Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,322,882	C→T	T146T (ACG→ACA)	phnB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,322,882	0	C	T	99.7%	1331.6 / ‑5.6	370	T146T (ACG→ACA)	phnB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (170/199); total (171/199)
Fisher's exact test for biased strand distribution p-value = 4.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01

Only 100 of 413 total aligned reads displayed.

CGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGCGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTG  >  NC_000913/4322792‑4322971

cGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTgtgt                                                                                          <  1:5235913/93‑1 (MQ=255)

cGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTgtgt                                                                                          <  1:9413776/93‑1 (MQ=255)

 gATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTgtt                                                                                         <  1:7919797/93‑1 (MQ=255)

 gATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTgtt                                                                                         <  2:3341326/93‑1 (MQ=255)

   tttGGTTAATTAAAAGTGACTAACCGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTgttgg                                                                                       >  2:8746767/1‑93 (MQ=255)

   tttGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTgttgg                                                                                       >  1:7661189/1‑93 (MQ=255)

   tttGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTgttgg                                                                                       >  2:2449573/1‑93 (MQ=255)

   tttGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTgttgg                                                                                       >  1:6089661/1‑93 (MQ=255)

     tGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTgttggtt                                                                                     <  2:9374756/93‑1 (MQ=255)

     tGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTgttggtt                                                                                     >  1:48925/1‑93 (MQ=255)

      ggTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGCgttggttg                                                                                    >  1:4381357/1‑93 (MQ=255)

       gTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGggtgt                                                                                   >  2:518229/1‑93 (MQ=255)

        ttaattaaAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGgttgtt                                                                                  >  2:1765065/1‑93 (MQ=255)

            ttaaAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGttt                                                                              >  1:9282455/1‑93 (MQ=255)

            ttaaAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGttt                                                                              >  2:5336994/1‑93 (MQ=255)

            ttaaAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGttt                                                                              >  2:5640262/1‑93 (MQ=255)

              aaaaGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCGTCCCGGCGGGGTGTTTTGTTGGTTGGTTTTTga                                                                            >  1:2551804/1‑93 (MQ=255)

              aaaaGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTga                                                                            >  2:3598007/1‑93 (MQ=255)

              aaaaGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTga                                                                            >  1:9760384/1‑93 (MQ=255)

              aaaaGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTga                                                                            <  1:2749407/93‑1 (MQ=255)

               aaaGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTgac                                                                           <  2:5991551/93‑1 (MQ=255)

                aaGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTTTGTTGGGTGTTGttttttg                                                                          >  2:3688297/1‑89 (MQ=255)

                  gTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTgacgac                                                                        <  1:4074566/93‑1 (MQ=255)

                   tGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACa                                                                       <  1:1778472/93‑1 (MQ=255)

                   tGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACa                                                                       >  1:6743430/1‑93 (MQ=255)

                      cTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTa                                                                    >  2:4673552/1‑93 (MQ=255)

                       tAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTaa                                                                   <  2:3980760/93‑1 (MQ=255)

                       tAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTACCGGCGGGTTATTGTGTTGGTTGTTGTATGACGACATTaa                                                                   >  1:6032100/1‑93 (MQ=255)

                        aaCAGATGAAGAGTTAACGTGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGCTGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAat                                                                  <  2:4981884/93‑1 (MQ=255)

                        aaCAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAat                                                                  <  1:299342/93‑1 (MQ=255)

                        aaCAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGACATTAat                                                                  >  1:8909283/1‑93 (MQ=255)

                        aaCAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGACATTAat                                                                  >  2:659246/1‑93 (MQ=255)

                         aCAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAatc                                                                 >  1:8053339/1‑93 (MQ=255)

                         aCAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAatc                                                                 <  2:8552850/93‑1 (MQ=255)

                         aCAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTACCGGCGGGCTAATGAGTTGGGTGTTGATTGGCGACATTAatt                                                                 >  2:1305045/1‑92 (MQ=255)

                          cAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAatca                                                                >  2:6355418/1‑93 (MQ=255)

                           aGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAatcat                                                               >  2:1648831/1‑93 (MQ=255)

                           aGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAatcat                                                               <  2:5420159/93‑1 (MQ=255)

                            gATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAatcatc                                                              >  1:6954190/1‑93 (MQ=255)

                            gATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGCGTTGGTTGTTGTTTGACGACATTAatcatc                                                              >  1:1374184/1‑93 (MQ=255)

                             aTGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATcc                                                             >  2:9566057/1‑93 (MQ=255)

                             aTGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATcc                                                             >  1:2391696/1‑93 (MQ=255)

                              tGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCa                                                            <  1:515593/93‑1 (MQ=255)

                                aaGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACg                                                          <  1:1074041/93‑1 (MQ=255)

                                aaGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGAAATTAATCATCCACg                                                          >  2:2103667/1‑93 (MQ=255)

                                 agagTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACgg                                                         <  1:9194304/93‑1 (MQ=255)

                                 agagTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGGTTGACGACATTAATCATCCACgg                                                         >  2:765300/1‑93 (MQ=255)

                                  gagTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGt                                                        >  1:8182972/1‑93 (MQ=255)

                                    gTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTTACGACATTAATCATCCACGGTAc                                                      >  1:3952219/1‑93 (MQ=255)

                                    gTTAACGGGAAGTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTTTTGGTTGTTGTTTGACGACATTAATCATCCACGGTAc                                                      <  1:8307403/93‑1 (MQ=255)

                                     ttAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACg                                                     >  1:1160841/1‑93 (MQ=255)

                                      tAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑c                                                   <  1:961303/93‑1 (MQ=255)

                                         cGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCaa                                                >  1:7018103/1‑93 (MQ=255)

                                          gggAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCaaa                                               >  2:6159605/1‑93 (MQ=255)

                                          gggAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCaaa                                               <  2:3141930/93‑1 (MQ=255)

                                            gAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAAtt                                             <  1:5443115/93‑1 (MQ=255)

                                              aTTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTa                                           >  2:9864898/1‑93 (MQ=255)

                                              aTTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTa                                           <  1:8490754/93‑1 (MQ=255)

                                              aTTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTTTGTTGGTTGTTGTTTGACGACATTAATTCTCCACGGTACGCCCAAAttt                                            >  1:1906431/1‑93 (MQ=255)

                                                tCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATc                                         <  2:6934029/93‑1 (MQ=255)

                                                    tGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTg                                     >  1:5810234/1‑93 (MQ=255)

                                                     gACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGa                                    <  1:1002797/93‑1 (MQ=255)

                                                     gACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGa                                    <  2:5273339/93‑1 (MQ=255)

                                                     gACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGa                                    >  2:8447749/1‑93 (MQ=255)

                                                      aCAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGAc                                   <  2:2385467/93‑1 (MQ=255)

                                                       cAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACt                                  <  2:7815282/93‑1 (MQ=255)

                                                         gTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACttt                                <  2:2726610/93‑1 (MQ=255)

                                                         gTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACttt                                <  2:8876332/93‑1 (MQ=255)

                                                          tGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTg                               >  2:4575286/1‑93 (MQ=255)

                                                           gCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGc                              <  2:5886875/93‑1 (MQ=255)

                                                             gggAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGGACG‑CCAAATTTATCGGTGACTTTGCCa                            >  1:4140666/1‑93 (MQ=255)

                                                              ggAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCaa                           >  1:3136134/1‑93 (MQ=255)

                                                               gAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCaaa                          <  2:1219167/93‑1 (MQ=255)

                                                                aGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAg                         <  1:729980/93‑1 (MQ=255)

                                                                 gggcgggcCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGc                        >  2:1406476/1‑93 (MQ=255)

                                                                  ggcgggcCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGcc                       >  2:7973510/1‑93 (MQ=255)

                                                                   gcgggcCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCa                      <  2:4897690/93‑1 (MQ=255)

                                                                   gcgggcCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCa                      <  2:2938999/93‑1 (MQ=255)

                                                                   gcgggcCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCa                      <  1:1838711/93‑1 (MQ=255)

                                                                      ggcCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATgc                   >  2:6748577/1‑93 (MQ=255)

                                                                          tCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGccc               >  2:7528172/1‑93 (MQ=255)

                                                                           cccGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCa              >  1:9965016/1‑93 (MQ=255)

                                                                           cccGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCa              <  1:4587084/93‑1 (MQ=255)

                                                                             cggcggGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGa            >  2:3870917/1‑93 (MQ=255)

                                                                               gcggGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGaaa          >  1:1771751/1‑93 (MQ=255)

                                                                                cggGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAg         >  2:5739894/1‑93 (MQ=255)

                                                                                  ggTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGtt       >  2:8141580/1‑93 (MQ=255)

                                                                                  ggTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGtt       >  2:2595649/1‑93 (MQ=255)

                                                                                   gTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGttt      >  1:8787808/1‑93 (MQ=255)

                                                                                    ttgttGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTc     >  1:6499373/4‑93 (MQ=255)

                                                                                    ttATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTc     <  2:4147357/93‑1 (MQ=255)

                                                                                     tATTGTTTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTcc    <  2:5381422/93‑1 (MQ=255)

                                                                                     tATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTcc    >  1:6453036/1‑93 (MQ=255)

                                                                                     tATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTcc    <  1:2044970/93‑1 (MQ=255)

                                                                                     tATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTcc    <  1:1621636/93‑1 (MQ=255)

                                                                                     tATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTcc    <  1:3696486/93‑1 (MQ=255)

                                                                                     tATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTcc    <  2:9086259/93‑1 (MQ=255)

                                                                                     tATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTcc    <  2:4355617/93‑1 (MQ=255)

                                                                                      aTTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGCCTTTGCCAAAGCCCTACGCCCAGAACGTTTTCt   >  2:7314990/1‑93 (MQ=255)

                                                                                      aTTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCt   <  1:6189676/93‑1 (MQ=255)

CGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGCGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTG  >  NC_000913/4322792‑4322971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 210 total aligned reads displayed.

ACGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGCGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCCAG  >  NC_000913/4322791‑4322975

ACGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGT                                                                                              <  SRR4302540.1601758/94‑1 (MQ=60)

ACGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGT                                                                                              <  SRR4302540.8074377/94‑1 (MQ=60)

ACGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGT                                                                                              >  SRR4302540.777817/1‑94 (MQ=60)

 CGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTT                                                                                             <  SRR4302540.9525699/94‑1 (MQ=60)

 CGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTT                                                                                             <  SRR4302540.5293032/94‑1 (MQ=60)

  GATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTG                                                                                            >  SRR4302540.6591074/1‑94 (MQ=60)

  GATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTG                                                                                            <  SRR4302540.8012106/94‑1 (MQ=60)

  GATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTG                                                                                            <  SRR4302540.911655/94‑1 (MQ=60)

  GATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTG                                                                                            >  SRR4302540.9764988/1‑94 (MQ=60)

  GATTTAGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTG                                                                                            <  SRR4302540.3951791/94‑1 (MQ=60)

   ATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGG                                                                                           >  SRR4302540.6157434/1‑94 (MQ=60)

   ATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGG                                                                                           >  SRR4302540.7747468/1‑94 (MQ=60)

   ATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGG                                                                                           >  SRR4302540.4280379/1‑94 (MQ=60)

    TTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGT                                                                                          >  SRR4302540.1599170/1‑94 (MQ=60)

     TTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTT                                                                                         >  SRR4302540.6802276/1‑94 (MQ=60)

     TTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTT                                                                                         <  SRR4302540.4516063/94‑1 (MQ=60)

     TTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTT                                                                                         >  SRR4302540.49419/1‑94 (MQ=60)

       TGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGT                                                                                       <  SRR4302540.6236828/94‑1 (MQ=60)

       GGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGT                                                                                       <  SRR4302540.4056133/94‑1 (MQ=60)

       GGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGT                                                                                       >  SRR4302540.31481/1‑94 (MQ=60)

       GGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGT                                                                                       >  SRR4302540.1030550/1‑94 (MQ=60)

       GGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGT                                                                                       >  SRR4302540.9861016/1‑94 (MQ=60)

       GGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGGTGT                                                                                       >  SRR4302540.3915710/1‑94 (MQ=60)

        GTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTT                                                                                      <  SRR4302540.1894932/94‑1 (MQ=60)

        GTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTT                                                                                      <  SRR4302540.8078807/94‑1 (MQ=60)

        GTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTT                                                                                      <  SRR4302540.6032878/94‑1 (MQ=60)

           AATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTT                                                                                   <  SRR4302540.47352/94‑1 (MQ=60)

           AATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTT                                                                                   >  SRR4302540.3151068/1‑94 (MQ=60)

           AATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTT                                                                                   <  SRR4302540.186945/94‑1 (MQ=60)

            ATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTT                                                                                  >  SRR4302540.9393399/1‑94 (MQ=60)

            ATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTT                                                                                  <  SRR4302540.1941053/94‑1 (MQ=60)

             TTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTG                                                                                 >  SRR4302540.7786729/1‑94 (MQ=60)

              TAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGA                                                                                >  SRR4302540.9874872/1‑94 (MQ=60)

              TAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGA                                                                                >  SRR4302540.9363740/1‑94 (MQ=60)

              TAAAAGTGACTAACACATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGA                                                                                <  SRR4302540.8370156/94‑1 (MQ=60)

               AAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGAC                                                                               <  SRR4302540.2452358/94‑1 (MQ=60)

               AAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGAC                                                                               <  SRR4302540.2779115/94‑1 (MQ=60)

                AAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACG                                                                              <  SRR4302540.3146857/94‑1 (MQ=60)

                AAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACG                                                                              <  SRR4302540.447498/94‑1 (MQ=60)

                   GTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACA                                                                           <  SRR4302540.4118490/94‑1 (MQ=60)

                   GTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACA                                                                           <  SRR4302540.176542/94‑1 (MQ=60)

                   GTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACA                                                                           >  SRR4302540.6817938/1‑94 (MQ=60)

                    gtagTAACAGATGAAGAGTTAACGGTAATTCGATGACAGGGCGGCAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACAT                                                                          <  SRR4302540.4222412/90‑1 (MQ=60)

                    TGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACAT                                                                          <  SRR4302540.4222413/94‑1 (MQ=60)

                    TGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACAT                                                                          >  SRR4302540.962492/1‑94 (MQ=60)

                    TGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACAT                                                                          <  SRR4302540.1797782/94‑1 (MQ=60)

                    GGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACAT                                                                          <  SRR4302540.8972798/94‑1 (MQ=60)

                       CTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAA                                                                       <  SRR4302540.9711689/94‑1 (MQ=60)

                       CTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAA                                                                       >  SRR4302540.6099049/1‑94 (MQ=60)

                       CTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTACCGGCGGGTTATTGTGTTGGTTGTTGTATGACGACATTAA                                                                       >  SRR4302540.6099048/1‑94 (MQ=60)

                        TAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGACATTAAT                                                                      >  SRR4302540.9012449/1‑94 (MQ=60)

                         AACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATC                                                                     <  SRR4302540.302300/94‑1 (MQ=60)

                         AACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATC                                                                     >  SRR4302540.8146868/1‑94 (MQ=60)

                          ACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCA                                                                    <  SRR4302540.338627/94‑1 (MQ=60)

                          ACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCA                                                                    <  SRR4302540.6124711/94‑1 (MQ=60)

                          ACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCA                                                                    <  SRR4302540.9413782/94‑1 (MQ=60)

                          ACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCA                                                                    <  SRR4302540.2470614/94‑1 (MQ=60)

                           CAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCAT                                                                   <  SRR4302540.2585539/94‑1 (MQ=60)

                           CAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCAT                                                                   <  SRR4302540.6914201/94‑1 (MQ=60)

                            AGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATC                                                                  <  SRR4302540.1110188/94‑1 (MQ=60)

                            AGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATC                                                                  >  SRR4302540.7031557/1‑94 (MQ=60)

                            AGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGACATTAATCATC                                                                  >  SRR4302540.3846854/1‑94 (MQ=60)

                            AGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGCGTTGGTTGTTGTTTGACGACATTAATCATC                                                                  >  SRR4302540.1388760/1‑94 (MQ=60)

                             GATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCC                                                                 <  SRR4302540.4441424/94‑1 (MQ=60)

                             GATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCC                                                                 <  SRR4302540.4097707/94‑1 (MQ=60)

                             GATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCC                                                                 >  SRR4302540.7634274/1‑94 (MQ=60)

                             GATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCC                                                                 >  SRR4302540.2417467/1‑94 (MQ=60)

                             GATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCC                                                                 <  SRR4302540.9461784/94‑1 (MQ=60)

                             GATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTTTTTTGCGACATTAATtcttc                                                                 >  SRR4302540.2145840/1‑89 (MQ=60)

                               TGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCAC                                                               <  SRR4302540.521121/94‑1 (MQ=60)

                               TGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCAC                                                               <  SRR4302540.521120/94‑1 (MQ=60)

                               TGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCAC                                                               >  SRR4302540.5177907/1‑94 (MQ=60)

                               TGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCAC                                                               >  SRR4302540.6250050/1‑94 (MQ=60)

                               TGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCAC                                                               >  SRR4302540.5742405/1‑94 (MQ=60)

                                 AAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGG                                                             <  SRR4302540.5909103/94‑1 (MQ=60)

                                 AAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGG                                                             <  SRR4302540.1085009/94‑1 (MQ=60)

                                 AAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGG                                                             <  SRR4302540.5909104/94‑1 (MQ=60)

                                 AAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGG                                                             >  SRR4302540.676164/1‑94 (MQ=60)

                                  AGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGGCTCCCGGCGGGCTAGTGTGTTGGTTGTTGTTTGGCGACActtagtagccaatgt                                                            >  SRR4302540.9092554/1‑79 (MQ=60)

                                  AGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGT                                                            >  SRR4302540.8278019/1‑94 (MQ=60)

                                  AGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGT                                                            <  SRR4302540.9304588/94‑1 (MQ=60)

                                    AGTTAACTGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTAC                                                          <  SRR4302540.3264946/94‑1 (MQ=60)

                                    AGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTTACGACATTAATCATCCACGGTAC                                                          >  SRR4302540.3994870/1‑94 (MQ=60)

                                    AGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTAC                                                          <  SRR4302540.872413/94‑1 (MQ=60)

                                    AGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTAC                                                          <  SRR4302540.1976726/94‑1 (MQ=60)

                                    AGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTAC                                                          <  SRR4302540.270867/94‑1 (MQ=60)

                                    AGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTAC                                                          <  SRR4302540.8402933/94‑1 (MQ=60)

                                    AGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTTTCGGCATTAATCATCCACcggac                                                          >  SRR4302540.1875614/1‑89 (MQ=60)

                                     GTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG                                                         >  SRR4302540.2850917/1‑94 (MQ=60)

                                     GTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG                                                         >  SRR4302540.1172904/1‑94 (MQ=60)

                                     GTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG                                                         >  SRR4302540.952794/1‑94 (MQ=60)

                                     GTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACC                                                         >  SRR4302540.8210333/1‑94 (MQ=60)

                                     GTTAACGGGAAGTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTTTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG                                                         <  SRR4302540.8403856/94‑1 (MQ=60)

                                       TAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CC                                                      <  SRR4302540.971249/94‑1 (MQ=60)

                                        AACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGGCGACATTAATCATCCACGATACG‑CCA                                                     >  SRR4302540.5496896/1‑94 (MQ=60)

                                        AACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGCACG‑GCA                                                     >  SRR4302540.4180288/1‑94 (MQ=60)

                                        AACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCA                                                     >  SRR4302540.4180286/1‑94 (MQ=60)

                                         ACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAA                                                    >  SRR4302540.7096045/1‑94 (MQ=60)

                                          CGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAA                                                   <  SRR4302540.5211962/94‑1 (MQ=60)

                                          CGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAA                                                   <  SRR4302540.8215999/94‑1 (MQ=60)

                                          CGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAA                                                   >  SRR4302540.7004150/1‑94 (MQ=60)

                                           GGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAAT                                                  >  SRR4302540.1172241/1‑94 (MQ=60)

                                           GGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAAT                                                  >  SRR4302540.1430362/1‑94 (MQ=60)

                                           GGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAAT                                                  >  SRR4302540.1430361/1‑94 (MQ=60)

                                             GAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTT                                                <  SRR4302540.5503007/94‑1 (MQ=60)

                                             GAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTT                                                <  SRR4302540.9359640/94‑1 (MQ=60)

                                              AATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTA                                               >  SRR4302540.6530629/1‑94 (MQ=60)

                                              AATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTTTGTTGGTTGTTGTTTGACGACATTAATTCTCCACGGTACGCCCAAATTT                                                >  SRR4302540.1927266/1‑94 (MQ=60)

                                               ATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTAT                                              <  SRR4302540.8589408/94‑1 (MQ=60)

                                               ATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTAT                                              >  SRR4302540.865617/1‑94 (MQ=60)

                                               ATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTAT                                              >  SRR4302540.4845422/1‑94 (MQ=60)

                                                TTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTGTTGTGTTGGATGTTGTTTTCCGGCATTAATCATCCcctgatctcgcaatttatg                                              >  SRR4302540.1955331/1‑75 (MQ=54)

                                                TTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGGTATTGTGTTGGTTGTTGTTTTTAGACATTAATTATCCACGGTAAG‑CCCAATTTATT                                             >  SRR4302540.8983641/1‑94 (MQ=60)

                                                 TCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCG                                            <  SRR4302540.8132352/94‑1 (MQ=60)

                                                 TCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCG                                            <  SRR4302540.6390632/94‑1 (MQ=60)

                                                  CGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGG                                           <  SRR4302540.9473068/94‑1 (MQ=60)

                                                  CGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGG                                           <  SRR4302540.974658/94‑1 (MQ=60)

                                                   GATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGT                                          <  SRR4302540.8321016/94‑1 (MQ=60)

                                                   GATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGG                                          >  SRR4302540.3266499/1‑94 (MQ=60)

                                                    ATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTG                                         <  SRR4302540.2084710/94‑1 (MQ=60)

                                                    ATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTG                                         >  SRR4302540.5874450/1‑94 (MQ=60)

                                                     TGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGA                                        <  SRR4302540.8887506/94‑1 (MQ=60)

                                                      GACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGAC                                       <  SRR4302540.1012980/94‑1 (MQ=60)

                                                      GACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATAATCCACGGTACG‑CCAAATTTATCGGTGAC                                       >  SRR4302540.5052522/1‑94 (MQ=60)

                                                       ACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACT                                      <  SRR4302540.8525430/94‑1 (MQ=60)

                                                       ACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACT                                      <  SRR4302540.2850083/94‑1 (MQ=60)

                                                        CAGTGCGGGAGGGGGGTCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTT                                     <  SRR4302540.7075830/94‑1 (MQ=60)

                                                        CAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTT                                     <  SRR4302540.7075831/94‑1 (MQ=60)

                                                         AGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTT                                    >  SRR4302540.1795262/1‑94 (MQ=60)

                                                         AGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTT                                    >  SRR4302540.1323119/1‑94 (MQ=60)

                                                         AGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTT                                    <  SRR4302540.1163201/94‑1 (MQ=60)

                                                         AGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTG                                    >  SRR4302540.1795261/1‑94 (MQ=60)

                                                          GTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTG                                   >  SRR4302540.9888613/1‑94 (MQ=60)

                                                          GTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTG                                   >  SRR4302540.9888612/1‑94 (MQ=60)

                                                          GTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTG                                   >  SRR4302540.281913/1‑94 (MQ=60)

                                                             CGGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGGACG‑CCAAATTTATCGGTGACTTTGCCA                                >  SRR4302540.4185468/1‑94 (MQ=60)

                                                              GGGAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAA                               >  SRR4302540.2370980/1‑94 (MQ=60)

                                                                GAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAG                             <  SRR4302540.984985/94‑1 (MQ=60)

                                                                GAGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAC                             >  SRR4302540.8578886/1‑94 (MQ=60)

                                                                 AGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAATC                            >  SRR4302540.5433870/1‑94 (MQ=60)

                                                                 AGGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGC                            <  SRR4302540.737795/94‑1 (MQ=60)

                                                                  GGGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCC                           >  SRR4302540.1800769/1‑94 (MQ=60)

                                                                   GGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCA                          <  SRR4302540.10151863/94‑1 (MQ=60)

                                                                   GGCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCA                          <  SRR4302540.10151861/94‑1 (MQ=60)

                                                                    GCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCAT                         <  SRR4302540.4051952/94‑1 (MQ=60)

                                                                    GCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCAT                         <  SRR4302540.6448527/94‑1 (MQ=60)

                                                                    GCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCAT                         <  SRR4302540.2608441/94‑1 (MQ=60)

                                                                    GCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCAT                         <  SRR4302540.1858844/94‑1 (MQ=60)

                                                                    GCGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCAT                         <  SRR4302540.9257017/94‑1 (MQ=60)

                                                                    GCCGGCCTCCCGGTGGGTTATTGGGTTGGTTTGTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCAT                         <  SRR4302540.1858843/94‑1 (MQ=60)

                                                                     CGGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATG                        <  SRR4302540.9240119/94‑1 (MQ=60)

                                                                      GGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGC                       >  SRR4302540.5303880/1‑94 (MQ=60)

                                                                      GGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGC                       <  SRR4302540.67079/94‑1 (MQ=60)

                                                                      GGGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGC                       >  SRR4302540.1863059/1‑94 (MQ=60)

                                                                       GGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCG                      >  SRR4302540.7086516/1‑94 (MQ=60)

                                                                       GGCCTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCG                      >  SRR4302540.6239355/1‑94 (MQ=60)

                                                                          CTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCC                   >  SRR4302540.136194/1‑94 (MQ=60)

                                                                          CTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCC                   <  SRR4302540.8937332/94‑1 (MQ=60)

                                                                          CTCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCC                   >  SRR4302540.4307202/1‑94 (MQ=60)

                                                                           TCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCA                  >  SRR4302540.10081277/1‑94 (MQ=60)

                                                                           TCCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCA                  <  SRR4302540.6832722/94‑1 (MQ=60)

                                                                            CCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAG                 >  SRR4302540.1811433/1‑94 (MQ=60)

                                                                            CCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAG                 <  SRR4302540.4636486/94‑1 (MQ=60)

                                                                            CCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAG                 <  SRR4302540.7608102/94‑1 (MQ=60)

                                                                            CCCGGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAG                 >  SRR4302540.124175/1‑94 (MQ=60)

                                                                               GGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAA              >  SRR4302540.1790977/1‑94 (MQ=60)

                                                                               GGCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAA              >  SRR4302540.1790976/1‑94 (MQ=60)

                                                                                GCGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAG             >  SRR4302540.8529957/1‑94 (MQ=60)

                                                                                 CGGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGT            >  SRR4302540.256298/1‑94 (MQ=60)

                                                                                  GGGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTT           <  SRR4302540.566542/94‑1 (MQ=60)

                                                                                   GGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCTCCCAGAAAGTTT          >  SRR4302540.6113954/1‑94 (MQ=60)

                                                                                   GGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTT          <  SRR4302540.8145755/94‑1 (MQ=60)

                                                                                   GGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTT          >  SRR4302540.9377800/1‑94 (MQ=60)

                                                                                   GGTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTT          >  SRR4302540.8889495/1‑94 (MQ=60)

                                                                                    GTTGTTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTC         >  SRR4302540.6571635/1‑94 (MQ=60)

                                                                                    GTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTC         >  SRR4302540.6571634/1‑94 (MQ=60)

                                                                                    GTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTC         <  SRR4302540.2001322/94‑1 (MQ=60)

                                                                                    GTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTC         <  SRR4302540.7889427/94‑1 (MQ=60)

                                                                                    GTTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTC         >  SRR4302540.416958/1‑94 (MQ=60)

                                                                                     TTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCC        >  SRR4302540.6524863/1‑94 (MQ=60)

                                                                                     TTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCC        <  SRR4302540.4713423/94‑1 (MQ=60)

                                                                                     TTATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCC        <  SRR4302540.2256181/94‑1 (MQ=60)

                                                                                      TATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCT       >  SRR4302540.8171450/1‑94 (MQ=60)

                                                                                      TATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCT       <  SRR4302540.3736843/94‑1 (MQ=60)

                                                                                      TATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCT       >  SRR4302540.7102197/1‑94 (MQ=60)

                                                                                      TATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCT       >  SRR4302540.7102198/1‑94 (MQ=60)

                                                                                      TATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCT       <  SRR4302540.1639413/94‑1 (MQ=60)

                                                                                       ATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTG      >  SRR4302540.1888116/1‑94 (MQ=60)

                                                                                       ATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTG      <  SRR4302540.6258588/94‑1 (MQ=60)

                                                                                       ATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTG      <  SRR4302540.7385777/94‑1 (MQ=60)

                                                                                       ATTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGAGACTTTGCCAAAGCCATGCGTCCAGAAAGGTTCCTC      >  SRR4302540.5227466/1‑94 (MQ=60)

                                                                                       ATTGTGTTGGTTGTTGTTTGACGACATCAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTC      >  SRR4302540.5227468/1‑94 (MQ=60)

                                                                                        TTGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGC     <  SRR4302540.6327641/94‑1 (MQ=60)

                                                                                         TGTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCC    <  SRR4302540.6904249/94‑1 (MQ=60)

                                                                                          GTGTTGTTTGTTGTTTGACGACATTAATCATCGACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCCA   <  SRR4302540.1055414/94‑1 (MQ=60)

                                                                                          GTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCCA   <  SRR4302540.8013356/94‑1 (MQ=60)

                                                                                          GTGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCCA   <  SRR4302540.6277429/94‑1 (MQ=60)

                                                                                           TGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCCCG  >  SRR4302540.2819982/1‑94 (MQ=60)

                                                                                           TGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCCAG  >  SRR4302540.7741405/1‑94 (MQ=60)

                                                                                           TGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCCAG  >  SRR4302540.4895096/1‑94 (MQ=60)

ACGATTTGGTTAATTAAAAGTGACTAACAGATGAAGAGTTAACGGGAATTCGATGACAGTGCGGGAGGGCGGGCCTCCCGGCGGGTTATTGCGTTGGTTGTTGTTTGACGACATTAATCATCCACGGTACG‑CCAAATTTATCGGTGACTTTGCCAAAGCCATGCGCCCAGAAAGTTTCCTGCCAG  >  NC_000913/4322791‑4322975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`