Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,328,807 |
A→G |
Q243R (CAG→CGG) |
proP → |
proline permease II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,328,807 | 0 | A | G | 100.0%
| 723.4
/ NA
| 224 | Q243R (CAG→CGG) | proP | proline permease II |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (103/121); total (103/121) |
Only 100 of 229 total aligned reads displayed.
TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAA > NC_000913/4328717‑4328894
|
gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAt < 1:3887126/93‑1 (MQ=255)
ggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg < 2:4791850/93‑1 (MQ=255)
gCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATgg > 1:3261086/1‑93 (MQ=255)
cTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGc < 1:1119600/93‑1 (MQ=255)
cTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGc > 1:685811/1‑93 (MQ=255)
cTTTACCTGCGCCATGCAATGGAAAAGAATCCGGCGAACCGGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGc < 2:6304360/93‑1 (MQ=255)
tttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGcc > 1:5726548/1‑93 (MQ=255)
ttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGccc > 1:1617268/1‑93 (MQ=255)
tACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCg > 1:1314314/1‑93 (MQ=255)
ccTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaa > 2:6249686/1‑93 (MQ=255)
gcgcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGTACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGt < 1:4554773/93‑1 (MQ=255)
cgcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtc < 1:856080/93‑1 (MQ=255)
cgcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtc < 1:3014495/93‑1 (MQ=255)
gcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtct < 2:1802004/93‑1 (MQ=255)
gcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtct > 2:5581517/1‑93 (MQ=255)
cccATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtct < 1:4056105/92‑1 (MQ=255)
cATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCg > 2:2929634/1‑93 (MQ=255)
aTGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGt < 1:5521731/93‑1 (MQ=255)
tGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGtt > 2:5183759/1‑93 (MQ=255)
tGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGtt < 2:5358223/93‑1 (MQ=255)
gcgcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGttt < 2:4320507/93‑1 (MQ=255)
cgcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTa > 1:2874784/1‑93 (MQ=255)
cgcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTa > 1:196041/1‑93 (MQ=255)
cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGTTGGCCCGAAAGTCTCGTTTaaa > 1:1995666/1‑93 (MQ=255)
cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa < 1:4727600/93‑1 (MQ=255)
cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa < 1:3444673/93‑1 (MQ=255)
cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa > 1:710715/1‑93 (MQ=255)
cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa > 1:362944/1‑93 (MQ=255)
cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa > 2:6258110/1‑93 (MQ=255)
tGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAag > 1:1058100/1‑93 (MQ=255)
ggAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAaga < 2:4006881/93‑1 (MQ=255)
ggAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAaga < 1:209383/93‑1 (MQ=255)
gagcCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAtt < 2:251061/93‑1 (MQ=255)
gagaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAtt > 1:1468768/1‑93 (MQ=255)
agaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTg < 2:2021911/93‑1 (MQ=255)
gaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGc < 1:75382/93‑1 (MQ=255)
gaCTCCGGCGCTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAACGTCTCGTTTTAAGAGATTGc > 2:6139505/1‑93 (MQ=255)
aCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGcc > 2:3714614/1‑93 (MQ=255)
aCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGcc < 2:921771/93‑1 (MQ=255)
aCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGcc < 1:6150374/93‑1 (MQ=255)
aCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGcc < 1:2415994/93‑1 (MQ=255)
tCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAc > 2:4152043/1‑93 (MQ=255)
tCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAc < 1:1517915/93‑1 (MQ=255)
tCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAc > 2:3394850/1‑93 (MQ=255)
ccGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACt > 1:5096352/1‑93 (MQ=255)
gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa < 2:328328/93‑1 (MQ=255)
gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa < 2:4401064/93‑1 (MQ=255)
gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa < 2:351532/93‑1 (MQ=255)
gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa > 2:974384/1‑93 (MQ=255)
gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa > 1:2670120/1‑93 (MQ=255)
gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa > 1:4196356/1‑93 (MQ=255)
cGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAt < 2:3137436/93‑1 (MQ=255)
gTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATa > 2:234469/1‑93 (MQ=255)
ttCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAc > 1:2765781/1‑93 (MQ=255)
ttCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAc > 2:4634868/1‑93 (MQ=255)
ttCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAc < 2:303745/93‑1 (MQ=255)
ccAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTg < 2:115070/93‑1 (MQ=255)
ccAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTg > 2:2246976/1‑93 (MQ=255)
ccAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTg > 1:6046173/1‑93 (MQ=255)
ccAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTg < 1:4304652/93‑1 (MQ=255)
cagcagCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCCTTTAAAGAGATTGCCACTAAATACTgg < 2:531119/93‑1 (MQ=255)
agcagcATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgc > 2:5472259/1‑93 (MQ=255)
gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg > 1:4454285/1‑93 (MQ=255)
gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg < 2:3070404/93‑1 (MQ=255)
gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg > 1:393088/1‑93 (MQ=255)
gcagcaTGTCGATAAACTGGAAAAGGGCGACCGTGAAGGGTTGCGGGAGGGCCCGAAAGAGTCGTTTAAAGAGAATGCCACTAAATACTGgcg > 2:1429008/1‑93 (MQ=255)
agcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCa > 2:5664307/1‑93 (MQ=255)
gcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAg > 2:587993/1‑93 (MQ=255)
aTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGcc < 2:4937994/93‑1 (MQ=255)
tGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCt > 1:2020894/1‑93 (MQ=255)
tGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCt > 1:3102079/1‑93 (MQ=255)
gTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTg < 1:4796448/93‑1 (MQ=255)
gTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTg < 1:562344/93‑1 (MQ=255)
cGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGtt < 2:5823475/93‑1 (MQ=255)
aTAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGa > 2:1888821/1‑93 (MQ=255)
tAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAc > 1:1379261/1‑93 (MQ=255)
tAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAc < 2:3875835/93‑1 (MQ=255)
tAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAc < 1:4750214/93‑1 (MQ=255)
aaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAt < 2:1645536/93‑1 (MQ=255)
aaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAt < 2:4524897/93‑1 (MQ=255)
aCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATg < 2:2805517/93‑1 (MQ=255)
cTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGt > 1:907220/1‑93 (MQ=255)
tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa < 1:5555331/93‑1 (MQ=255)
ggAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAt < 1:2321730/93‑1 (MQ=255)
gAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAtt > 2:1998280/1‑93 (MQ=255)
gAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAtt < 2:4437766/93‑1 (MQ=255)
gAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAAATGTAtt < 1:184654/93‑1 (MQ=255)
cGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGt < 2:641105/93‑1 (MQ=255)
cGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGt > 2:732186/1‑93 (MQ=255)
aCCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTat > 2:4205950/1‑92 (MQ=255)
ccGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAt < 1:117745/93‑1 (MQ=255)
cGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAtt < 1:1900878/93‑1 (MQ=255)
cGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAtt < 1:4109218/93‑1 (MQ=255)
gTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTg > 2:2637291/1‑93 (MQ=255)
tGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGc < 2:600852/93‑1 (MQ=255)
tGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGc > 1:2631157/1‑93 (MQ=255)
tGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGc > 2:804476/1‑93 (MQ=255)
gAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcc > 1:2895751/1‑93 (MQ=255)
aGGTTTGCGGGATGGCCCGAAAGTGTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGccac < 1:5942208/93‑1 (MQ=255)
tttGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCaa < 1:3723343/93‑1 (MQ=255)
|
TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAA > NC_000913/4328717‑4328894
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC > NC_000913/4328714‑4328900
|
TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCG < SRR4302533.382227/94‑1 (MQ=60)
TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCG < SRR4302533.6345806/94‑1 (MQ=60)
TATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAGCAGGGCGACCGTGAAGGTTTGCGG < SRR4302533.6343612/94‑1 (MQ=60)
ATCGGGCTTCCCCTGCGACATGCGCTGGAAGAGACTCAGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGG < SRR4302533.3152472/94‑1 (MQ=60)
GGGCTTTACCTGCGCCATGCGGTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG < SRR4302533.2700350/94‑1 (MQ=60)
GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG > SRR4302533.1453025/1‑94 (MQ=60)
GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG < SRR4302533.3842443/94‑1 (MQ=60)
GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG < SRR4302533.3910841/94‑1 (MQ=60)
GGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGG < SRR4302533.1366322/94‑1 (MQ=60)
GGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGG < SRR4302533.3949900/94‑1 (MQ=60)
GGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGG > SRR4302533.3281204/1‑94 (MQ=60)
GCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC > SRR4302533.689866/1‑94 (MQ=60)
CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC > SRR4302533.5761120/1‑94 (MQ=60)
CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC > SRR4302533.5756103/1‑94 (MQ=60)
CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC < SRR4302533.1126241/94‑1 (MQ=60)
TTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCC < SRR4302533.3929361/94‑1 (MQ=60)
TTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCC > SRR4302533.1627068/1‑94 (MQ=60)
TTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCG > SRR4302533.1322200/1‑94 (MQ=60)
TACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGA > SRR4302533.500615/1‑94 (MQ=60)
TACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGA < SRR4302533.3003842/94‑1 (MQ=60)
ACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAA > SRR4302533.853937/1‑94 (MQ=60)
CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA > SRR4302533.609033/1‑94 (MQ=60)
CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA > SRR4302533.1621689/1‑94 (MQ=60)
CTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAG < SRR4302533.3694526/94‑1 (MQ=60)
GCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGTACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTC < SRR4302533.4582398/94‑1 (MQ=60)
CGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCT < SRR4302533.861095/94‑1 (MQ=60)
CGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCT < SRR4302533.3032931/94‑1 (MQ=60)
CGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCC > SRR4302533.2031631/1‑94 (MQ=60)
GCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTC < SRR4302533.1320842/94‑1 (MQ=60)
GCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTC < SRR4302533.691480/94‑1 (MQ=60)
CCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTC < SRR4302533.4080798/94‑1 (MQ=60)
CCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCG < SRR4302533.5623243/94‑1 (MQ=60)
CCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCG > SRR4302533.723683/1‑94 (MQ=60)
CATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGT > SRR4302533.4885243/1‑94 (MQ=60)
ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT < SRR4302533.5555071/94‑1 (MQ=60)
ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGACTCGTT > SRR4302533.4124539/1‑94 (MQ=60)
TGCGCTGGAAGAGACTCCGGCGTTCCAGAAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTT < SRR4302533.357926/94‑1 (MQ=60)
GCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTA > SRR4302533.197279/1‑94 (MQ=60)
GCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTA > SRR4302533.2892473/1‑94 (MQ=60)
CGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGAGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAA > SRR4302533.2725167/1‑94 (MQ=60)
GCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGTTGGCCCGAAAGTCTCGTTTAAA > SRR4302533.2007920/1‑94 (MQ=60)
GCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAA > SRR4302533.714912/1‑94 (MQ=60)
GCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAA > SRR4302533.365151/1‑94 (MQ=60)
CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG > SRR4302533.1064324/1‑94 (MQ=60)
CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG < SRR4302533.4756261/94‑1 (MQ=60)
CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG > SRR4302533.3377851/1‑94 (MQ=60)
CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG < SRR4302533.3465945/94‑1 (MQ=60)
TGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGA > SRR4302533.1154106/1‑94 (MQ=60)
TGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGA < SRR4302533.4308799/94‑1 (MQ=60)
TGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGA < SRR4302533.5410151/94‑1 (MQ=60)
GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG < SRR4302533.210706/94‑1 (MQ=60)
GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG < SRR4302533.4668149/94‑1 (MQ=60)
GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG > SRR4302533.6340156/1‑94 (MQ=60)
GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG < SRR4302533.435382/94‑1 (MQ=60)
GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG < SRR4302533.4280581/94‑1 (MQ=60)
AAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAT > SRR4302533.4528930/1‑94 (MQ=60)
AAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAT < SRR4302533.265281/94‑1 (MQ=60)
AGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT > SRR4302533.1477623/1‑94 (MQ=60)
ACAGACTCGGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT < SRR4302533.6041110/94‑1 (MQ=60)
GAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTG > SRR4302533.1328700/1‑94 (MQ=60)
GACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCC < SRR4302533.75871/94‑1 (MQ=60)
ACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCA < SRR4302533.6187395/94‑1 (MQ=60)
ACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCA < SRR4302533.2430917/94‑1 (MQ=60)
TCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACT > SRR4302533.5127145/1‑94 (MQ=60)
TCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACT < SRR4302533.1527052/94‑1 (MQ=60)
GGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAA > SRR4302533.2686498/1‑94 (MQ=60)
GGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAA > SRR4302533.4221761/1‑94 (MQ=60)
CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATA > SRR4302533.2458407/1‑94 (MQ=60)
GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC > SRR4302533.2782738/1‑94 (MQ=60)
TTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACT < SRR4302533.4149236/94‑1 (MQ=60)
TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG > SRR4302533.6082803/1‑94 (MQ=60)
TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG > SRR4302533.4594127/1‑94 (MQ=60)
CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG < SRR4302533.4330552/94‑1 (MQ=60)
CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC < SRR4302533.1102464/94‑1 (MQ=60)
CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC < SRR4302533.4782707/94‑1 (MQ=60)
CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC > SRR4302533.1931844/1‑94 (MQ=60)
CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGCTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC > SRR4302533.1521342/1‑94 (MQ=60)
AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG > SRR4302533.4481217/1‑94 (MQ=60)
AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG > SRR4302533.867792/1‑94 (MQ=60)
AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG > SRR4302533.395472/1‑94 (MQ=60)
AGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAG > SRR4302533.3584508/1‑94 (MQ=60)
GCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGC > SRR4302533.5754471/1‑94 (MQ=60)
CATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAGGGCCCGAAAGCCTCGTTTAAAGAGATTGCCCCTAAATACTGGGGCAGCC > SRR4302533.6340184/1‑94 (MQ=60)
ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT > SRR4302533.3121150/1‑94 (MQ=60)
ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT > SRR4302533.2033339/1‑94 (MQ=60)
ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCT > SRR4302533.1559811/1‑94 (MQ=60)
GTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGT < SRR4302533.565678/94‑1 (MQ=60)
GTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGT < SRR4302533.4825504/94‑1 (MQ=60)
TCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTT > SRR4302533.169560/1‑94 (MQ=60)
CGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTG > SRR4302533.2335402/1‑94 (MQ=60)
ATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAC > SRR4302533.1387558/1‑94 (MQ=60)
TAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACA < SRR4302533.2361257/94‑1 (MQ=60)
TAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACA < SRR4302533.4779015/94‑1 (MQ=60)
TAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACA < SRR4302533.2081650/94‑1 (MQ=60)
AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG < SRR4302533.1905385/94‑1 (MQ=60)
ACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGT > SRR4302533.912540/1‑94 (MQ=60)
CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA < SRR4302533.3079226/94‑1 (MQ=60)
TGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAT < SRR4302533.5588881/94‑1 (MQ=60)
TGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAT > SRR4302533.834053/1‑94 (MQ=60)
GGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT < SRR4302533.2336100/94‑1 (MQ=60)
GAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTG < SRR4302533.1993879/94‑1 (MQ=60)
GAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTG < SRR4302533.1994062/94‑1 (MQ=60)
GAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAAATGTATTG < SRR4302533.185802/94‑1 (MQ=60)
CAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTC < SRR4302533.3176256/94‑1 (MQ=60)
AGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCT > SRR4302533.2993907/1‑94 (MQ=60)
GGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTG < SRR4302533.2171321/94‑1 (MQ=60)
GGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTG < SRR4302533.2898362/94‑1 (MQ=60)
CGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTA < SRR4302533.5833518/94‑1 (MQ=60)
CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT < SRR4302533.118494/94‑1 (MQ=60)
CGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTG < SRR4302533.4134201/94‑1 (MQ=60)
CGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTG < SRR4302533.1912485/94‑1 (MQ=60)
GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC > SRR4302533.2647328/1‑94 (MQ=60)
GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC > SRR4302533.4070720/1‑94 (MQ=60)
TGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCC > SRR4302533.2913559/1‑94 (MQ=60)
AAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCAC > SRR4302533.612014/1‑94 (MQ=60)
AGGTTTGCGGGATGGCCCGAAAGTGTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACC < SRR4302533.5978145/94‑1 (MQ=60)
AGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACC < SRR4302533.2875725/94‑1 (MQ=60)
AGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACC < SRR4302533.556112/94‑1 (MQ=60)
GGTTTGCGGGATGGCTCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCA < SRR4302533.4758995/94‑1 (MQ=60)
TTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC < SRR4302533.3746188/94‑1 (MQ=60)
TGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGT > SRR4302533.4976164/1‑94 (MQ=60)
GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC > SRR4302533.3317929/1‑94 (MQ=60)
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TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC > NC_000913/4328714‑4328900
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
