Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,369,637	T→C	R345R (CGT→CGC)	mopA →	GroEL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,369,637	0	T	C	99.8%	1257.4 / ‑5.4	394	R345R (CGT→CGC)	mopA	GroEL
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (208/185); total (209/185)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.68e-01

Only 100 of 413 total aligned reads displayed.

AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG  >  NC_000913/4369547‑4369726

 gACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGtt                                                                                        >  1:3422363/1‑93 (MQ=255)

    cTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCt                                                                                     >  2:2124974/1‑93 (MQ=255)

    cTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCt                                                                                     >  2:6315046/1‑93 (MQ=255)

     tGGGTCTGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTc                                                                                    <  1:9344604/93‑1 (MQ=255)

     tGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTc                                                                                    >  1:3588841/1‑93 (MQ=255)

     tGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTc                                                                                    >  1:1450719/1‑93 (MQ=255)

      gggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCa                                                                                   <  2:3499848/93‑1 (MQ=255)

       ggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAg                                                                                  <  2:5989898/93‑1 (MQ=255)

        gTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGa                                                                                 <  1:6385001/93‑1 (MQ=255)

        gTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGa                                                                                 <  1:9046768/93‑1 (MQ=255)

         tCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAt                                                                                >  2:8029250/1‑93 (MQ=255)

          cAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATc                                                                               <  2:1855943/93‑1 (MQ=255)

            ggCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCg                                                                             >  1:7306137/1‑93 (MQ=255)

            ggCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCg                                                                             >  1:4373159/1‑93 (MQ=255)

             gCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCgc                                                                            >  1:5401576/1‑92 (MQ=255)

               tAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcg                                                                          >  2:2552036/1‑92 (MQ=255)

                 aaCGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcagc                                                                        >  2:3015813/1‑93 (MQ=255)

                 aaCGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcagc                                                                        >  2:6500103/1‑93 (MQ=255)

                 aaCGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcagc                                                                        >  1:3988755/1‑93 (MQ=255)

                    gtgtTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGa                                                                     <  1:8690348/93‑1 (MQ=255)

                     tgttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAt                                                                    >  1:1022326/1‑93 (MQ=255)

                      gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAtt                                                                   >  1:3656171/1‑93 (MQ=255)

                      gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAtt                                                                   >  2:4782777/1‑93 (MQ=255)

                       ttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTg                                                                  >  1:2609464/1‑93 (MQ=255)

                        tgtgATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTga                                                                 <  1:5783738/93‑1 (MQ=255)

                         gtgATCAACAAAGACACCACCACTATCATCGATGGCGTGGGGGAAGAAGCTGCAACCCAGGGCCGCGTTGCTCAGATCCGTCCGCAGATTgaa                                                                >  1:3016408/1‑93 (MQ=255)

                            aTCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTgaagaa                                                             <  1:3522941/93‑1 (MQ=255)

                             tCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGaagaag                                                            <  2:370101/93‑1 (MQ=255)

                             tCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGaagaag                                                            >  2:1599576/1‑93 (MQ=255)

                             tCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGaagaag                                                            >  1:9585829/1‑93 (MQ=255)

                              caacaaAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGc                                                           >  2:8655357/1‑93 (MQ=255)

                               aacaaAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCa                                                          >  1:1650561/1‑93 (MQ=255)

                               aacaaAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCa                                                          <  1:7885142/93‑1 (MQ=255)

                                acaaAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCaa                                                         <  2:971660/93‑1 (MQ=255)

                                  aaaGCCGCCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACt                                                       <  1:819697/93‑1 (MQ=255)

                                  aaaGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACt                                                       <  1:1159284/93‑1 (MQ=255)

                                   aaGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACtt                                                      >  1:502069/1‑93 (MQ=255)

                                      acacCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTg                                                   <  2:5765733/93‑1 (MQ=255)

                                        agcaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAc                                                 <  1:3214531/91‑1 (MQ=255)

                                          caccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTa                                               <  2:8853642/93‑1 (MQ=255)

                                          caccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTa                                               <  2:8740873/93‑1 (MQ=255)

                                          caccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTa                                               <  2:3876511/93‑1 (MQ=255)

                                          caccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTa                                               <  2:5141265/93‑1 (MQ=255)

                                          caccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTa                                               >  2:6151911/1‑93 (MQ=255)

                                             cacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGa                                            >  1:6534366/1‑93 (MQ=255)

                                              acTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAc                                           >  1:430372/1‑93 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAcag                                         >  2:5442589/1‑91 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCg                                         >  2:6812632/1‑93 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCg                                         >  2:4405934/1‑93 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCg                                         >  2:8424965/1‑93 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCg                                         <  1:9549999/93‑1 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCg                                         >  1:1817740/1‑93 (MQ=255)

                                                 atcatcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGt                                        <  2:3627464/93‑1 (MQ=255)

                                                 atcatcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGt                                        >  1:4613527/1‑93 (MQ=255)

                                                 atcatcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGt                                        <  1:1262767/93‑1 (MQ=255)

                                                   catgGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGa                                      <  2:3175451/93‑1 (MQ=255)

                                                    atcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaa                                     >  2:8190635/1‑93 (MQ=255)

                                                    atcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaa                                     >  1:2349368/1‑93 (MQ=255)

                                                     tcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaa                                    >  2:2907952/1‑93 (MQ=255)

                                                     tcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaa                                    >  2:7009327/1‑93 (MQ=255)

                                                       gATGGCGTGGGTGAAGAAGATGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCATCTTCTGACTACGACCGTGaaaaa                                  <  1:9189292/93‑1 (MQ=255)

                                                        aTGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAc                                 >  1:4768839/1‑93 (MQ=255)

                                                        aTGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAc                                 <  1:5605793/93‑1 (MQ=255)

                                                        aTGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAc                                 >  1:6117900/1‑93 (MQ=255)

                                                            ggTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCa                             <  1:2694649/92‑1 (MQ=255)

                                                            cGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCa                             <  2:9610595/93‑1 (MQ=255)

                                                             gTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAg                            <  1:9921605/93‑1 (MQ=255)

                                                             gTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAg                            >  1:2221423/1‑93 (MQ=255)

                                                              tGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGGCTACGACCGTGAAAAACTGCAgg                           >  2:7227204/1‑93 (MQ=255)

                                                              tGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAgg                           >  2:1435115/1‑93 (MQ=255)

                                                              tGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAgg                           >  1:9490491/1‑93 (MQ=255)

                                                                ggTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGaa                         <  1:624272/93‑1 (MQ=255)

                                                                ggTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGaa                         <  2:9348771/93‑1 (MQ=255)

                                                                 gTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAc                        >  1:240745/1‑93 (MQ=255)

                                                                  tGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcg                       >  1:676384/1‑93 (MQ=255)

                                                                  tGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcg                       <  2:2687490/93‑1 (MQ=255)

                                                                   gaagaaGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcgc                      >  2:5736496/1‑93 (MQ=255)

                                                                   gaagaaGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcgc                      >  1:2844981/1‑93 (MQ=255)

                                                                    aagaagCTGCAATCCAGGTCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcgcg                     <  1:7992915/93‑1 (MQ=255)

                                                                    aagaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcgcg                     >  2:3258731/1‑93 (MQ=255)

                                                                     agaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGt                    >  2:2328705/1‑93 (MQ=255)

                                                                     agaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGt                    <  2:9004067/93‑1 (MQ=255)

                                                                      gaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTa                   <  2:2417805/93‑1 (MQ=255)

                                                                        agCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGc                 <  1:7123417/93‑1 (MQ=255)

                                                                        agCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGc                 <  2:3414831/93‑1 (MQ=255)

                                                                           tGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaa              >  1:9824510/1‑93 (MQ=255)

                                                                           tGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaa              <  2:5902443/93‑1 (MQ=255)

                                                                            gCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaaa             <  2:4184498/93‑1 (MQ=255)

                                                                             cAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAAc            <  2:7361811/93‑1 (MQ=255)

                                                                              aaTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACt           <  1:7500667/93‑1 (MQ=255)

                                                                               aTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTg          <  1:5924545/93‑1 (MQ=255)

                                                                                tCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTgg         >  1:7641053/1‑93 (MQ=255)

                                                                                 ccAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGc        >  2:4537897/1‑93 (MQ=255)

                                                                                 ccAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGc        >  2:5534719/1‑93 (MQ=255)

                                                                                    gggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAgg     >  1:804845/1‑93 (MQ=255)

                                                                                    gggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAgg     <  1:3326919/93‑1 (MQ=255)

                                                                                     ggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAggc    <  1:2021070/93‑1 (MQ=255)

                                                                                     ggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAggc    <  2:7817943/93‑1 (MQ=255)

                                                                                     ggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAggc    <  1:1854981/93‑1 (MQ=255)

                                                                                     ggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAggc    <  1:8935160/93‑1 (MQ=255)

AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG  >  NC_000913/4369547‑4369726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 233 total aligned reads displayed.

GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTT  >  NC_000913/4369544‑4369730

GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGC                                                                                               >  SRR4302540.2559792/1‑94 (MQ=60)

GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGC                                                                                               >  SRR4302540.9353900/1‑94 (MQ=60)

  AAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGT                                                                                             <  SRR4302540.4185031/94‑1 (MQ=60)

   AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTT                                                                                            >  SRR4302540.3459576/1‑94 (MQ=60)

   AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTT                                                                                            <  SRR4302540.8143507/94‑1 (MQ=60)

      CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                         >  SRR4302540.2414113/1‑94 (MQ=60)

      CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                         >  SRR4302540.3434281/1‑94 (MQ=60)

      CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                         >  SRR4302540.7649644/1‑94 (MQ=60)

      CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                         >  SRR4302540.7649643/1‑94 (MQ=60)

      CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                         >  SRR4302540.6558503/1‑94 (MQ=60)

       CTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTC                                                                                        >  SRR4302540.3281571/1‑94 (MQ=60)

       CTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTC                                                                                        >  SRR4302540.3281572/1‑94 (MQ=60)

       CTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTC                                                                                        >  SRR4302540.981510/1‑94 (MQ=60)

       CTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTC                                                                                        >  SRR4302540.1466492/1‑94 (MQ=60)

       CTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTC                                                                                        >  SRR4302540.3628048/1‑94 (MQ=60)

        TGGGTCTGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCA                                                                                       <  SRR4302540.9455932/94‑1 (MQ=60)

        TGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCA                                                                                       <  SRR4302540.8343179/94‑1 (MQ=60)

        TGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCA                                                                                       >  SRR4302540.2711615/1‑94 (MQ=60)

        TGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCA                                                                                       <  SRR4302540.6054209/94‑1 (MQ=60)

         GGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAG                                                                                      <  SRR4302540.9275131/94‑1 (MQ=60)

           gttaagtcaaacgttgTGTGATCAACAAAGACACCACCCCTATCCTCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAT                                                                                    <  SRR4302540.2765892/78‑1 (MQ=60)

           GTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAT                                                                                    <  SRR4302540.6471886/94‑1 (MQ=60)

           GTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAT                                                                                    >  SRR4302540.820715/1‑94 (MQ=60)

           GTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAT                                                                                    <  SRR4302540.6456079/94‑1 (MQ=60)

           GTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAT                                                                                    <  SRR4302540.2765893/94‑1 (MQ=60)

            TCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATC                                                                                   >  SRR4302540.5121591/1‑94 (MQ=60)

            TCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATC                                                                                   >  SRR4302540.6224108/1‑94 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                                  <  SRR4302540.3606945/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                                  <  SRR4302540.7332474/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                                  <  SRR4302540.4653704/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                                  <  SRR4302540.9282693/94‑1 (MQ=60)

              AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG                                                                                 >  SRR4302540.9711376/1‑94 (MQ=60)

              AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG                                                                                 >  SRR4302540.7387699/1‑94 (MQ=60)

              AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG                                                                                 <  SRR4302540.3524592/94‑1 (MQ=60)

              AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG                                                                                 >  SRR4302540.4420656/1‑94 (MQ=60)

              AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG                                                                                 >  SRR4302540.7387701/1‑94 (MQ=60)

               GGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGT                                                                                >  SRR4302540.10010071/1‑94 (MQ=60)

               GGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGC                                                                                >  SRR4302540.5460961/1‑94 (MQ=60)

                GCTAAACGTGTTGTGATCAACAAAGACACCTCCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTC                                                                               <  SRR4302540.9513180/94‑1 (MQ=60)

                GCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTC                                                                               <  SRR4302540.4216847/94‑1 (MQ=60)

                GCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTC                                                                               >  SRR4302540.1122240/1‑94 (MQ=60)

                GCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTC                                                                               <  SRR4302540.7480236/94‑1 (MQ=60)

                 CTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCA                                                                              >  SRR4302540.3016574/1‑94 (MQ=60)

                 CTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCA                                                                              <  SRR4302540.1852838/94‑1 (MQ=60)

                  TAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAG                                                                             >  SRR4302540.2206135/1‑94 (MQ=60)

                  TAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAG                                                                             <  SRR4302540.9110703/94‑1 (MQ=60)

                  TAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAG                                                                             <  SRR4302540.5070684/94‑1 (MQ=60)

                      CGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGT                                                                         >  SRR4302540.7979847/1‑94 (MQ=60)

                      CGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGT                                                                         >  SRR4302540.3595363/1‑94 (MQ=60)

                       GTGTTTTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                        <  SRR4302540.9313455/94‑1 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                        >  SRR4302540.2560874/1‑94 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                        >  SRR4302540.566736/1‑94 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                        <  SRR4302540.5984316/94‑1 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                        >  SRR4302540.9624396/1‑94 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                        >  SRR4302540.1032697/1‑94 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                        <  SRR4302540.9748591/94‑1 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                        <  SRR4302540.8791247/94‑1 (MQ=60)

                        TGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATT                                                                       >  SRR4302540.3696211/1‑94 (MQ=60)

                         GTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGCAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCAGTCAGCAGATTG                                                                      >  SRR4302540.1405157/1‑94 (MQ=60)

                         GTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTG                                                                      >  SRR4302540.4781367/1‑94 (MQ=60)

                         GTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTG                                                                      >  SRR4302540.2637631/1‑94 (MQ=60)

                         GTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTG                                                                      >  SRR4302540.7142574/1‑94 (MQ=60)

                          TTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGA                                                                     >  SRR4302540.3028897/1‑94 (MQ=60)

                           TGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAG                                                                    >  SRR4302540.3643738/1‑94 (MQ=60)

                           TGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAA                                                                    <  SRR4302540.5847624/94‑1 (MQ=60)

                           TGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGGGAAGAAGCTGCAACCCAGGGCCGCGTTGCTCAGATCCGTCCGCAGATTGAA                                                                    >  SRR4302540.3049567/1‑94 (MQ=60)

                            GTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAG                                                                   >  SRR4302540.2332357/1‑94 (MQ=60)

                            GTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAA                                                                   >  SRR4302540.7916725/1‑94 (MQ=60)

                              GATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAA                                                                 <  SRR4302540.5833854/94‑1 (MQ=60)

                              GATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAA                                                                 <  SRR4302540.1407404/94‑1 (MQ=60)

                               ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG                                                                <  SRR4302540.326194/94‑1 (MQ=60)

                               ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG                                                                <  SRR4302540.3561349/94‑1 (MQ=60)

                               ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG                                                                >  SRR4302540.9698995/1‑94 (MQ=60)

                                TCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGC                                                               >  SRR4302540.964995/1‑94 (MQ=60)

                                 CAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCA                                                              >  SRR4302540.1668560/1‑94 (MQ=60)

                                  AACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAA                                                             <  SRR4302540.7977201/94‑1 (MQ=60)

                                   ACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAC                                                            >  SRR4302540.6864148/1‑94 (MQ=60)

                                    CAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACT                                                           >  SRR4302540.6385264/1‑94 (MQ=60)

                                     AAAGCCGCCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTT                                                          <  SRR4302540.828408/94‑1 (MQ=60)

                                     AAAGACACCCCCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTT                                                          <  SRR4302540.1171338/94‑1 (MQ=60)

                                     AAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTT                                                          <  SRR4302540.1171337/94‑1 (MQ=60)

                                      AAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTC                                                         >  SRR4302540.639713/1‑94 (MQ=60)

                                       AGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCT                                                        <  SRR4302540.766951/94‑1 (MQ=60)

                                       AGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCT                                                        <  SRR4302540.6099561/94‑1 (MQ=60)

                                       AGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCT                                                        <  SRR4302540.3254004/94‑1 (MQ=60)

                                       AGACACCACCACTATCATCGATGGCGTGGGCGAAGAAGCTGCAATCTATGGCCGCGTTGCTCAGATCCGTCAGCGGATTGAAGAAGCAACTTCT                                                        >  SRR4302540.9859201/1‑94 (MQ=60)

                                        GACACCCCCACTATCATCGAGGGCGTGATTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTG                                                       <  SRR4302540.1044315/94‑1 (MQ=60)

                                        GACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTG                                                       >  SRR4302540.3707264/1‑94 (MQ=60)

                                        GACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTG                                                       >  SRR4302540.1584323/1‑94 (MQ=60)

                                         ACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGA                                                      <  SRR4302540.2429915/94‑1 (MQ=60)

                                         ACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGA                                                      <  SRR4302540.6567973/94‑1 (MQ=60)

                                         ACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGA                                                      >  SRR4302540.9008674/1‑94 (MQ=60)

                                         ACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGA                                                      <  SRR4302540.6211648/94‑1 (MQ=60)

                                          CACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAC                                                     <  SRR4302540.1261176/94‑1 (MQ=60)

                                           AGCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACT                                                    <  SRR4302540.3249435/94‑1 (MQ=60)

                                           ACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACT                                                    >  SRR4302540.552148/1‑94 (MQ=60)

                                             CACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAC                                                  <  SRR4302540.1844159/94‑1 (MQ=60)

                                              ACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACG                                                 >  SRR4302540.8488970/1‑94 (MQ=60)

                                              ACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACG                                                 <  SRR4302540.4137674/94‑1 (MQ=60)

                                               CCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGA                                                >  SRR4302540.9480979/1‑94 (MQ=60)

                                               CCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGA                                                >  SRR4302540.6606897/1‑94 (MQ=60)

                                                CACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAC                                               >  SRR4302540.434920/1‑94 (MQ=60)

                                                CACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAC                                               >  SRR4302540.4740687/1‑94 (MQ=60)

                                                 ACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACC                                              <  SRR4302540.7663565/94‑1 (MQ=60)

                                                 ACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACC                                              <  SRR4302540.5895482/94‑1 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                             >  SRR4302540.5214579/1‑94 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                             >  SRR4302540.5519273/1‑94 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                             >  SRR4302540.1894223/1‑94 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                             >  SRR4302540.4658325/1‑94 (MQ=60)

                                                   TATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGT                                            <  SRR4302540.1624049/94‑1 (MQ=60)

                                                   TATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGT                                            <  SRR4302540.9662963/94‑1 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGCAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                           <  SRR4302540.9040668/94‑1 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                           <  SRR4302540.1275731/94‑1 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                           >  SRR4302540.2861401/1‑94 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                           <  SRR4302540.9292994/94‑1 (MQ=60)

                                                     TCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGA                                          >  SRR4302540.31246/1‑94 (MQ=60)

                                                      CATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAA                                         <  SRR4302540.2473290/94‑1 (MQ=60)

                                                      CATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAA                                         >  SRR4302540.2374670/1‑94 (MQ=60)

                                                       ATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAA                                        >  SRR4302540.668528/1‑94 (MQ=60)

                                                        TCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAA                                       <  SRR4302540.2229211/94‑1 (MQ=60)

                                                         CGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAA                                      <  SRR4302540.3444534/94‑1 (MQ=60)

                                                          GATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAC                                     >  SRR4302540.4819769/1‑94 (MQ=60)

                                                          GATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAC                                     <  SRR4302540.3718121/94‑1 (MQ=60)

                                                          GATGGCGTGGGTGAAGAAGATGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCATCTTCTGACTACGACCGTGAAAAAC                                     <  SRR4302540.9299492/94‑1 (MQ=60)

                                                           GTGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGCTCCGTAAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACT                                    <  SRR4302540.5667474/94‑1 (MQ=60)

                                                           ATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACT                                    <  SRR4302540.5667473/94‑1 (MQ=60)

                                                           ATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACT                                    >  SRR4302540.1937666/1‑94 (MQ=60)

                                                           ATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACT                                    >  SRR4302540.9656114/1‑94 (MQ=60)

                                                           ATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACT                                    <  SRR4302540.3565449/94‑1 (MQ=60)

                                                             GGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGC                                  >  SRR4302540.8116178/1‑94 (MQ=60)

                                                              GCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCA                                 >  SRR4302540.493244/1‑94 (MQ=60)

                                                               GGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG                                <  SRR4302540.2723740/94‑1 (MQ=60)

                                                               CGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG                                >  SRR4302540.2245369/1‑94 (MQ=60)

                                                               CGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG                                >  SRR4302540.2245370/1‑94 (MQ=60)

                                                               CGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG                                >  SRR4302540.7329428/1‑94 (MQ=60)

                                                                gtaggaggAGAAGCTGCAATCCAGGGCCGCCTTGCTCAGTTCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               <  SRR4302540.8457198/86‑1 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               >  SRR4302540.7974242/1‑94 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               >  SRR4302540.8110306/1‑94 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               <  SRR4302540.10037459/94‑1 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               <  SRR4302540.10037460/94‑1 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               >  SRR4302540.10074163/1‑94 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               >  SRR4302540.4378167/1‑94 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               >  SRR4302540.4500804/1‑94 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                               >  SRR4302540.1873176/1‑94 (MQ=60)

                                                                 TGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGA                              >  SRR4302540.8989794/1‑94 (MQ=60)

                                                                  GGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAA                             >  SRR4302540.9424576/1‑94 (MQ=60)

                                                                   GGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAC                            <  SRR4302540.630916/94‑1 (MQ=60)

                                                                   GGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAC                            <  SRR4302540.8030891/94‑1 (MQ=60)

                                                                   GGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAC                            >  SRR4302540.4916794/1‑94 (MQ=60)

                                                                    GTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACG                           >  SRR4302540.683624/1‑94 (MQ=60)

                                                                    GTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACG                           <  SRR4302540.1692067/94‑1 (MQ=60)

                                                                    GTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACG                           <  SRR4302540.7406479/94‑1 (MQ=60)

                                                                     gctagaagcggcaatgccGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGCCCGTGAAAAACTGCAGGAACGC                          <  SRR4302540.346998/76‑1 (MQ=60)

                                                                     TGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGC                          >  SRR4302540.3635612/1‑94 (MQ=60)

                                                                      GAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCG                         <  SRR4302540.4753284/94‑1 (MQ=60)

                                                                      GAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCG                         <  SRR4302540.232070/94‑1 (MQ=60)

                                                                      GAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCG                         >  SRR4302540.9238068/1‑94 (MQ=60)

                                                                      GAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCG                         >  SRR4302540.4326568/1‑94 (MQ=60)

                                                                       AAGAAGCTGCAATCCAGGTCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGT                        <  SRR4302540.8085966/94‑1 (MQ=60)

                                                                        AGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTA                       >  SRR4302540.9611027/1‑94 (MQ=60)

                                                                         GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG                      <  SRR4302540.6218501/94‑1 (MQ=60)

                                                                         GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG                      >  SRR4302540.308379/1‑94 (MQ=60)

                                                                           AGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCG                    >  SRR4302540.5999295/1‑94 (MQ=60)

                                                                            GCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGA                   >  SRR4302540.1245881/1‑94 (MQ=60)

                                                                             CTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAA                  >  SRR4302540.1680525/1‑94 (MQ=60)

                                                                             CTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAA                  >  SRR4302540.9939447/1‑94 (MQ=60)

                                                                              TGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAA                 >  SRR4302540.2384663/1‑94 (MQ=60)

                                                                                CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT               <  SRR4302540.1661026/94‑1 (MQ=60)

                                                                                CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT               >  SRR4302540.1700165/1‑94 (MQ=60)

                                                                                CAATCCAGGGCCGCGGTGCTCAGATCCGTCAGAAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAGCTGCAGGAACGCGTAGCGAAACT               <  SRR4302540.9674814/94‑1 (MQ=60)

                                                                                 CATCCAGGGACGCGTTGCTCAGATCCGTCAGCTGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAACCTG              <  SRR4302540.9044539/94‑1 (MQ=60)

                                                                                 AATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTG              <  SRR4302540.7584481/94‑1 (MQ=60)

                                                                                  ATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGG             <  SRR4302540.5990006/94‑1 (MQ=60)

                                                                                  ATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGG             >  SRR4302540.7727045/1‑94 (MQ=60)

                                                                                   TCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGTC            >  SRR4302540.9459216/1‑94 (MQ=60)

                                                                                   TCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGC            >  SRR4302540.860485/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA           >  SRR4302540.3906947/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA           <  SRR4302540.8061981/94‑1 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA           >  SRR4302540.4582716/1‑94 (MQ=60)

                                                                                     CAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAG          <  SRR4302540.7084439/94‑1 (MQ=60)

                                                                                     CAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAG          >  SRR4302540.6704322/1‑94 (MQ=60)

                                                                                     CAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAG          >  SRR4302540.10114377/1‑94 (MQ=60)

                                                                                     CAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAG          <  SRR4302540.298425/94‑1 (MQ=60)

                                                                                      AGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGG         >  SRR4302540.2043898/1‑94 (MQ=60)

                                                                                      AGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGG         >  SRR4302540.813394/1‑94 (MQ=60)

                                                                                      AGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGG         <  SRR4302540.2868499/94‑1 (MQ=60)

                                                                                      AGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGG         >  SRR4302540.2662547/1‑94 (MQ=60)

                                                                                       GGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGG        >  SRR4302540.5129787/1‑94 (MQ=60)

                                                                                       GGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGC        <  SRR4302540.6124323/94‑1 (MQ=60)

                                                                                       GGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGC        <  SRR4302540.3363429/94‑1 (MQ=60)

                                                                                        GGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCG       <  SRR4302540.4407803/94‑1 (MQ=60)

                                                                                        GGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCG       <  SRR4302540.1875325/94‑1 (MQ=60)

                                                                                        GGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCG       <  SRR4302540.9039688/94‑1 (MQ=60)

                                                                                        GGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCG       <  SRR4302540.2042918/94‑1 (MQ=60)

                                                                                         GCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG      <  SRR4302540.2524335/94‑1 (MQ=60)

                                                                                           CGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCG    <  SRR4302540.3508842/94‑1 (MQ=60)

                                                                                            GCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGT   >  SRR4302540.1570429/1‑94 (MQ=60)

                                                                                            GCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGT   >  SRR4302540.1395003/1‑94 (MQ=60)

                                                                                             CGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTT  >  SRR4302540.6503806/1‑94 (MQ=60)

                                                                                             CGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTT  <  SRR4302540.383032/94‑1 (MQ=60)

GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTT  >  NC_000913/4369544‑4369730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`