgcg               <  2:1526163/93‑1 (MQ=255)
                                                                            ccAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTgcgc              >  1:8655618/1‑93 (MQ=255)
                                                                             cAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGcc             <  2:5989107/93‑1 (MQ=255)
                                                                             cAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGcc             >  1:3845783/1‑93 (MQ=255)
                                                                               gTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCg           >  1:2256541/1‑93 (MQ=255)
                                                                               gTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCg           >  1:5376226/1‑93 (MQ=255)
                                                                               gTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCg           <  1:4373363/93‑1 (MQ=255)
                                                                                tACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCgg          >  2:4912267/1‑93 (MQ=255)
                                                                                  cGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgca        <  1:7241961/93‑1 (MQ=255)
                                                                                  cGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgca        <  2:7078259/93‑1 (MQ=255)
                                                                                    cTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcacg      >  1:8589464/1‑93 (MQ=255)
                                                                                      tCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcacgca    <  1:3218563/93‑1 (MQ=255)
                                                                                      tCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcacgca    <  1:7517480/93‑1 (MQ=255)
                                                                                      tCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcacgca    <  1:5941549/93‑1 (MQ=255)
                                                                                        aGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGcaca  >  2:3452525/1‑93 (MQ=255)
                                                                                           |                                                                                         
TGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACA  >  NC_000913/4284205‑4284384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  NC_000913/4284202‑4284388
                                                                                              |                                                                                             
GCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTG                                                                                               <  SRR4302540.8125327/94‑1 (MQ=60)
GCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTG                                                                                               >  SRR4302540.2136355/1‑94 (MQ=60)
GCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGGCGCGCCCTTCCAG‑CCAGTCAAGATTCCCGCCAGTACGCTTCAGTG                                                                                               >  SRR4302540.9052902/1‑94 (MQ=60)
  CTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCC                                                                                             >  SRR4302540.442773/1‑94 (MQ=60)
  CTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCC                                                                                             >  SRR4302540.5129019/1‑94 (MQ=60)
  CTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCC                                                                                             >  SRR4302540.5182762/1‑94 (MQ=60)
  CTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCC                                                                                             >  SRR4302540.7285404/1‑94 (MQ=60)
   TGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCA                                                                                            >  SRR4302540.1029094/1‑94 (MQ=60)
    GGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCAC                                                                                           >  SRR4302540.3598541/1‑94 (MQ=60)
     GTGCTGTCCGCTCGCTCGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACC                                                                                          <  SRR4302540.2146436/94‑1 (MQ=60)
     GTGCTGATCGCTCGCTTGCTCACCCAGGTCGTGCCCCCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACC                                                                                          <  SRR4302540.5612815/94‑1 (MQ=60)
     GTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACC                                                                                          >  SRR4302540.6199256/1‑94 (MQ=60)
     GTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACC                                                                                          >  SRR4302540.283965/1‑94 (MQ=60)
      TGCTGATCGCTGCCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCA                                                                                         <  SRR4302540.398913/94‑1 (MQ=60)
      TGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCA                                                                                         >  SRR4302540.8787077/1‑94 (MQ=60)
       GCGGATCGCTCGCTTGCACACCCAGGTCGGGCCACCACGGGGCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCAC                                                                                        <  SRR4302540.4536359/94‑1 (MQ=60)
        CTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACA                                                                                       >  SRR4302540.8440368/1‑94 (MQ=60)
        CTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACA                                                                                       >  SRR4302540.8297575/1‑94 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      >  SRR4302540.3796808/1‑94 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      >  SRR4302540.6399966/1‑94 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      >  SRR4302540.8849115/1‑94 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302540.7958315/94‑1 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      >  SRR4302540.531196/1‑94 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      >  SRR4302540.8560955/1‑94 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      >  SRR4302540.4097382/1‑94 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGTCGTCCCACCACAGGTCGCCCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302540.6427252/94‑1 (MQ=60)
         TGATCGCTCGCTTGCTCAACCAGGCCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302540.8166584/94‑1 (MQ=60)
         TGATCGCTCGCTTCCCACACCGGGTCGTCCCCCCACAGGTCGCCCCCTTCCTG‑CCAGTCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302540.9086141/94‑1 (MQ=48)
          GATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATG                                                                                     >  SRR4302540.824710/1‑94 (MQ=60)
          GATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATG                                                                                     >  SRR4302540.4427527/1‑94 (MQ=60)
          GATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATG                                                                                     >  SRR4302540.3980672/1‑94 (MQ=60)
          GATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACAACATG                                                                                     >  SRR4302540.6755753/1‑94 (MQ=60)
           atgccccgcgTGCTCAACCAGGTCGTGAGACCCCAGGGCGCGCCCTTCCTG‑CCAGCCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGC                                                                                    <  SRR4302540.1493785/84‑1 (MQ=60)
           ATCGCTCGCTTGCTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGC                                                                                    <  SRR4302540.1493784/94‑1 (MQ=60)
            tccccccctgcccCAACCAGGTCGTGCCACCACAGTTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCT                                                                                   <  SRR4302540.8116657/81‑1 (MQ=60)
            TCGCTCGCTTGCTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCT                                                                                   <  SRR4302540.1044569/94‑1 (MQ=60)
            TCGCTCGCTTGCTCAACCAGGTCGTCCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCT                                                                                   <  SRR4302540.1044568/94‑1 (MQ=60)
             CGCTCGCTTGCTCAACCAGGTCGTGCCACCACGGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTC                                                                                  <  SRR4302540.5632917/94‑1 (MQ=60)
             CGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTC                                                                                  >  SRR4302540.9004666/1‑94 (MQ=60)
               CTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTC                                                                                >  SRR4302540.8618075/1‑94 (MQ=60)
               CTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTA                                                                                >  SRR4302540.6539912/1‑94 (MQ=60)
               CTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTA                                                                                >  SRR4302540.1991572/1‑94 (MQ=60)
               CTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTA                                                                                >  SRR4302540.1623859/1‑94 (MQ=60)
               CTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTA                                                                                >  SRR4302540.8576258/1‑94 (MQ=60)
                ccgcttcccCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTAC                                                                               <  SRR4302540.5983601/85‑1 (MQ=60)
                TCGCTTGCTCACCCAGTTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTAC                                                                               <  SRR4302540.1369789/94‑1 (MQ=60)
                TCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTAC                                                                               >  SRR4302540.1562343/1‑94 (MQ=60)
                TCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCCCCCTTCCTC‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTAC                                                                               <  SRR4302540.5906213/94‑1 (MQ=60)
                 CGCTTGCTCACCCGGGTCGTCCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACG                                                                              <  SRR4302540.44560/94‑1 (MQ=60)
                 CGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACG                                                                              >  SRR4302540.5661229/1‑94 (MQ=60)
                 CGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACG                                                                              >  SRR4302540.9089192/1‑94 (MQ=60)
                 CGCTTCCTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACG                                                                              <  SRR4302540.7121380/94‑1 (MQ=60)
                  GCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGC                                                                             >  SRR4302540.8070119/1‑94 (MQ=60)
                   ctgcctcacCCAGGTCGGGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCT                                                                            <  SRR4302540.7998267/85‑1 (MQ=60)
                     TGCCCAACCAGGTCGTGCCACCACAGGTCGCGCCCTCCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGG                                                                          <  SRR4302540.6424215/94‑1 (MQ=60)
                      CCTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGT                                                                         <  SRR4302540.4332889/94‑1 (MQ=60)
                      CCTCAACCAGGTCGGGCCCCCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGT                                                                         <  SRR4302540.6867783/94‑1 (MQ=60)
                       CTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTG                                                                        <  SRR4302540.4473965/94‑1 (MQ=60)
                       CTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTG                                                                        >  SRR4302540.7379502/1‑94 (MQ=60)
                        TCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGC                                                                       >  SRR4302540.6963382/1‑94 (MQ=60)
                        TCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGA                                                                       >  SRR4302540.7730410/1‑94 (MQ=60)
                         CAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGAC                                                                      >  SRR4302540.7668507/1‑94 (MQ=60)
                         CAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGAC                                                                      >  SRR4302540.4033123/1‑94 (MQ=60)
                         CAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGAC                                                                      >  SRR4302540.9764110/1‑94 (MQ=60)
                          AACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACG                                                                     >  SRR4302540.5375753/1‑94 (MQ=60)
                           ACCGGGTCGTGCCCCCACGGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGT                                                                    <  SRR4302540.3211695/94‑1 (MQ=60)
                           ACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGT                                                                    >  SRR4302540.139985/1‑94 (MQ=60)
                            CCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTT                                                                   >  SRR4302540.4865594/1‑94 (MQ=60)
                            CCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTT                                                                   >  SRR4302540.4328229/1‑94 (MQ=60)
                              AGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCG                                                                 >  SRR4302540.8272374/1‑94 (MQ=60)
                              AGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCG                                                                 >  SRR4302540.8272373/1‑94 (MQ=60)
                              AGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCG                                                                 >  SRR4302540.8295135/1‑94 (MQ=60)
                              AGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCG                                                                 <  SRR4302540.3083072/94‑1 (MQ=60)
                               GGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGG                                                                >  SRR4302540.7394299/1‑94 (MQ=60)
                               GGTCGTCCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGG                                                                <  SRR4302540.9787489/94‑1 (MQ=60)
                                GTCGTGCCACCACGGGTCGCCCCTTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGG                                                               <  SRR4302540.1998549/94‑1 (MQ=60)
                                GTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGG                                                               >  SRR4302540.2099184/1‑94 (MQ=60)
                                 TCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGT                                                              >  SRR4302540.276667/1‑94 (MQ=60)
                                  CGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTT                                                             >  SRR4302540.1068000/1‑94 (MQ=60)
                                  CGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTT                                                             >  SRR4302540.7287078/1‑94 (MQ=60)
                                  CGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCAGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTT                                                             >  SRR4302540.1067998/1‑94 (MQ=60)
                                    TGCCACCACGGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTT                                                           <  SRR4302540.1125895/94‑1 (MQ=60)
                                     GCCCCCACGGGTCGCCCCCTTCCTG‑CCAGTCAATTTGCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTT                                                          <  SRR4302540.6136409/94‑1 (MQ=60)
                                     GCCCCCACAGGTCGCCCCCTCCCTG‑CCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTT                                                          <  SRR4302540.4328217/94‑1 (MQ=60)
                                     GCCACCACGGGCCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTT                                                          <  SRR4302540.5474453/94‑1 (MQ=60)
                                      cccccacggggcgccCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTC                                                         <  SRR4302540.8033394/79‑1 (MQ=60)
                                      CCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTC                                                         >  SRR4302540.872777/1‑94 (MQ=60)
                                      CCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTC                                                         >  SRR4302540.5618823/1‑94 (MQ=60)
                                       CACCCCGGGTCGCGCCCTTCCTG‑CCAGTAAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCA                                                        <  SRR4302540.824791/94‑1 (MQ=60)
                                       CACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCA                                                        >  SRR4302540.8922204/1‑94 (MQ=60)
                                        cccccaggtccccccctcCCTG‑CCAGTCAGTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAG                                                       <  SRR4302540.5608814/76‑1 (MQ=60)
                                        CCCACAGGTCGCCCCCTCCCTG‑CCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAG                                                       <  SRR4302540.8901239/94‑1 (MQ=60)
                                          CACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCG                                                     >  SRR4302540.1218836/1‑94 (MQ=60)
                                          CACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCG                                                     >  SRR4302540.2387432/1‑94 (MQ=60)
                                          CACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCG                                                     <  SRR4302540.6922751/94‑1 (MQ=60)
                                          CACAGGTCGCCCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCG                                                     <  SRR4302540.3687127/94‑1 (MQ=60)
                                            CAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCG                                                   >  SRR4302540.9836170/1‑94 (MQ=60)
                                              gggcggcCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTC                                                 <  SRR4302540.2683120/87‑1 (MQ=60)
                                              GGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTC                                                 >  SRR4302540.2574218/1‑94 (MQ=60)
                                              GGTCGCGCCCTTCCTG‑CCAGTCAATTGTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTC                                                 <  SRR4302540.4320128/94‑1 (MQ=60)
                                                TCGCCCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCAT                                               <  SRR4302540.2764459/94‑1 (MQ=60)
                                                 CGCCCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATC                                              <  SRR4302540.8815565/94‑1 (MQ=60)
                                                  GCGCCCTTCCTG‑CCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCA                                             <  SRR4302540.415946/94‑1 (MQ=60)
                                                     CCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACG                                          <  SRR4302540.678272/94‑1 (MQ=60)
                                                     CCCTTCCCGCCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAAC                                           <  SRR4302540.6082505/94‑1 (MQ=60)
                                                      CCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGT                                         >  SRR4302540.7136781/1‑94 (MQ=60)
                                                       CTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTT                                        >  SRR4302540.6167420/1‑94 (MQ=60)
                                                       CTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTT                                        >  SRR4302540.7511357/1‑94 (MQ=60)
                                                        TTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTT                                       >  SRR4302540.2258484/1‑94 (MQ=60)
                                                        TTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTT                                       >  SRR4302540.4789367/1‑94 (MQ=60)
                                                          CCTG‑CCAGTCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTT                                     <  SRR4302540.280844/94‑1 (MQ=60)
                                                          CCGG‑CCATTCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTT                                     <  SRR4302540.3898504/94‑1 (MQ=60)
                                                            TG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCT                                   >  SRR4302540.7084842/1‑94 (MQ=60)
                                                            TG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGCCATCAACGTTTTTCT                                   >  SRR4302540.8219566/1‑94 (MQ=60)
                                                               gtggtcatTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTC                                 <  SRR4302540.4548085/86‑1 (MQ=60)
                                                               CCATTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTC                                 <  SRR4302540.4338856/94‑1 (MQ=60)
                                                               CCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTC                                 >  SRR4302540.6051079/1‑94 (MQ=60)
                                                                CAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCA                                <  SRR4302540.8134020/94‑1 (MQ=60)
                                                                CAGTAAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCA                                <  SRR4302540.5872072/94‑1 (MQ=60)
                                                                 attcattttcCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAG                               <  SRR4302540.24355/84‑1 (MQ=60)
                                                                 AGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAG                               >  SRR4302540.784010/1‑94 (MQ=60)
                                                                 AGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAG                               >  SRR4302540.4318216/1‑94 (MQ=60)
                                                                 AGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAG                               >  SRR4302540.9558999/1‑94 (MQ=60)
                                                                  GTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              >  SRR4302540.2625303/1‑94 (MQ=60)
                                                                  GTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              >  SRR4302540.4916459/1‑94 (MQ=60)
                                                                  GTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              >  SRR4302540.456369/1‑94 (MQ=60)
                                                                  GTCAATTTCCCCGCCCGTACGCTTCAGTGCCAGCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              <  SRR4302540.250688/94‑1 (MQ=60)
                                                                   TCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCCGCGCGTCATCAACGTTTTTCTTCAGCG                             >  SRR4302540.6171301/1‑94 (MQ=60)
                                                                   TCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCG                             >  SRR4302540.8735501/1‑94 (MQ=60)
                                                                   TCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCG                             >  SRR4302540.2496241/1‑94 (MQ=60)
                                                                   TCAATTTGCCCGCCAGTACGCTTCAGTTCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCG                             <  SRR4302540.6749706/94‑1 (MQ=60)
                                                                    CAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGG                            >  SRR4302540.8081468/1‑94 (MQ=60)
                                                                    CAATTTGCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGG                            <  SRR4302540.679267/94‑1 (MQ=60)
                                                                      TTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAA                          <  SRR4302540.4123931/94‑1 (MQ=60)
                                                                      ATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAA                          >  SRR4302540.3129522/1‑94 (MQ=60)
                                                                       TTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAAT                         <  SRR4302540.6013072/94‑1 (MQ=60)
                                                                       TTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAAT                         <  SRR4302540.6333430/94‑1 (MQ=60)
                                                                       TTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAAT                         <  SRR4302540.7664656/94‑1 (MQ=60)
                                                                       TTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAAT                         <  SRR4302540.3252590/94‑1 (MQ=60)
                                                                       TTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAAT                         <  SRR4302540.8974896/94‑1 (MQ=60)
                                                                         TTCCCGCCAGTACGTTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATAC                       <  SRR4302540.2170827/94‑1 (MQ=60)
                                                                         TTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATAC                       <  SRR4302540.2937474/94‑1 (MQ=60)
                                                                         TCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATAC                       <  SRR4302540.7501157/94‑1 (MQ=60)
                                                                         TCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATAC                       <  SRR4302540.6163305/94‑1 (MQ=60)
                                                                          TCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACT                      <  SRR4302540.3361607/94‑1 (MQ=60)
                                                                          TCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACT                      >  SRR4302540.1568808/1‑94 (MQ=60)
                                                                           CCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTG                     >  SRR4302540.2209118/1‑94 (MQ=60)
                                                                           CCCGCCAGTAAGTGTCAGTGCCACCACATGCTCTACGCTTGTGACGTTCGGGTTTTTCAGCGCGTCATCAACTTTTTTCTTCAGCGGAATACTG                     <  SRR4302540.9843560/94‑1 (MQ=60)
                                                                            CCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGC                    <  SRR4302540.2735449/94‑1 (MQ=60)
                                                                            CCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGC                    <  SRR4302540.8944586/94‑1 (MQ=60)
                                                                            CCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGC                    <  SRR4302540.7154977/94‑1 (MQ=60)
                                                                            CCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGC                    <  SRR4302540.2277105/94‑1 (MQ=60)
                                                                             CGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCG                   <  SRR4302540.7480212/94‑1 (MQ=60)
                                                                              GCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGC                  >  SRR4302540.8756166/1‑94 (MQ=60)
                                                                               CCAGTACGCTTCAGTGCCACCGCATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCC                 <  SRR4302540.3728659/94‑1 (MQ=60)
                                                                               CCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCC                 >  SRR4302540.3887604/1‑94 (MQ=60)
                                                                               CCAGTACGCTTCACTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCC                 >  SRR4302540.5656896/1‑94 (MQ=60)
                                                                                CAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCC                <  SRR4302540.8789811/94‑1 (MQ=60)
                                                                                CAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCC                <  SRR4302540.3962369/94‑1 (MQ=60)
                                                                                CAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCC                <  SRR4302540.4628885/94‑1 (MQ=60)
                                                                                CAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGCGACGATCGGGTTTTTCATCGAGGCATAAACGTCTTTTTTCAGCGGAATACCGCGCCC                >  SRR4302540.7296025/1‑94 (MQ=42)
                                                                                 AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               >  SRR4302540.5435345/1‑94 (MQ=60)
                                                                                 AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               >  SRR4302540.2280759/1‑94 (MQ=60)
                                                                                 AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               <  SRR4302540.427596/94‑1 (MQ=60)
                                                                                 AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               >  SRR4302540.1656406/1‑94 (MQ=60)
                                                                                 AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               >  SRR4302540.1422639/1‑94 (MQ=60)
                                                                                 AGTACGCTTCAGTACCACCACATACTCTACGCTGGTGACGTACGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               <  SRR4302540.9061568/94‑1 (MQ=60)
                                                                                  GTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGG              <  SRR4302540.4420860/94‑1 (MQ=60)
                                                                                    ACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCA            >  SRR4302540.6832085/1‑94 (MQ=60)
                                                                                     CGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCAC           <  SRR4302540.7322743/94‑1 (MQ=60)
                                                                                     CGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCAC           >  SRR4302540.6650401/1‑94 (MQ=60)
                                                                                     CGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCAC           >  SRR4302540.3881975/1‑94 (MQ=60)
                                                                                      GCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACG          >  SRR4302540.8689320/1‑94 (MQ=60)
                                                                                      GCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACG          >  SRR4302540.9437447/1‑94 (MQ=60)
                                                                                       CTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGC         <  SRR4302540.788075/94‑1 (MQ=60)
                                                                                       CTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGC         >  SRR4302540.6374566/1‑94 (MQ=60)
                                                                                        TTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCA        >  SRR4302540.6304185/1‑94 (MQ=60)
                                                                                        TTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCA        >  SRR4302540.1731260/1‑94 (MQ=60)
                                                                                         TCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCAC       <  SRR4302540.6007229/94‑1 (MQ=60)
                                                                                         TCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCAC       <  SRR4302540.3253528/94‑1 (MQ=60)
                                                                                         TCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCAC       <  SRR4302540.9572845/94‑1 (MQ=60)
                                                                                         TCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCAC       <  SRR4302540.7601540/94‑1 (MQ=60)
                                                                                          CAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACA      >  SRR4302540.7355231/1‑94 (MQ=60)
                                                                                          CAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACA      >  SRR4302540.4318269/1‑94 (MQ=60)
                                                                                          CAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACA      >  SRR4302540.5420786/1‑94 (MQ=60)
                                                                                           AGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAC     >  SRR4302540.2369826/1‑94 (MQ=60)
                                                                                           AGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAC     >  SRR4302540.9084819/1‑94 (MQ=60)
                                                                                           AGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAC     >  SRR4302540.81567/1‑94 (MQ=60)
                                                                                           AGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAC     >  SRR4302540.5871691/1‑94 (MQ=60)
                                                                                           AGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAC     <  SRR4302540.456273/94‑1 (MQ=60)
                                                                                            GTGCCACCCCATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACC    <  SRR4302540.1102846/94‑1 (MQ=60)
                                                                                            GTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACC    >  SRR4302540.4802624/1‑94 (MQ=60)
                                                                                             TGCCACCACATGCTCTACGCTGGTGACGTTCGTGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCT   <  SRR4302540.10078765/94‑1 (MQ=60)
                                                                                              GCCACCACATGCTCTACGCTGGTGACGTTCGGTTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  <  SRR4302540.9094665/94‑1 (MQ=60)
                                                                                              GCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  SRR4302540.9891660/1‑94 (MQ=60)
                                                                                              GCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  <  SRR4302540.401814/94‑1 (MQ=60)
                                                                                              GCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  SRR4302540.4177516/1‑94 (MQ=60)
                                                                                              GCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  SRR4302540.7841172/1‑94 (MQ=60)
                                                                                              |                                                                                             
GCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTG‑CCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  NC_000913/4284202‑4284388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑