Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,363,427	T→C	T309A (ACT→GCT)	dcuA ←	anaerobic dicarboxylate transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,363,427	0	T	C	100.0%	1316.6 / NA	404	T309A (ACT→GCT)	dcuA	anaerobic dicarboxylate transport
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (231/173); total (231/173)

Only 100 of 418 total aligned reads displayed.

AGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGTATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGA  >  NC_000913/4363337‑4363516

  aagaagaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCg                                                                                       >  2:5575389/1‑93 (MQ=255)

  aagaagaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCg                                                                                       <  1:7152731/93‑1 (MQ=255)

      agaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCa                                                                                   >  1:1246368/1‑93 (MQ=255)

       gaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAg                                                                                  >  2:8777564/1‑93 (MQ=255)

        aTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGc                                                                                 >  2:1826430/1‑93 (MQ=255)

          gACGGCCAGCAGCCGCGGATGACCCTGAATCACTTCGCCAGCGGTATCTTTGATCCAGTGGATGTTGTTGGAAACGAAAGCATCGCCCAGCCa                                                                               <  1:2024004/93‑1 (MQ=255)

          gACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCa                                                                               <  2:4405095/93‑1 (MQ=255)

            cGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACg                                                                             >  2:6336685/1‑93 (MQ=255)

             ggCCAGCAGCCACGGATGACCCTGAATCACCTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAACATCGCCCACCCCCGc                                                                            >  1:3268015/1‑93 (MQ=255)

              gCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCa                                                                           >  1:5797907/1‑93 (MQ=255)

              gCCAGCAGCCACGGATGACCCTGAAGCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTCGTTAGAAACGAAAGCATCGCCCAGCCACGCa                                                                           <  2:5182211/93‑1 (MQ=255)

                cagcagCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAac                                                                         <  2:1365689/93‑1 (MQ=255)

                cagcagCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAac                                                                         >  1:8610923/1‑93 (MQ=255)

                cagcagCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAac                                                                         >  1:758633/1‑93 (MQ=255)

                cagcagCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAac                                                                         <  1:1688849/93‑1 (MQ=255)

                 agcagcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAaca                                                                        <  2:7816982/93‑1 (MQ=255)

                  gcagcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGGCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAacac                                                                       >  2:2696368/1‑93 (MQ=255)

                    agcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAccc                                                                     <  1:7875639/93‑1 (MQ=255)

                     gcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCa                                                                    <  2:4704828/93‑1 (MQ=255)

                     gcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCa                                                                    >  1:1365592/1‑93 (MQ=255)

                        aCGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGa                                                                 <  1:9771430/93‑1 (MQ=255)

                         cGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGAt                                                                >  2:2056651/1‑93 (MQ=255)

                         cGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGAt                                                                <  2:2419031/93‑1 (MQ=255)

                          ggATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATa                                                               >  2:6443407/1‑93 (MQ=255)

                          ggATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATa                                                               <  2:4913318/93‑1 (MQ=255)

                            aTGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACa                                                             >  2:797666/1‑93 (MQ=255)

                                cccTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATa                                                         <  1:6573610/93‑1 (MQ=255)

                                cccTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATa                                                         <  2:3424885/93‑1 (MQ=255)

                                 ccTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATAc                                                        <  2:6905657/93‑1 (MQ=255)

                                  cTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACa                                                       <  1:3085285/93‑1 (MQ=255)

                                  cTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACa                                                       >  2:2798441/1‑93 (MQ=255)

                                  cTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACa                                                       <  1:3569722/93‑1 (MQ=255)

                                   ttaaTCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCGCGCAACTCCCAGGATACAAATACAg                                                      <  1:8740018/91‑1 (MQ=255)

                                   tGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAg                                                      >  2:5710791/1‑93 (MQ=255)

                                   tGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAg                                                      >  2:5931983/1‑93 (MQ=255)

                                    gAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAgg                                                     >  2:9273408/1‑93 (MQ=255)

                                     aaTCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGgc                                                    >  1:7765148/1‑93 (MQ=255)

                                       tCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGgcgc                                                  >  1:4463591/1‑93 (MQ=255)

                                       tCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGgcgc                                                  >  2:1508035/1‑93 (MQ=255)

                                          cTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCa                                               >  2:5042216/1‑93 (MQ=255)

                                          cTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCa                                               <  1:5557996/93‑1 (MQ=255)

                                          cTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCa                                               <  2:7425564/93‑1 (MQ=255)

                                           ttCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAt                                              <  2:8442721/93‑1 (MQ=255)

                                             cACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATAc                                            <  2:7329837/93‑1 (MQ=255)

                                              aCCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATAcc                                           <  1:5905496/93‑1 (MQ=255)

                                               ccAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCt                                          >  2:9702167/1‑93 (MQ=255)

                                                cAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTg                                         <  1:241223/93‑1 (MQ=255)

                                                  gCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCt                                       >  2:2290107/1‑93 (MQ=255)

                                                   cGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCtt                                      >  2:1672588/1‑93 (MQ=255)

                                                    ggTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGCTACAAATACAGGCGCTCATACCTGCttt                                     >  2:6530742/1‑93 (MQ=255)

                                                    ggTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCttt                                     <  2:4515527/93‑1 (MQ=255)

                                                    ggTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCttt                                     >  2:4015642/1‑93 (MQ=255)

                                                    ggTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCttt                                     <  2:3726652/93‑1 (MQ=255)

                                                     gTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTg                                    >  2:1714846/1‑93 (MQ=255)

                                                     gTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTg                                    >  2:1871742/1‑93 (MQ=255)

                                                       aTCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCACCACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGaa                                  <  2:6047370/93‑1 (MQ=255)

                                                       aTCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGaa                                  >  1:1062845/1‑93 (MQ=255)

                                                       aTCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGaa                                  >  2:4775449/1‑93 (MQ=255)

                                                       aTCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGaa                                  >  2:2209726/1‑93 (MQ=255)

                                                        tCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAg                                 <  1:894127/93‑1 (MQ=255)

                                                         cTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCATCACCCAGGATACGAGTACAGGCGCTCATCCCAGCTTTGAAgg                                >  2:5399025/1‑93 (MQ=255)

                                                         cTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAgg                                >  1:3452598/1‑93 (MQ=255)

                                                         cTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAgg                                <  2:529093/93‑1 (MQ=255)

                                                          tttGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAggg                               >  1:5210299/1‑92 (MQ=255)

                                                          tttGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGt                               >  2:4645680/1‑93 (MQ=255)

                                                           ttGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTg                              >  2:9138042/1‑93 (MQ=255)

                                                           ttGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTg                              >  2:1618344/1‑93 (MQ=255)

                                                             gATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCt                            >  1:2896697/1‑93 (MQ=255)

                                                              aTCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCCGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTg                           <  1:9909209/93‑1 (MQ=255)

                                                              aTCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTg                           >  2:8087072/1‑93 (MQ=255)

                                                                 cAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAg                        >  1:5698517/1‑93 (MQ=255)

                                                                  aGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGt                       <  1:6911108/93‑1 (MQ=255)

                                                                  aGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGt                       >  1:2290176/1‑93 (MQ=255)

                                                                  aGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGt                       <  1:1817045/93‑1 (MQ=255)

                                                                    tCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTg                     >  2:9831750/1‑93 (MQ=255)

                                                                     tgATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGa                    <  1:8270708/92‑1 (MQ=255)

                                                                      gATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAg                   <  2:7195363/93‑1 (MQ=255)

                                                                       aTGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAgg                  >  2:8307972/1‑93 (MQ=255)

                                                                       aTGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAgg                  >  1:2627145/1‑93 (MQ=255)

                                                                        tgttgtTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGa                 <  1:9085647/93‑1 (MQ=255)

                                                                         gttgttGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAt                <  1:9533955/93‑1 (MQ=255)

                                                                          ttgttgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAtg               >  1:1136293/1‑93 (MQ=255)

                                                                           tgttgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAtgt              <  1:8873632/93‑1 (MQ=255)

                                                                           tgttgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAtgt              <  1:4110978/93‑1 (MQ=255)

                                                                            gttgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAtgtt             >  2:389334/1‑93 (MQ=255)

                                                                            gttgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAtgtt             <  1:481921/93‑1 (MQ=255)

                                                                              tgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAtgttgt           <  2:7541693/93‑1 (MQ=255)

                                                                              gggAAGCGAAAGCATCGCCCGGCCACGCAGCACCCAGGATCAAAAAACAGGCGCTCATCCCTGCTTTGAAGGTGCT‑GAGTTGAGGATGTTGTc          <  1:1479878/92‑1 (MQ=255)

                                                                               ggAAACGAAAGCATCGCCCAGCCACGCAACACCGAGGATACAAATCCAGACGCTCATCCCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTc          <  1:4241091/93‑1 (MQ=255)

                                                                                gAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCg         >  1:9220163/1‑93 (MQ=255)

                                                                                 aaaCGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCgg        <  2:1014300/93‑1 (MQ=255)

                                                                                     gAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATc    <  1:6336686/93‑1 (MQ=255)

                                                                                     gAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATc    <  1:543069/93‑1 (MQ=255)

                                                                                      aaaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCg   >  1:2539065/1‑93 (MQ=255)

                                                                                      aaaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCg   >  1:6260698/1‑93 (MQ=255)

                                                                                      aaaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCg   <  1:459815/93‑1 (MQ=255)

                                                                                      aaaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCg   >  1:904565/1‑93 (MQ=255)

                                                                                      aaaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCg   >  2:3070068/1‑93 (MQ=255)

                                                                                       aaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGa  >  1:7345571/1‑93 (MQ=255)

                                                                                       aaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGa  >  2:9511031/1‑93 (MQ=255)

AGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGTATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGA  >  NC_000913/4363337‑4363516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 204 total aligned reads displayed.

CAAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGTATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGACT  >  NC_000913/4363334‑4363518

CAAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGC                                                                                             >  SRR4302540.1517543/1‑94 (MQ=60)

 AAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCA                                                                                            <  SRR4302540.9968790/94‑1 (MQ=60)

 AAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCA                                                                                            >  SRR4302540.4538886/1‑94 (MQ=60)

 AAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCA                                                                                            <  SRR4302540.8337101/94‑1 (MQ=60)

  AAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCAT                                                                                           >  SRR4302540.2248039/1‑94 (MQ=60)

    GAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCG                                                                                         >  SRR4302540.2760962/1‑94 (MQ=60)

    GAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCG                                                                                         <  SRR4302540.3079683/94‑1 (MQ=60)

    GAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCG                                                                                         <  SRR4302540.654905/94‑1 (MQ=60)

    GAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCCTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCG                                                                                         <  SRR4302540.1805874/94‑1 (MQ=60)

     GAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGC                                                                                        <  SRR4302540.4168734/94‑1 (MQ=60)

     AAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGC                                                                                        <  SRR4302540.7765704/94‑1 (MQ=60)

     AAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGC                                                                                        <  SRR4302540.7232442/94‑1 (MQ=60)

     AAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGC                                                                                        <  SRR4302540.4588258/94‑1 (MQ=60)

       GAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCC                                                                                      >  SRR4302540.1103063/1‑94 (MQ=60)

       GAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCC                                                                                      >  SRR4302540.3529626/1‑94 (MQ=60)

        AAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCA                                                                                     <  SRR4302540.7574221/94‑1 (MQ=60)

        AAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCA                                                                                     >  SRR4302540.1259083/1‑94 (MQ=60)

        AAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCA                                                                                     >  SRR4302540.5793445/1‑94 (MQ=60)

           ATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCC                                                                                  >  SRR4302540.7434131/1‑94 (MQ=60)

            TGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCA                                                                                 >  SRR4302540.7174490/1‑94 (MQ=60)

            TGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCA                                                                                 >  SRR4302540.144039/1‑94 (MQ=60)

            TGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCA                                                                                 >  SRR4302540.7174489/1‑94 (MQ=60)

             GACGGCCAGCAGCCGCGGATGACCCTGAATCACTTCGCCAGCGGTATCTTTGATCCAGTGGATGTTGTTGGAAACGAAAGCATCGCCCAGCCAC                                                                                <  SRR4302540.2045875/94‑1 (MQ=60)

             GACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCAC                                                                                <  SRR4302540.5954312/94‑1 (MQ=60)

               CGGCCAGCAGCCACGGATGACCCTGAATCACCTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAACATCGCCCACCCCCGC                                                                              >  SRR4302540.3303679/1‑94 (MQ=60)

                GGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCA                                                                             >  SRR4302540.5861975/1‑94 (MQ=60)

                 GCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAA                                                                            <  SRR4302540.9787172/94‑1 (MQ=60)

                  CCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAAC                                                                           >  SRR4302540.766706/1‑94 (MQ=60)

                  CCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAAC                                                                           >  SRR4302540.8710977/1‑94 (MQ=60)

                  CCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAAC                                                                           <  SRR4302540.917810/94‑1 (MQ=60)

                  CCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAAC                                                                           >  SRR4302540.2331265/1‑94 (MQ=60)

                  CCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAAC                                                                           <  SRR4302540.5541722/94‑1 (MQ=60)

                   CAGCAGGCACGGATGACCCTGAATCACTTCACCAGCGGTCTCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACA                                                                          <  SRR4302540.7397296/94‑1 (MQ=60)

                   CAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACA                                                                          <  SRR4302540.1707163/94‑1 (MQ=60)

                   CAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACA                                                                          <  SRR4302540.6309960/94‑1 (MQ=60)

                    AGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAC                                                                         >  SRR4302540.5606099/1‑94 (MQ=60)

                     GCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACC                                                                        <  SRR4302540.762456/94‑1 (MQ=60)

                       AGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCA                                                                      <  SRR4302540.7967628/94‑1 (MQ=60)

                       AGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCA                                                                      <  SRR4302540.10058461/94‑1 (MQ=60)

                       AGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCA                                                                      >  SRR4302540.1380033/1‑94 (MQ=60)

                        GCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGTTCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAG                                                                     <  SRR4302540.6586462/94‑1 (MQ=60)

                        GCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAG                                                                     >  SRR4302540.216339/1‑94 (MQ=60)

                         CCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGG                                                                    >  SRR4302540.9805248/1‑94 (MQ=60)

                           ACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGAT                                                                  <  SRR4302540.9885991/94‑1 (MQ=60)

                           ACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGAT                                                                  <  SRR4302540.3861765/94‑1 (MQ=60)

                           ACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGAT                                                                  <  SRR4302540.1343685/94‑1 (MQ=60)

                            CGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATA                                                                 <  SRR4302540.1715686/94‑1 (MQ=60)

                             GGAGGACCATGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATAC                                                                <  SRR4302540.9012714/94‑1 (MQ=60)

                               ATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAA                                                              >  SRR4302540.8973446/1‑94 (MQ=60)

                               ATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAA                                                              >  SRR4302540.4221304/1‑94 (MQ=60)

                                 GACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAAT                                                            <  SRR4302540.2493218/94‑1 (MQ=60)

                                  ACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATA                                                           >  SRR4302540.6982562/1‑94 (MQ=60)

                                  ACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATA                                                           >  SRR4302540.4731538/1‑94 (MQ=60)

                                  ACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCAAGCCACGCAACCCCCAGGATACAAATA                                                           >  SRR4302540.8536413/1‑94 (MQ=60)

                                   CCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATAC                                                          <  SRR4302540.8790342/94‑1 (MQ=60)

                                   CCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATAC                                                          <  SRR4302540.8176373/94‑1 (MQ=60)

                                   CCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATAC                                                          <  SRR4302540.6646433/94‑1 (MQ=60)

                                    CCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACA                                                         <  SRR4302540.8991808/94‑1 (MQ=60)

                                    CCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACA                                                         <  SRR4302540.1251802/94‑1 (MQ=60)

                                     CTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACGCCCAGGATACAAATACAG                                                        <  SRR4302540.1399258/94‑1 (MQ=60)

                                     CTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAG                                                        <  SRR4302540.1589686/94‑1 (MQ=60)

                                     CTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAG                                                        <  SRR4302540.3608716/94‑1 (MQ=60)

                                     CTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAG                                                        <  SRR4302540.10019286/94‑1 (MQ=60)

                                     CTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAG                                                        <  SRR4302540.3119137/94‑1 (MQ=60)

                                      TTAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCGCGCAACTCCCAGGATACAAATACAGG                                                       <  SRR4302540.8841480/94‑1 (MQ=60)

                                      TGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGG                                                       >  SRR4302540.1213317/1‑94 (MQ=60)

                                      TGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGG                                                       >  SRR4302540.1989967/1‑94 (MQ=60)

                                      TGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGG                                                       >  SRR4302540.2743419/1‑94 (MQ=60)

                                       GAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCCCGCAACACCCAGGATACAAATACAGGC                                                      >  SRR4302540.7856224/1‑94 (MQ=60)

                                       GAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGC                                                      >  SRR4302540.7855923/1‑94 (MQ=60)

                                        AATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCG                                                     <  SRR4302540.6351379/94‑1 (MQ=60)

                                         ATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGC                                                    >  SRR4302540.4511977/1‑94 (MQ=60)

                                         ATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGC                                                    >  SRR4302540.9131982/1‑94 (MQ=60)

                                         ATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGC                                                    >  SRR4302540.9131981/1‑94 (MQ=60)

                                          TCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACACATACAGGCGCT                                                   >  SRR4302540.5211695/1‑94 (MQ=60)

                                          TCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCT                                                   >  SRR4302540.919710/1‑94 (MQ=60)

                                             CTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAT                                                <  SRR4302540.7263039/94‑1 (MQ=60)

                                             CTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAT                                                <  SRR4302540.4273224/94‑1 (MQ=60)

                                             CTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAT                                                >  SRR4302540.4376935/1‑94 (MQ=60)

                                             CTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAT                                                <  SRR4302540.5619213/94‑1 (MQ=60)

                                               TCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATAC                                              >  SRR4302540.5901368/1‑94 (MQ=60)

                                                CACCAGCGGTATCTTTGATCCAGTCGATTTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACC                                             <  SRR4302540.5830120/94‑1 (MQ=60)

                                                CACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACC                                             <  SRR4302540.5830121/94‑1 (MQ=60)

                                                 ACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCT                                            <  SRR4302540.3211515/94‑1 (MQ=60)

                                                 ACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCT                                            <  SRR4302540.5970727/94‑1 (MQ=60)

                                                  CCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACCCCCAGGATACAAATACAGGCGCTCATACCTG                                           >  SRR4302540.8217442/1‑94 (MQ=60)

                                                   CAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGC                                          >  SRR4302540.9185024/1‑94 (MQ=60)

                                                   CAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGC                                          <  SRR4302540.243555/94‑1 (MQ=60)

                                                    AGCGGTATCTTTGATCTAGTCTATGTTGTTTGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCT                                         <  SRR4302540.5369659/94‑1 (MQ=60)

                                                    AGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCT                                         >  SRR4302540.3449436/1‑94 (MQ=60)

                                                    AGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCT                                         <  SRR4302540.4477431/94‑1 (MQ=60)

                                                     GCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTT                                        <  SRR4302540.8803813/94‑1 (MQ=60)

                                                      CGGTATCTTTGATCCATTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATATAAATACAGGCGCTCATACCTTCTTT                                       >  SRR4302540.5628793/1‑94 (MQ=60)

                                                      CGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATAACTGCTTT                                       >  SRR4302540.9646497/1‑94 (MQ=60)

                                                         TATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAA                                    >  SRR4302540.1073664/1‑94 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   <  SRR4302540.6053893/94‑1 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   <  SRR4302540.1127723/94‑1 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   <  SRR4302540.6622055/94‑1 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   >  SRR4302540.8938489/1‑94 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   >  SRR4302540.7377139/1‑94 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   <  SRR4302540.162201/94‑1 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   >  SRR4302540.170646/1‑94 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   <  SRR4302540.1964558/94‑1 (MQ=60)

                                                          ATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAG                                   <  SRR4302540.2387472/94‑1 (MQ=60)

                                                           TCTTTTATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGG                                  <  SRR4302540.3503361/94‑1 (MQ=60)

                                                           TCTTTGATCCAGTCGATGTTGTTGGAACCGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGG                                  <  SRR4302540.1371695/94‑1 (MQ=60)

                                                           TCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGG                                  <  SRR4302540.903628/94‑1 (MQ=60)

                                                           TCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGG                                  >  SRR4302540.3490160/1‑94 (MQ=60)

                                                            CTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGT                                 <  SRR4302540.7889152/94‑1 (MQ=60)

                                                            CTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGT                                 <  SRR4302540.4796508/94‑1 (MQ=60)

                                                            CTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGT                                 <  SRR4302540.7889151/94‑1 (MQ=60)

                                                            CTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGG                                 >  SRR4302540.5267064/1‑94 (MQ=60)

                                                            CTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGG                                 >  SRR4302540.2024360/1‑94 (MQ=60)

                                                             TTTGATCCAGTCGATGTTGTTGGAAACGCAAGCCTCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTG                                >  SRR4302540.2933623/1‑94 (MQ=60)

                                                             TTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTG                                >  SRR4302540.2933624/1‑94 (MQ=60)

                                                             TTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTG                                >  SRR4302540.6763933/1‑94 (MQ=60)

                                                               TGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCT                              >  SRR4302540.2928285/1‑94 (MQ=60)

                                                               TGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCT                              >  SRR4302540.9836319/1‑94 (MQ=60)

                                                                GATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTG                             <  SRR4302540.8630536/94‑1 (MQ=60)

                                                                GATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTG                             <  SRR4302540.2206837/94‑1 (MQ=60)

                                                                 ATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCCGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGG                            <  SRR4302540.10024951/94‑1 (MQ=60)

                                                                 ATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGG                            <  SRR4302540.2463473/94‑1 (MQ=60)

                                                                 ATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGG                            >  SRR4302540.4570094/1‑94 (MQ=60)

                                                                 ATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGG                            >  SRR4302540.1133024/1‑94 (MQ=60)

                                                                  TCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGA                           >  SRR4302540.8797950/1‑94 (MQ=60)

                                                                  TCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGA                           >  SRR4302540.1726115/1‑94 (MQ=60)

                                                                   CCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAG                          >  SRR4302540.5761258/1‑94 (MQ=60)

                                                                    CAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGT                         >  SRR4302540.2314817/1‑94 (MQ=60)

                                                                    CAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGT                         <  SRR4302540.2644216/94‑1 (MQ=60)

                                                                    CAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGT                         >  SRR4302540.6115632/1‑94 (MQ=60)

                                                                     AGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTT                        >  SRR4302540.1602559/1‑94 (MQ=60)

                                                                     AGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTT                        >  SRR4302540.5476962/1‑94 (MQ=60)

                                                                     AGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTT                        <  SRR4302540.9015626/94‑1 (MQ=60)

                                                                     AGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTT                        <  SRR4302540.1836892/94‑1 (MQ=60)

                                                                     AGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTT                        >  SRR4302540.3417379/1‑94 (MQ=60)

                                                                     AGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTT                        <  SRR4302540.6987996/94‑1 (MQ=60)

                                                                      GTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTG                       <  SRR4302540.3202408/94‑1 (MQ=60)

                                                                      GTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTG                       <  SRR4302540.5759145/94‑1 (MQ=60)

                                                                       TCGATGTGGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGGTGA                      >  SRR4302540.9959935/1‑94 (MQ=60)

                                                                        TGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAG                     <  SRR4302540.8366801/94‑1 (MQ=60)

                                                                        CGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAG                     >  SRR4302540.3391798/1‑94 (MQ=60)

                                                                        CGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAG                     >  SRR4302540.840985/1‑94 (MQ=60)

                                                                        CGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAG                     >  SRR4302540.2481433/1‑94 (MQ=60)

                                                                         GATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGTATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGG                    >  SRR4302540.9125340/1‑94 (MQ=60)

                                                                         GATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGG                    >  SRR4302540.2580407/1‑94 (MQ=60)

                                                                         GATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGG                    >  SRR4302540.5725861/1‑94 (MQ=60)

                                                                         GATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGG                    >  SRR4302540.2655563/1‑94 (MQ=60)

                                                                          ATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGCTACAAATACACGCGCTCATACCCGCTTTGAAGGTGCTGGAGTTGAGGA                   >  SRR4302540.9402417/1‑94 (MQ=60)

                                                                          ATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGG                   >  SRR4302540.5908752/1‑94 (MQ=60)

                                                                          ATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGA                   >  SRR4302540.8813916/1‑94 (MQ=60)

                                                                           TGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAT                  <  SRR4302540.9194802/94‑1 (MQ=60)

                                                                           TGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAT                  >  SRR4302540.9271000/1‑94 (MQ=60)

                                                                           TGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAT                  >  SRR4302540.9289642/1‑94 (MQ=60)

                                                                           TGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAT                  >  SRR4302540.5601626/1‑94 (MQ=60)

                                                                           TGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAT                  <  SRR4302540.6224368/94‑1 (MQ=60)

                                                                           TGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAT                  >  SRR4302540.3814406/1‑94 (MQ=60)

                                                                           TGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGAT                  >  SRR4302540.4787051/1‑94 (MQ=60)

                                                                            GTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATG                 >  SRR4302540.1442551/1‑94 (MQ=60)

                                                                            GTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATG                 <  SRR4302540.9646820/94‑1 (MQ=60)

                                                                            GTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATG                 >  SRR4302540.1148145/1‑94 (MQ=60)

                                                                            GTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATG                 >  SRR4302540.1148144/1‑94 (MQ=60)

                                                                             TTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGggttgtt                >  SRR4302540.7255242/1‑87 (MQ=60)

                                                                             TTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGT                >  SRR4302540.2683457/1‑94 (MQ=60)

                                                                              TGTTGGAAACGAAATCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTT               <  SRR4302540.8318309/94‑1 (MQ=60)

                                                                              TGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGTGTATGTT               >  SRR4302540.2357994/1‑94 (MQ=60)

                                                                              TGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTT               <  SRR4302540.4155352/94‑1 (MQ=60)

                                                                              TGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTT               <  SRR4302540.8976328/94‑1 (MQ=60)

                                                                               GTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTG              <  SRR4302540.5073086/94‑1 (MQ=60)

                                                                               GTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTG              >  SRR4302540.6341665/1‑94 (MQ=60)

                                                                               GTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTG              <  SRR4302540.487084/94‑1 (MQ=60)

                                                                                TTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGT             <  SRR4302540.8927879/94‑1 (MQ=60)

                                                                                TTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGT             >  SRR4302540.5293328/1‑94 (MQ=60)

                                                                                 TGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTC            <  SRR4302540.4528320/94‑1 (MQ=60)

                                                                                  GGAAACGAAAGCATCGCCCAGCCACGCAACACCGAGGATACAAATCCAGACGCTCATCCCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCG           <  SRR4302540.4287232/94‑1 (MQ=60)

                                                                                  GGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCG           >  SRR4302540.9330747/1‑94 (MQ=60)

                                                                                    AAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGT         >  SRR4302540.3178873/1‑94 (MQ=60)

                                                                                    AAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGT         >  SRR4302540.7026804/1‑94 (MQ=60)

                                                                                    AAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGT         >  SRR4302540.7814472/1‑94 (MQ=60)

                                                                                    AAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGT         >  SRR4302540.3819503/1‑94 (MQ=60)

                                                                                    AAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGT         <  SRR4302540.7522733/94‑1 (MQ=60)

                                                                                    AAACGAAAGCAACGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGT         >  SRR4302540.938057/1‑94 (MQ=60)

                                                                                     AACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTA        >  SRR4302540.5145748/1‑94 (MQ=60)

                                                                                      ACGAAAGCATCGCTCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTAT       <  SRR4302540.1350618/94‑1 (MQ=60)

                                                                                       CGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATC      <  SRR4302540.9506146/94‑1 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATGG     >  SRR4302540.3529133/1‑94 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     >  SRR4302540.6330353/1‑94 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     >  SRR4302540.4435154/1‑94 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     <  SRR4302540.5330318/94‑1 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     <  SRR4302540.6407243/94‑1 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     >  SRR4302540.6663927/1‑94 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     >  SRR4302540.2599150/1‑94 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     >  SRR4302540.914167/1‑94 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     >  SRR4302540.4081543/1‑94 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     <  SRR4302540.6407249/94‑1 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCG     >  SRR4302540.2566443/1‑94 (MQ=60)

                                                                                        GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGGTGAGGATGTTGTCGGTATCG     >  SRR4302540.914168/1‑94 (MQ=60)

                                                                                         AAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGA    <  SRR4302540.464723/94‑1 (MQ=60)

                                                                                         AAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGA    >  SRR4302540.7427527/1‑94 (MQ=60)

                                                                                          AAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGAC   >  SRR4302540.4788084/1‑94 (MQ=60)

                                                                                           AGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGACT  <  SRR4302540.7727754/94‑1 (MQ=60)

CAAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGTATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGACT  >  NC_000913/4363334‑4363518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`