Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,328,807	A→G	Q243R (CAG→CGG)	proP →	proline permease II

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,328,807	0	A	G	100.0%	1201.2 / NA	371	Q243R (CAG→CGG)	proP	proline permease II
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (195/176); total (195/176)

Only 100 of 383 total aligned reads displayed.

TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACG  >  NC_000913/4328717‑4328896

tCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCggg                                                                                         >  1:9518206/1‑93 (MQ=255)

  gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATCAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAt                                                                                       >  2:9530386/1‑93 (MQ=255)

   ggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg                                                                                      >  1:521701/1‑93 (MQ=255)

   ggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg                                                                                      >  1:5012002/1‑93 (MQ=255)

   ggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg                                                                                      >  2:8091427/1‑93 (MQ=255)

    gCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGATCAGGGCGACCGTGAAGGATTGCGGGATgg                                                                                     >  1:3920847/1‑93 (MQ=255)

    gCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATgg                                                                                     <  1:6613800/93‑1 (MQ=255)

    gCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATgg                                                                                     <  1:9137626/93‑1 (MQ=255)

    gCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATgg                                                                                     <  1:5956030/93‑1 (MQ=255)

      tttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGcc                                                                                   <  2:7265293/93‑1 (MQ=255)

       ttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGccc                                                                                  <  2:7754048/93‑1 (MQ=255)

       ttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGccc                                                                                  <  1:8769734/93‑1 (MQ=255)

        tACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCg                                                                                 >  1:1925075/1‑93 (MQ=255)

          ccTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaa                                                                               >  1:4810122/1‑93 (MQ=255)

           cTGCGCCATGCCTTCGAAGAGCCTCCGGCGTACCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaaa                                                                              <  2:6790664/93‑1 (MQ=255)

              cgcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtc                                                                           <  2:3937299/93‑1 (MQ=255)

                ccATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtctc                                                                         >  1:3069118/1‑93 (MQ=255)

                ccATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtctc                                                                         <  1:6980605/93‑1 (MQ=255)

                ccATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtctc                                                                         <  2:331746/93‑1 (MQ=255)

                ccATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtctc                                                                         >  2:6053043/1‑93 (MQ=255)

                   tGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGtt                                                                      >  1:6793229/1‑93 (MQ=255)

                   tGCGCTGGAAGAGACTCCGGCGTTCCAGAAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGtt                                                                      <  1:3313380/93‑1 (MQ=255)

                    gcgcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGttt                                                                     >  1:9165875/1‑93 (MQ=255)

                     cgcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTa                                                                    <  2:3706340/93‑1 (MQ=255)

                       cTGGAAGAGCCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa                                                                  <  1:2717342/93‑1 (MQ=255)

                       cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa                                                                  <  2:1865585/93‑1 (MQ=255)

                       cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa                                                                  <  2:9635871/93‑1 (MQ=255)

                        tGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAag                                                                 <  2:7960802/93‑1 (MQ=255)

                           aaGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAgaga                                                              <  2:9855581/93‑1 (MQ=255)

                            agagACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAt                                                             <  2:6885823/93‑1 (MQ=255)

                              agaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTg                                                           >  1:5697084/1‑93 (MQ=255)

                                 cTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCa                                                        <  1:9333807/93‑1 (MQ=255)

                                 cTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCa                                                        <  2:7476083/93‑1 (MQ=255)

                                  tCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAc                                                       <  1:1583400/93‑1 (MQ=255)

                                   ccGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACt                                                      >  1:2942006/1‑93 (MQ=255)

                                   ccGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGCCTCGTTTAAAGAGATTGCCACt                                                      >  2:1487920/1‑93 (MQ=255)

                                    cGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTa                                                     >  2:7195130/1‑93 (MQ=255)

                                      gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa                                                   <  1:3624371/93‑1 (MQ=255)

                                      gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa                                                   >  1:7059514/1‑93 (MQ=255)

                                      gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa                                                   <  1:1821868/93‑1 (MQ=255)

                                       cGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAt                                                  <  2:1683776/93‑1 (MQ=255)

                                        gtgccAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATa                                                 <  1:6905812/90‑1 (MQ=255)

                                        gTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATa                                                 <  2:4241750/93‑1 (MQ=255)

                                         ttCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAc                                                >  2:896438/1‑93 (MQ=255)

                                          tCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACt                                               <  2:4059182/93‑1 (MQ=255)

                                           ccAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTg                                              <  1:6162334/93‑1 (MQ=255)

                                            cagcagCATGTCGATAAACTGGAACAGAGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTgg                                             <  1:5443612/93‑1 (MQ=255)

                                              gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg                                           <  2:9812467/93‑1 (MQ=255)

                                              gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg                                           >  2:2206376/1‑93 (MQ=255)

                                               cagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcgc                                          <  1:7885752/93‑1 (MQ=255)

                                                 gcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAg                                        >  1:7148272/1‑93 (MQ=255)

                                                  caTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGc                                       >  2:9217963/1‑93 (MQ=255)

                                                   aTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGcc                                      >  2:5201624/1‑93 (MQ=255)

                                                   aTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGcc                                      <  1:600722/93‑1 (MQ=255)

                                                    tGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCt                                     >  2:6554372/1‑93 (MQ=255)

                                                    tGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCt                                     >  1:1193350/1‑93 (MQ=255)

                                                    tGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCt                                     <  2:2972907/93‑1 (MQ=255)

                                                    tGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCt                                     >  1:1054279/1‑93 (MQ=255)

                                                    tGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCt                                     >  1:6699463/1‑93 (MQ=255)

                                                      tCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGt                                   <  2:1008991/93‑1 (MQ=255)

                                                      gggATAAACTGGAACAGGGCGGCCGTGTAGGTGTTCGGGAGGGCCCGAAAGTCTCGTTTAAAGACAGTGCCATTAAATACTGGCGCAGCCTGt                                   <  1:7541540/91‑1 (MQ=255)

                                                       cGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGtt                                  <  1:2558306/93‑1 (MQ=255)

                                                       cGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGtt                                  <  1:4431446/93‑1 (MQ=255)

                                                         aTAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGa                                <  2:3866917/93‑1 (MQ=255)

                                                         aTAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGa                                >  2:8595831/1‑93 (MQ=255)

                                                           aaaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACa                              <  2:7858804/93‑1 (MQ=255)

                                                           aaaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACa                              <  1:2982624/93‑1 (MQ=255)

                                                           aaaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACa                              >  2:5358546/1‑93 (MQ=255)

                                                              cTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGGTTGCCACTAAATACTGGCGCAGCCTGTTGACgtgt                           >  1:1144868/1‑93 (MQ=255)

                                                               tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa                          >  1:3397463/1‑93 (MQ=255)

                                                               tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa                          >  2:8280125/1‑93 (MQ=255)

                                                               tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa                          <  2:6431386/93‑1 (MQ=255)

                                                                ggAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAt                         >  2:580302/1‑93 (MQ=255)

                                                                gcaaCAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAt                         <  1:2114193/91‑1 (MQ=255)

                                                                 gAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAtt                        >  1:3547978/1‑93 (MQ=255)

                                                                 gAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAtt                        <  1:1543664/93‑1 (MQ=255)

                                                                  aaCAGGGCGAGCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTg                       <  2:6650722/93‑1 (MQ=255)

                                                                  aaCAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGCAAGTCTCGTTTAAAGAGATTGCCACTACATACTGGCGCAGCCTGTTGACATGTATTg                       >  1:9849464/1‑93 (MQ=255)

                                                                  aaCAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTg                       <  1:8646364/93‑1 (MQ=255)

                                                                   aCAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTgg                      >  2:4672218/1‑93 (MQ=255)

                                                                     aGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTc                    <  2:2439392/93‑1 (MQ=255)

                                                                     aGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTc                    >  2:7070971/1‑93 (MQ=255)

                                                                      gggCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCt                   >  1:6285874/1‑93 (MQ=255)

                                                                      gggCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCt                   >  1:8128205/1‑93 (MQ=255)

                                                                      gggCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCt                   <  1:2299588/93‑1 (MQ=255)

                                                                            ccGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAt             >  2:5664124/1‑93 (MQ=255)

                                                                             cGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAtt            >  2:4408756/1‑93 (MQ=255)

                                                                             cGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAtt            <  1:4727387/93‑1 (MQ=255)

                                                                               tGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGc          >  1:959938/1‑93 (MQ=255)

                                                                                gAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcc         <  1:835603/93‑1 (MQ=255)

                                                                                gAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcc         <  2:6261114/93‑1 (MQ=255)

                                                                                gAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcc         <  1:2817422/93‑1 (MQ=255)

                                                                                gAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcc         >  2:4890310/1‑93 (MQ=255)

                                                                                 aaGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcca        <  1:9777749/93‑1 (MQ=255)

                                                                                   ggTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGTCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGccacc      >  1:4143633/1‑93 (MQ=255)

                                                                                   ggTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGccacc      >  2:8410698/1‑93 (MQ=255)

                                                                                   ggTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGccacc      >  1:4398352/1‑93 (MQ=255)

                                                                                    gTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTTACATGTATTGGTCTGGTAATTGccacca     >  2:4746578/1‑93 (MQ=255)

                                                                                      ttGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAc   <  2:1312962/93‑1 (MQ=255)

                                                                                       tGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACg  <  1:7975843/93‑1 (MQ=255)

TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACG  >  NC_000913/4328717‑4328896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 217 total aligned reads displayed.

TATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC  >  NC_000913/4328715‑4328900

TATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGG                                                                                              >  SRR4302540.5048310/1‑94 (MQ=60)

TATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGG                                                                                              >  SRR4302540.1249326/1‑94 (MQ=60)

 ATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGG                                                                                             >  SRR4302540.9630929/1‑94 (MQ=60)

 ATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGG                                                                                             <  SRR4302540.2062609/94‑1 (MQ=60)

 ATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGG                                                                                             <  SRR4302540.3476046/94‑1 (MQ=60)

 ATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGG                                                                                             >  SRR4302540.3555254/1‑94 (MQ=60)

  TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGA                                                                                            <  SRR4302540.714059/94‑1 (MQ=60)

   CGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAT                                                                                           >  SRR4302540.142473/1‑94 (MQ=60)

    GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          <  SRR4302540.9487766/94‑1 (MQ=60)

    GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          >  SRR4302540.5066267/1‑94 (MQ=60)

    GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          >  SRR4302540.5066272/1‑94 (MQ=60)

    GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          >  SRR4302540.527306/1‑94 (MQ=60)

    GGACTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          <  SRR4302540.1996570/94‑1 (MQ=60)

     GGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGATCAGGGCGACCGTGAAGGATTGCGGGATGG                                                                                         >  SRR4302540.3963281/1‑94 (MQ=60)

     GGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGG                                                                                         <  SRR4302540.6933685/94‑1 (MQ=60)

     GGCTGTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTGCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGG                                                                                         <  SRR4302540.6933684/94‑1 (MQ=60)

      GCTTTACCTGCGCCATGCGCTGGAAGAGGCTGCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC                                                                                        <  SRR4302540.6021903/94‑1 (MQ=60)

      GCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC                                                                                        <  SRR4302540.5318564/94‑1 (MQ=60)

      GCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC                                                                                        <  SRR4302540.6021902/94‑1 (MQ=60)

      GCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC                                                                                        <  SRR4302540.6687055/94‑1 (MQ=60)

      GCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC                                                                                        <  SRR4302540.6687058/94‑1 (MQ=60)

      GCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC                                                                                        <  SRR4302540.9247423/94‑1 (MQ=60)

       CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC                                                                                       >  SRR4302540.1423683/1‑94 (MQ=60)

        TTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCG                                                                                      >  SRR4302540.3007502/1‑94 (MQ=60)

        TTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCC                                                                                      >  SRR4302540.10066459/1‑94 (MQ=60)

         TTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCG                                                                                     <  SRR4302540.8871370/94‑1 (MQ=60)

         TTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCG                                                                                     >  SRR4302540.1946061/1‑94 (MQ=60)

           ACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAA                                                                                   >  SRR4302540.4861605/1‑94 (MQ=60)

            CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA                                                                                  <  SRR4302540.8276408/94‑1 (MQ=60)

            CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA                                                                                  >  SRR4302540.9307826/1‑94 (MQ=60)

            CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA                                                                                  <  SRR4302540.8276406/94‑1 (MQ=60)

              TGGGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGT                                                                                <  SRR4302540.2069246/94‑1 (MQ=60)

                 GCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTC                                                                             >  SRR4302540.3102791/1‑94 (MQ=60)

                 GCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTC                                                                             >  SRR4302540.3542216/1‑94 (MQ=60)

                 GCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTC                                                                             <  SRR4302540.4738717/94‑1 (MQ=60)

                  CCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCG                                                                            <  SRR4302540.2674944/94‑1 (MQ=60)

                  CCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCG                                                                            >  SRR4302540.8490844/1‑94 (MQ=60)

                  CCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCG                                                                            <  SRR4302540.7058148/94‑1 (MQ=60)

                  CCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCG                                                                            >  SRR4302540.2963013/1‑94 (MQ=60)

                    ATGCGCTGGAAGAGACTCCGTCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGATGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302540.5463881/1‑94 (MQ=60)

                    ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302540.4400437/1‑94 (MQ=60)

                    ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302540.4031706/1‑94 (MQ=60)

                    ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302540.2531730/1‑94 (MQ=60)

                    ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302540.535868/1‑94 (MQ=60)

                    ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302540.6868360/1‑94 (MQ=60)

                    ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302540.7099731/1‑94 (MQ=60)

                     TGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTT                                                                         <  SRR4302540.3349688/94‑1 (MQ=60)

                     TGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTT                                                                         >  SRR4302540.9275852/1‑94 (MQ=60)

                     TGCGCTGGAAGAGACTCCGGCGTTCCAGAAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTT                                                                         <  SRR4302540.3349687/94‑1 (MQ=60)

                       CGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAA                                                                       >  SRR4302540.1179972/1‑94 (MQ=60)

                         CTGGAAGAGCCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG                                                                     <  SRR4302540.2746642/94‑1 (MQ=60)

                         CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG                                                                     >  SRR4302540.4353941/1‑94 (MQ=60)

                         CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG                                                                     >  SRR4302540.2826261/1‑94 (MQ=60)

                          TGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGA                                                                    <  SRR4302540.3018846/94‑1 (MQ=60)

                           GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG                                                                   >  SRR4302540.5311223/1‑94 (MQ=60)

                           GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG                                                                   >  SRR4302540.3647992/1‑94 (MQ=60)

                           GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG                                                                   >  SRR4302540.3647991/1‑94 (MQ=60)

                           GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG                                                                   <  SRR4302540.2758029/94‑1 (MQ=60)

                            GAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGA                                                                  >  SRR4302540.7063282/1‑94 (MQ=60)

                              AGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT                                                                >  SRR4302540.4077741/1‑94 (MQ=60)

                              AGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT                                                                <  SRR4302540.7046341/94‑1 (MQ=60)

                              AGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT                                                                <  SRR4302540.3830930/94‑1 (MQ=60)

                              AGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT                                                                >  SRR4302540.8094079/1‑94 (MQ=60)

                               GAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTG                                                               <  SRR4302540.6140754/94‑1 (MQ=60)

                               GAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTG                                                               <  SRR4302540.9745752/94‑1 (MQ=60)

                               GAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTG                                                               >  SRR4302540.5759809/1‑94 (MQ=60)

                                  ACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAgagcgagtgccc                                                            >  SRR4302540.2163770/1‑82 (MQ=60)

                                  ACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCA                                                            >  SRR4302540.2179506/1‑94 (MQ=60)

                                   CTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAC                                                           <  SRR4302540.9445088/94‑1 (MQ=60)

                                   CTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAC                                                           >  SRR4302540.7496905/1‑94 (MQ=60)

                                    TCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACT                                                          >  SRR4302540.2726159/1‑94 (MQ=60)

                                    TCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACT                                                          >  SRR4302540.2974331/1‑94 (MQ=60)

                                    TCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACT                                                          <  SRR4302540.1600699/94‑1 (MQ=60)

                                     CCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTA                                                         >  SRR4302540.6733545/1‑94 (MQ=60)

                                     CCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCAACTA                                                         >  SRR4302540.8454375/1‑94 (MQ=60)

                                      CGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAA                                                        >  SRR4302540.2818070/1‑94 (MQ=60)

                                       GGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAT                                                       >  SRR4302540.5944594/1‑94 (MQ=60)

                                       GGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAA                                                       >  SRR4302540.7138028/1‑94 (MQ=60)

                                       GGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAA                                                       <  SRR4302540.9947536/94‑1 (MQ=60)

                                        GCGTTCCAGCAGCATGTCGATAACCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAT                                                      <  SRR4302540.1841775/94‑1 (MQ=60)

                                        GCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAT                                                      >  SRR4302540.3672168/1‑94 (MQ=60)

                                        GCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAT                                                      <  SRR4302540.4944667/94‑1 (MQ=60)

                                        GCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAT                                                      <  SRR4302540.1841776/94‑1 (MQ=60)

                                         CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATA                                                     >  SRR4302540.7981/1‑94 (MQ=60)

                                         CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATA                                                     >  SRR4302540.309372/1‑94 (MQ=60)

                                          GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    >  SRR4302540.764230/1‑94 (MQ=60)

                                          GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    >  SRR4302540.7017327/1‑94 (MQ=60)

                                          GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    <  SRR4302540.6644961/94‑1 (MQ=60)

                                          GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    >  SRR4302540.176787/1‑94 (MQ=60)

                                          GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    <  SRR4302540.6644963/94‑1 (MQ=60)

                                          GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    >  SRR4302540.3006745/1‑94 (MQ=60)

                                          GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGGTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    >  SRR4302540.764232/1‑94 (MQ=60)

                                          GTGCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    <  SRR4302540.6982599/94‑1 (MQ=60)

                                           TTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACT                                                   >  SRR4302540.8727248/1‑94 (MQ=60)

                                            TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG                                                  <  SRR4302540.9263502/94‑1 (MQ=60)

                                            TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG                                                  <  SRR4302540.9464020/94‑1 (MQ=60)

                                            TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGCTTAAAGAGATTGCCACTAAATACTG                                                  <  SRR4302540.559825/94‑1 (MQ=60)

                                             CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG                                                 <  SRR4302540.6231312/94‑1 (MQ=60)

                                             CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG                                                 <  SRR4302540.6231003/94‑1 (MQ=60)

                                             CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG                                                 <  SRR4302540.9671798/94‑1 (MQ=60)

                                             CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG                                                 <  SRR4302540.8759692/94‑1 (MQ=60)

                                              CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC                                                <  SRR4302540.4517466/94‑1 (MQ=60)

                                              CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC                                                <  SRR4302540.6726016/94‑1 (MQ=60)

                                              CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC                                                <  SRR4302540.2643876/94‑1 (MQ=60)

                                              CAGCAGCATGTCGATAAACTGGAACAGAGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC                                                <  SRR4302540.5503509/94‑1 (MQ=60)

                                               AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG                                               >  SRR4302540.9342328/1‑94 (MQ=60)

                                                GCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGC                                              >  SRR4302540.4837769/1‑94 (MQ=60)

                                                 CAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCA                                             >  SRR4302540.1588174/1‑94 (MQ=60)

                                                 CAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCA                                             <  SRR4302540.7977814/94‑1 (MQ=60)

                                                 CAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCA                                             <  SRR4302540.3060920/94‑1 (MQ=60)

                                                  AGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAG                                            >  SRR4302540.8976824/1‑94 (MQ=60)

                                                  AGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAG                                            >  SRR4302540.7227927/1‑94 (MQ=60)

                                                  AGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAG                                            <  SRR4302540.1147108/94‑1 (MQ=60)

                                                  AGCATGTCGATAAACTGGAACAGGGCGACCGGGAACGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCTCAG                                            <  SRR4302540.1147109/94‑1 (MQ=60)

                                                     ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT                                         >  SRR4302540.1065011/1‑94 (MQ=60)

                                                     ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT                                         <  SRR4302540.6322165/94‑1 (MQ=60)

                                                     ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT                                         >  SRR4302540.6321052/1‑94 (MQ=60)

                                                     ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT                                         <  SRR4302540.9949394/94‑1 (MQ=60)

                                                     ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT                                         >  SRR4302540.1205647/1‑94 (MQ=60)

                                                     ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT                                         <  SRR4302540.607161/94‑1 (MQ=60)

                                                     ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT                                         >  SRR4302540.4899090/1‑94 (MQ=60)

                                                     ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT                                         <  SRR4302540.5156810/94‑1 (MQ=60)

                                                      TGTCGATAAACTGGATCAGGGCGGCCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCTCTAAATACTGGCGCAGCCTG                                        >  SRR4302540.8759126/1‑94 (MQ=60)

                                                      TGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTG                                        >  SRR4302540.6045613/1‑94 (MQ=60)

                                                      TGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTG                                        >  SRR4302540.982143/1‑94 (MQ=60)

                                                       GTCGATAAAGTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGT                                       <  SRR4302540.4043015/94‑1 (MQ=60)

                                                       GTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGT                                       >  SRR4302540.8165268/1‑94 (MQ=60)

                                                        TCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTATAGAGATTGCCACTAAATACTGGCGCAGCCTGTT                                      >  SRR4302540.9831473/1‑94 (MQ=60)

                                                        TCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTT                                      <  SRR4302540.3431476/94‑1 (MQ=60)

                                                         CGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTG                                     <  SRR4302540.4479457/94‑1 (MQ=60)

                                                         CGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTG                                     <  SRR4302540.2585877/94‑1 (MQ=60)

                                                         CGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTG                                     <  SRR4302540.3012348/94‑1 (MQ=60)

                                                           ATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAC                                   <  SRR4302540.9678876/94‑1 (MQ=60)

                                                            TAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACA                                  >  SRR4302540.878006/1‑94 (MQ=60)

                                                            TAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACA                                  <  SRR4302540.2484268/94‑1 (MQ=60)

                                                             AAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAT                                 <  SRR4302540.3015546/94‑1 (MQ=60)

                                                             AAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAT                                 >  SRR4302540.7203274/1‑94 (MQ=60)

                                                             AAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAT                                 <  SRR4302540.7204549/94‑1 (MQ=60)

                                                              AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                <  SRR4302540.3122223/94‑1 (MQ=60)

                                                              AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                <  SRR4302540.703987/94‑1 (MQ=60)

                                                              AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                <  SRR4302540.4853483/94‑1 (MQ=60)

                                                              AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                >  SRR4302540.2321690/1‑94 (MQ=60)

                                                               ACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGGTTGCCACTAAATACTGGCGCAGCCTGTTGACGTGT                               >  SRR4302540.1156826/1‑94 (MQ=60)

                                                               ACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGT                               <  SRR4302540.9658796/94‑1 (MQ=60)

                                                                CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA                              >  SRR4302540.936642/1‑94 (MQ=60)

                                                                CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA                              >  SRR4302540.3434513/1‑94 (MQ=60)

                                                                CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA                              >  SRR4302540.5860796/1‑94 (MQ=60)

                                                                 TGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAT                             >  SRR4302540.1159329/1‑94 (MQ=60)

                                                                  GGAGCAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT                            <  SRR4302540.8004616/94‑1 (MQ=60)

                                                                  GGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT                            >  SRR4302540.3586736/1‑94 (MQ=60)

                                                                  GCAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT                            <  SRR4302540.2136884/94‑1 (MQ=60)

                                                                   GAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTG                           <  SRR4302540.1560710/94‑1 (MQ=60)

                                                                   GAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTG                           >  SRR4302540.4645808/1‑94 (MQ=60)

                                                                    AACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGG                          >  SRR4302540.4352218/1‑94 (MQ=60)

                                                                    AACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGG                          <  SRR4302540.8746805/94‑1 (MQ=60)

                                                                    AACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGG                          <  SRR4302540.10010980/94‑1 (MQ=60)

                                                                     ACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGT                         <  SRR4302540.8098710/94‑1 (MQ=60)

                                                                       AGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCT                       >  SRR4302540.8222547/1‑94 (MQ=60)

                                                                       AGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCT                       >  SRR4302540.684564/1‑94 (MQ=60)

                                                                       AGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCT                       >  SRR4302540.158933/1‑94 (MQ=60)

                                                                       AGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCT                       >  SRR4302540.6355832/1‑94 (MQ=60)

                                                                        GGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTG                      <  SRR4302540.2324323/94‑1 (MQ=60)

                                                                            GACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAA                  <  SRR4302540.8866333/94‑1 (MQ=60)

                                                                             ACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAT                 >  SRR4302540.3799962/1‑94 (MQ=60)

                                                                              CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT                <  SRR4302540.6119871/94‑1 (MQ=60)

                                                                              CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT                <  SRR4302540.9274639/94‑1 (MQ=60)

                                                                              CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT                <  SRR4302540.3207002/94‑1 (MQ=60)

                                                                              CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT                <  SRR4302540.2090521/94‑1 (MQ=60)

                                                                               CGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTG               >  SRR4302540.9152035/1‑94 (MQ=60)

                                                                               CGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTG               <  SRR4302540.4777875/94‑1 (MQ=60)

                                                                               CGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGCTGACATGTATTGGTCTGGTAATTG               >  SRR4302540.7922472/1‑94 (MQ=60)

                                                                                GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC              >  SRR4302540.969874/1‑94 (MQ=60)

                                                                                GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC              >  SRR4302540.7603288/1‑94 (MQ=60)

                                                                                GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC              >  SRR4302540.5894286/1‑94 (MQ=60)

                                                                                GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC              >  SRR4302540.3474680/1‑94 (MQ=60)

                                                                                GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC              >  SRR4302540.5603159/1‑94 (MQ=60)

                                                                                GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC              >  SRR4302540.1780257/1‑94 (MQ=60)

                                                                                GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC              >  SRR4302540.1205359/1‑94 (MQ=60)

                                                                                 TGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCC             >  SRR4302540.7410043/1‑94 (MQ=60)

                                                                                 TGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCC             >  SRR4302540.1915459/1‑94 (MQ=60)

                                                                                  GAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCA            <  SRR4302540.2847864/94‑1 (MQ=60)

                                                                                  GAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCA            >  SRR4302540.679181/1‑94 (MQ=60)

                                                                                  GAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCA            <  SRR4302540.3373807/94‑1 (MQ=60)

                                                                                  GAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCA            <  SRR4302540.844474/94‑1 (MQ=60)

                                                                                   AAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCAC           <  SRR4302540.9892362/94‑1 (MQ=60)

                                                                                   AAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCAC           <  SRR4302540.1578903/94‑1 (MQ=60)

                                                                                    AGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGTCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACC          >  SRR4302540.4188473/1‑94 (MQ=60)

                                                                                    AGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACC          >  SRR4302540.6803039/1‑94 (MQ=60)

                                                                                    AGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACC          >  SRR4302540.4446058/1‑94 (MQ=60)

                                                                                     GGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCA         <  SRR4302540.4451490/94‑1 (MQ=60)

                                                                                     GGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCA         <  SRR4302540.4451489/94‑1 (MQ=60)

                                                                                     GGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCA         <  SRR4302540.6537386/94‑1 (MQ=60)

                                                                                      GTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAA        >  SRR4302540.5120858/1‑94 (MQ=60)

                                                                                         TGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGT     <  SRR4302540.8068760/94‑1 (MQ=60)

                                                                                          GCGGGATGGCCCGAAAGTCTNNTNTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTG    <  SRR4302540.1960175/94‑1 (MQ=60)

                                                                                          GCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTG    <  SRR4302540.1652706/94‑1 (MQ=60)

                                                                                           CGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGA   >  SRR4302540.7695093/1‑94 (MQ=60)

                                                                                           CGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGA   >  SRR4302540.7364112/1‑94 (MQ=60)

                                                                                           CGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGAAGCCTGGTGACAGGTATTGTTCTGGTAATTGCCACCAccaaac   >  SRR4302540.7364110/1‑88 (MQ=60)

                                                                                            GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC  >  SRR4302540.100715/1‑94 (MQ=60)

TATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC  >  NC_000913/4328715‑4328900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`