Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,368,258 |
A→G |
intergenic (‑268/‑8) |
yjeH ← / → mopB |
putative transport/GroES |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,368,258 | 0 | A | G | 99.6%
| 865.3
/ NA
| 267 | intergenic (‑268/‑8) | yjeH/mopB | putative transport/GroES |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (117/149); total (117/150) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 277 total aligned reads displayed.
GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA > NC_000913/4368168‑4368347
|
aaGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGtt > 2:4816996/1‑93 (MQ=255)
aGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTa < 2:3710340/93‑1 (MQ=255)
gCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAt > 1:5170555/1‑93 (MQ=255)
ccTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATc < 2:3398714/93‑1 (MQ=255)
tCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCaa > 1:2834154/1‑93 (MQ=255)
aTCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATg < 2:166003/93‑1 (MQ=255)
tCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGa < 2:2891210/93‑1 (MQ=255)
tCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGa > 2:4660808/1‑93 (MQ=255)
ccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAata < 1:5601246/93‑1 (MQ=255)
cATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAatat < 2:6032698/93‑1 (MQ=255)
cATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAatat < 1:1874397/93‑1 (MQ=255)
aTTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAtt < 2:1942803/93‑1 (MQ=255)
tttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTc > 2:3200539/1‑93 (MQ=255)
ttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCg < 2:625406/93‑1 (MQ=255)
tctcTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGt > 1:1686207/1‑93 (MQ=255)
tcgctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGAGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGt < 1:684457/90‑1 (MQ=255)
tctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTcc < 2:2647001/93‑1 (MQ=255)
ctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCa < 1:1378880/93‑1 (MQ=255)
tGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAt > 2:2661149/1‑93 (MQ=255)
tGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAt < 2:4688219/93‑1 (MQ=255)
ggTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAtt > 1:5738028/1‑93 (MQ=255)
ggTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAtt < 1:5494071/93‑1 (MQ=255)
ggTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAtt < 1:1770455/93‑1 (MQ=255)
gTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTg > 2:2101461/1‑93 (MQ=255)
tCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGc > 1:3104331/1‑93 (MQ=255)
cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCa < 2:5968488/93‑1 (MQ=255)
aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt < 1:3742564/93‑1 (MQ=255)
aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt < 2:6191415/93‑1 (MQ=255)
aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt < 1:264819/93‑1 (MQ=255)
aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt < 1:1659406/93‑1 (MQ=255)
ccGGTAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcg < 1:2503287/93‑1 (MQ=255)
ccGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcg < 2:2940612/93‑1 (MQ=255)
ccGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcc < 2:218525/93‑2 (MQ=255)
gggAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcgcg > 1:6169760/1‑93 (MQ=255)
ggAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGt > 1:1334226/1‑93 (MQ=255)
aaaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTgt > 1:1539782/1‑92 (MQ=255)
aaaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGa < 2:4065135/93‑1 (MQ=255)
aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt > 1:1088306/1‑93 (MQ=255)
aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt < 1:527562/93‑1 (MQ=255)
aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt < 1:4160192/93‑1 (MQ=255)
ccACGTAAGCTCCGGCGTCACCCATAACAGATTCGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCg < 2:5777806/93‑1 (MQ=255)
ccACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCg < 1:4043195/93‑1 (MQ=255)
aCGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTc > 1:4598397/1‑93 (MQ=255)
aCGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTc > 2:4961753/1‑93 (MQ=255)
cGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCa < 2:452564/93‑1 (MQ=255)
cGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCa < 1:1264247/93‑1 (MQ=255)
gTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCaa < 1:5968135/93‑1 (MQ=255)
gTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCaa < 1:2398641/93‑1 (MQ=255)
tAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAg > 2:5577751/1‑93 (MQ=255)
aGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCg < 1:228591/93‑1 (MQ=255)
aGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCg > 1:1989831/1‑93 (MQ=255)
tCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaa > 1:5292497/1‑93 (MQ=255)
tCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaa > 1:2728371/1‑93 (MQ=255)
ccGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaaa < 1:4479864/93‑1 (MQ=255)
ccGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaaa < 2:5648279/93‑1 (MQ=255)
gtcGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaaga < 2:74901/91‑1 (MQ=255)
cGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaag < 1:1242808/93‑1 (MQ=255)
tCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGtt < 2:1342705/93‑1 (MQ=255)
aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGa > 2:3355700/1‑93 (MQ=255)
aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGa > 2:5405180/1‑93 (MQ=255)
ccATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGaaa < 2:328313/93‑1 (MQ=255)
cATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAc < 1:3942417/93‑1 (MQ=255)
aTAACAGATACGGACTTTCGCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACt < 2:4280672/93‑1 (MQ=255)
aaCAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTaa > 2:275138/1‑93 (MQ=255)
aaCAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTaa < 1:5566407/93‑1 (MQ=255)
aaCAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTaa > 1:6019146/1‑93 (MQ=255)
aCAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTaaa > 2:2495800/1‑93 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc < 1:6256175/93‑1 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc < 1:4741760/93‑1 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc < 2:56261/93‑1 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc < 1:3347775/93‑1 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc > 2:361373/1‑93 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc < 1:3016734/93‑1 (MQ=255)
gATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATct < 1:3800209/93‑1 (MQ=255)
gATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATct < 2:3526403/93‑1 (MQ=255)
tACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc < 2:5179589/93‑1 (MQ=255)
aCGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgct > 2:879068/1‑93 (MQ=255)
aCGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgct > 1:4805325/1‑93 (MQ=255)
aCGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgct < 1:5769756/93‑1 (MQ=255)
cGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgctg < 1:759042/93‑1 (MQ=255)
cGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgctg < 2:2569315/93‑1 (MQ=255)
gACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggg > 1:4620759/1‑92 (MQ=255)
gACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggc < 1:1592373/93‑1 (MQ=255)
tttCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggcggc > 1:4935614/1‑93 (MQ=255)
tctcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAt > 1:6146735/1‑93 (MQ=255)
ctcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATc > 1:3566214/1‑93 (MQ=255)
ctcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATc > 2:5260063/1‑93 (MQ=255)
cAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGt > 2:1463915/1‑93 (MQ=255)
cAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGt < 2:2242918/93‑1 (MQ=255)
aaaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGtt > 2:4416490/1‑93 (MQ=255)
aaaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGtt < 2:1008243/93‑1 (MQ=255)
aaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTc < 1:2172813/93‑1 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt > 1:436439/1‑93 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt > 1:4639827/1‑93 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt < 2:3116857/93‑1 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt > 2:1097437/1‑93 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt < 1:5791262/93‑1 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCCTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt > 2:5533336/1‑93 (MQ=255)
ggAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTg > 2:2394637/1‑93 (MQ=255)
ggAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTg > 2:1864947/1‑93 (MQ=255)
|
GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA > NC_000913/4368168‑4368347
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG > NC_000913/4368165‑4368351
|
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG > SRR4302533.668425/1‑94 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG < SRR4302533.3973717/94‑1 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG < SRR4302533.2725885/94‑1 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCAGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG < SRR4302533.4707501/94‑1 (MQ=60)
GCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGG < SRR4302533.3947914/94‑1 (MQ=60)
CGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT < SRR4302533.3291925/94‑1 (MQ=60)
AGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAT < SRR4302533.174812/94‑1 (MQ=60)
AGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAT > SRR4302533.5201759/1‑94 (MQ=60)
CCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCA < SRR4302533.1554175/94‑1 (MQ=60)
CCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCA < SRR4302533.2088704/94‑1 (MQ=60)
CCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCA > SRR4302533.805675/1‑94 (MQ=60)
CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA > SRR4302533.2851601/1‑94 (MQ=60)
CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA > SRR4302533.1303229/1‑94 (MQ=60)
TCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAT > SRR4302533.482284/1‑94 (MQ=60)
CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG < SRR4302533.6209711/94‑1 (MQ=60)
ATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGA < SRR4302533.2515248/94‑1 (MQ=60)
TCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAA < SRR4302533.1690814/94‑1 (MQ=60)
TCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAA > SRR4302533.3786276/1‑94 (MQ=60)
ACCCCATTTCTCTGGTCACCAGCCGGGAAGCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAA < SRR4302533.1470639/94‑1 (MQ=60)
CCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAAT > SRR4302533.5011368/1‑94 (MQ=60)
CCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATA < SRR4302533.4594880/94‑1 (MQ=60)
CCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATA < SRR4302533.5237202/94‑1 (MQ=60)
CCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAT < SRR4302533.3977043/94‑1 (MQ=60)
CCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAT < SRR4302533.5635094/94‑1 (MQ=60)
CATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATT < SRR4302533.1885819/94‑1 (MQ=60)
ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC < SRR4302533.4627381/94‑1 (MQ=60)
TTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCG < SRR4302533.1632330/94‑1 (MQ=60)
TTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGT > SRR4302533.3263378/1‑94 (MQ=60)
TTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGT > SRR4302533.1696421/1‑94 (MQ=60)
TCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTC > SRR4302533.761767/1‑94 (MQ=60)
TCGCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGAGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTC < SRR4302533.688505/94‑1 (MQ=60)
CTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCC > SRR4302533.1562071/1‑94 (MQ=60)
CTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCC > SRR4302533.5211346/1‑94 (MQ=60)
TCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCA < SRR4302533.1143100/94‑1 (MQ=60)
CTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAT < SRR4302533.1387176/94‑1 (MQ=60)
CTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAT < SRR4302533.6035940/94‑1 (MQ=60)
CTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAT < SRR4302533.6199282/94‑1 (MQ=60)
CTGCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAT < SRR4302533.5632171/94‑1 (MQ=60)
TGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATT > SRR4302533.5772659/1‑94 (MQ=60)
TGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATT > SRR4302533.4652280/1‑94 (MQ=60)
GGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTG < SRR4302533.5527215/94‑1 (MQ=60)
GGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTG < SRR4302533.1781235/94‑1 (MQ=60)
tgccccagcctgcaaacccctTAAGCTCCGGCGCCCCCCATAACAGATACGGGCTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGC < SRR4302533.5884381/73‑1 (MQ=60)
GTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGC > SRR4302533.3123415/1‑94 (MQ=60)
TCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCA > SRR4302533.5664074/1‑94 (MQ=60)
CCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGA < SRR4302533.5899994/94‑1 (MQ=60)
CCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGA < SRR4302533.1817846/94‑1 (MQ=60)
CAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAT < SRR4302533.4659986/94‑1 (MQ=60)
AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC < SRR4302533.3765519/94‑1 (MQ=60)
AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC < SRR4302533.266430/94‑1 (MQ=60)
AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC < SRR4302533.1669442/94‑1 (MQ=60)
CCGGTAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGC < SRR4302533.2518721/94‑1 (MQ=60)
CCGGGAAACCACGTAAGCTCCGGCCTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGC < SRR4302533.5728368/94‑1 (MQ=60)
CGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCG > SRR4302533.6206844/1‑94 (MQ=60)
GGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGT < SRR4302533.4615895/94‑1 (MQ=60)
GGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGT > SRR4302533.1342232/1‑94 (MQ=60)
GGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGT < SRR4302533.4791916/94‑1 (MQ=60)
GGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGT < SRR4302533.20895/94‑1 (MQ=60)
GAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGT > SRR4302533.1549055/1‑94 (MQ=60)
GAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGA > SRR4302533.5405736/1‑94 (MQ=60)
GAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGGTATCAATGAATATTCGTCCATTGCATGATCGCGTGA > SRR4302533.945273/1‑94 (MQ=60)
AAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAT > SRR4302533.1094716/1‑94 (MQ=60)
AAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAT < SRR4302533.4407161/94‑1 (MQ=60)
AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC < SRR4302533.530697/94‑1 (MQ=60)
AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC < SRR4302533.4185406/94‑1 (MQ=60)
ACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCG > SRR4302533.4030858/1‑94 (MQ=60)
CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT > SRR4302533.728717/1‑94 (MQ=60)
CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT < SRR4302533.4067805/94‑1 (MQ=60)
CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT < SRR4302533.3847917/94‑1 (MQ=60)
CACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTC > SRR4302533.4626257/1‑94 (MQ=60)
CGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAA < SRR4302533.1271813/94‑1 (MQ=60)
GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG < SRR4302533.2413449/94‑1 (MQ=60)
GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG < SRR4302533.6004264/94‑1 (MQ=60)
GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG > SRR4302533.2256475/1‑94 (MQ=60)
TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC < SRR4302533.6216517/94‑1 (MQ=60)
AAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCG > SRR4302533.2002012/1‑94 (MQ=60)
AGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGT < SRR4302533.230010/94‑1 (MQ=60)
AGCTCCGGCGTCACCCATAACAGATACGGACTATCTCAAAGGAGGGAGATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGA > SRR4302533.6346333/1‑94 (MQ=60)
CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAA > SRR4302533.2745108/1‑94 (MQ=60)
CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAA < SRR4302533.5416359/94‑1 (MQ=60)
CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAA > SRR4302533.5324179/1‑94 (MQ=60)
CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAA > SRR4302533.1272496/1‑94 (MQ=60)
TCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAA < SRR4302533.2214123/94‑1 (MQ=60)
TCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAA < SRR4302533.3762982/94‑1 (MQ=60)
CCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAG < SRR4302533.4506965/94‑1 (MQ=60)
GGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAA < SRR4302533.2595258/94‑1 (MQ=60)
GGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAA < SRR4302533.4671597/94‑1 (MQ=60)
GGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAA < SRR4302533.3558663/94‑1 (MQ=60)
GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG > SRR4302533.6066673/1‑94 (MQ=60)
CGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGT < SRR4302533.1250229/94‑1 (MQ=60)
CGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGT < SRR4302533.493213/94‑1 (MQ=60)
GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT > SRR4302533.4119668/1‑94 (MQ=60)
TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG > SRR4302533.1937349/1‑94 (MQ=60)
ACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAA < SRR4302533.1874751/94‑1 (MQ=60)
CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC < SRR4302533.308970/94‑1 (MQ=60)
CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC > SRR4302533.6039168/1‑94 (MQ=60)
CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC < SRR4302533.2670802/94‑1 (MQ=60)
CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC < SRR4302533.1383073/94‑1 (MQ=60)
CATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACT < SRR4302533.1354326/94‑1 (MQ=60)
CATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACT < SRR4302533.3966472/94‑1 (MQ=60)
ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA > SRR4302533.4764882/1‑94 (MQ=60)
ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA > SRR4302533.2463835/1‑94 (MQ=60)
TAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAA > SRR4302533.6055620/1‑94 (MQ=60)
AACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAA < SRR4302533.5600053/94‑1 (MQ=60)
AACAGATACGGACTGTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAA < SRR4302533.3710615/94‑1 (MQ=60)
ACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAT > SRR4302533.5566195/1‑94 (MQ=60)
ACAGAGACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAT < SRR4302533.3880033/94‑1 (MQ=60)
CAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATC > SRR4302533.5793550/1‑94 (MQ=60)
AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT < SRR4302533.3368459/94‑1 (MQ=60)
AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT < SRR4302533.6293586/94‑1 (MQ=60)
AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT < SRR4302533.3035186/94‑1 (MQ=60)
AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT < SRR4302533.4770507/94‑1 (MQ=60)
AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT > SRR4302533.516373/1‑94 (MQ=60)
GATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTG < SRR4302533.3823469/94‑1 (MQ=60)
GATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTG > SRR4302533.4217741/1‑94 (MQ=60)
GATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTG < SRR4302533.4406064/94‑1 (MQ=60)
GATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTG < SRR4302533.2658920/94‑1 (MQ=60)
TGCGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT < SRR4302533.2681145/94‑1 (MQ=60)
TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT > SRR4302533.4834422/1‑94 (MQ=60)
ACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTG < SRR4302533.5804591/94‑1 (MQ=60)
ACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTG > SRR4302533.5800495/1‑94 (MQ=60)
CGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG < SRR4302533.763510/94‑1 (MQ=60)
CGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG < SRR4302533.5993432/94‑1 (MQ=60)
GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGG > SRR4302533.4648765/1‑94 (MQ=60)
GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGC > SRR4302533.1682697/1‑94 (MQ=60)
GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGC > SRR4302533.6075431/1‑94 (MQ=60)
GACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCG > SRR4302533.1972337/1‑94 (MQ=60)
GACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCG > SRR4302533.1642242/1‑94 (MQ=60)
GACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCG < SRR4302533.1602004/94‑1 (MQ=60)
ACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGG > SRR4302533.3164143/1‑94 (MQ=60)
CTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGC > SRR4302533.4965501/1‑94 (MQ=60)
CTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGC < SRR4302533.2974348/94‑1 (MQ=60)
CTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGC > SRR4302533.531483/1‑94 (MQ=60)
TTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCA < SRR4302533.2926290/94‑1 (MQ=60)
TTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCA < SRR4302533.5817368/94‑1 (MQ=60)
TTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAT < SRR4302533.3788682/94‑1 (MQ=60)
TTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAT > SRR4302533.6183740/1‑94 (MQ=60)
TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC > SRR4302533.3588192/1‑94 (MQ=60)
TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC < SRR4302533.1263838/94‑1 (MQ=60)
CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCG > SRR4302533.2367134/1‑94 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT < SRR4302533.3048270/94‑1 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT > SRR4302533.439037/1‑94 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT < SRR4302533.4376538/94‑1 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT < SRR4302533.2186173/94‑1 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT < SRR4302533.125612/94‑1 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT > SRR4302533.4667939/1‑94 (MQ=60)
AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG < SRR4302533.5826250/94‑1 (MQ=60)
AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG < SRR4302533.5622046/94‑1 (MQ=60)
AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG > SRR4302533.5316610/1‑94 (MQ=60)
AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGGAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTGTG > SRR4302533.28147/1‑94 (MQ=60)
GAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGAC < SRR4302533.647257/94‑1 (MQ=60)
GAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGAC > SRR4302533.2844320/1‑94 (MQ=60)
AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC > SRR4302533.4291785/1‑94 (MQ=60)
AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC > SRR4302533.6029027/1‑94 (MQ=60)
AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC > SRR4302533.5989463/1‑94 (MQ=60)
AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC > SRR4302533.2861321/1‑94 (MQ=60)
AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC < SRR4302533.5040740/94‑1 (MQ=60)
GGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG < SRR4302533.3099121/94‑1 (MQ=60)
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GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG > NC_000913/4368165‑4368351
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
