Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,408,560	G→A	A144T (GCC→ACC)	yjfJ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,408,560	0	G	A	99.6%	1686.7 / NA	484	A144T (GCC→ACC)	yjfJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (206/273); total (208/276)
Fisher's exact test for biased strand distribution p-value = 5.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 496 total aligned reads displayed.

CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA  >  NC_000913/4408470‑4408649

cTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAAcc                                                                                         <  2:3614832/93‑1 (MQ=255)

 tGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCa                                                                                        <  2:98749/93‑1 (MQ=255)

 tGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCa                                                                                        <  2:62592/93‑1 (MQ=255)

  ggAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCAc                                                                                       <  1:9295222/93‑1 (MQ=255)

   gAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACt                                                                                      >  1:3406105/1‑93 (MQ=255)

    aaGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTg                                                                                     <  2:1843660/93‑1 (MQ=255)

    aaGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTg                                                                                     >  1:588460/1‑93 (MQ=255)

     aGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGa                                                                                    >  1:363672/1‑93 (MQ=255)

     aGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGa                                                                                    <  1:3872041/93‑1 (MQ=255)

      gTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGaa                                                                                   <  1:1920924/93‑1 (MQ=255)

      gTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGaa                                                                                   <  1:794100/93‑1 (MQ=255)

       tctcCCGTGATGGCGTTTAAAAAGCTGTTACAGCGACTGCGCAGCGTATCGCTCAGGTTGAGCAGCTAATGGAAGTCGTTAAAACCACTGAAg                                                                                  >  2:8974501/1‑93 (MQ=255)

       tctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAg                                                                                  <  2:9329645/93‑1 (MQ=255)

        ctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGc                                                                                 >  1:5926401/1‑93 (MQ=255)

         tcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGcc                                                                                >  2:3074710/1‑93 (MQ=255)

         tcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGcc                                                                                >  2:2124200/1‑93 (MQ=255)

          cccGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCa                                                                               <  1:7713466/93‑1 (MQ=255)

           ccGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAt                                                                              <  2:4737568/93‑1 (MQ=255)

             gTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGc                                                                            >  1:9238894/1‑93 (MQ=255)

             gTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGc                                                                            <  2:1022532/93‑1 (MQ=255)

             gTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGc                                                                            >  1:5715176/1‑93 (MQ=255)

             gTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGc                                                                            <  1:2473938/93‑1 (MQ=255)

              tGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCa                                                                           <  1:7774630/93‑1 (MQ=255)

              tGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCa                                                                           >  1:2094346/1‑93 (MQ=255)

               gATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAg                                                                          <  1:9085538/93‑1 (MQ=255)

                aTGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGc                                                                         >  1:1224942/1‑93 (MQ=255)

                aTGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGc                                                                         >  1:6311358/1‑93 (MQ=255)

                 tGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCg                                                                        >  1:851111/1‑93 (MQ=255)

                 tGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCg                                                                        >  2:2838001/1‑93 (MQ=255)

                   gCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTg                                                                      >  2:3401333/1‑93 (MQ=255)

                    cGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGc                                                                     <  1:4096071/93‑1 (MQ=255)

                    cGTGGAAAAAACAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGGGc                                                                     >  2:7645017/1‑93 (MQ=255)

                     gTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGca                                                                    <  1:224504/93‑1 (MQ=255)

                      tGGAAAAAGCAGTTACAGCGACATCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGcac                                                                   <  2:5530341/93‑1 (MQ=255)

                      tGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGTAGACATGCAGCGTGcac                                                                   >  2:3819443/1‑93 (MQ=255)

                      tGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGcac                                                                   <  1:2350167/93‑1 (MQ=255)

                      tGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGcac                                                                   >  1:3230538/1‑93 (MQ=255)

                      tGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGcac                                                                   <  1:5231721/93‑1 (MQ=255)

                        gAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaa                                                                 >  2:3864605/1‑93 (MQ=255)

                        gAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaa                                                                 <  1:4220951/93‑1 (MQ=255)

                          aaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaaca                                                               <  1:3074564/93‑1 (MQ=255)

                          aaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaaca                                                               <  2:2200683/93‑1 (MQ=255)

                                  ttACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaa                                                       <  2:8919481/93‑1 (MQ=255)

                                  ttACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaa                                                       <  2:1639111/93‑1 (MQ=255)

                                   tACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaac                                                      <  2:8176993/93‑1 (MQ=255)

                                    acagcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaaca                                                     >  1:6921303/1‑93 (MQ=255)

                                     cagcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaacaa                                                    <  2:3249821/93‑1 (MQ=255)

                                     cagcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaacaa                                                    <  1:8834481/93‑1 (MQ=255)

                                      agcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaacaac                                                   <  1:108346/93‑1 (MQ=255)

                                      agcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaacaac                                                   <  1:7047471/93‑1 (MQ=255)

                                      agcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaacaac                                                   <  2:5201151/93‑1 (MQ=255)

                                        cgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACct                                                 >  1:9685270/1‑93 (MQ=255)

                                        cgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACct                                                 <  2:1407567/93‑1 (MQ=255)

                                         gacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctc                                                <  2:4481492/93‑1 (MQ=255)

                                         gacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctc                                                <  2:1959743/93‑1 (MQ=255)

                                         gacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctc                                                <  1:2935158/93‑1 (MQ=255)

                                          acagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctct                                               >  2:132495/1‑93 (MQ=255)

                                          acagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctct                                               >  1:660258/1‑93 (MQ=255)

                                            agcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAc                                             <  1:8263344/93‑1 (MQ=255)

                                             gcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAcc                                            <  2:8570173/93‑1 (MQ=255)

                                             gcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAcc                                            <  2:2689866/93‑1 (MQ=255)

                                             gcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAcc                                            >  1:675356/1‑93 (MQ=255)

                                               gcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGt                                          >  2:6461028/1‑93 (MQ=255)

                                                 agcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTg                                        >  1:8863512/1‑93 (MQ=255)

                                                 agcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTg                                        <  2:4799705/93‑1 (MQ=255)

                                                  gcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTgg                                       >  1:6491561/1‑93 (MQ=255)

                                                      aTCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCa                                   >  2:7893596/1‑93 (MQ=255)

                                                        cGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATc                                 <  2:7300992/93‑1 (MQ=255)

                                                        cGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATc                                 >  2:6951122/1‑93 (MQ=255)

                                                        cGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATc                                 <  1:6207098/93‑1 (MQ=255)

                                                         gCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCt                                <  1:4406588/93‑1 (MQ=255)

                                                          cTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCtt                               >  2:4248695/1‑93 (MQ=255)

                                                          cTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCtt                               >  2:6833743/1‑93 (MQ=255)

                                                          cTCAGTTTGAGCAGCAAAGGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAACTCTACCGTTGGCGCATCtt                               <  2:6622298/93‑1 (MQ=255)

                                                           tCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTc                              >  1:8713100/1‑93 (MQ=255)

                                                            cAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCATTGAAGCCATGCAGCGGGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTcc                             <  1:2611067/93‑1 (MQ=255)

                                                            cAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTcc                             <  1:1573063/93‑1 (MQ=255)

                                                              gTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAg                           >  1:2709921/1‑93 (MQ=255)

                                                                 tGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACACCCTCTACCGTTGGCGCATCTTCCAGCGt                        <  2:4100491/93‑1 (MQ=255)

                                                                 tGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGt                        <  2:1188715/93‑1 (MQ=255)

                                                                 tGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGt                        >  2:6026087/1‑93 (MQ=255)

                                                                  gAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGtt                       >  2:9715065/1‑93 (MQ=255)

                                                                   agcagcAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGttt                      <  1:485381/93‑1 (MQ=255)

                                                                    gcagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTc                     <  1:6423384/93‑1 (MQ=255)

                                                                     cagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCg                    >  2:498670/1‑93 (MQ=255)

                                                                     cagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCg                    <  1:7460470/93‑1 (MQ=255)

                                                                      agcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGa                   <  1:1462939/93‑1 (MQ=255)

                                                                       gcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAc                  <  2:7576339/93‑1 (MQ=255)

                                                                        caAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACa                 >  1:7345393/1‑93 (MQ=255)

                                                                         aaaTGGAAGTCGTTAAAACCGCTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg                <  2:3972789/93‑1 (MQ=255)

                                                                         aaaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg                <  1:9489494/93‑1 (MQ=255)

                                                                         aaaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg                >  2:5050383/1‑93 (MQ=255)

                                                                         aaaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg                <  1:4663390/93‑1 (MQ=255)

                                                                          aaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGc               >  1:3574069/1‑93 (MQ=255)

                                                                          aaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGc               <  1:5025371/93‑1 (MQ=255)

                                                                              gAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCa           <  1:10019415/93‑1 (MQ=255)

                                                                              gAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCa           <  1:1693744/93‑1 (MQ=255)

                                                                               aaGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAg          >  1:815734/1‑93 (MQ=255)

                                                                                aGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGa         <  2:9105967/93‑1 (MQ=255)

                                                                                     ttAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATTCt    >  2:6119797/1‑93 (MQ=255)

CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA  >  NC_000913/4408470‑4408649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 289 total aligned reads displayed.

AATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  >  NC_000913/4408467‑4408653

AATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAA                                                                                               <  SRR4302540.270793/94‑1 (MQ=60)

AATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAA                                                                                               <  SRR4302540.5923793/94‑1 (MQ=60)

 ATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAAC                                                                                              <  SRR4302540.2379039/94‑1 (MQ=60)

 ATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAAC                                                                                              >  SRR4302540.6816288/1‑94 (MQ=60)

 ATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAAC                                                                                              >  SRR4302540.6543192/1‑94 (MQ=60)

 ATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAAC                                                                                              >  SRR4302540.649202/1‑94 (MQ=60)

 ATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAAC                                                                                              >  SRR4302540.3996981/1‑94 (MQ=60)

  TCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACC                                                                                             <  SRR4302540.4284107/94‑1 (MQ=60)

   CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAACCCA                                                                                            >  SRR4302540.4259956/1‑94 (MQ=60)

    TGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGGTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGGCGTTAAAACCAC                                                                                           >  SRR4302540.7012086/1‑94 (MQ=60)

     GGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACT                                                                                          >  SRR4302540.3443220/1‑94 (MQ=60)

     GGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACT                                                                                          <  SRR4302540.9406275/94‑1 (MQ=60)

      GAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTG                                                                                         <  SRR4302540.1285962/94‑1 (MQ=60)

      GAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTG                                                                                         <  SRR4302540.3619020/94‑1 (MQ=60)

       AAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGA                                                                                        >  SRR4302540.367414/1‑94 (MQ=60)

       AAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGA                                                                                        >  SRR4302540.3183663/1‑94 (MQ=60)

        AGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAA                                                                                       <  SRR4302540.501401/94‑1 (MQ=60)

        AGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAA                                                                                       <  SRR4302540.3914133/94‑1 (MQ=60)

        AGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAA                                                                                       >  SRR4302540.9233708/1‑94 (MQ=60)

        AGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAA                                                                                       <  SRR4302540.2594356/94‑1 (MQ=60)

         GTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAG                                                                                      >  SRR4302540.8415766/1‑94 (MQ=60)

         GTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAG                                                                                      <  SRR4302540.2459653/94‑1 (MQ=60)

         GTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAG                                                                                      <  SRR4302540.802533/94‑1 (MQ=60)

         GTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAG                                                                                      <  SRR4302540.1941876/94‑1 (MQ=60)

          TCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGC                                                                                     >  SRR4302540.5991882/1‑94 (MQ=60)

          TCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGC                                                                                     <  SRR4302540.9355445/94‑1 (MQ=60)

          TCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGC                                                                                     >  SRR4302540.2230421/1‑94 (MQ=60)

           CTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCC                                                                                    >  SRR4302540.4085824/1‑94 (MQ=60)

            TCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCA                                                                                   >  SRR4302540.1737500/1‑94 (MQ=60)

            TCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCA                                                                                   <  SRR4302540.8945907/94‑1 (MQ=60)

            TCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCA                                                                                   <  SRR4302540.8945908/94‑1 (MQ=60)

             CCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAT                                                                                  <  SRR4302540.7376739/94‑1 (MQ=60)

             CCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAT                                                                                  <  SRR4302540.4734013/94‑1 (MQ=60)

              CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATG                                                                                 <  SRR4302540.473920/94‑1 (MQ=60)

              CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACAACTGAAGCCATG                                                                                 >  SRR4302540.1474725/1‑94 (MQ=60)

               CGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGC                                                                                <  SRR4302540.6956938/94‑1 (MQ=60)

               CGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGC                                                                                >  SRR4302540.5778085/1‑94 (MQ=60)

               CGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGC                                                                                <  SRR4302540.3795046/94‑1 (MQ=60)

               CGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGC                                                                                >  SRR4302540.9349570/1‑94 (MQ=60)

                GTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCA                                                                               <  SRR4302540.1609887/94‑1 (MQ=60)

                 TGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAG                                                                              <  SRR4302540.7865515/94‑1 (MQ=60)

                 TGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAG                                                                              <  SRR4302540.10039498/94‑1 (MQ=60)

                 TGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAG                                                                              >  SRR4302540.4391412/1‑94 (MQ=60)

                 TGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAG                                                                              >  SRR4302540.5081370/1‑94 (MQ=60)

                  GATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGC                                                                             >  SRR4302540.5402925/1‑94 (MQ=60)

                  GATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGC                                                                             >  SRR4302540.6381634/1‑94 (MQ=60)

                   ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG                                                                            >  SRR4302540.8642425/1‑94 (MQ=60)

                   ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG                                                                            >  SRR4302540.860146/1‑94 (MQ=60)

                   ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG                                                                            <  SRR4302540.6626721/94‑1 (MQ=60)

                   ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG                                                                            >  SRR4302540.9178068/1‑94 (MQ=60)

                   ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG                                                                            <  SRR4302540.5883557/94‑1 (MQ=60)

                   ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG                                                                            >  SRR4302540.695934/1‑94 (MQ=60)

                     GGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTG                                                                          >  SRR4302540.5850799/1‑94 (MQ=60)

                       CGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCA                                                                        <  SRR4302540.4140259/94‑1 (MQ=60)

                       CGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCA                                                                        >  SRR4302540.3211761/1‑94 (MQ=60)

                       CGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCA                                                                        >  SRR4302540.3426544/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       >  SRR4302540.1166443/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       >  SRR4302540.1736215/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       >  SRR4302540.7951950/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       >  SRR4302540.1539348/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       >  SRR4302540.3265669/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       <  SRR4302540.226676/94‑1 (MQ=60)

                         TGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACA                                                                      <  SRR4302540.2375474/94‑1 (MQ=60)

                         TGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACA                                                                      <  SRR4302540.5288774/94‑1 (MQ=60)

                          GGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAA                                                                     <  SRR4302540.2098082/94‑1 (MQ=60)

                           GAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAAC                                                                    <  SRR4302540.7833748/94‑1 (MQ=60)

                            AAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACA                                                                   >  SRR4302540.3786092/1‑94 (MQ=60)

                            AAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACA                                                                   <  SRR4302540.6374771/94‑1 (MQ=60)

                             AAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAG                                                                  <  SRR4302540.287049/94‑1 (MQ=60)

                             AAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAG                                                                  >  SRR4302540.4531610/1‑94 (MQ=60)

                             AAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAG                                                                  <  SRR4302540.3108289/94‑1 (MQ=60)

                             AAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAG                                                                  <  SRR4302540.7778156/94‑1 (MQ=60)

                             AAAAGCAGTAACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAG                                                                  <  SRR4302540.7778157/94‑1 (MQ=60)

                              AAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGG                                                                 <  SRR4302540.7153997/94‑1 (MQ=60)

                               AAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGC                                                                <  SRR4302540.3028798/94‑1 (MQ=60)

                                AGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCT                                                               <  SRR4302540.4215181/94‑1 (MQ=60)

                                AGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCT                                                               <  SRR4302540.973002/94‑1 (MQ=60)

                                  CAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGT                                                             <  SRR4302540.1079420/94‑1 (MQ=60)

                                    GTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAA                                                           >  SRR4302540.7361823/1‑94 (MQ=60)

                                    GTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAA                                                           >  SRR4302540.782501/1‑94 (MQ=60)

                                      TACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACA                                                         <  SRR4302540.9545893/94‑1 (MQ=60)

                                      TACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACA                                                         >  SRR4302540.6998319/1‑94 (MQ=60)

                                      TACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACA                                                         <  SRR4302540.4766076/94‑1 (MQ=60)

                                      TACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACA                                                         <  SRR4302540.6749876/94‑1 (MQ=60)

                                      TACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACA                                                         >  SRR4302540.4096452/1‑94 (MQ=60)

                                        CAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC                                                       <  SRR4302540.8936660/94‑1 (MQ=60)

                                        CAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC                                                       <  SRR4302540.7467174/94‑1 (MQ=60)

                                        CAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCACCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC                                                       >  SRR4302540.3590352/1‑94 (MQ=60)

                                         AGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACC                                                      <  SRR4302540.7125846/94‑1 (MQ=60)

                                         AGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACC                                                      <  SRR4302540.804564/94‑1 (MQ=60)

                                         AGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACC                                                      <  SRR4302540.109508/94‑1 (MQ=60)

                                          GCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCT                                                     >  SRR4302540.9799211/1‑94 (MQ=60)

                                           ggactgcgcaggcTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTAAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTC                                                    <  SRR4302540.5000456/81‑1 (MQ=60)

                                           CGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTC                                                    <  SRR4302540.3962879/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   >  SRR4302540.960040/1‑94 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   <  SRR4302540.4302936/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   <  SRR4302540.1050745/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   >  SRR4302540.4940073/1‑94 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   <  SRR4302540.2967373/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   >  SRR4302540.8945929/1‑94 (MQ=60)

                                             ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACACAAGGCTGCAACAACCTCTA                                                  >  SRR4302540.8433303/1‑94 (MQ=60)

                                             ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTC                                                  >  SRR4302540.2599261/1‑94 (MQ=60)

                                             ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTA                                                  <  SRR4302540.1710326/94‑1 (MQ=60)

                                             ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTA                                                  <  SRR4302540.2694583/94‑1 (MQ=60)

                                             ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTA                                                  <  SRR4302540.3054821/94‑1 (MQ=60)

                                              CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAC                                                 <  SRR4302540.1290865/94‑1 (MQ=60)

                                              CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAC                                                 <  SRR4302540.245523/94‑1 (MQ=60)

                                               AGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACC                                                <  SRR4302540.8359365/94‑1 (MQ=60)

                                                GCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCG                                               <  SRR4302540.9387569/94‑1 (MQ=60)

                                                GCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCG                                               <  SRR4302540.7946477/94‑1 (MQ=60)

                                                GCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCG                                               <  SRR4302540.8782239/94‑1 (MQ=60)

                                                GCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCG                                               <  SRR4302540.7858766/94‑1 (MQ=60)

                                                 CGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGT                                              >  SRR4302540.5126001/1‑94 (MQ=60)

                                                 CGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGT                                              <  SRR4302540.6595799/94‑1 (MQ=60)

                                                    AGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGG                                           >  SRR4302540.6563752/1‑94 (MQ=60)

                                                    AGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGG                                           >  SRR4302540.8162970/1‑94 (MQ=60)

                                                     GCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGC                                          <  SRR4302540.8892311/94‑1 (MQ=60)

                                                      CGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCG                                         <  SRR4302540.6266189/94‑1 (MQ=60)

                                                      CGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCG                                         >  SRR4302540.640266/1‑94 (MQ=60)

                                                      CGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCG                                         >  SRR4302540.6753201/1‑94 (MQ=60)

                                                      CGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCG                                         <  SRR4302540.1219484/94‑1 (MQ=60)

                                                       GTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGC                                        >  SRR4302540.3489206/1‑94 (MQ=60)

                                                       GTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGC                                        >  SRR4302540.9307109/1‑94 (MQ=60)

                                                       GTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGC                                        >  SRR4302540.2647092/1‑94 (MQ=60)

                                                        TATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCA                                       >  SRR4302540.3255951/1‑94 (MQ=60)

                                                         ATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCAT                                      >  SRR4302540.4225792/1‑94 (MQ=60)

                                                           CGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCT                                    <  SRR4302540.6276187/94‑1 (MQ=60)

                                                           CGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCT                                    <  SRR4302540.5959424/94‑1 (MQ=60)

                                                            GCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTT                                   <  SRR4302540.4454358/94‑1 (MQ=60)

                                                             CTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTC                                  >  SRR4302540.4533954/1‑94 (MQ=60)

                                                             CTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTC                                  >  SRR4302540.66011/1‑94 (MQ=60)

                                                             CTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTC                                  >  SRR4302540.3630604/1‑94 (MQ=60)

                                                              TCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCC                                 <  SRR4302540.7887545/94‑1 (MQ=60)

                                                              TCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCC                                 >  SRR4302540.689658/1‑94 (MQ=60)

                                                               CAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCATTGAAGCCATGCAGCGGGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCA                                <  SRR4302540.2639253/94‑1 (MQ=60)

                                                               CAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCA                                <  SRR4302540.9514851/94‑1 (MQ=60)

                                                               CAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCA                                <  SRR4302540.5969096/94‑1 (MQ=60)

                                                               CAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCA                                <  SRR4302540.1590292/94‑1 (MQ=60)

                                                                AGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAG                               >  SRR4302540.6516977/1‑94 (MQ=60)

                                                                AGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAG                               <  SRR4302540.170888/94‑1 (MQ=60)

                                                                AGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAG                               <  SRR4302540.5015516/94‑1 (MQ=60)

                                                                AGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAG                               >  SRR4302540.2739144/1‑94 (MQ=60)

                                                                 GTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGC                              <  SRR4302540.361635/94‑1 (MQ=60)

                                                                  TTTGAGCAGCAAATGGAAGTCGTTAAATCCGCTGACGCCATGCAGCGTGCACAGCAGGTTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCG                             <  SRR4302540.8427633/94‑1 (MQ=60)

                                                                  TTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCG                             <  SRR4302540.228516/94‑1 (MQ=60)

                                                                  TTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCG                             <  SRR4302540.228517/94‑1 (MQ=60)

                                                                    TGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTT                           >  SRR4302540.6478341/1‑94 (MQ=60)

                                                                    TGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTT                           >  SRR4302540.7602329/1‑94 (MQ=60)

                                                                     GAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTT                          <  SRR4302540.1152640/94‑1 (MQ=60)

                                                                      AGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTC                         <  SRR4302540.8968764/94‑1 (MQ=60)

                                                                       GCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCG                        <  SRR4302540.6494880/94‑1 (MQ=60)

                                                                        CAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGA                       <  SRR4302540.7543661/94‑1 (MQ=60)

                                                                        CAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGA                       >  SRR4302540.5968797/1‑94 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      >  SRR4302540.899444/1‑94 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      <  SRR4302540.1478887/94‑1 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      >  SRR4302540.262464/1‑94 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      <  SRR4302540.8333959/94‑1 (MQ=60)

                                                                         AGAAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      <  SRR4302540.6031395/94‑1 (MQ=60)

                                                                          GCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACA                     >  SRR4302540.7427348/1‑94 (MQ=60)

                                                                           CAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAG                    >  SRR4302540.2075402/1‑94 (MQ=60)

                                                                           CAAATGGAAGTCGTTAAAACCACTGAAGCCATGAAGCGTGCACAACAGGCTGTAACAACCTCTACCGATGGCGCATCTTGAAGCGTTTCGACAC                    >  SRR4302540.10046442/1‑94 (MQ=60)

                                                                            AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGGACACCAGGCTGTAACAACCTCTACGGTTGGCGCATCctcaggcgttttgggagc                   >  SRR4302540.9182743/1‑76 (MQ=60)

                                                                            AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGC                   <  SRR4302540.9601989/94‑1 (MQ=60)

                                                                            AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGC                   <  SRR4302540.4713309/94‑1 (MQ=60)

                                                                            AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGATGGCGCATCTTCCAGCGTTTCGACAGC                   <  SRR4302540.6818825/94‑1 (MQ=60)

                                                                             AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG                  <  SRR4302540.748185/94‑1 (MQ=60)

                                                                             AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG                  >  SRR4302540.2188939/1‑94 (MQ=60)

                                                                             AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG                  <  SRR4302540.6378198/94‑1 (MQ=60)

                                                                              ATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG                 <  SRR4302540.8228718/94‑1 (MQ=60)

                                                                              ATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG                 <  SRR4302540.2856169/94‑1 (MQ=60)

                                                                              ATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG                 <  SRR4302540.4338339/94‑1 (MQ=60)

                                                                                GGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTCCCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCA               >  SRR4302540.3574555/1‑94 (MQ=60)

                                                                                GGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCA               >  SRR4302540.7071550/1‑94 (MQ=60)

                                                                                GGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCA               >  SRR4302540.3574554/1‑94 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              <  SRR4302540.8761232/94‑1 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              <  SRR4302540.10136027/94‑1 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              >  SRR4302540.824401/1‑94 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              <  SRR4302540.1712108/94‑1 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              >  SRR4302540.8301621/1‑94 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              >  SRR4302540.6162096/1‑94 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCAAGCGTTTCGACAGCGGCAG              >  SRR4302540.3421890/1‑94 (MQ=60)

                                                                                  AAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGA             <  SRR4302540.546440/94‑1 (MQ=60)

                                                                                  AAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGA             >  SRR4302540.8859322/1‑94 (MQ=60)

                                                                                    GTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAAT           >  SRR4302540.6506360/1‑94 (MQ=60)

                                                                                    GTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAAT           <  SRR4302540.2146992/94‑1 (MQ=60)

                                                                                      CGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCC         >  SRR4302540.8865420/1‑94 (MQ=60)

                                                                                      CGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCC         >  SRR4302540.240163/1‑94 (MQ=60)

                                                                                       GTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCT        >  SRR4302540.1534111/1‑94 (MQ=60)

                                                                                       GTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCT        <  SRR4302540.5329194/94‑1 (MQ=60)

                                                                                        TTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTT       >  SRR4302540.9196568/1‑94 (MQ=60)

                                                                                         TAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA      <  SRR4302540.1997078/94‑1 (MQ=60)

                                                                                           AAACCACTGAAGGCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAA    <  SRR4302540.705972/94‑1 (MQ=60)

                                                                                           AAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAA    <  SRR4302540.2668792/94‑1 (MQ=60)

                                                                                            ACCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAA   <  SRR4302540.2223512/94‑1 (MQ=60)

                                                                                            AACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAA   <  SRR4302540.4845845/94‑1 (MQ=60)

                                                                                            AACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAA   <  SRR4302540.5946526/94‑1 (MQ=60)

                                                                                            AACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAA   <  SRR4302540.636746/94‑1 (MQ=60)

                                                                                             ACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  <  SRR4302540.8632636/94‑1 (MQ=60)

                                                                                             ACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  <  SRR4302540.299627/94‑1 (MQ=60)

                                                                                             ACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  <  SRR4302540.1275725/94‑1 (MQ=60)

AATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  >  NC_000913/4408467‑4408653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`