Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,414,467 |
A→G |
intergenic (‑119/‑63) |
b4189 ← / → yjfP |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,414,467 | 0 | A | G | 100.0%
| 712.5
/ NA
| 219 | intergenic (‑119/‑63) | b4189/yjfP | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (89/130); total (89/130) |
Only 100 of 226 total aligned reads displayed.
GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG > NC_000913/4414377‑4414556
|
gggAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCg < 1:798469/93‑1 (MQ=255)
ggAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGc < 1:4585862/93‑1 (MQ=255)
ggAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGc > 1:4706840/1‑93 (MQ=255)
ggAATGTTCCCGAATTGTTACCTGGTACGCGATTTTAGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGc < 1:4854740/93‑1 (MQ=255)
gAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATgccgcc > 1:1814604/1‑93 (MQ=255)
gAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATgccgcc < 2:1161534/93‑1 (MQ=255)
aaTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCca < 1:3561962/93‑1 (MQ=255)
aTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcag > 2:5374894/1‑93 (MQ=255)
gTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagca > 2:5327652/1‑93 (MQ=255)
ttCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagcag > 1:4957564/1‑93 (MQ=255)
cGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAc < 1:1333472/93‑1 (MQ=255)
gAATTGTTACCTGGTACTCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGGACTAATGCCGCCAGCAGAAACt < 1:1020434/93‑1 (MQ=255)
gAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACt < 2:1044798/93‑1 (MQ=255)
aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt < 2:3186205/93‑1 (MQ=255)
aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt < 1:3673600/93‑1 (MQ=255)
aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt > 1:5578777/1‑93 (MQ=255)
aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt > 2:4418662/1‑93 (MQ=255)
aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg < 1:5735720/93‑1 (MQ=255)
ttGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtgt > 1:5946376/1‑93 (MQ=255)
ttGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtgt < 2:4879029/93‑1 (MQ=255)
aCCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTaa < 2:2831549/93‑1 (MQ=255)
cTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAgg < 2:1591874/93‑1 (MQ=255)
cTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAgg < 2:2478172/93‑1 (MQ=255)
cTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAgg < 1:1147241/93‑1 (MQ=255)
tGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGa < 1:3749082/93‑1 (MQ=255)
gTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAtt > 2:3437350/1‑93 (MQ=255)
cgcgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttct > 2:1710212/1‑93 (MQ=255)
cgcgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttct > 2:754838/1‑93 (MQ=255)
gcgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttctt > 1:907950/1‑93 (MQ=255)
cgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttcttc > 2:353510/1‑93 (MQ=255)
gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa < 2:1976450/93‑1 (MQ=255)
gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa < 1:2291654/93‑1 (MQ=255)
gATTGTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa < 1:275850/93‑1 (MQ=255)
aTTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAt < 2:2925802/93‑1 (MQ=255)
aTTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAt > 2:1434309/1‑93 (MQ=255)
ttttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATg > 1:4772607/1‑93 (MQ=255)
tttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGt < 2:3611868/93‑1 (MQ=255)
ttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTc < 2:2120843/93‑1 (MQ=255)
ttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTc > 2:1881853/1‑93 (MQ=255)
cGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAt > 2:5919891/1‑93 (MQ=255)
cGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAt < 2:3950540/93‑1 (MQ=255)
gAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATa < 1:3174568/93‑1 (MQ=255)
gAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATa > 2:3671989/1‑93 (MQ=255)
aaTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAc < 2:2166223/93‑1 (MQ=255)
aTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAcc < 2:2741899/93‑1 (MQ=255)
tGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCa < 2:220122/93‑1 (MQ=255)
tGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCa > 2:2412006/1‑93 (MQ=255)
gAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAg < 2:382842/93‑1 (MQ=255)
aaaaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGa > 1:2054045/1‑93 (MQ=255)
aaaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGAc < 1:1861209/93‑1 (MQ=255)
aaaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGAc > 2:5711650/1‑93 (MQ=255)
aCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaa > 2:66932/1‑93 (MQ=255)
aCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaa < 2:4710947/93‑1 (MQ=255)
aCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaa < 1:4023015/93‑1 (MQ=255)
gTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaa > 2:4243166/1‑93 (MQ=255)
gTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaa > 1:5466931/1‑93 (MQ=255)
gTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaa < 1:462424/93‑1 (MQ=255)
gACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAg < 1:2970748/93‑1 (MQ=255)
aCGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAgg < 1:4757122/93‑1 (MQ=255)
aCGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAgg < 2:875280/93‑1 (MQ=255)
cGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGga < 2:158136/93‑1 (MQ=255)
aaaGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgaga > 2:1272558/1‑93 (MQ=255)
aaaGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgaga < 2:6040814/93‑1 (MQ=255)
gCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAc < 1:747011/93‑1 (MQ=255)
gTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAg > 2:2018303/1‑93 (MQ=255)
aaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgat < 2:1795716/93‑1 (MQ=255)
aaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgat < 2:5777010/93‑1 (MQ=255)
aaCACACATATCAACATTATGAACTAATGCCGCCAGCAGAAGCTTGTGCTAAGGATTTCTTCATGTCATACCAGCCAAAAAGGAGCGACAgat < 2:4949237/93‑1 (MQ=255)
aCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatg < 2:237510/93‑1 (MQ=255)
aCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatg > 1:957288/1‑93 (MQ=255)
cccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatga < 2:3000040/93‑1 (MQ=255)
cccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatga < 2:56942/93‑1 (MQ=255)
ccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatgat < 2:4114495/93‑1 (MQ=255)
acaTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTg > 1:4294317/1‑93 (MQ=255)
caTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGa > 2:2867961/1‑93 (MQ=255)
aTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaa > 1:3095346/1‑93 (MQ=255)
tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa < 1:4191153/93‑1 (MQ=255)
ctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAt > 2:521111/1‑93 (MQ=255)
ctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCATCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAt < 1:4448163/93‑1 (MQ=255)
tcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATa > 2:918052/1‑93 (MQ=255)
aaCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGa < 1:715780/93‑1 (MQ=255)
aaCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGa > 1:4843914/1‑93 (MQ=255)
aaCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGa > 1:4526939/1‑93 (MQ=255)
aaCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTATTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGa < 2:5093311/93‑1 (MQ=255)
aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa < 1:6294404/93‑1 (MQ=255)
aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa < 1:5109214/93‑1 (MQ=255)
aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa > 2:5523951/1‑93 (MQ=255)
cATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAt < 2:2611911/93‑1 (MQ=255)
cATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAt > 1:3028694/1‑93 (MQ=255)
cATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAt < 1:3211193/93‑1 (MQ=255)
aTTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATc < 2:4665564/93‑1 (MQ=255)
aTTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATc < 1:1612133/93‑1 (MQ=255)
ttATGAACTAATGCCGCCAGCAGAAGCTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCa < 1:3904913/93‑1 (MQ=255)
tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc < 1:5599246/93‑1 (MQ=255)
tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc < 1:2565373/93‑1 (MQ=255)
tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc < 2:1378910/93‑1 (MQ=255)
tGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAcgc > 1:2353148/1‑93 (MQ=255)
gAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAcgcg > 1:2479787/1‑93 (MQ=255)
tAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCt > 2:891283/1‑93 (MQ=255)
tAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCt < 1:1425522/93‑1 (MQ=255)
|
GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG > NC_000913/4414377‑4414556
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG > NC_000913/4414374‑4414560
|
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATG < SRR4302533.1236489/94‑1 (MQ=60)
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATG < SRR4302533.2620751/94‑1 (MQ=60)
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATG < SRR4302533.2288649/94‑1 (MQ=60)
TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC < SRR4302533.5319551/94‑1 (MQ=60)
TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC > SRR4302533.2335744/1‑94 (MQ=60)
GGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGC > SRR4302533.4735365/1‑94 (MQ=60)
GGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGC < SRR4302533.803167/94‑1 (MQ=60)
GGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCC < SRR4302533.4613642/94‑1 (MQ=60)
GGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCC < SRR4302533.4884158/94‑1 (MQ=60)
GGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCC < SRR4302533.3415338/94‑1 (MQ=60)
GGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCC > SRR4302533.1825682/1‑94 (MQ=60)
GGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTAGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCC < SRR4302533.4884160/94‑1 (MQ=60)
GAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCA > SRR4302533.5577092/1‑94 (MQ=60)
AATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAG > SRR4302533.4531936/1‑94 (MQ=60)
AATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAG < SRR4302533.3583908/94‑1 (MQ=60)
GTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAG > SRR4302533.3064024/1‑94 (MQ=60)
GTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAG > SRR4302533.4987598/1‑94 (MQ=60)
CGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACT < SRR4302533.1341475/94‑1 (MQ=60)
CGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACT > SRR4302533.1058859/1‑94 (MQ=60)
CGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACT < SRR4302533.456833/94‑1 (MQ=60)
GAATTGTTACCTGGTACTCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGGACTAATGCCGCCAGCAGAAACTT < SRR4302533.1026428/94‑1 (MQ=60)
GAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTT > SRR4302533.5612492/1‑94 (MQ=60)
AATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTG < SRR4302533.1477502/94‑1 (MQ=60)
AATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTG < SRR4302533.3696176/94‑1 (MQ=60)
ATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGT > SRR4302533.5982338/1‑94 (MQ=60)
ATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGT < SRR4302533.5770341/94‑1 (MQ=60)
TTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTG > SRR4302533.2705116/1‑94 (MQ=60)
GTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCT < SRR4302533.4703176/94‑1 (MQ=60)
CTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGA < SRR4302533.1154087/94‑1 (MQ=60)
TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT < SRR4302533.3772066/94‑1 (MQ=60)
ACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCT < SRR4302533.1379594/94‑1 (MQ=60)
CGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTT < SRR4302533.1841036/94‑1 (MQ=60)
CGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTT > SRR4302533.913275/1‑94 (MQ=60)
GCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTC > SRR4302533.5729276/1‑94 (MQ=60)
CGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCA > SRR4302533.5664366/1‑94 (MQ=60)
CGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCA < SRR4302533.6168011/94‑1 (MQ=60)
GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT > SRR4302533.5036510/1‑94 (MQ=60)
GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT < SRR4302533.2305842/94‑1 (MQ=60)
GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT < SRR4302533.913878/94‑1 (MQ=60)
GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT > SRR4302533.4647544/1‑94 (MQ=60)
GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT < SRR4302533.698165/94‑1 (MQ=60)
GATTGTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT < SRR4302533.277529/94‑1 (MQ=60)
ATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATG < SRR4302533.4380940/94‑1 (MQ=60)
ATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATG > SRR4302533.4801530/1‑94 (MQ=60)
TTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGT < SRR4302533.5799572/94‑1 (MQ=60)
TCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAT < SRR4302533.4607591/94‑1 (MQ=60)
TCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAT < SRR4302533.1185976/94‑1 (MQ=60)
CGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATA < SRR4302533.3030418/94‑1 (MQ=60)
GAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAC < SRR4302533.3194102/94‑1 (MQ=60)
GAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGA > SRR4302533.3212896/1‑94 (MQ=60)
GAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGA > SRR4302533.2066718/1‑94 (MQ=60)
AAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACA < SRR4302533.1872557/94‑1 (MQ=60)
ACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAA < SRR4302533.4047509/94‑1 (MQ=60)
CGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAA > SRR4302533.5499882/1‑94 (MQ=60)
GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA < SRR4302533.465182/94‑1 (MQ=60)
GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA > SRR4302533.811722/1‑94 (MQ=60)
GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA > SRR4302533.3656329/1‑94 (MQ=60)
TGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAG < SRR4302533.2849232/94‑1 (MQ=60)
GACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGG > SRR4302533.4972866/1‑94 (MQ=60)
GACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGG > SRR4302533.3136351/1‑94 (MQ=60)
GACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGG < SRR4302533.2988915/94‑1 (MQ=60)
ACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGA < SRR4302533.3751089/94‑1 (MQ=60)
ACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGA < SRR4302533.4785986/94‑1 (MQ=60)
AAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGA < SRR4302533.794355/94‑1 (MQ=60)
AGCGTAATCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAC < SRR4302533.2031985/94‑1 (MQ=60)
AGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAC < SRR4302533.5615989/94‑1 (MQ=60)
GCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACA < SRR4302533.751410/94‑1 (MQ=60)
CGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAG < SRR4302533.4789775/94‑1 (MQ=60)
CGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAG > SRR4302533.5057767/1‑94 (MQ=60)
GTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGA > SRR4302533.478480/1‑94 (MQ=60)
GTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGA > SRR4302533.97756/1‑94 (MQ=60)
TAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGAT > SRR4302533.2539443/1‑94 (MQ=60)
AACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATG > SRR4302533.962917/1‑94 (MQ=60)
AACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATG < SRR4302533.4134054/94‑1 (MQ=60)
AACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATG < SRR4302533.4795880/94‑1 (MQ=60)
CCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGAT > SRR4302533.2274473/1‑94 (MQ=60)
CACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTG > SRR4302533.4320144/1‑94 (MQ=60)
CATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAA < SRR4302533.74679/94‑1 (MQ=60)
CATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAA > SRR4302533.3114375/1‑94 (MQ=60)
TCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAT < SRR4302533.4216520/94‑1 (MQ=60)
CTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATA > SRR4302533.378293/1‑94 (MQ=60)
CTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCATCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATA < SRR4302533.4475065/94‑1 (MQ=60)
CAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGA > SRR4302533.4554349/1‑94 (MQ=60)
CAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGA > SRR4302533.4873272/1‑94 (MQ=60)
CAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGA > SRR4302533.2198042/1‑94 (MQ=60)
AACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAA < SRR4302533.2401286/94‑1 (MQ=60)
AACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAA < SRR4302533.720002/94‑1 (MQ=60)
AACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAA < SRR4302533.3120029/94‑1 (MQ=60)
ACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT < SRR4302533.5140087/94‑1 (MQ=60)
ACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT > SRR4302533.3047228/1‑94 (MQ=60)
ACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT < SRR4302533.6331925/94‑1 (MQ=60)
CATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATC < SRR4302533.3230971/94‑1 (MQ=60)
ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA < SRR4302533.1621908/94‑1 (MQ=60)
ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA > SRR4302533.2343847/1‑94 (MQ=60)
TTATGAACTAATGCCGCCAGCAGAAGCTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC < SRR4302533.3928763/94‑1 (MQ=60)
TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC > SRR4302533.3730669/1‑94 (MQ=60)
TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC < SRR4302533.721548/94‑1 (MQ=60)
TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC < SRR4302533.3954998/94‑1 (MQ=60)
TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC < SRR4302533.4316483/94‑1 (MQ=60)
TATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACG < SRR4302533.2581161/94‑1 (MQ=60)
TATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACG < SRR4302533.5633076/94‑1 (MQ=60)
ATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGC > SRR4302533.2367701/1‑94 (MQ=60)
ATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGC > SRR4302533.1583207/1‑94 (MQ=60)
ATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGC < SRR4302533.5322630/94‑1 (MQ=60)
TGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCG < SRR4302533.4860883/94‑1 (MQ=60)
TGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCG > SRR4302533.2495081/1‑94 (MQ=60)
ACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGC < SRR4302533.4312323/94‑1 (MQ=60)
ACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGC > SRR4302533.2765939/1‑94 (MQ=60)
CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT > SRR4302533.1719906/1‑94 (MQ=60)
TAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG < SRR4302533.1434143/94‑1 (MQ=60)
AATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGG > SRR4302533.3012202/1‑94 (MQ=60)
TGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCA > SRR4302533.2776072/1‑94 (MQ=60)
TGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCA > SRR4302533.5653884/1‑94 (MQ=60)
TGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCA > SRR4302533.1046268/1‑94 (MQ=60)
GCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG < SRR4302533.2311802/94‑1 (MQ=60)
GCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG < SRR4302533.1280299/94‑1 (MQ=60)
GCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG < SRR4302533.5705992/94‑1 (MQ=60)
|
TTGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG > NC_000913/4414374‑4414560
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
