Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,440,519	A→G	E187E (GAA→GAG)	ytfM →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,440,519	0	A	G	100.0%	1473.5 / NA	453	E187E (GAA→GAG)	ytfM	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (204/249); total (204/249)

Only 100 of 467 total aligned reads displayed.

TTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGA  >  NC_000913/4440429‑4440608

ttATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCg                                                                                         >  2:8436142/1‑93 (MQ=255)

ttATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCg                                                                                         <  1:1856897/93‑1 (MQ=255)

 tATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGt                                                                                        <  1:1947412/93‑1 (MQ=255)

  aTTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGtt                                                                                       >  1:7620692/1‑93 (MQ=255)

   tttCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTa                                                                                      <  2:1222013/93‑1 (MQ=255)

   tttCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTa                                                                                      >  2:226342/1‑93 (MQ=255)

     tCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTAcc                                                                                    <  2:549009/93‑1 (MQ=255)

      cGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATCAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCg                                                                                   >  1:6071529/1‑93 (MQ=255)

        aTAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCt                                                                                 >  2:3219375/1‑93 (MQ=255)

         tAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCtt                                                                                <  2:6859765/93‑1 (MQ=255)

          aGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCttt                                                                               >  1:3222616/1‑93 (MQ=255)

           gCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTg                                                                              >  1:1001933/1‑93 (MQ=255)

           gCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTg                                                                              >  2:6796143/1‑93 (MQ=255)

            cGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATGGATTATAACAGTGGCGAGCGTTACCGCTTTgg                                                                             <  1:4369997/93‑1 (MQ=255)

             gAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTggg                                                                            <  2:3825033/93‑1 (MQ=255)

              aaTTTACCAAAGCGCAGCTGGTCATTACGCTCTGCCCGCATAAACCCTGCTCGGATATTGATTATAACAGTGGCGAGCGGTACCGCCTTAGGc                                                                           >  2:4659210/1‑93 (MQ=255)

              aaTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGc                                                                           >  1:2155440/1‑93 (MQ=255)

              aaTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGc                                                                           <  2:947934/93‑1 (MQ=255)

               aTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCa                                                                          <  2:4540725/93‑1 (MQ=255)

               aTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCa                                                                          <  2:8368958/93‑1 (MQ=255)

               aTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCa                                                                          <  1:4244649/93‑1 (MQ=255)

                tttACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAt                                                                         <  1:3443270/93‑1 (MQ=255)

                tttACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAt                                                                         >  2:2360757/1‑93 (MQ=255)

                tttACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAt                                                                         >  1:146233/1‑93 (MQ=255)

                     cAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGAc                                                                    <  1:700145/93‑1 (MQ=255)

                     cAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGAc                                                                    >  1:1057232/1‑93 (MQ=255)

                      aaaGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGAcc                                                                   <  2:2849033/93‑1 (MQ=255)

                       aaGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCt                                                                  <  2:3352249/93‑1 (MQ=255)

                       aaGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCt                                                                  <  1:3587061/93‑1 (MQ=255)

                       aaGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCt                                                                  >  2:1845274/1‑93 (MQ=255)

                        aGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCtt                                                                 >  2:1000439/1‑93 (MQ=255)

                         gcgcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCttt                                                                <  2:8032965/93‑1 (MQ=255)

                         gcgcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCttt                                                                <  1:6249131/93‑1 (MQ=255)

                         gcgcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCttt                                                                <  1:7298799/93‑1 (MQ=255)

                          cgcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTg                                                               <  2:2988312/93‑1 (MQ=255)

                            cAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGaa                                                             <  2:4195078/93‑1 (MQ=255)

                            cAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGaa                                                             <  2:2654897/93‑1 (MQ=255)

                             aGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAg                                                            >  2:5362035/1‑93 (MQ=255)

                             aGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAg                                                            >  2:1613112/1‑93 (MQ=255)

                              gCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAgg                                                           <  1:5681508/93‑1 (MQ=255)

                              gCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAgg                                                           >  1:9198953/1‑93 (MQ=255)

                              gCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTCTGGGCATGTGACCTTTGAAgg                                                           <  2:6448422/93‑1 (MQ=255)

                               cTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGa                                                          <  1:4944993/93‑1 (MQ=255)

                                tGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGAt                                                         <  2:8148915/93‑1 (MQ=255)

                                 gggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATc                                                        <  2:7558665/93‑1 (MQ=255)

                                  ggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATca                                                       <  2:8855550/93‑1 (MQ=255)

                                   gCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATcac                                                      <  2:4273435/93‑1 (MQ=255)

                                    cATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATcaca                                                     <  2:7631130/93‑1 (MQ=255)

                                     aTTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACaa                                                    <  1:1582923/93‑1 (MQ=255)

                                     aTTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACaa                                                    <  2:1355270/93‑1 (MQ=255)

                                       tGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAAt                                                  >  2:8714107/1‑93 (MQ=255)

                                       tGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGAATGTGACCTTTGGAGGATCGCaaac                                                  >  1:2520295/1‑92 (MQ=255)

                                        gcgcTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATc                                                 <  2:2074480/93‑1 (MQ=255)

                                        gcgcTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATc                                                 <  1:5831790/93‑1 (MQ=255)

                                          gcTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcg                                               >  1:9085682/1‑93 (MQ=255)

                                          gcTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcg                                               >  2:5951997/1‑93 (MQ=255)

                                             cgtccTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGa                                            <  2:1430656/90‑1 (MQ=255)

                                             cGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGa                                            <  1:2423094/93‑1 (MQ=255)

                                                ccTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGa                                         <  2:5070945/93‑1 (MQ=255)

                                                 cTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGaa                                        <  2:6027329/93‑1 (MQ=255)

                                                  tGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAt                                       >  1:117776/1‑93 (MQ=255)

                                                   gCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATa                                      >  2:6576899/1‑93 (MQ=255)

                                                    cATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAc                                     <  1:6397544/93‑1 (MQ=255)

                                                     aTAAAGCCTTCTGGGATATTGATTATAACGGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAcc                                    >  1:3518234/1‑93 (MQ=255)

                                                      tAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCt                                   <  1:7733946/93‑1 (MQ=255)

                                                      tAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCt                                   <  1:9897502/93‑1 (MQ=255)

                                                         aGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCa                                >  1:6651022/1‑93 (MQ=255)

                                                         aGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCACTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCa                                <  2:9191234/93‑1 (MQ=255)

                                                          gCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCaa                               <  1:5269001/93‑1 (MQ=255)

                                                            cTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCaaaa                             >  2:3604838/1‑93 (MQ=255)

                                                              tCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATc                           <  1:2938748/93‑1 (MQ=255)

                                                                tGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTg                         <  2:5262764/93‑1 (MQ=255)

                                                                 gggATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTgg                        >  2:5836920/1‑93 (MQ=255)

                                                                  ggATATTGATTATAACAGTGGCGAGCGTTACCGCTGTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGt                       <  1:59407/93‑1 (MQ=255)

                                                                   gATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTg                      <  1:3102251/93‑1 (MQ=255)

                                                                   gATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTg                      >  1:4985510/1‑93 (MQ=255)

                                                                    atatTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGc                     >  1:3816507/1‑93 (MQ=255)

                                                                     tatTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGcc                    >  2:7949046/1‑93 (MQ=255)

                                                                     tatTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGcc                    >  1:6755272/1‑93 (MQ=255)

                                                                     tatTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGcc                    <  2:7678597/93‑1 (MQ=255)

                                                                      atTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCg                   >  1:9448346/1‑93 (MQ=255)

                                                                       ttGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGt                  <  2:4844358/93‑1 (MQ=255)

                                                                        tGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGtt                 <  1:5388860/93‑1 (MQ=255)

                                                                          aTTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTa               <  1:8360079/93‑1 (MQ=255)

                                                                          aTTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTa               >  2:7266942/1‑93 (MQ=255)

                                                                          aTTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTa               <  1:3997165/93‑1 (MQ=255)

                                                                           ttATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTaa              <  2:783108/93‑1 (MQ=255)

                                                                           ttATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTaa              >  1:7862541/1‑93 (MQ=255)

                                                                             ataACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAag            <  1:9774389/93‑1 (MQ=255)

                                                                              taACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAaga           >  1:283748/1‑93 (MQ=255)

                                                                               aaCAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAagag          <  2:4045712/93‑1 (MQ=255)

                                                                                 cAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAggg        <  1:8948759/93‑1 (MQ=255)

                                                                                 cAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAggg        <  1:7418115/93‑1 (MQ=255)

                                                                                 cAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAggg        >  1:450466/1‑93 (MQ=255)

                                                                                 cAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAggg        <  2:6179632/93‑1 (MQ=255)

                                                                                  aGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGc       <  2:2573895/93‑1 (MQ=255)

                                                                                   gTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACATGCAAAATCTGGTGCCGTTTAAAGAGGGCg      >  1:8568559/1‑93 (MQ=255)

                                                                                      gCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATg   >  1:8724982/1‑93 (MQ=255)

                                                                                       cGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGa  <  1:2589554/93‑1 (MQ=255)

                                                                                       cGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGa  <  2:9051826/93‑1 (MQ=255)

TTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGA  >  NC_000913/4440429‑4440608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 246 total aligned reads displayed.

AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGTA  >  NC_000913/4440426‑4440611

AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAG                                                                                              <  SRR4302540.6022269/94‑1 (MQ=60)

AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAG                                                                                              <  SRR4302540.8984299/94‑1 (MQ=60)

AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAG                                                                                              >  SRR4302540.5426518/1‑94 (MQ=60)

 GGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGTGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGC                                                                                             <  SRR4302540.6165554/94‑1 (MQ=60)

  GTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCG                                                                                            >  SRR4302540.9345661/1‑94 (MQ=60)

  GTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCG                                                                                            <  SRR4302540.6494039/94‑1 (MQ=60)

  GTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCG                                                                                            >  SRR4302540.3566685/1‑94 (MQ=60)

  GTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCG                                                                                            <  SRR4302540.5411574/94‑1 (MQ=60)

   TTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGT                                                                                           <  SRR4302540.1877258/94‑1 (MQ=60)

    TATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTT                                                                                          <  SRR4302540.1968608/94‑1 (MQ=60)

    TATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTT                                                                                          >  SRR4302540.7706384/1‑94 (MQ=60)

    TATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTT                                                                                          >  SRR4302540.9175479/1‑94 (MQ=60)

     ATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTA                                                                                         <  SRR4302540.5221264/94‑1 (MQ=60)

     ATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTA                                                                                         >  SRR4302540.7867359/1‑94 (MQ=60)

      TTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTAC                                                                                        <  SRR4302540.10049342/94‑1 (MQ=60)

       TTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACC                                                                                       >  SRR4302540.3917287/1‑94 (MQ=60)

       TTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACC                                                                                       <  SRR4302540.9608194/94‑1 (MQ=60)

        TCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATCAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCG                                                                                      >  SRR4302540.6139031/1‑94 (MQ=60)

         CGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGC                                                                                     <  SRR4302540.8600193/94‑1 (MQ=60)

         CGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGC                                                                                     >  SRR4302540.5484736/1‑94 (MQ=60)

          GATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGGGTTACCGCT                                                                                    >  SRR4302540.1582049/1‑94 (MQ=60)

          GATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCT                                                                                    <  SRR4302540.4089001/94‑1 (MQ=60)

          GATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCT                                                                                    >  SRR4302540.4086729/1‑94 (MQ=60)

          GATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCT                                                                                    >  SRR4302540.2962875/1‑94 (MQ=60)

           ATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTT                                                                                   >  SRR4302540.7470531/1‑94 (MQ=60)

            TAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTT                                                                                  >  SRR4302540.2092011/1‑94 (MQ=60)

            TAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTT                                                                                  <  SRR4302540.3187243/94‑1 (MQ=60)

            TAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTT                                                                                  >  SRR4302540.3257640/1‑94 (MQ=60)

             AGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTG                                                                                 >  SRR4302540.9321960/1‑94 (MQ=60)

               CGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGG                                                                               <  SRR4302540.4417474/94‑1 (MQ=60)

               CGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGG                                                                               <  SRR4302540.132462/94‑1 (MQ=60)

               CGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGG                                                                               <  SRR4302540.2490444/94‑1 (MQ=60)

               CGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATGGATTATAACAGTGGCGAGCGTTACCGCTTTGGG                                                                               <  SRR4302540.4417473/94‑1 (MQ=60)

                GAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGC                                                                              >  SRR4302540.2178636/1‑94 (MQ=60)

                GAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGC                                                                              >  SRR4302540.2612719/1‑94 (MQ=60)

                 AATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCA                                                                             >  SRR4302540.8869524/1‑94 (MQ=60)

                  ATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAT                                                                            <  SRR4302540.6286739/94‑1 (MQ=60)

                  ATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAT                                                                            >  SRR4302540.8794187/1‑94 (MQ=60)

                  ATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAT                                                                            <  SRR4302540.4290832/94‑1 (MQ=60)

                  ATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAT                                                                            <  SRR4302540.4340402/94‑1 (MQ=60)

                  ATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAT                                                                            <  SRR4302540.5416693/94‑1 (MQ=60)

                  ATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAT                                                                            >  SRR4302540.147748/1‑94 (MQ=60)

                  ATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAT                                                                            <  SRR4302540.2305593/94‑1 (MQ=60)

                   TTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATG                                                                           <  SRR4302540.816226/94‑1 (MQ=60)

                   TTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATG                                                                           <  SRR4302540.3480711/94‑1 (MQ=60)

                   TTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATG                                                                           <  SRR4302540.3480710/94‑1 (MQ=60)

                     TACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTG                                                                         >  SRR4302540.3840298/1‑94 (MQ=60)

                     TACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTG                                                                         <  SRR4302540.3601751/94‑1 (MQ=60)

                       CCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGAC                                                                       >  SRR4302540.1067995/1‑94 (MQ=60)

                        CAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACC                                                                      <  SRR4302540.707661/94‑1 (MQ=60)

                        CAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACC                                                                      >  SRR4302540.1904444/1‑94 (MQ=60)

                        CAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACC                                                                      >  SRR4302540.8932793/1‑94 (MQ=60)

                        CAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACC                                                                      <  SRR4302540.3500968/94‑1 (MQ=60)

                         AAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCT                                                                     <  SRR4302540.8563191/94‑1 (MQ=60)

                          AAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTT                                                                    <  SRR4302540.3626237/94‑1 (MQ=60)

                            GCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTG                                                                  <  SRR4302540.5142846/94‑1 (MQ=60)

                            GCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTG                                                                  <  SRR4302540.7380266/94‑1 (MQ=60)

                            GCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTG                                                                  <  SRR4302540.5961724/94‑1 (MQ=60)

                            GCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTG                                                                  <  SRR4302540.7072505/94‑1 (MQ=60)

                            GCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTG                                                                  <  SRR4302540.6318669/94‑1 (MQ=60)

                            GCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTG                                                                  <  SRR4302540.1930236/94‑1 (MQ=60)

                            GCGCAGCTGGGCAGTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTG                                                                  <  SRR4302540.7072504/94‑1 (MQ=60)

                             CGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGA                                                                 >  SRR4302540.6084184/1‑94 (MQ=60)

                             CGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGGGACCTTTGA                                                                 >  SRR4302540.10069767/1‑94 (MQ=60)

                              GCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAA                                                                >  SRR4302540.6825218/1‑94 (MQ=60)

                              GCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAA                                                                <  SRR4302540.8571891/94‑1 (MQ=60)

                               CAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAG                                                               >  SRR4302540.733605/1‑94 (MQ=60)

                               CAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAG                                                               <  SRR4302540.4221758/94‑1 (MQ=60)

                               CAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAG                                                               <  SRR4302540.245315/94‑1 (MQ=60)

                                AGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGG                                                              >  SRR4302540.9309303/1‑94 (MQ=60)

                                AGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGAGACCTTTGAAGG                                                              >  SRR4302540.7735725/1‑94 (MQ=60)

                                 GCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGA                                                             <  SRR4302540.7694418/94‑1 (MQ=60)

                                 GCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGA                                                             <  SRR4302540.5744054/94‑1 (MQ=60)

                                 GCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGA                                                             <  SRR4302540.9264903/94‑1 (MQ=60)

                                  CTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGAT                                                            >  SRR4302540.9894616/1‑94 (MQ=60)

                                   TGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATC                                                           >  SRR4302540.6942463/1‑94 (MQ=60)

                                   TGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATC                                                           <  SRR4302540.3041999/94‑1 (MQ=60)

                                    GGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCA                                                          <  SRR4302540.5659266/94‑1 (MQ=60)

                                    GGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCA                                                          <  SRR4302540.2888221/94‑1 (MQ=60)

                                      GCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACA                                                        >  SRR4302540.2924350/1‑94 (MQ=60)

                                      GCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACA                                                        <  SRR4302540.880546/94‑1 (MQ=60)

                                      GCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACA                                                        <  SRR4302540.177669/94‑1 (MQ=60)

                                       CATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAA                                                       >  SRR4302540.2565436/1‑94 (MQ=60)

                                        ATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAA                                                      <  SRR4302540.1600215/94‑1 (MQ=60)

                                        ATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAA                                                      >  SRR4302540.281170/1‑94 (MQ=60)

                                        ATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAA                                                      <  SRR4302540.7927867/94‑1 (MQ=60)

                                        ATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAA                                                      >  SRR4302540.9579925/1‑94 (MQ=60)

                                         TTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAAT                                                     <  SRR4302540.1753811/94‑1 (MQ=60)

                                           GCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCC                                                   <  SRR4302540.3204443/94‑1 (MQ=60)

                                           GCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCC                                                   <  SRR4302540.5896268/94‑1 (MQ=60)

                                            CGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCG                                                  >  SRR4302540.9194837/1‑94 (MQ=60)

                                              CTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCG                                                >  SRR4302540.5005331/1‑94 (MQ=60)

                                                CGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGAT                                              <  SRR4302540.2449200/94‑1 (MQ=60)

                                                CGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGAT                                              <  SRR4302540.280889/94‑1 (MQ=60)

                                                CGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGAT                                              <  SRR4302540.280888/94‑1 (MQ=60)

                                                CGGCCTGCATAAAGCCTTCTGAGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGAT                                              <  SRR4302540.9409016/94‑1 (MQ=60)

                                                 GGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATG                                             >  SRR4302540.1134831/1‑94 (MQ=60)

                                                 GGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATG                                             <  SRR4302540.3528190/94‑1 (MQ=60)

                                                 GGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATG                                             >  SRR4302540.2070613/1‑94 (MQ=60)

                                                  GCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGA                                            <  SRR4302540.644162/94‑1 (MQ=60)

                                                   CCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAA                                           <  SRR4302540.4963848/94‑1 (MQ=60)

                                                   CCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAA                                           >  SRR4302540.5952638/1‑94 (MQ=60)

                                                    CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGACT                                          >  SRR4302540.3678782/1‑94 (MQ=60)

                                                    CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAT                                          <  SRR4302540.5819876/94‑1 (MQ=60)

                                                    CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAT                                          >  SRR4302540.7950652/1‑94 (MQ=60)

                                                    CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAT                                          >  SRR4302540.7591902/1‑94 (MQ=60)

                                                    CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAT                                          >  SRR4302540.6751499/1‑94 (MQ=60)

                                                    CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAT                                          >  SRR4302540.119045/1‑94 (MQ=60)

                                                     TGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATA                                         <  SRR4302540.2251698/94‑1 (MQ=60)

                                                     TGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATA                                         >  SRR4302540.431522/1‑94 (MQ=60)

                                                     TGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATA                                         >  SRR4302540.2477336/1‑94 (MQ=60)

                                                      GCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAC                                        <  SRR4302540.580394/94‑1 (MQ=60)

                                                       CATAAAGCCTTCTGGGATATTGATTATAACGGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACC                                       >  SRR4302540.3556564/1‑94 (MQ=60)

                                                       CATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACC                                       <  SRR4302540.9243002/94‑1 (MQ=60)

                                                       CATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACC                                       <  SRR4302540.3585452/94‑1 (MQ=60)

                                                       CATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACC                                       <  SRR4302540.6468766/94‑1 (MQ=60)

                                                        ATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCT                                      <  SRR4302540.1132284/94‑1 (MQ=60)

                                                        ATAAAGCCTTCTGCGATATTTATTATAACAGTGGCGAGCGTTACCGCTTTTGGCATGTGACCTTTGACGGATCACAAATCCGCGATGAATACCT                                      <  SRR4302540.1132286/94‑1 (MQ=60)

                                                         TAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTG                                     >  SRR4302540.10111103/1‑94 (MQ=60)

                                                         TAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTG                                     <  SRR4302540.7824232/94‑1 (MQ=60)

                                                         TAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTG                                     <  SRR4302540.10013102/94‑1 (MQ=60)

                                                          AAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGC                                    >  SRR4302540.4988048/1‑94 (MQ=60)

                                                          AAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGC                                    >  SRR4302540.5910367/1‑94 (MQ=60)

                                                           AAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCA                                   >  SRR4302540.6724592/1‑94 (MQ=60)

                                                            AGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAA                                  >  SRR4302540.6435624/1‑94 (MQ=60)

                                                             GCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAA                                 <  SRR4302540.5326516/94‑1 (MQ=60)

                                                              CCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAA                                >  SRR4302540.6278826/1‑94 (MQ=60)

                                                              CCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAA                                >  SRR4302540.5282490/1‑94 (MQ=60)

                                                               CTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAAT                               <  SRR4302540.1174614/94‑1 (MQ=60)

                                                               CTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAAT                               >  SRR4302540.4512704/1‑94 (MQ=60)

                                                                TTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGGAGGATCACAAATCCGCGATGAATACCTGCAAAATC                              >  SRR4302540.8044677/1‑94 (MQ=60)

                                                                TTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATC                              <  SRR4302540.5697088/94‑1 (MQ=60)

                                                                TTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATC                              <  SRR4302540.10087155/94‑1 (MQ=60)

                                                                TTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATC                              >  SRR4302540.541006/1‑94 (MQ=60)

                                                                 TCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCT                             <  SRR4302540.2971004/94‑1 (MQ=60)

                                                                  CTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTG                            >  SRR4302540.2457881/1‑94 (MQ=60)

                                                                   TGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGG                           <  SRR4302540.282189/94‑1 (MQ=60)

                                                                    GGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGT                          <  SRR4302540.5454844/94‑1 (MQ=60)

                                                                    GGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGT                          <  SRR4302540.9120113/94‑1 (MQ=60)

                                                                    GGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGT                          <  SRR4302540.3384025/94‑1 (MQ=60)

                                                                     GGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTG                         <  SRR4302540.1659482/94‑1 (MQ=60)

                                                                     GGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTG                         <  SRR4302540.9920762/94‑1 (MQ=60)

                                                                     GGATATTGATTATAACAGTGGCGAGCGTTACCGCTGTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTG                         <  SRR4302540.60007/94‑1 (MQ=60)

                                                                      GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC                        <  SRR4302540.5339165/94‑1 (MQ=60)

                                                                      GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC                        <  SRR4302540.3136225/94‑1 (MQ=60)

                                                                      GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC                        >  SRR4302540.3858059/1‑94 (MQ=60)

                                                                      GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC                        <  SRR4302540.1939600/94‑1 (MQ=60)

                                                                      GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC                        <  SRR4302540.7755322/94‑1 (MQ=60)

                                                                      GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC                        >  SRR4302540.1583976/1‑94 (MQ=60)

                                                                      GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC                        <  SRR4302540.6135649/94‑1 (MQ=60)

                                                                       ATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCC                       >  SRR4302540.6829913/1‑94 (MQ=60)

                                                                       ATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCC                       <  SRR4302540.767495/94‑1 (MQ=60)

                                                                        TATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCG                      >  SRR4302540.9560506/1‑94 (MQ=60)

                                                                         ATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGT                     >  SRR4302540.3182670/1‑94 (MQ=60)

                                                                         ATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGT                     <  SRR4302540.7709732/94‑1 (MQ=60)

                                                                         ATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGT                     >  SRR4302540.4643072/1‑94 (MQ=60)

                                                                         ATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCAGCGATGAATACCTGCAAAATATGGTGCGGT                     >  SRR4302540.2438618/1‑94 (MQ=60)

                                                                          TTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTT                    <  SRR4302540.6670185/94‑1 (MQ=60)

                                                                           TGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTT                   >  SRR4302540.6586712/1‑94 (MQ=60)

                                                                             ATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAA                 >  SRR4302540.4340571/1‑94 (MQ=60)

                                                                             ATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAA                 <  SRR4302540.9139691/94‑1 (MQ=60)

                                                                             ATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAA                 <  SRR4302540.4040188/94‑1 (MQ=60)

                                                                             ATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAA                 <  SRR4302540.8457093/94‑1 (MQ=60)

                                                                             ATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAA                 >  SRR4302540.8075575/1‑94 (MQ=60)

                                                                             ATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAA                 >  SRR4302540.7954402/1‑94 (MQ=60)

                                                                              TTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAA                <  SRR4302540.3393358/94‑1 (MQ=60)

                                                                               TATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAG               <  SRR4302540.3635463/94‑1 (MQ=60)

                                                                                ATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGA              <  SRR4302540.9888972/94‑1 (MQ=60)

                                                                                ATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGA              >  SRR4302540.1352441/1‑94 (MQ=60)

                                                                                ATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGA              <  SRR4302540.2890959/94‑1 (MQ=60)

                                                                                ATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGA              <  SRR4302540.8723488/94‑1 (MQ=60)

                                                                                  AACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGG            <  SRR4302540.3082689/94‑1 (MQ=60)

                                                                                  AACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGG            >  SRR4302540.1046696/1‑94 (MQ=60)

                                                                                  AACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGG            >  SRR4302540.1046402/1‑94 (MQ=60)

                                                                                   ACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGG           >  SRR4302540.455265/1‑94 (MQ=60)

                                                                                    CAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGC          <  SRR4302540.2554032/94‑1 (MQ=60)

                                                                                    CAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGC          <  SRR4302540.10139758/94‑1 (MQ=60)

                                                                                    CAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGC          <  SRR4302540.7500741/94‑1 (MQ=60)

                                                                                    CAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGC          <  SRR4302540.9054138/94‑1 (MQ=60)

                                                                                    CAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGC          <  SRR4302540.9043787/94‑1 (MQ=60)

                                                                                     AGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCG         <  SRR4302540.6132214/94‑1 (MQ=60)

                                                                                     AGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCG         >  SRR4302540.4501025/1‑94 (MQ=60)

                                                                                     AGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACATGCAAAATCTGGTGCCGTTTAAAGAGGGCG         >  SRR4302540.8668078/1‑94 (MQ=60)

                                                                                      GTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGA        >  SRR4302540.6626013/1‑94 (MQ=60)

                                                                                       TGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGAT       <  SRR4302540.7307323/94‑1 (MQ=60)

                                                                                        GGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATG      >  SRR4302540.8826300/1‑94 (MQ=60)

                                                                                        GGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATG      <  SRR4302540.722652/94‑1 (MQ=60)

                                                                                        GGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATG      <  SRR4302540.7416554/94‑1 (MQ=60)

                                                                                         GCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCCAAATCTGGTGCCGTTTAAAGAGGGCGATGA     >  SRR4302540.5028412/1‑94 (MQ=60)

                                                                                         GCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGG     >  SRR4302540.5028411/1‑94 (MQ=60)

                                                                                         GCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGA     >  SRR4302540.636076/1‑94 (MQ=60)

                                                                                         GCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGA     >  SRR4302540.5028410/1‑94 (MQ=60)

                                                                                          CGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAG    <  SRR4302540.4008680/94‑1 (MQ=60)

                                                                                          CGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAG    <  SRR4302540.1392157/94‑1 (MQ=60)

                                                                                          CGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAG    <  SRR4302540.9585068/94‑1 (MQ=60)

                                                                                          CGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAG    <  SRR4302540.2617470/94‑1 (MQ=60)

                                                                                           GAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGT   >  SRR4302540.498841/1‑94 (MQ=60)

                                                                                           GAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGT   >  SRR4302540.3013055/1‑94 (MQ=60)

                                                                                           GAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGA   >  SRR4302540.6582827/1‑94 (MQ=60)

                                                                                            AGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGTA  <  SRR4302540.3917681/94‑1 (MQ=60)

AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGTA  >  NC_000913/4440426‑4440611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`