Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,414,467 A→G intergenic (‑119/‑63) b4189 ← / → yjfP hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,414,4670AG99.8% 1981.8 / ‑5.6 611intergenic (‑119/‑63)b4189/yjfPhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (265/344);  total (266/345)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01

Only 100 of 629 total aligned reads displayed.

GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG  >  NC_000913/4414377‑4414556
                                                                                          |                                                                                         
 gggAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCg                                                                                        >  2:2862832/1‑93 (MQ=255)
    aaTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCca                                                                                     >  1:5139074/1‑93 (MQ=255)
    aaTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCca                                                                                     <  2:4269896/93‑1 (MQ=255)
    aaTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCca                                                                                     >  1:9130984/1‑93 (MQ=255)
     aTGGTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcag                                                                                    <  1:7837841/93‑1 (MQ=255)
      tGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagc                                                                                   >  2:1436307/1‑93 (MQ=255)
       gTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagca                                                                                  <  1:9264171/93‑1 (MQ=255)
       gTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagca                                                                                  >  1:9726099/1‑93 (MQ=255)
       gTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagca                                                                                  <  1:5359277/93‑1 (MQ=255)
          cccGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGaa                                                                               <  2:3919250/93‑1 (MQ=255)
            cGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAc                                                                             <  1:758086/93‑1 (MQ=255)
             gAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACt                                                                            <  1:3164210/93‑1 (MQ=255)
              aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt                                                                           >  2:7283698/1‑93 (MQ=255)
              aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt                                                                           <  2:5469161/93‑1 (MQ=255)
               aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg                                                                          >  2:3221518/1‑93 (MQ=255)
                 tGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtgtg                                                                        <  1:5691833/93‑1 (MQ=255)
                  gTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGc                                                                       <  1:6404852/93‑1 (MQ=255)
                    tACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTa                                                                     >  1:4479729/1‑93 (MQ=255)
                     aCCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTaa                                                                    >  2:9650698/1‑93 (MQ=255)
                     aCCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTaa                                                                    <  2:1187128/93‑1 (MQ=255)
                      ccTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAg                                                                   <  1:3246010/93‑1 (MQ=255)
                       cTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAgg                                                                  >  1:2861027/1‑93 (MQ=255)
                       cTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAgg                                                                  >  2:6511236/1‑93 (MQ=255)
                        tGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGa                                                                 >  1:8724952/1‑93 (MQ=255)
                          gtgcgcgATTTTCGATTGAAAGCCTGACGAACACGTAAACTACATCTCAACAGTTTGAACTAATGCCGCCAGCAGAAACTTGTGGTAAGCAtt                                                               <  2:2343601/90‑1 (MQ=255)
                            aCGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttc                                                             <  2:4782508/93‑1 (MQ=255)
                             cgcgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttct                                                            <  2:7034048/93‑1 (MQ=255)
                             cgcgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttct                                                            >  1:9478981/1‑93 (MQ=255)
                             cgcgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttct                                                            <  1:5770735/93‑1 (MQ=255)
                                gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa                                                         <  2:7899045/93‑1 (MQ=255)
                                 aTTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAt                                                        >  1:6842854/1‑93 (MQ=255)
                                 aTTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAt                                                        >  2:6680862/1‑93 (MQ=255)
                                  ttttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATg                                                       <  2:3978809/93‑1 (MQ=255)
                                   tttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGt                                                      >  1:8460331/1‑93 (MQ=255)
                                    ttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTc                                                     <  1:2786702/93‑1 (MQ=255)
                                     tCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCa                                                    <  1:9998803/93‑1 (MQ=255)
                                     tCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCa                                                    <  2:5639731/93‑1 (MQ=255)
                                        aaTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAc                                                 <  1:6572343/93‑1 (MQ=255)
                                        aaTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAc                                                 >  2:5813581/1‑93 (MQ=255)
                                        aaTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAc                                                 >  1:4206435/1‑93 (MQ=255)
                                        aaTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAc                                                 <  1:8602597/93‑1 (MQ=255)
                                        aaTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAc                                                 >  2:9455414/1‑93 (MQ=255)
                                         aTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAcc                                                <  2:4490049/93‑1 (MQ=255)
                                         aTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAcc                                                >  2:3649730/1‑93 (MQ=255)
                                           gAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAg                                              >  1:8071465/1‑93 (MQ=255)
                                           gAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAg                                              <  2:2674543/93‑1 (MQ=255)
                                           gAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAg                                              <  2:8572952/93‑1 (MQ=255)
                                            aaaaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTACGGATTTCTTAATGTAGTACAAGa                                             >  1:5043439/1‑93 (MQ=255)
                                            aaaaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGa                                             >  1:7692143/1‑93 (MQ=255)
                                              aaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACa                                           >  2:953221/1‑93 (MQ=255)
                                              aaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACa                                           >  1:3754490/1‑93 (MQ=255)
                                                 gTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaa                                        <  1:7054645/93‑1 (MQ=255)
                                                  tGACGAAAGCGTACCCCACATCTCAACATTATGAACTCATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       <  2:4670050/93‑1 (MQ=255)
                                                  tGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       >  2:8227971/1‑93 (MQ=255)
                                                  tGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       <  2:5270936/93‑1 (MQ=255)
                                                  tGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       <  2:5095402/93‑1 (MQ=255)
                                                   gACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAg                                      <  2:8036954/93‑1 (MQ=255)
                                                    aCGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAgg                                     <  1:6737651/93‑1 (MQ=255)
                                                     cGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGga                                    <  1:304775/93‑1 (MQ=255)
                                                     cGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGga                                    <  1:2006944/93‑1 (MQ=255)
                                                      gAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgag                                   <  2:1631387/93‑1 (MQ=255)
                                                      gAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgag                                   <  1:9385509/93‑1 (MQ=255)
                                                       aaaGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgaga                                  <  2:9198261/93‑1 (MQ=255)
                                                          gCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAc                               <  1:3840957/93‑1 (MQ=255)
                                                          gCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAc                               <  2:4932229/93‑1 (MQ=255)
                                                          gCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAc                               <  1:2484338/93‑1 (MQ=255)
                                                          gCGTAACCCACATCTCAACATGATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAc                               >  1:1823190/1‑93 (MQ=255)
                                                           cGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACa                              >  2:3419562/1‑93 (MQ=255)
                                                            gTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAg                             >  2:5991487/1‑93 (MQ=255)
                                                             tAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAga                            <  2:8389121/93‑1 (MQ=255)
                                                             tAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAga                            >  2:6338203/1‑93 (MQ=255)
                                                              aaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgat                           >  1:4781887/1‑93 (MQ=255)
                                                                cccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatga                         <  1:1004290/93‑1 (MQ=255)
                                                                 ccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatgat                        >  1:3947635/1‑93 (MQ=255)
                                                                 ccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatgat                        >  1:157989/1‑93 (MQ=255)
                                                                    caTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAACGGAGAGACAGATGATTGa                     >  1:1460531/1‑93 (MQ=255)
                                                                      tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa                   <  2:6867572/93‑1 (MQ=255)
                                                                      tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa                   <  1:1104487/93‑1 (MQ=255)
                                                                      tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa                   <  1:6683880/93‑1 (MQ=255)
                                                                       ctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAt                  >  2:1933007/1‑93 (MQ=255)
                                                                        tcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATa                 <  1:3382945/93‑1 (MQ=255)
                                                                        tcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATa                 <  2:7147495/93‑1 (MQ=255)
                                                                         cAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAg                >  1:1260750/1‑93 (MQ=255)
                                                                          aaCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGa               >  1:5984103/1‑93 (MQ=255)
                                                                          aaCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGa               >  2:8956214/1‑93 (MQ=255)
                                                                           aCATTATGAACTAATGCCGCCAGCAGAAGCTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa              <  1:7971067/93‑1 (MQ=255)
                                                                           aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa              <  2:6262886/93‑1 (MQ=255)
                                                                             aTTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATc            <  1:734827/93‑1 (MQ=255)
                                                                              ttATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCa           <  2:7418902/93‑1 (MQ=255)
                                                                               tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc          >  1:2604662/1‑93 (MQ=255)
                                                                               tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc          <  2:2124511/93‑1 (MQ=255)
                                                                               tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc          >  1:3582312/1‑93 (MQ=255)
                                                                               tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc          >  1:8184789/1‑93 (MQ=255)
                                                                               tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc          >  1:7183737/1‑93 (MQ=255)
                                                                                aTGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAcg         <  2:2547089/93‑1 (MQ=255)
                                                                                 tGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAcgc        >  1:989505/1‑93 (MQ=255)
                                                                                    aCTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAg     <  2:5049009/93‑1 (MQ=255)
                                                                                     cTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGc    <  1:2329256/93‑1 (MQ=255)
                                                                                     cTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGc    <  2:3110910/93‑1 (MQ=255)
                                                                                     cTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGc    <  1:6190528/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG  >  NC_000913/4414377‑4414556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 359 total aligned reads displayed.
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG  >  NC_000913/4414374‑4414560
                                                                                             |                                                                                             
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTTGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATG                                                                                               <  SRR4302540.8977390/94‑1 (MQ=60)
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATG                                                                                               <  SRR4302540.8753981/94‑1 (MQ=60)
 TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC                                                                                              <  SRR4302540.3967447/94‑1 (MQ=60)
 TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC                                                                                              >  SRR4302540.7785905/1‑94 (MQ=60)
  GGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCC                                                                                             >  SRR4302540.9402/1‑94 (MQ=60)
  GGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCC                                                                                             >  SRR4302540.6690627/1‑94 (MQ=60)
   GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCG                                                                                            <  SRR4302540.945288/94‑1 (MQ=60)
   GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCG                                                                                            >  SRR4302540.2407054/1‑94 (MQ=60)
    GGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGC                                                                                           <  SRR4302540.391967/94‑1 (MQ=60)
    GGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGC                                                                                           >  SRR4302540.2818257/1‑94 (MQ=60)
     GGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCC                                                                                          >  SRR4302540.6757868/1‑94 (MQ=60)
     GGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCC                                                                                          >  SRR4302540.5329092/1‑94 (MQ=60)
      GAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCA                                                                                         <  SRR4302540.7357276/94‑1 (MQ=60)
      GAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCA                                                                                         >  SRR4302540.5194743/1‑94 (MQ=60)
      GAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCA                                                                                         >  SRR4302540.9753643/1‑94 (MQ=60)
        ATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGC                                                                                       >  SRR4302540.6369387/1‑94 (MQ=60)
        ATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGC                                                                                       >  SRR4302540.10100997/1‑94 (MQ=60)
        ATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGA                                                                                       >  SRR4302540.3693728/1‑94 (MQ=60)
         TGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCA                                                                                      <  SRR4302540.6786429/94‑1 (MQ=60)
         TGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCA                                                                                      >  SRR4302540.9840335/1‑94 (MQ=60)
          GTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAG                                                                                     <  SRR4302540.6823008/94‑1 (MQ=60)
          GTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAG                                                                                     <  SRR4302540.5418139/94‑1 (MQ=60)
           TTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGA                                                                                    >  SRR4302540.9348810/1‑94 (MQ=60)
           TTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGA                                                                                    <  SRR4302540.6747567/94‑1 (MQ=60)
           TTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAACAGTAGCCCCCATCTCAACATTATGAACTAATGCCGCCAGCACA                                                                                    >  SRR4302540.8722360/1‑94 (MQ=60)
            TCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAA                                                                                   <  SRR4302540.4677964/94‑1 (MQ=60)
            TCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAA                                                                                   <  SRR4302540.6725455/94‑1 (MQ=60)
             CCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAC                                                                                  >  SRR4302540.677354/1‑94 (MQ=60)
             CCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAA                                                                                  >  SRR4302540.2936376/1‑94 (MQ=60)
             CCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAA                                                                                  >  SRR4302540.9936884/1‑94 (MQ=60)
              CCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAC                                                                                 >  SRR4302540.6940852/1‑94 (MQ=60)
              CCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAC                                                                                 >  SRR4302540.4384585/1‑94 (MQ=60)
              CCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAC                                                                                 <  SRR4302540.8612435/94‑1 (MQ=60)
              CCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAC                                                                                 <  SRR4302540.6116876/94‑1 (MQ=60)
               CGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACT                                                                                <  SRR4302540.766155/94‑1 (MQ=60)
               CGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACT                                                                                <  SRR4302540.9578442/94‑1 (MQ=60)
               CGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACT                                                                                <  SRR4302540.9796905/94‑1 (MQ=60)
               CGAATTGATACCTGGTACGCTATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACT                                                                                <  SRR4302540.7281856/94‑1 (MQ=60)
                GAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTT                                                                               <  SRR4302540.3198624/94‑1 (MQ=60)
                GAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTT                                                                               <  SRR4302540.8101625/94‑1 (MQ=60)
                GAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTT                                                                               <  SRR4302540.8515720/94‑1 (MQ=60)
                GAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTT                                                                               <  SRR4302540.2374643/94‑1 (MQ=60)
                   TTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTG                                                                            <  SRR4302540.6841262/94‑1 (MQ=60)
                    TGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGC                                                                           <  SRR4302540.5754495/94‑1 (MQ=60)
                      TTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTA                                                                         <  SRR4302540.6079378/94‑1 (MQ=60)
                      TTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTA                                                                         >  SRR4302540.4528311/1‑94 (MQ=60)
                        ACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAG                                                                       <  SRR4302540.9140458/94‑1 (MQ=60)
                         CCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGG                                                                      >  SRR4302540.1412665/1‑94 (MQ=60)
                         CCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGG                                                                      >  SRR4302540.2892042/1‑94 (MQ=60)
                         CCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGG                                                                      >  SRR4302540.8050953/1‑94 (MQ=60)
                           TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT                                                                    >  SRR4302540.3573650/1‑94 (MQ=60)
                           TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT                                                                    >  SRR4302540.1037699/1‑94 (MQ=60)
                             GTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTT                                                                  >  SRR4302540.3047803/1‑94 (MQ=60)
                             GTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTT                                                                  <  SRR4302540.8218647/94‑1 (MQ=60)
                             GTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTT                                                                  >  SRR4302540.199595/1‑94 (MQ=60)
                             GTACGATATTTTCGAATGAAAACGTGGCGAAATCGTACCGCACCTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTTTGCTAAGGATTT                                                                  <  SRR4302540.2524741/94‑1 (MQ=60)
                              TACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGGTTTC                                                                 >  SRR4302540.4712433/1‑94 (MQ=60)
                              TACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTC                                                                 >  SRR4302540.1267862/1‑94 (MQ=60)
                              TACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCAGCCAGCAGAAACTTGTGCTAAGGATTTT                                                                 >  SRR4302540.8609319/1‑94 (MQ=60)
                               ACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCT                                                                <  SRR4302540.4115089/94‑1 (MQ=60)
                                CGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTT                                                               <  SRR4302540.10161655/94‑1 (MQ=60)
                                CGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTT                                                               >  SRR4302540.5985822/1‑94 (MQ=60)
                                 GCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTC                                                              <  SRR4302540.179035/94‑1 (MQ=60)
                                 GCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTC                                                              >  SRR4302540.3549597/1‑94 (MQ=60)
                                  CGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCA                                                             <  SRR4302540.6408145/94‑1 (MQ=60)
                                  CGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCA                                                             <  SRR4302540.4413328/94‑1 (MQ=60)
                                   GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT                                                            <  SRR4302540.9254978/94‑1 (MQ=60)
                                   GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT                                                            >  SRR4302540.6918654/1‑94 (MQ=60)
                                   GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT                                                            <  SRR4302540.10054318/94‑1 (MQ=60)
                                   GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT                                                            <  SRR4302540.10054319/94‑1 (MQ=60)
                                    ATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATA                                                           <  SRR4302540.2616268/94‑1 (MQ=60)
                                    ATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCAAGCAGAAACTTGTGCTAAGGATTTCTTCATG                                                           >  SRR4302540.3501250/1‑94 (MQ=60)
                                     TTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGT                                                          >  SRR4302540.3716214/1‑94 (MQ=60)
                                     TTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGT                                                          >  SRR4302540.1593311/1‑94 (MQ=60)
                                     TTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGT                                                          >  SRR4302540.8558560/1‑94 (MQ=60)
                                       TTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCA                                                        <  SRR4302540.1177594/94‑1 (MQ=60)
                                       TTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCA                                                        <  SRR4302540.1061631/94‑1 (MQ=60)
                                        TCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAT                                                       <  SRR4302540.10115298/94‑1 (MQ=60)
                                         TGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGTCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATA                                                      <  SRR4302540.7007083/94‑1 (MQ=60)
                                         CGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATA                                                      >  SRR4302540.5472093/1‑94 (MQ=60)
                                          GAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAACCTTGTCCTAAGGATTTCTTCATGTCATAC                                                     >  SRR4302540.8024745/1‑94 (MQ=60)
                                          GAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAC                                                     >  SRR4302540.4252222/1‑94 (MQ=60)
                                          GAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAC                                                     >  SRR4302540.4401788/1‑94 (MQ=60)
                                           AATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACC                                                    <  SRR4302540.6645157/94‑1 (MQ=60)
                                           AATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACC                                                    >  SRR4302540.6540218/1‑94 (MQ=60)
                                           AATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACC                                                    <  SRR4302540.8702576/94‑1 (MQ=60)
                                            ATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCA                                                   >  SRR4302540.5158603/1‑94 (MQ=60)
                                             TGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAG                                                  <  SRR4302540.2695645/94‑1 (MQ=60)
                                             TGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAG                                                  >  SRR4302540.8165117/1‑94 (MQ=60)
                                             TGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAG                                                  <  SRR4302540.7767272/94‑1 (MQ=60)
                                              GAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGA                                                 >  SRR4302540.5097994/1‑94 (MQ=60)
                                              GAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGA                                                 <  SRR4302540.3926257/94‑1 (MQ=60)
                                               AAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGAC                                                >  SRR4302540.9594190/1‑94 (MQ=60)
                                               AAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGAC                                                <  SRR4302540.5032248/94‑1 (MQ=60)
                                                AAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACA                                               >  SRR4302540.3795447/1‑94 (MQ=60)
                                                 AACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAA                                              <  SRR4302540.9562611/94‑1 (MQ=60)
                                                   CGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAA                                            <  SRR4302540.4013020/94‑1 (MQ=60)
                                                   CGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAA                                            >  SRR4302540.6527142/1‑94 (MQ=60)
                                                    GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA                                           >  SRR4302540.108881/1‑94 (MQ=60)
                                                    GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA                                           <  SRR4302540.7133099/94‑1 (MQ=60)
                                                    GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA                                           <  SRR4302540.7647494/94‑1 (MQ=60)
                                                    GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA                                           >  SRR4302540.3262922/1‑94 (MQ=60)
                                                    GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA                                           >  SRR4302540.8778264/1‑94 (MQ=60)
                                                     TGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAG                                          <  SRR4302540.5246938/94‑1 (MQ=60)
                                                     TGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAG                                          <  SRR4302540.3093310/94‑1 (MQ=60)
                                                     TGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAG                                          <  SRR4302540.1353399/94‑1 (MQ=60)
                                                      GACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGG                                         <  SRR4302540.7236633/94‑1 (MQ=60)
                                                       ACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGA                                        <  SRR4302540.7211904/94‑1 (MQ=60)
                                                       ACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGA                                        >  SRR4302540.7410768/1‑94 (MQ=60)
                                                       ACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGA                                        <  SRR4302540.6812075/94‑1 (MQ=60)
                                                         GAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGA                                      <  SRR4302540.7501156/94‑1 (MQ=60)
                                                         GAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGA                                      <  SRR4302540.9992226/94‑1 (MQ=60)
                                                         GAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGA                                      <  SRR4302540.9497218/94‑1 (MQ=60)
                                                         GAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGA                                      <  SRR4302540.3165467/94‑1 (MQ=60)
                                                         GAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGA                                      >  SRR4302540.3799493/1‑94 (MQ=60)
                                                          AAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAG                                     >  SRR4302540.6562925/1‑94 (MQ=60)
                                                           AAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGA                                    <  SRR4302540.1627753/94‑1 (MQ=60)
                                                            AGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAC                                   <  SRR4302540.9440296/94‑1 (MQ=60)
                                                            AGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAC                                   >  SRR4302540.5260367/1‑94 (MQ=60)
                                                            AGCGTAACCCACATCTCAACATGATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAC                                   >  SRR4302540.1843113/1‑94 (MQ=60)
                                                             GCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACA                                  <  SRR4302540.3130286/94‑1 (MQ=60)
                                                             GCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACA                                  <  SRR4302540.2511105/94‑1 (MQ=60)
                                                             GCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACA                                  <  SRR4302540.3882728/94‑1 (MQ=60)
                                                               GTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGA                                >  SRR4302540.2869769/1‑94 (MQ=60)
                                                               GTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGA                                >  SRR4302540.5173025/1‑94 (MQ=60)
                                                                TAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGAT                               >  SRR4302540.4833007/1‑94 (MQ=60)
                                                                TAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGAT                               <  SRR4302540.7927275/94‑1 (MQ=60)
                                                                TAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGAT                               <  SRR4302540.2877858/94‑1 (MQ=60)
                                                                 AACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATG                              >  SRR4302540.1949343/1‑94 (MQ=60)
                                                                 AACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATG                              >  SRR4302540.5836956/1‑94 (MQ=60)
                                                                 AACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATG                              >  SRR4302540.8651782/1‑94 (MQ=60)
                                                                   CCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGAT                            <  SRR4302540.7964385/94‑1 (MQ=60)
                                                                   CCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGAT                            >  SRR4302540.159587/1‑94 (MQ=60)
                                                                   CCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGAT                            >  SRR4302540.3990255/1‑94 (MQ=60)
                                                                   CCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGAT                            <  SRR4302540.6670689/94‑1 (MQ=60)
                                                                    CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATT                           >  SRR4302540.9946456/1‑94 (MQ=60)
                                                                    CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATT                           <  SRR4302540.759789/94‑1 (MQ=60)
                                                                    CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATT                           <  SRR4302540.5809246/94‑1 (MQ=60)
                                                                    CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATT                           >  SRR4302540.1938642/1‑94 (MQ=60)
                                                                    CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATG                           >  SRR4302540.5042990/1‑94 (MQ=60)
                                                                      ACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAACGGAGAGACAGATGATTGA                         >  SRR4302540.1476437/1‑94 (MQ=60)
                                                                       CATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAA                        <  SRR4302540.7183243/94‑1 (MQ=60)
                                                                       CATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAAAGACTGATGATTGAA                        >  SRR4302540.8189823/1‑94 (MQ=60)
                                                                        ATCTCAACATTATGAACTAATTCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAGCAGACAAAAAGGAGAGACAGATGATTGAAA                       >  SRR4302540.5777782/1‑94 (MQ=60)
                                                                        ATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAA                       >  SRR4302540.3408417/1‑94 (MQ=60)
                                                                        ATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTCCAGGTCAGACCGGAGAAAAAGGAGAGACAGATGATTGCAA                       >  SRR4302540.1229262/1‑94 (MQ=60)
                                                                         TCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAT                      <  SRR4302540.1576847/94‑1 (MQ=60)
                                                                         TCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAT                      <  SRR4302540.1115874/94‑1 (MQ=60)
                                                                         TCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAT                      >  SRR4302540.7682867/1‑94 (MQ=60)
                                                                          CTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATA                     >  SRR4302540.5815119/1‑94 (MQ=60)
                                                                          CTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATA                     <  SRR4302540.8138690/94‑1 (MQ=60)
                                                                           TCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAG                    >  SRR4302540.6265439/1‑94 (MQ=60)
                                                                           TCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAG                    <  SRR4302540.3419872/94‑1 (MQ=60)
                                                                           TCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAG                    >  SRR4302540.1273682/1‑94 (MQ=60)
                                                                            CAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGA                   >  SRR4302540.6050375/1‑94 (MQ=60)
                                                                            CAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGA                   >  SRR4302540.3382116/1‑94 (MQ=60)
                                                                             AACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAA                  <  SRR4302540.2710670/94‑1 (MQ=60)
                                                                             AACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTAATACCAGACAAAAAGGAGAGACAGATGATTGAAATCGAA                  >  SRR4302540.3249797/1‑94 (MQ=60)
                                                                              ACATTATGAACTAATGCCGCCAGCAGAAGCTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT                 <  SRR4302540.8063949/94‑1 (MQ=60)
                                                                              ACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT                 <  SRR4302540.9222105/94‑1 (MQ=60)
                                                                               CATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATC                <  SRR4302540.382795/94‑1 (MQ=60)
                                                                               CATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATA                >  SRR4302540.2554131/1‑94 (MQ=60)
                                                                                ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               >  SRR4302540.7814429/1‑94 (MQ=60)
                                                                                ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               <  SRR4302540.9364017/94‑1 (MQ=60)
                                                                                ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               <  SRR4302540.742683/94‑1 (MQ=60)
                                                                                ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               <  SRR4302540.9537412/94‑1 (MQ=60)
                                                                                ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               >  SRR4302540.8850441/1‑94 (MQ=60)
                                                                                ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               <  SRR4302540.7894524/94‑1 (MQ=60)
                                                                                ATTAGGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               <  SRR4302540.828824/94‑1 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              >  SRR4302540.3210592/1‑94 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302540.8805776/94‑1 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302540.5932940/94‑1 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302540.2677766/94‑1 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              >  SRR4302540.2632760/1‑94 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              >  SRR4302540.3621752/1‑94 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302540.8406897/94‑1 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              >  SRR4302540.8279868/1‑94 (MQ=60)
                                                                                 TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              >  SRR4302540.8140518/1‑94 (MQ=60)
                                                                                  TATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACG             >  SRR4302540.2213821/1‑94 (MQ=60)
                                                                                  TATGAACTAATGCCGCAAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACG             <  SRR4302540.4864868/94‑1 (MQ=60)
                                                                                   ATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGC            >  SRR4302540.411940/1‑94 (MQ=60)
                                                                                    TGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCG           <  SRR4302540.5681642/94‑1 (MQ=60)
                                                                                      AACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAG         <  SRR4302540.225482/94‑1 (MQ=60)
                                                                                      AACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAG         <  SRR4302540.3361479/94‑1 (MQ=60)
                                                                                      AACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAG         >  SRR4302540.1512382/1‑94 (MQ=60)
                                                                                       ACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGC        >  SRR4302540.7692900/1‑94 (MQ=60)
                                                                                       ACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGC        <  SRR4302540.1434905/94‑1 (MQ=60)
                                                                                        CTAATGCCGCCAGCAGAAACTTGTGCTAATGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT       >  SRR4302540.3076049/1‑94 (MQ=60)
                                                                                        CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT       <  SRR4302540.6995599/94‑1 (MQ=60)
                                                                                        CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT       <  SRR4302540.2354343/94‑1 (MQ=60)
                                                                                        CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT       <  SRR4302540.6259450/94‑1 (MQ=60)
                                                                                        CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT       >  SRR4302540.3852284/1‑94 (MQ=60)
                                                                                         TAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG      <  SRR4302540.2074882/94‑1 (MQ=60)
                                                                                          AATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGG     >  SRR4302540.9404685/1‑94 (MQ=60)
                                                                                          AATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGC     >  SRR4302540.2911817/1‑94 (MQ=60)
                                                                                           ATGCCGCCAGCAGAACCTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGC    <  SRR4302540.627440/94‑1 (MQ=60)
                                                                                           ATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGC    <  SRR4302540.3009956/94‑1 (MQ=60)
                                                                                           ATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGC    <  SRR4302540.5983320/94‑1 (MQ=60)
                                                                                            TGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCA   <  SRR4302540.214154/94‑1 (MQ=60)
                                                                                            TGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCA   >  SRR4302540.780793/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG  >  NC_000913/4414374‑4414560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑