Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,368,258 A→G intergenic (‑268/‑8) yjeH ← / → mopB putative transport/GroES

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,368,2580AG99.0% 1576.2 / 0.7 495intergenic (‑268/‑8)yjeH/mopBputative transport/GroES
Reads supporting (aligned to +/- strand):  ref base A (2/3);  new base G (217/272);  total (220/275)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.41e-01

Only 100 of 517 total aligned reads displayed.

GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA  >  NC_000913/4368168‑4368347
                                                                                          |                                                                                         
gAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGt                                                                                         >  2:801433/1‑93 (MQ=255)
 aaGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGtt                                                                                        >  2:1299274/1‑93 (MQ=255)
 aaGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGtt                                                                                        <  2:1622325/93‑1 (MQ=255)
  aGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTa                                                                                       >  1:9712150/1‑93 (MQ=255)
    ccTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATc                                                                                     <  1:2473153/93‑1 (MQ=255)
     cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTGCGGCGTCACCCATAACAGATACGGACCTTCTCATAGGGGGGGTATCa                                                                                    >  2:4042837/1‑93 (MQ=255)
     cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCa                                                                                    <  1:4641371/93‑1 (MQ=255)
     cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCa                                                                                    <  2:105902/93‑1 (MQ=255)
       cATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAt                                                                                  >  2:9503394/1‑93 (MQ=255)
        aTCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATg                                                                                 >  1:5255286/1‑93 (MQ=255)
         tCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGa                                                                                <  2:8799051/93‑1 (MQ=255)
         tCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGa                                                                                >  1:5915510/1‑93 (MQ=255)
          ccccTTTTCTCTGGTCACCAGCCGGTAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGaa                                                                               >  2:8949864/1‑93 (MQ=255)
           cccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAat                                                                              <  2:9043198/93‑1 (MQ=255)
            ccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAata                                                                             >  1:7777895/1‑93 (MQ=255)
            ccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAata                                                                             >  1:1174662/1‑93 (MQ=255)
            ccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAata                                                                             <  2:340571/93‑1 (MQ=255)
             cATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAatat                                                                            <  2:5658977/93‑1 (MQ=255)
              aTTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAtt                                                                           <  1:4390/93‑1 (MQ=255)
               tttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTc                                                                          <  1:3587768/93‑1 (MQ=255)
               tttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTc                                                                          >  2:7688339/1‑93 (MQ=255)
               tttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTc                                                                          >  2:1510904/1‑93 (MQ=255)
                 tatctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAAGAGGGTTATCAATGAATATTcac                                                                        >  2:7485824/3‑91 (MQ=255)
                  ctctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTc                                                                       <  2:1213184/93‑1 (MQ=255)
                  ctctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTc                                                                       >  1:9795389/1‑93 (MQ=255)
                   tctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTcc                                                                      >  2:6331394/1‑93 (MQ=255)
                   tctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTcc                                                                      >  1:2904735/1‑93 (MQ=255)
                      ggTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAtt                                                                   <  2:854391/93‑1 (MQ=255)
                      ggTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAtt                                                                   <  1:6325699/93‑1 (MQ=255)
                          aCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCAt                                                               >  2:3858678/1‑93 (MQ=255)
                          aCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCAt                                                               >  2:5818528/1‑93 (MQ=255)
                            cAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGa                                                             <  2:1739510/93‑1 (MQ=255)
                            cAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGa                                                             >  1:1253586/1‑93 (MQ=255)
                            cAGCCGGCAAAACCCGTAAGCTCCGGCGACACCGATAACAGATACGGACTTTCTCAAAGGAGGATTATCAATGAATATTCCTCCATTGCATGa                                                             <  2:9360472/93‑1 (MQ=255)
                             aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt                                                            <  1:6996383/93‑1 (MQ=255)
                               cagggAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcg                                                          <  2:318172/91‑1 (MQ=255)
                                cGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcgc                                                         <  1:9060833/93‑1 (MQ=255)
                                  ggAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGt                                                       <  1:6606659/93‑1 (MQ=255)
                                   gAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTg                                                      >  1:2254752/1‑93 (MQ=255)
                                     aaCGACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGACGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt                                                    <  1:9342451/93‑1 (MQ=255)
                                     aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt                                                    <  1:683521/93‑1 (MQ=255)
                                     aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt                                                    <  1:7453365/93‑1 (MQ=255)
                                     aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt                                                    <  2:7879516/93‑1 (MQ=255)
                                     aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt                                                    >  1:1408680/1‑93 (MQ=255)
                                     aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt                                                    <  2:2374172/93‑1 (MQ=255)
                                     aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt                                                    <  1:8885167/93‑1 (MQ=255)
                                       ccACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCg                                                  <  1:10007402/93‑1 (MQ=255)
                                         aCGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTc                                                >  2:8152450/1‑93 (MQ=255)
                                          cGTAAGCTGCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCa                                               <  2:4563397/93‑1 (MQ=255)
                                            tAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAg                                             >  2:4299737/1‑93 (MQ=255)
                                            tAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAg                                             >  1:6153577/1‑93 (MQ=255)
                                                cTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTa                                         <  1:3417122/93‑1 (MQ=255)
                                                 tCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaa                                        >  2:3042813/1‑93 (MQ=255)
                                                 tCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaa                                        <  2:2810329/93‑1 (MQ=255)
                                                  ccGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaaa                                       <  1:3969782/93‑1 (MQ=255)
                                                  ccGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaaa                                       >  1:3250083/1‑93 (MQ=255)
                                                     gCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaa                                    <  2:970216/93‑1 (MQ=255)
                                                     gCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaa                                    <  1:378372/93‑1 (MQ=255)
                                                     gCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaa                                    <  1:6383991/93‑1 (MQ=255)
                                                      cGTCACGCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaag                                   <  1:8612170/93‑1 (MQ=255)
                                                      cGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaag                                   >  1:2866831/1‑93 (MQ=255)
                                                         cACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTg                                >  1:9177181/1‑93 (MQ=255)
                                                          aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGa                               >  2:224923/1‑93 (MQ=255)
                                                          aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGa                               <  1:7337783/93‑1 (MQ=255)
                                                          aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGa                               <  1:1537684/93‑1 (MQ=255)
                                                           cccATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGaa                              >  1:8022300/1‑93 (MQ=255)
                                                            ccATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGaaa                             <  2:5489783/93‑1 (MQ=255)
                                                            ccATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGaaa                             >  1:4102814/1‑93 (MQ=255)
                                                             cATAACAGATACGTACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAc                            >  2:4876500/1‑93 (MQ=255)
                                                             cATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGAGTAAAGAAGTTGAAAc                            <  1:1640146/93‑1 (MQ=255)
                                                              aTAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACt                           >  2:9808582/1‑93 (MQ=255)
                                                               tAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTa                          >  2:6063151/1‑93 (MQ=255)
                                                               tAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTa                          >  2:8427254/1‑93 (MQ=255)
                                                                  cAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAt                       <  2:8629515/93‑1 (MQ=255)
                                                                  cAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAt                       <  1:4270665/93‑1 (MQ=255)
                                                                   aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc                      <  2:9612131/93‑1 (MQ=255)
                                                                   aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc                      >  2:1969862/1‑93 (MQ=255)
                                                                   aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc                      <  2:9165057/93‑1 (MQ=255)
                                                                    gATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATct                     >  1:2672100/1‑93 (MQ=255)
                                                                      tACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc                   >  2:2074801/1‑93 (MQ=255)
                                                                      tACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc                   <  1:2538821/93‑1 (MQ=255)
                                                                       aCGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgct                  <  2:3679605/93‑1 (MQ=255)
                                                                       aCGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgct                  <  2:4129646/93‑1 (MQ=255)
                                                                        cGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgctg                 <  2:7185596/93‑1 (MQ=255)
                                                                         ggACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTgg                <  2:7050387/93‑1 (MQ=255)
                                                                         ggACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTgg                <  2:6414060/93‑1 (MQ=255)
                                                                          gACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggc               >  1:8132652/1‑93 (MQ=255)
                                                                          gACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggc               >  2:679313/1‑93 (MQ=255)
                                                                             tttCTCAAAGGAGGGTTATCAATGAATATTCCTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggcggc            <  1:301764/93‑1 (MQ=255)
                                                                              ttCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCa           <  2:2574577/93‑1 (MQ=255)
                                                                               tctcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAt          <  1:7648550/93‑1 (MQ=255)
                                                                                 tcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCg        >  1:5670584/1‑93 (MQ=255)
                                                                                 tcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCg        <  1:9503715/93‑1 (MQ=255)
                                                                                  cAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTCAATCAGCTGGCGGCATCGt       >  1:5455404/1‑93 (MQ=255)
                                                                                    aaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGttt     >  2:5191429/1‑92 (MQ=255)
                                                                                    aaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTc     <  1:5008092/93‑1 (MQ=255)
                                                                                    aaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTc     >  1:1891206/1‑93 (MQ=255)
                                                                                    aaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTc     <  1:1054375/93‑1 (MQ=255)
                                                                                     aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTANATCTGCTGGCGGCNTCGTTCt    >  1:6574591/1‑93 (MQ=255)
                                                                                     aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt    <  1:8427990/93‑1 (MQ=255)
                                                                                          |                                                                                         
GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA  >  NC_000913/4368168‑4368347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 278 total aligned reads displayed.
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG  >  NC_000913/4368165‑4368351
                                                                                             |                                                                                             
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG                                                                                               <  SRR4302540.1745526/94‑1 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG                                                                                               <  SRR4302540.5195873/94‑1 (MQ=60)
  CGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT                                                                                             <  SRR4302540.2749342/94‑1 (MQ=60)
  CGAAGCCCCACCCCCCTTTCTTTGGGCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATTCGGACTTTCTCAAAGGAGGGT                                                                                             <  SRR4302540.4105985/94‑1 (MQ=60)
   GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTT                                                                                            >  SRR4302540.8384716/1‑94 (MQ=60)
   GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTT                                                                                            <  SRR4302540.8164460/94‑1 (MQ=60)
   GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTT                                                                                            >  SRR4302540.861053/1‑94 (MQ=60)
    AAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTA                                                                                           <  SRR4302540.9295738/94‑1 (MQ=60)
     AGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAT                                                                                          >  SRR4302540.7428150/1‑94 (MQ=60)
     AGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAT                                                                                          >  SRR4302540.6563964/1‑94 (MQ=60)
      GCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATC                                                                                         >  SRR4302540.6678914/1‑94 (MQ=60)
      GCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATC                                                                                         >  SRR4302540.6263097/1‑94 (MQ=60)
      GCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATC                                                                                         >  SRR4302540.1665369/1‑94 (MQ=60)
      GCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATC                                                                                         >  SRR4302540.6678913/1‑94 (MQ=60)
      GCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATC                                                                                         >  SRR4302540.4279742/1‑94 (MQ=60)
       CCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCA                                                                                        <  SRR4302540.2499779/94‑1 (MQ=60)
       CCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCA                                                                                        >  SRR4302540.4175018/1‑94 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       >  SRR4302540.7025587/1‑94 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       <  SRR4302540.9751636/94‑1 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       <  SRR4302540.4691066/94‑1 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       <  SRR4302540.8536497/94‑1 (MQ=60)
         TCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAT                                                                                      <  SRR4302540.4677178/94‑1 (MQ=60)
          CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG                                                                                     >  SRR4302540.5312604/1‑94 (MQ=60)
           ATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGA                                                                                    >  SRR4302540.5980860/1‑94 (MQ=60)
           ATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGA                                                                                    >  SRR4302540.7838082/1‑94 (MQ=60)
           ATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGA                                                                                    >  SRR4302540.1262052/1‑94 (MQ=60)
           ATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGA                                                                                    >  SRR4302540.3253301/1‑94 (MQ=60)
            TCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATCCGGACTTTCTCAAAGGAGGGTTATCAATGAA                                                                                   >  SRR4302540.3395273/1‑94 (MQ=60)
            TCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAA                                                                                   >  SRR4302540.2051607/1‑94 (MQ=60)
             CCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAAT                                                                                  >  SRR4302540.9549990/1‑94 (MQ=60)
              CCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATA                                                                                 >  SRR4302540.7595394/1‑94 (MQ=60)
              CCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATA                                                                                 >  SRR4302540.1186803/1‑94 (MQ=60)
              CCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATA                                                                                 >  SRR4302540.6280724/1‑94 (MQ=60)
               CCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAT                                                                                <  SRR4302540.3556511/94‑1 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              <  SRR4302540.4443/94‑1 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              >  SRR4302540.2534663/1‑94 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              <  SRR4302540.3350051/94‑1 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              <  SRR4302540.5103113/94‑1 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              <  SRR4302540.1086768/94‑1 (MQ=60)
                  TTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCG                                                                             <  SRR4302540.3626957/94‑1 (MQ=60)
                  TTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCG                                                                             <  SRR4302540.3626956/94‑1 (MQ=60)
                  TTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCG                                                                             <  SRR4302540.6733029/94‑1 (MQ=60)
                  TTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCG                                                                             <  SRR4302540.3347649/94‑1 (MQ=60)
                    TCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTC                                                                           <  SRR4302540.4086880/94‑1 (MQ=60)
                    TCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTC                                                                           >  SRR4302540.9910114/1‑94 (MQ=60)
                    TCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTC                                                                           >  SRR4302540.9221652/1‑94 (MQ=60)
                        TGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATT                                                                       >  SRR4302540.1158447/1‑94 (MQ=60)
                         GGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTG                                                                      <  SRR4302540.6396142/94‑1 (MQ=60)
                          GTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGC                                                                     >  SRR4302540.2926627/1‑94 (MQ=60)
                          GTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGC                                                                     >  SRR4302540.2939766/1‑94 (MQ=60)
                            CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCAT                                                                   <  SRR4302540.6993573/94‑1 (MQ=60)
                             CCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATG                                                                  <  SRR4302540.4378264/94‑1 (MQ=60)
                             CCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATG                                                                  <  SRR4302540.1358911/94‑1 (MQ=60)
                             ACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATG                                                                  <  SRR4302540.4944250/94‑1 (MQ=60)
                             ACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATG                                                                  <  SRR4302540.5407194/94‑1 (MQ=60)
                             ACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATG                                                                  <  SRR4302540.4378266/94‑1 (MQ=60)
                              CCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCATTGAATATTCGTCattggatggt                                                                 >  SRR4302540.1266421/1‑84 (MQ=60)
                               CAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTCTCAATGAATATTCGTCCATTGAATGAC                                                                >  SRR4302540.7086662/1‑94 (MQ=60)
                               CAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAT                                                                <  SRR4302540.6620635/94‑1 (MQ=60)
                                AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC                                                               >  SRR4302540.6007881/1‑94 (MQ=60)
                                AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC                                                               <  SRR4302540.702620/94‑1 (MQ=60)
                                 GCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG                                                              <  SRR4302540.2503892/94‑1 (MQ=60)
                                 GCCGGGAAACCACGTAAGCTCCCGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG                                                              <  SRR4302540.2754887/94‑1 (MQ=60)
                                   CGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCG                                                            >  SRR4302540.5085322/1‑94 (MQ=60)
                                     GGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTG                                                          >  SRR4302540.2278947/1‑94 (MQ=60)
                                     GGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTG                                                          <  SRR4302540.1470893/94‑1 (MQ=60)
                                     GGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTG                                                          >  SRR4302540.8428858/1‑94 (MQ=60)
                                     GGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTG                                                          >  SRR4302540.3988333/1‑94 (MQ=60)
                                       AACCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAT                                                        <  SRR4302540.6670692/94‑1 (MQ=60)
                                       AAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAT                                                        >  SRR4302540.9709989/1‑94 (MQ=60)
                                       AAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAT                                                        >  SRR4302540.1423852/1‑94 (MQ=60)
                                       AAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAT                                                        <  SRR4302540.3981307/94‑1 (MQ=60)
                                        AACGACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGACGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       <  SRR4302540.9453770/94‑1 (MQ=60)
                                        AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       <  SRR4302540.8988012/94‑1 (MQ=60)
                                        AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       <  SRR4302540.7536459/94‑1 (MQ=60)
                                        AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       <  SRR4302540.3902179/94‑1 (MQ=60)
                                        AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       <  SRR4302540.690856/94‑1 (MQ=60)
                                         ACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCG                                                      >  SRR4302540.1621972/1‑94 (MQ=60)
                                          CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT                                                     <  SRR4302540.10123952/94‑1 (MQ=60)
                                           CAAGTAAGCTCCAGCGTCACCCATAACAGACACGGACTGTCTCAAAGGAGGGTTATCAATGAACAGTCGTCCATTGCATGATCGCGGGATCGTC                                                    <  SRR4302540.8504256/94‑1 (MQ=60)
                                            ACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCA                                                   <  SRR4302540.2637483/94‑1 (MQ=60)
                                             CGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAA                                                  >  SRR4302540.6377931/1‑94 (MQ=60)
                                             CGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAA                                                  <  SRR4302540.9877666/94‑1 (MQ=60)
                                             CGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAA                                                  <  SRR4302540.881338/94‑1 (MQ=60)
                                              GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG                                                 <  SRR4302540.6012091/94‑1 (MQ=60)
                                              GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG                                                 >  SRR4302540.6222122/1‑94 (MQ=60)
                                               TAAGCTCCGTCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC                                                <  SRR4302540.2647774/94‑1 (MQ=60)
                                               TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC                                                >  SRR4302540.4197398/1‑94 (MQ=60)
                                               TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC                                                <  SRR4302540.1597478/94‑1 (MQ=60)
                                               TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC                                                >  SRR4302540.1034447/1‑94 (MQ=60)
                                               TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTCCATGATCGCGTGATCGTCAAGC                                                >  SRR4302540.1034448/1‑94 (MQ=60)
                                                AAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCG                                               <  SRR4302540.4536441/94‑1 (MQ=60)
                                                  GCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTA                                             >  SRR4302540.8116754/1‑94 (MQ=60)
                                                  GCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTA                                             <  SRR4302540.6884059/94‑1 (MQ=60)
                                                  GCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTA                                             <  SRR4302540.6884054/94‑1 (MQ=60)
                                                   CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTTCATGATCGCGTGATCGTCAAGCGTAA                                            <  SRR4302540.5373622/94‑1 (MQ=60)
                                                   CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAA                                            >  SRR4302540.6302456/1‑94 (MQ=60)
                                                   CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAA                                            <  SRR4302540.3454306/94‑1 (MQ=60)
                                                    TCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAA                                           >  SRR4302540.3285486/1‑94 (MQ=60)
                                                     CCGGCGTCACCCATAACAGATACGGACTTTCTCGAAGGAGGGTTATCAATGAAGATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAG                                          <  SRR4302540.9802018/94‑1 (MQ=60)
                                                     CCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAG                                          <  SRR4302540.4012575/94‑1 (MQ=60)
                                                      CGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGA                                         <  SRR4302540.9893081/94‑1 (MQ=60)
                                                      CGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGA                                         <  SRR4302540.4812860/94‑1 (MQ=60)
                                                       GGTGTCACCCATAACAGATATGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCTTGATCGCGTGtgtgcaaagcgtaaagaa                                        >  SRR4302540.9059387/1‑76 (MQ=60)
                                                        GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       >  SRR4302540.2897947/1‑94 (MQ=60)
                                                        GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       <  SRR4302540.2976907/94‑1 (MQ=60)
                                                        GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       >  SRR4302540.5396584/1‑94 (MQ=60)
                                                        GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       >  SRR4302540.8165805/1‑94 (MQ=60)
                                                        GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       <  SRR4302540.382286/94‑1 (MQ=60)
                                                         CGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGT                                      >  SRR4302540.6452482/1‑94 (MQ=60)
                                                          GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT                                     >  SRR4302540.989276/1‑94 (MQ=60)
                                                          GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT                                     >  SRR4302540.6171403/1‑94 (MQ=60)
                                                          GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT                                     >  SRR4302540.9382455/1‑94 (MQ=60)
                                                          GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT                                     >  SRR4302540.1902600/1‑94 (MQ=60)
                                                           TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG                                    <  SRR4302540.7893572/94‑1 (MQ=60)
                                                           TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG                                    >  SRR4302540.9287254/1‑94 (MQ=60)
                                                           TCACCCATAACAGAGACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG                                    <  SRR4302540.7893571/94‑1 (MQ=60)
                                                            CACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGA                                   >  SRR4302540.3097249/1‑94 (MQ=60)
                                                            CACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGA                                   >  SRR4302540.923014/1‑94 (MQ=60)
                                                             ACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAA                                  <  SRR4302540.7419670/94‑1 (MQ=60)
                                                             ACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAA                                  >  SRR4302540.8115601/1‑94 (MQ=60)
                                                             ACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAA                                  >  SRR4302540.227308/1‑94 (MQ=60)
                                                             ACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAA                                  <  SRR4302540.1554688/94‑1 (MQ=60)
                                                             ACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAA                                  <  SRR4302540.9365328/94‑1 (MQ=60)
                                                              CCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAA                                 >  SRR4302540.1543783/1‑94 (MQ=60)
                                                              CCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAA                                 >  SRR4302540.4147077/1‑94 (MQ=60)
                                                                CATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACT                               <  SRR4302540.9465278/94‑1 (MQ=60)
                                                                CATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGAGTAAAGAAGTTGAAACT                               <  SRR4302540.1658071/94‑1 (MQ=60)
                                                                 ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA                              <  SRR4302540.1048424/94‑1 (MQ=60)
                                                                 ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA                              >  SRR4302540.5577321/1‑94 (MQ=60)
                                                                 ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA                              >  SRR4302540.2744656/1‑94 (MQ=60)
                                                                 ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA                              >  SRR4302540.5296191/1‑94 (MQ=60)
                                                                  TAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAA                             >  SRR4302540.3462333/1‑94 (MQ=60)
                                                                   AACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAA                            >  SRR4302540.5562817/1‑94 (MQ=60)
                                                                   AACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAA                            <  SRR4302540.740934/94‑1 (MQ=60)
                                                                    ACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAT                           <  SRR4302540.591781/94‑1 (MQ=60)
                                                                     CAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATC                          <  SRR4302540.4031930/94‑1 (MQ=60)
                                                                     CAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATC                          <  SRR4302540.4317115/94‑1 (MQ=60)
                                                                     CAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATC                          <  SRR4302540.1208960/94‑1 (MQ=60)
                                                                     CAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATC                          <  SRR4302540.9036836/94‑1 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         <  SRR4302540.7868491/94‑1 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         >  SRR4302540.262708/1‑94 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         <  SRR4302540.1776612/94‑1 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         <  SRR4302540.1628204/94‑1 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         <  SRR4302540.9022831/94‑1 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         >  SRR4302540.642272/1‑94 (MQ=60)
                                                                      AGAAACGGACTTTCTCAAAGGAGGGTTATAAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         <  SRR4302540.7868492/94‑1 (MQ=60)
                                                                         TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT                      >  SRR4302540.2238586/1‑94 (MQ=60)
                                                                         TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT                      >  SRR4302540.7097213/1‑94 (MQ=60)
                                                                         TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT                      <  SRR4302540.2566198/94‑1 (MQ=60)
                                                                          ACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTG                     <  SRR4302540.8955445/94‑1 (MQ=60)
                                                                          ACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTG                     <  SRR4302540.2509419/94‑1 (MQ=60)
                                                                            GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGC                   >  SRR4302540.8227047/1‑94 (MQ=60)
                                                                            GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGC                   >  SRR4302540.3733534/1‑94 (MQ=60)
                                                                              ACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGG                 <  SRR4302540.8636853/94‑1 (MQ=60)
                                                                                TTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCA               >  SRR4302540.1313946/1‑94 (MQ=60)
                                                                                TTTCTCAAAGGAGGGTTATCAATGAATATTCCTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCA               <  SRR4302540.304755/94‑1 (MQ=60)
                                                                                 TTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAT              <  SRR4302540.4948774/94‑1 (MQ=60)
                                                                                  TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC             <  SRR4302540.923575/94‑1 (MQ=60)
                                                                                  TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC             <  SRR4302540.9912778/94‑1 (MQ=60)
                                                                                  TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC             <  SRR4302540.7734649/94‑1 (MQ=60)
                                                                                  TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC             <  SRR4302540.7734355/94‑1 (MQ=60)
                                                                                  TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC             <  SRR4302540.1082240/94‑1 (MQ=60)
                                                                                  TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC             >  SRR4302540.2371010/1‑94 (MQ=60)
                                                                                   CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGCAGTTGAAACTAcagatgctgccggcagcg            >  SRR4302540.2908733/1‑76 (MQ=60)
                                                                                   CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCG            >  SRR4302540.7543444/1‑94 (MQ=60)
                                                                                   CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCG            >  SRR4302540.1541874/1‑94 (MQ=60)
                                                                                   CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCG            >  SRR4302540.2908734/1‑94 (MQ=60)
                                                                                   CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCG            >  SRR4302540.3787255/1‑94 (MQ=60)
                                                                                   CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCG            >  SRR4302540.5733025/1‑94 (MQ=60)
                                                                                    TCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGT           <  SRR4302540.9616319/94‑1 (MQ=60)
                                                                                     CAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTT          <  SRR4302540.9458003/94‑1 (MQ=60)
                                                                                     CAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTT          >  SRR4302540.2453192/1‑94 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         <  SRR4302540.10024240/94‑1 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         <  SRR4302540.8041527/94‑1 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         >  SRR4302540.4986262/1‑94 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         >  SRR4302540.7375775/1‑94 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         <  SRR4302540.8820975/94‑1 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGAGGCATCGTTC         >  SRR4302540.4677303/1‑94 (MQ=60)
                                                                                       AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTANATCTGCTGGCGGCNTCGTTCT        >  SRR4302540.6647422/1‑94 (MQ=60)
                                                                                       AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT        <  SRR4302540.7479978/94‑1 (MQ=60)
                                                                                       AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT        >  SRR4302540.2872238/1‑94 (MQ=60)
                                                                                       AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT        <  SRR4302540.3037229/94‑1 (MQ=60)
                                                                                       AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGACATCGTTCT        <  SRR4302540.1253336/94‑1 (MQ=60)
                                                                                        AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG       >  SRR4302540.6400793/1‑94 (MQ=60)
                                                                                        AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG       <  SRR4302540.8525831/94‑1 (MQ=60)
                                                                                        AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG       >  SRR4302540.6559237/1‑94 (MQ=60)
                                                                                        AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG       >  SRR4302540.5807244/1‑94 (MQ=60)
                                                                                          GAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGAC     <  SRR4302540.5701589/94‑1 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC    <  SRR4302540.3210459/94‑1 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC    >  SRR4302540.3584122/1‑94 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC    <  SRR4302540.3654680/94‑1 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC    <  SRR4302540.4333025/94‑1 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC    <  SRR4302540.4863781/94‑1 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC    >  SRR4302540.10085223/1‑94 (MQ=60)
                                                                                            GGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCG   <  SRR4302540.5724389/94‑1 (MQ=60)
                                                                                            GGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCG   <  SRR4302540.6498775/94‑1 (MQ=60)
                                                                                            GGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCG   <  SRR4302540.1976026/94‑1 (MQ=60)
                                                                                            GGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCG   >  SRR4302540.8832271/1‑94 (MQ=60)
                                                                                             GGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG  <  SRR4302540.6726044/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG  >  NC_000913/4368165‑4368351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: