Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,369,183	A→G	Q194R (CAG→CGG)	mopA →	GroEL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,369,183	0	A	G	100.0%	1254.0 / NA	390	Q194R (CAG→CGG)	mopA	GroEL
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (179/211); total (179/211)

Only 100 of 409 total aligned reads displayed.

AAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTG  >  NC_000913/4369093‑4369272

aaGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGt                                                                                         >  2:5393474/1‑93 (MQ=255)

  gCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTc                                                                                       <  1:180817/93‑1 (MQ=255)

  gCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTc                                                                                       <  2:5124240/93‑1 (MQ=255)

   cGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCg                                                                                      <  2:5739536/93‑1 (MQ=255)

    gATGGACAAAGTCGGTAAAGAAGGTGTTATCACCGTTGAAGACGGTACCGGTCTGCAGTACGAACTGGACGTGGTTGAAGGTATGCGGTTCGa                                                                                     <  2:3566205/93‑1 (MQ=255)

       ggACAAAGTCCGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCg                                                                                  <  1:7510822/93‑1 (MQ=255)

        gACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGt                                                                                 >  2:410720/1‑93 (MQ=255)

        gACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGt                                                                                 <  2:9003667/93‑1 (MQ=255)

          cAAAGTCGGTAAAGAAGGCGTTATCACCGTTTAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTCGAAGGTATGCGTGTCGACCGttg                                                                               >  2:9212186/1‑91 (MQ=255)

           aaaGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGc                                                                              <  2:6206373/93‑1 (MQ=255)

           aaaGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGc                                                                              <  1:4217206/93‑1 (MQ=255)

            aaGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCt                                                                             >  1:4753085/1‑93 (MQ=255)

             aGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTa                                                                            >  1:8288739/1‑93 (MQ=255)

             aGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACAGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTa                                                                            <  1:6349082/93‑1 (MQ=255)

              gTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAc                                                                           >  2:533155/1‑93 (MQ=255)

               tCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAcc                                                                          >  1:9040296/1‑93 (MQ=255)

               tCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAcc                                                                          <  1:1199290/93‑1 (MQ=255)

                cGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCt                                                                         <  2:6001380/93‑1 (MQ=255)

                cGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCt                                                                         <  1:6041347/93‑1 (MQ=255)

                 ggTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTg                                                                        <  1:3690192/93‑1 (MQ=255)

                     aagaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGtctc                                                                    <  2:7497911/93‑1 (MQ=255)

                     aagaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGtctc                                                                    <  2:4920873/93‑1 (MQ=255)

                      agaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTcc                                                                   <  2:7890982/93‑1 (MQ=255)

                      agaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTcc                                                                   <  2:3971559/93‑1 (MQ=255)

                      aaaagGCGGTAACACCGTTGCAAACGGTTGCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGCCCGTGGCTACCGGTCTcc                                                                   <  1:2461664/91‑1 (MQ=255)

                       gaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCt                                                                  >  1:4532444/1‑93 (MQ=255)

                       gaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCt                                                                  <  2:1258691/93‑1 (MQ=255)

                       gaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCt                                                                  <  2:9172403/93‑1 (MQ=255)

                        aagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCtt                                                                 >  1:1023625/1‑93 (MQ=255)

                         agGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGAGGTGGTTGAAGCAATGCGGTTCGACCGTGGGTACCTGTCTCCTTa                                                                >  2:4372986/1‑93 (MQ=255)

                         agGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTa                                                                >  2:4772080/1‑93 (MQ=255)

                         agGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTa                                                                >  1:7198669/1‑93 (MQ=255)

                          ggCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTAc                                                               >  1:5078331/1‑93 (MQ=255)

                          ggCGTTACCCCCGTTGAAGACAGTACCGGCCTGCAGGACGAACTGGACGTGGTTTAAGGTATGCGGTTCGACCGTGGCTCCCTGTCTCCTTAc                                                               <  2:6737104/93‑1 (MQ=255)

                            cGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACtt                                                             <  1:9279693/93‑1 (MQ=255)

                              ttATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGCCCGTGGTTACCTGTCTCCTTACTtca                                                           <  2:4994053/93‑1 (MQ=255)

                              ttATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtca                                                           >  2:9509684/1‑93 (MQ=255)

                              ttATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtca                                                           >  1:3856588/1‑93 (MQ=255)

                               tATCACCGTTGAAGACGGTACCGGTCTGCAGGACGACCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTCCCTGTCTCcttccttcct                                                          >  1:8464911/1‑91 (MQ=255)

                               tATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcat                                                          >  1:494331/1‑93 (MQ=255)

                               tATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcat                                                          >  1:3003679/1‑93 (MQ=255)

                                aTCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcatc                                                         >  1:7048606/1‑93 (MQ=255)

                                  cACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaa                                                       >  2:1146562/1‑93 (MQ=255)

                                  cACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTAATcaa                                                       >  2:6494895/1‑93 (MQ=255)

                                    ccGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaaca                                                     <  2:2547485/93‑1 (MQ=255)

                                     cGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaacaa                                                    <  1:6152536/93‑1 (MQ=255)

                                     cGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaacaa                                                    >  1:8010396/1‑93 (MQ=255)

                                       ttGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGc                                                  >  1:9662542/1‑93 (MQ=255)

                                        tGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGcc                                                 <  1:1465898/93‑1 (MQ=255)

                                          aaGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCgg                                               >  1:8818601/1‑93 (MQ=255)

                                          aaGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCgg                                               <  1:1272540/93‑1 (MQ=255)

                                           aGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGa                                              >  2:1920793/1‑93 (MQ=255)

                                            gACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGaa                                             <  2:3243273/93‑1 (MQ=255)

                                              cGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAc                                           <  1:3132374/93‑1 (MQ=255)

                                               ggTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACt                                          <  1:9902412/93‑1 (MQ=255)

                                                gTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTg                                         <  1:1316847/93‑1 (MQ=255)

                                                gTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTg                                         >  1:5181677/1‑93 (MQ=255)

                                                   ccGGTCTGCGGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGgcg                                      <  1:6631901/93‑1 (MQ=255)

                                                   ccGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGgcg                                      <  2:2447735/93‑1 (MQ=255)

                                                    cGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGgcgc                                     >  2:930428/1‑93 (MQ=255)

                                                    cGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGgcgc                                     >  1:1599744/1‑93 (MQ=255)

                                                     ggTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCa                                    <  2:7714898/93‑1 (MQ=255)

                                                     ggTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCa                                    >  1:7408862/1‑93 (MQ=255)

                                                      gTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAg                                   <  1:4024292/93‑1 (MQ=255)

                                                       tCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAgg                                  >  2:2709216/1‑92 (MQ=255)

                                                        cggCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTa                                 <  2:5219347/91‑1 (MQ=255)

                                                        cTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTa                                 <  2:8470062/93‑1 (MQ=255)

                                                            aGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAc                             >  2:9644048/1‑93 (MQ=255)

                                                            aGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAc                             <  2:6640625/93‑1 (MQ=255)

                                                            aGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAc                             >  1:5713127/1‑93 (MQ=255)

                                                             ggACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACt                            >  1:7103601/1‑93 (MQ=255)

                                                             ggACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACt                            >  2:2996195/1‑93 (MQ=255)

                                                              gACGAACGGGACGGGGGGGAAGGGAGGCGGGCCGACCGGGGCGACCCGCCCCCGGACGCCAGCAACAAGCCGGAAACCGGCGCAGGAGAACTg                           >  1:7704243/1‑93 (MQ=255)

                                                                 gAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGaa                        >  1:3410871/1‑93 (MQ=255)

                                                                  aaCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGaaa                       <  1:324071/93‑1 (MQ=255)

                                                                    cTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGACTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGaaaac                     <  2:8921289/93‑3 (MQ=255)

                                                                       gACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCg                  >  2:3702919/1‑93 (MQ=255)

                                                                        aCGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGt                 >  1:2265988/1‑93 (MQ=255)

                                                                        aCGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGt                 >  2:2259988/1‑93 (MQ=255)

                                                                         cGTGGTTGAAGGTATGCGGTTCGACCGTGGCTCCCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGtt                <  2:8018947/93‑1 (MQ=255)

                                                                         cGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGtt                >  1:8243131/1‑93 (MQ=255)

                                                                          gTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTc               <  1:2054742/93‑1 (MQ=255)

                                                                           tGGTTGAAGGTATGGGGTTCGACCGTGGTTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCa              <  1:2699677/93‑1 (MQ=255)

                                                                           tGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCa              >  1:3603199/1‑93 (MQ=255)

                                                                             gTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATc            >  2:1835577/1‑93 (MQ=255)

                                                                               tGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCct          <  2:8831776/93‑1 (MQ=255)

                                                                               tGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCct          >  2:8186235/1‑93 (MQ=255)

                                                                                gAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctg         >  2:4620191/1‑93 (MQ=255)

                                                                                  aGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgct       <  1:4140267/93‑1 (MQ=255)

                                                                                  aGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgct       <  2:7383868/93‑1 (MQ=255)

                                                                                  aGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgct       <  2:7107014/93‑1 (MQ=255)

                                                                                   ggTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgctg      >  1:4372692/1‑93 (MQ=255)

                                                                                   ggTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgctg      <  1:8621738/93‑1 (MQ=255)

                                                                                    gTATGCGGTTGGGCCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctgg     <  2:3095116/93‑1 (MQ=255)

                                                                                    gTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctgg     >  1:2628769/1‑93 (MQ=255)

                                                                                    gTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctgg     >  2:6910638/1‑93 (MQ=255)

                                                                                     tATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggc    <  1:5389575/93‑1 (MQ=255)

                                                                                     tATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggc    >  1:7818993/1‑93 (MQ=255)

                                                                                      aTGCGGTTCCACCGTGGCTACCTGTCTCCTTAATTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGCAAAGCCCGTTCATCCTgctggat   >  2:219536/1‑91 (MQ=255)

                                                                                       tGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggctg  >  2:1724683/1‑93 (MQ=255)

AAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTG  >  NC_000913/4369093‑4369272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 220 total aligned reads displayed.

CTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  NC_000913/4369090‑4369276

CTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCG                                                                                               <  SRR4302540.2562098/94‑1 (MQ=60)

CTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCG                                                                                               >  SRR4302540.8021462/1‑94 (MQ=60)

CTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCG                                                                                               >  SRR4302540.3453056/1‑94 (MQ=60)

 TGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGG                                                                                              >  SRR4302540.4807962/1‑94 (MQ=60)

 TGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGG                                                                                              >  SRR4302540.4807961/1‑94 (MQ=60)

   AAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTT                                                                                            <  SRR4302540.4841945/94‑1 (MQ=60)

    AGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGGATGCGGTTC                                                                                           >  SRR4302540.2376116/1‑94 (MQ=60)

     GCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCG                                                                                          <  SRR4302540.182618/94‑1 (MQ=60)

      CGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGA                                                                                         >  SRR4302540.3301464/1‑94 (MQ=60)

      CGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGA                                                                                         >  SRR4302540.3301462/1‑94 (MQ=60)

      CGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGA                                                                                         >  SRR4302540.1225446/1‑94 (MQ=60)

      CGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGA                                                                                         >  SRR4302540.7129689/1‑94 (MQ=60)

       GATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGAC                                                                                        >  SRR4302540.7938351/1‑94 (MQ=60)

        ATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGCAGGTATGCGGTTCGACC                                                                                       >  SRR4302540.4458391/1‑94 (MQ=60)

        ATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACC                                                                                       >  SRR4302540.7176142/1‑94 (MQ=60)

        ATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACC                                                                                       >  SRR4302540.8357398/1‑94 (MQ=60)

         TGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCG                                                                                      >  SRR4302540.8279316/1‑94 (MQ=60)

          GGACAAAGTCCGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGT                                                                                     <  SRR4302540.7594779/94‑1 (MQ=60)

           GACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTG                                                                                    <  SRR4302540.5140847/94‑1 (MQ=60)

           GACAAAGTCGGTAAAGAAGGCGTTATCACCGTTCAAGACGGTCCCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTG                                                                                    <  SRR4302540.5140848/94‑1 (MQ=60)

           GAAAAAGCCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTG                                                                                    <  SRR4302540.1167127/94‑1 (MQ=60)

             CAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGC                                                                                  >  SRR4302540.1578872/1‑94 (MQ=60)

             CAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGC                                                                                  >  SRR4302540.4662533/1‑94 (MQ=60)

             CAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGC                                                                                  >  SRR4302540.5051882/1‑94 (MQ=60)

             CAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGC                                                                                  >  SRR4302540.4662534/1‑94 (MQ=60)

              AAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCT                                                                                 <  SRR4302540.4263116/94‑1 (MQ=60)

              AAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCT                                                                                 <  SRR4302540.8573913/94‑1 (MQ=60)

              AAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCT                                                                                 <  SRR4302540.1338807/94‑1 (MQ=60)

              AAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCT                                                                                 >  SRR4302540.4803804/1‑94 (MQ=60)

              AAAGTCGGTAAAGAAGGCGGTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCT                                                                                 <  SRR4302540.1338806/94‑1 (MQ=60)

               AAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTA                                                                                >  SRR4302540.8384997/1‑94 (MQ=60)

                AGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACAGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAC                                                                               <  SRR4302540.6419788/94‑1 (MQ=60)

                 GTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACC                                                                              >  SRR4302540.9148814/1‑94 (MQ=60)

                  TCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCT                                                                             <  SRR4302540.1211625/94‑1 (MQ=60)

                  TCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCT                                                                             <  SRR4302540.4298220/94‑1 (MQ=60)

                  TCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGGACCGGGCCGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGGTACCT                                                                             <  SRR4302540.7538924/94‑1 (MQ=60)

                   CGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTG                                                                            <  SRR4302540.1293451/94‑1 (MQ=60)

                   CGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTG                                                                            <  SRR4302540.6108440/94‑1 (MQ=60)

                   CGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTG                                                                            >  SRR4302540.8216978/1‑94 (MQ=60)

                    GGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGT                                                                           <  SRR4302540.3730499/94‑1 (MQ=60)

                     GTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTC                                                                          >  SRR4302540.2222413/1‑94 (MQ=60)

                      TAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCT                                                                         >  SRR4302540.4575126/1‑94 (MQ=60)

                      TAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCT                                                                         <  SRR4302540.4400753/94‑1 (MQ=60)

                       AAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTC                                                                        <  SRR4302540.7218643/94‑1 (MQ=60)

                       AAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTC                                                                        >  SRR4302540.3079771/1‑94 (MQ=60)

                        AAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCC                                                                       <  SRR4302540.3573851/94‑1 (MQ=60)

                        AAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCC                                                                       <  SRR4302540.9827502/94‑1 (MQ=60)

                         aaaaggcggtaacaccgttgcaaacggttgCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGCCCGTGGCTACCGGTCTCCT                                                                      <  SRR4302540.2488161/64‑1 (MQ=60)

                         AGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCT                                                                      >  SRR4302540.4581500/1‑94 (MQ=60)

                         AGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCT                                                                      <  SRR4302540.788043/94‑1 (MQ=60)

                         AGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGGATGCGGGTCGACCGGGGCTGCCTGTCTCCT                                                                      >  SRR4302540.831096/1‑94 (MQ=60)

                          GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTT                                                                     <  SRR4302540.2801268/94‑1 (MQ=60)

                          GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTT                                                                     >  SRR4302540.8829978/1‑94 (MQ=60)

                          GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTT                                                                     <  SRR4302540.7162338/94‑1 (MQ=60)

                          GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTT                                                                     >  SRR4302540.1034011/1‑94 (MQ=60)

                           AAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTC                                                                    >  SRR4302540.7438875/1‑94 (MQ=60)

                           AAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTA                                                                    >  SRR4302540.7278920/1‑94 (MQ=60)

                            AGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTAC                                                                   >  SRR4302540.5133236/1‑94 (MQ=60)

                              GCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTT                                                                 >  SRR4302540.4242583/1‑94 (MQ=60)

                               CGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTC                                                                <  SRR4302540.9390613/94‑1 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302540.1253121/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302540.8680600/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302540.3898515/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302540.2710748/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302540.5447760/1‑94 (MQ=60)

                                 TTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGACCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTCCCTGTCTCCTTCCTTCCT                                                              >  SRR4302540.8563194/1‑94 (MQ=60)

                                 TTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCAT                                                              >  SRR4302540.499632/1‑94 (MQ=60)

                                 TTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCAT                                                              >  SRR4302540.3684438/1‑94 (MQ=60)

                                 TTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCAT                                                              >  SRR4302540.8563193/1‑94 (MQ=60)

                                 TTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCAT                                                              <  SRR4302540.8551455/94‑1 (MQ=60)

                                  TATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATC                                                             <  SRR4302540.8594105/94‑1 (MQ=60)

                                  TATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATC                                                             >  SRR4302540.7126992/1‑94 (MQ=60)

                                   TTCACCTTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTCACTTCATCA                                                            <  SRR4302540.2851987/94‑1 (MQ=60)

                                   ATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCA                                                            <  SRR4302540.3542418/94‑1 (MQ=60)

                                   ATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCA                                                            >  SRR4302540.9607290/1‑94 (MQ=60)

                                   ATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCA                                                            >  SRR4302540.2691875/1‑94 (MQ=60)

                                     cacgtgTGAAGACGGTACCGGTCTGCAGGACGGACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAAC                                                          <  SRR4302540.7789066/88‑1 (MQ=60)

                                     CACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAAC                                                          >  SRR4302540.3951260/1‑94 (MQ=60)

                                      ACCGTTGAAGACGATACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCAGTCTCCTTACTTCATCATCA                                                         <  SRR4302540.9037807/94‑1 (MQ=60)

                                       CCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAA                                                        <  SRR4302540.5699385/94‑1 (MQ=60)

                                       CCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAA                                                        <  SRR4302540.5966378/94‑1 (MQ=60)

                                       CCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAA                                                        >  SRR4302540.3699025/1‑94 (MQ=60)

                                       CCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAA                                                        >  SRR4302540.8103584/1‑94 (MQ=60)

                                        CGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAG                                                       >  SRR4302540.2008045/1‑94 (MQ=60)

                                        CGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAG                                                       <  SRR4302540.6221068/94‑1 (MQ=60)

                                        CGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAG                                                       <  SRR4302540.9384372/94‑1 (MQ=60)

                                         GTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGC                                                      >  SRR4302540.6197655/1‑94 (MQ=60)

                                         GTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGC                                                      >  SRR4302540.9776278/1‑94 (MQ=60)

                                          TTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302540.4228321/94‑1 (MQ=60)

                                          TTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302540.8439757/94‑1 (MQ=60)

                                          TTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302540.1136400/94‑1 (MQ=60)

                                          TTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302540.6156423/94‑1 (MQ=60)

                                          TTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302540.4228323/94‑1 (MQ=60)

                                          TCGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302540.4174498/94‑1 (MQ=60)

                                           TGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCG                                                    >  SRR4302540.4448832/1‑94 (MQ=60)

                                           TGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCG                                                    <  SRR4302540.1481890/94‑1 (MQ=60)

                                           TGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCG                                                    <  SRR4302540.2525194/94‑1 (MQ=60)

                                           TGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCG                                                    <  SRR4302540.2525193/94‑1 (MQ=60)

                                           TGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCG                                                    >  SRR4302540.1497903/1‑94 (MQ=60)

                                            GAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGG                                                   >  SRR4302540.4283659/1‑94 (MQ=60)

                                            GAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGG                                                   >  SRR4302540.8920562/1‑94 (MQ=60)

                                             AAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGA                                                  <  SRR4302540.1285645/94‑1 (MQ=60)

                                              AGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAA                                                 >  SRR4302540.3094182/1‑94 (MQ=60)

                                              AGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAA                                                 >  SRR4302540.6723579/1‑94 (MQ=60)

                                              AGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAA                                                 >  SRR4302540.2437372/1‑94 (MQ=60)

                                                ACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAC                                               <  SRR4302540.8953534/94‑1 (MQ=60)

                                                ACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAC                                               <  SRR4302540.4975119/94‑1 (MQ=60)

                                                ACGGTACCGGTCGGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAC                                               <  SRR4302540.5076574/94‑1 (MQ=60)

                                                 CGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACT                                              >  SRR4302540.6385968/1‑94 (MQ=60)

                                                 CGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACT                                              <  SRR4302540.3166553/94‑1 (MQ=60)

                                                 CGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACT                                              <  SRR4302540.1717531/94‑1 (MQ=60)

                                                  GGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTG                                             >  SRR4302540.5238081/1‑94 (MQ=60)

                                                  GGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTG                                             >  SRR4302540.5338527/1‑94 (MQ=60)

                                                  GGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTG                                             >  SRR4302540.5677688/1‑94 (MQ=60)

                                                  GGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTG                                             <  SRR4302540.10018107/94‑1 (MQ=60)

                                                   GTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGG                                            <  SRR4302540.1330548/94‑1 (MQ=60)

                                                    TACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC                                           <  SRR4302540.5011674/94‑1 (MQ=60)

                                                    TACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC                                           >  SRR4302540.898153/1‑94 (MQ=60)

                                                    TACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC                                           >  SRR4302540.7304069/1‑94 (MQ=60)

                                                     TCCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCG                                          <  SRR4302540.704126/94‑1 (MQ=60)

                                                      CCGGTCTGCGGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGC                                         <  SRR4302540.6705308/94‑1 (MQ=60)

                                                      CCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGC                                         >  SRR4302540.1617244/1‑94 (MQ=60)

                                                       CGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCA                                        >  SRR4302540.7491392/1‑94 (MQ=60)

                                                        GGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAG                                       >  SRR4302540.9234463/1‑94 (MQ=60)

                                                        GGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAG                                       <  SRR4302540.3211436/94‑1 (MQ=60)

                                                         GTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGT                                      <  SRR4302540.4067669/94‑1 (MQ=60)

                                                         GTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGT                                      <  SRR4302540.7660396/94‑1 (MQ=60)

                                                          TCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTA                                     <  SRR4302540.7742848/94‑1 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    >  SRR4302540.7883604/1‑94 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    <  SRR4302540.4820396/94‑1 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    <  SRR4302540.79770/94‑1 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    <  SRR4302540.7226447/94‑1 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCCTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    >  SRR4302540.7205869/1‑94 (MQ=60)

                                                             GCAGTACGAACTGTGCGTGGCTGAAGCTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAGGCCGGAAACTGGCGCAGTAGAA                                  <  SRR4302540.3813772/94‑1 (MQ=60)

                                                             GCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAA                                  <  SRR4302540.1729031/94‑1 (MQ=60)

                                                             GCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAA                                  >  SRR4302540.6806540/1‑94 (MQ=60)

                                                             GCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAA                                  <  SRR4302540.3813773/94‑1 (MQ=60)

                                                              CAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAC                                 <  SRR4302540.9691176/94‑1 (MQ=60)

                                                              CAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAC                                 >  SRR4302540.5776016/1‑94 (MQ=60)

                                                               AGGACGAACTGTACGTGATGGAAGGTATGCGGTTCGACCTTGGCTACCTGTCGCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACT                                <  SRR4302540.4119785/94‑1 (MQ=60)

                                                               AGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACT                                <  SRR4302540.6281835/94‑1 (MQ=60)

                                                               AGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACT                                <  SRR4302540.2696741/94‑1 (MQ=60)

                                                               AGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACT                                <  SRR4302540.1438263/94‑1 (MQ=60)

                                                               AGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACT                                <  SRR4302540.4119786/94‑1 (MQ=60)

                                                               AGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACT                                >  SRR4302540.5183669/1‑94 (MQ=60)

                                                               AGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGGCTCATTACTCCATCAACAAGCCGGAAACTGccgccgcacgact                                >  SRR4302540.2764974/1‑81 (MQ=60)

                                                               AGGACGAACTGGACGTGGGTGAAGGAATGCGGTTCAACCGTGGCTACCTGTCTCCTTACTTCTTCAACAAGCCGGAAAATGACGAAGGAGAACT                                >  SRR4302540.1756987/1‑94 (MQ=60)

                                                                GGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTG                               >  SRR4302540.3668263/1‑94 (MQ=60)

                                                                 GACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGG                              <  SRR4302540.5581260/94‑1 (MQ=60)

                                                                  ACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGA                             <  SRR4302540.9515578/94‑1 (MQ=60)

                                                                  ACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGA                             <  SRR4302540.9835908/94‑1 (MQ=60)

                                                                   CGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAA                            >  SRR4302540.3448020/1‑94 (MQ=60)

                                                                    GAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAA                           >  SRR4302540.1261106/1‑94 (MQ=60)

                                                                    GAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAA                           >  SRR4302540.6145771/1‑94 (MQ=60)

                                                                    GAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAA                           <  SRR4302540.6355583/94‑1 (MQ=60)

                                                                    GAACTGGACGTGGTTGAAGGTATGCGGCTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAA                           >  SRR4302540.1579170/1‑94 (MQ=60)

                                                                     AACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAG                          <  SRR4302540.327319/94‑1 (MQ=60)

                                                                       CTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCC                        >  SRR4302540.1083134/1‑94 (MQ=60)

                                                                        TGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCC                       <  SRR4302540.3259278/94‑1 (MQ=60)

                                                                        TGGACGTGGTTGAAGGCATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGACAGCCC                       >  SRR4302540.7687703/1‑94 (MQ=60)

                                                                        TGGACGTGGTTGAAGCTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCC                       <  SRR4302540.749815/94‑1 (MQ=60)

                                                                          GACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGT                     <  SRR4302540.2264799/94‑1 (MQ=60)

                                                                          GACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGT                     >  SRR4302540.2290306/1‑94 (MQ=60)

                                                                          GACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGT                     >  SRR4302540.8381286/1‑94 (MQ=60)

                                                                           ACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTT                    >  SRR4302540.8338934/1‑94 (MQ=60)

                                                                           ACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTT                    >  SRR4302540.3908677/1‑94 (MQ=60)

                                                                           ACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTT                    >  SRR4302540.3121816/1‑94 (MQ=60)

                                                                            CGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTC                   <  SRR4302540.6866689/94‑1 (MQ=60)

                                                                             GTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCA                  >  SRR4302540.3642574/1‑94 (MQ=60)

                                                                             GTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCA                  <  SRR4302540.1733546/94‑1 (MQ=60)

                                                                             GTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCA                  <  SRR4302540.2076859/94‑1 (MQ=60)

                                                                              TGGTTGAAGGTATGGGGTTCGACCGTGGTTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCAT                 <  SRR4302540.2728815/94‑1 (MQ=60)

                                                                              TGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCAT                 >  SRR4302540.1998638/1‑94 (MQ=60)

                                                                              TGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCAT                 >  SRR4302540.1998637/1‑94 (MQ=60)

                                                                                 TTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCT              <  SRR4302540.4795430/94‑1 (MQ=60)

                                                                                 TTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCT              <  SRR4302540.8857562/94‑1 (MQ=60)

                                                                                   GAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGC            >  SRR4302540.789412/1‑94 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          <  SRR4302540.2981426/94‑1 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          <  SRR4302540.3206763/94‑1 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          >  SRR4302540.4420188/1‑94 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          <  SRR4302540.2452831/94‑1 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          >  SRR4302540.2838112/1‑94 (MQ=60)

                                                                                     AGGCATGCGGTTCGCCCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          <  SRR4302540.6649045/94‑1 (MQ=60)

                                                                                      GGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGG         <  SRR4302540.8721891/94‑1 (MQ=60)

                                                                                      GGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGG         >  SRR4302540.2657216/1‑94 (MQ=60)

                                                                                      GGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGACCGTTCATCCTGCTGG         >  SRR4302540.1313922/1‑94 (MQ=60)

                                                                                       GTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGC        >  SRR4302540.8830048/1‑94 (MQ=60)

                                                                                       GTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGC        >  SRR4302540.3957287/1‑94 (MQ=60)

                                                                                       GTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGC        >  SRR4302540.6605657/1‑94 (MQ=60)

                                                                                       GTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGC        >  SRR4302540.5881774/1‑94 (MQ=60)

                                                                                        TATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCT       <  SRR4302540.5448846/94‑1 (MQ=60)

                                                                                        TATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCT       <  SRR4302540.7430326/94‑1 (MQ=60)

                                                                                        TATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCT       <  SRR4302540.3630823/94‑1 (MQ=60)

                                                                                         ATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTG      >  SRR4302540.8050952/1‑94 (MQ=60)

                                                                                           GCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGAC    <  SRR4302540.5606087/94‑1 (MQ=60)

                                                                                            CGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACA   <  SRR4302540.9545909/94‑1 (MQ=60)

                                                                                            CGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACA   >  SRR4302540.7720628/1‑94 (MQ=60)

                                                                                            CGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACA   >  SRR4302540.8568002/1‑94 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  SRR4302540.8065784/1‑94 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  SRR4302540.7698106/1‑94 (MQ=60)

CTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  NC_000913/4369090‑4369276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`