Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,440,519 |
A→G |
E187E (GAA→GAG) |
ytfM → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,440,519 | 0 | A | G | 100.0%
| 743.8
/ NA
| 230 | E187E (GAA→GAG) | ytfM | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (105/125); total (105/125) |
Only 100 of 234 total aligned reads displayed.
TTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGA > NC_000913/4440429‑4440608
|
ttATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCg > 1:716867/1‑93 (MQ=255)
aTTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGtt < 1:1945052/93‑1 (MQ=255)
tCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTAcc > 2:3081693/1‑93 (MQ=255)
tAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCtt > 2:5635773/1‑93 (MQ=255)
aGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCttt < 2:552153/93‑1 (MQ=255)
aGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCttt < 2:3587998/93‑1 (MQ=255)
gCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTg > 2:1991025/1‑93 (MQ=255)
gCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTg > 2:120517/1‑93 (MQ=255)
gAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTggg > 1:5661259/1‑93 (MQ=255)
gAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTggg > 2:2175951/1‑93 (MQ=255)
aaTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGc > 1:1087957/1‑93 (MQ=255)
aaTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGc < 1:2688862/93‑1 (MQ=255)
aTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCa < 2:1610897/93‑1 (MQ=255)
aTTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCa > 1:4866928/1‑93 (MQ=255)
tttACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAt < 1:5574217/93‑1 (MQ=255)
ttACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAtg < 2:550057/93‑1 (MQ=255)
ttACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAtg < 1:5930298/93‑1 (MQ=255)
aCCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAtgtg < 1:6290374/93‑1 (MQ=255)
aCCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCAtgtg > 1:4786584/1‑93 (MQ=255)
ccAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGa < 2:2139723/93‑1 (MQ=255)
aaaGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGAcc > 2:1082315/1‑93 (MQ=255)
aaGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCt < 2:5281224/93‑1 (MQ=255)
aaGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCt > 1:2062125/1‑93 (MQ=255)
aaGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCt > 1:4613995/1‑93 (MQ=255)
aGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCtt < 1:6173536/93‑1 (MQ=255)
aGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCtt > 1:4026334/1‑93 (MQ=255)
gcgcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCttt < 2:356218/93‑1 (MQ=255)
gcgcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCttt > 2:4689336/1‑93 (MQ=255)
gcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGa > 2:1250082/1‑93 (MQ=255)
gcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGa < 1:2660802/93‑1 (MQ=255)
gcAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGa > 2:859195/1‑93 (MQ=255)
cAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGaa > 1:2531692/1‑93 (MQ=255)
cAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGaa < 2:4925541/93‑1 (MQ=255)
cAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGaa < 2:2355790/93‑1 (MQ=255)
aGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAg < 2:1505128/93‑1 (MQ=255)
gCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAgg > 1:4663771/1‑93 (MQ=255)
gCTGGGCAATGCGCTCGGCTTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAgg > 2:6165030/1‑93 (MQ=255)
gggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATc > 2:4754775/1‑93 (MQ=255)
gggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATc < 2:3936650/93‑1 (MQ=255)
gggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATc < 1:1481970/93‑1 (MQ=255)
gggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATc < 2:2701514/93‑1 (MQ=255)
gggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATc < 2:5798508/93‑1 (MQ=255)
ggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATca < 2:1718007/93‑1 (MQ=255)
ggCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATca < 2:2272277/93‑1 (MQ=255)
gCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATcac < 1:1580163/93‑1 (MQ=255)
cATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATcaca < 2:3695296/93‑1 (MQ=255)
ttGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACaaa < 1:3528330/93‑1 (MQ=255)
tGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAAt < 2:587091/93‑1 (MQ=255)
cTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcgc > 1:1714874/1‑93 (MQ=255)
tCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcgcg > 1:5960900/1‑93 (MQ=255)
tCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcgcg > 1:575486/1‑93 (MQ=255)
ggCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGAt > 1:3928365/1‑93 (MQ=255)
cTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGaa > 1:3034130/1‑93 (MQ=255)
cTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGaa < 2:4653070/93‑1 (MQ=255)
tGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAt > 1:2122086/1‑93 (MQ=255)
tGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAt > 1:704193/1‑93 (MQ=255)
tGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAt < 2:588487/93‑1 (MQ=255)
gCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATa > 2:1864334/1‑93 (MQ=255)
gCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATa < 2:5301121/93‑1 (MQ=255)
cATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAc < 2:4547692/93‑1 (MQ=255)
cATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAc < 1:5046835/93‑1 (MQ=255)
aTAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAcc < 1:1059010/93‑1 (MQ=255)
aTAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAcc < 1:5314812/93‑1 (MQ=255)
aTAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAcc < 2:3197791/93‑1 (MQ=255)
tAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCt > 2:482467/1‑93 (MQ=255)
aaaGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTg > 1:3755367/1‑93 (MQ=255)
aaaGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTg > 1:931925/1‑93 (MQ=255)
cTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCaaaa > 1:4526463/1‑93 (MQ=255)
ttCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAAt > 2:3393815/1‑93 (MQ=255)
tCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATc > 2:2499704/1‑93 (MQ=255)
tCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATc < 2:5715440/93‑1 (MQ=255)
tGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTg < 1:1109226/93‑1 (MQ=255)
tGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTg < 2:4219334/93‑1 (MQ=255)
tGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTg > 1:2970953/1‑93 (MQ=255)
tGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTg > 2:4087322/1‑93 (MQ=255)
gggATATTGATTATAACAGTGGCGAGCGTTACCGCTTTTGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTgg > 2:2680053/1‑93 (MQ=255)
gggATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTgg < 2:733095/93‑1 (MQ=255)
gggATATTGATTACAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGGCAAATCTgg < 2:6151668/93‑1 (MQ=255)
ggATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGt > 1:793666/1‑93 (MQ=255)
atatTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGc > 1:491359/1‑93 (MQ=255)
atatTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGc < 1:3302760/93‑1 (MQ=255)
atatTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGc > 1:3813598/1‑93 (MQ=255)
ttGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGt > 2:2816726/1‑93 (MQ=255)
aTTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTa > 1:2882685/1‑93 (MQ=255)
tataACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTaaa < 2:4132683/93‑1 (MQ=255)
ataACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGGGCCGTTTAAag < 1:5797683/93‑1 (MQ=255)
taACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAaga < 1:3412272/93‑1 (MQ=255)
aaCAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAagag < 1:1669841/93‑1 (MQ=255)
aaCAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAagag < 2:4052048/93‑1 (MQ=255)
aaCAGTGGCGAGCGTGACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAagag < 1:1285646/93‑1 (MQ=255)
cAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAggg < 2:2031783/93‑1 (MQ=255)
cAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAggg < 1:4159629/93‑1 (MQ=255)
aGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAgggg > 1:3765445/1‑92 (MQ=255)
gTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCg > 2:508625/1‑93 (MQ=255)
tGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGa < 2:1033662/93‑1 (MQ=255)
tGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGa > 1:4291024/1‑93 (MQ=255)
ggCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGAt < 2:5994406/93‑1 (MQ=255)
ggCGAGCGTGACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGAt < 2:2578995/93‑1 (MQ=255)
gCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATg < 1:1125216/93‑1 (MQ=255)
cGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGa < 1:4446677/93‑1 (MQ=255)
|
TTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGA > NC_000913/4440429‑4440608
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGTAC > NC_000913/4440426‑4440612
|
AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAG < SRR4302533.2637825/94‑1 (MQ=60)
AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAG > SRR4302533.5606415/1‑94 (MQ=60)
GTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCG < SRR4302533.1951802/94‑1 (MQ=60)
GTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCG < SRR4302533.265618/94‑1 (MQ=60)
GTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCG > SRR4302533.721093/1‑94 (MQ=60)
TTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGT > SRR4302533.284427/1‑94 (MQ=60)
TATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTT > SRR4302533.843300/1‑94 (MQ=60)
ATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTA < SRR4302533.1956915/94‑1 (MQ=60)
ATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTA > SRR4302533.326356/1‑94 (MQ=60)
TTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTAC < SRR4302533.3489101/94‑1 (MQ=60)
TTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACC < SRR4302533.5286770/94‑1 (MQ=60)
TTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACC < SRR4302533.2081288/94‑1 (MQ=60)
GATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCT < SRR4302533.139601/94‑1 (MQ=60)
ATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTT > SRR4302533.122752/1‑94 (MQ=60)
ATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTT > SRR4302533.162189/1‑94 (MQ=60)
CGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGG > SRR4302533.5695462/1‑94 (MQ=60)
GAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGC > SRR4302533.1094365/1‑94 (MQ=60)
AATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCA < SRR4302533.2705347/94‑1 (MQ=60)
AATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCA > SRR4302533.4896420/1‑94 (MQ=60)
AATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCA > SRR4302533.1688680/1‑94 (MQ=60)
TTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATG < SRR4302533.5607905/94‑1 (MQ=60)
TTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGT < SRR4302533.5966149/94‑1 (MQ=60)
TACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTG > SRR4302533.4815572/1‑94 (MQ=60)
TACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTG > SRR4302533.999193/1‑94 (MQ=60)
ACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGA < SRR4302533.6327887/94‑1 (MQ=60)
CCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGAC > SRR4302533.4605580/1‑94 (MQ=60)
CCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGAC < SRR4302533.5712604/94‑1 (MQ=60)
CCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGAC > SRR4302533.448939/1‑94 (MQ=60)
AAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCT > SRR4302533.2074842/1‑94 (MQ=60)
AAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCT < SRR4302533.1851341/94‑1 (MQ=60)
AAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCT > SRR4302533.4641944/1‑94 (MQ=60)
AAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCT > SRR4302533.5665670/1‑94 (MQ=60)
AAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTT < SRR4302533.5986368/94‑1 (MQ=60)
AAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTT > SRR4302533.4050844/1‑94 (MQ=60)
AAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTT < SRR4302533.4223088/94‑1 (MQ=60)
AGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTT < SRR4302533.6210634/94‑1 (MQ=60)
AGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTT < SRR4302533.848709/94‑1 (MQ=60)
GCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAA < SRR4302533.2677140/94‑1 (MQ=60)
GCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAA > SRR4302533.3170379/1‑94 (MQ=60)
GCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAA > SRR4302533.2547277/1‑94 (MQ=60)
AGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGG > SRR4302533.4692028/1‑94 (MQ=60)
AGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGG > SRR4302533.3833289/1‑94 (MQ=60)
GCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGA < SRR4302533.1577169/94‑1 (MQ=60)
TGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATC > SRR4302533.1579524/1‑94 (MQ=60)
GGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCA < SRR4302533.1490917/94‑1 (MQ=60)
GGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCAC < SRR4302533.2197273/94‑1 (MQ=60)
GCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACA < SRR4302533.1589681/94‑1 (MQ=60)
CATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAA < SRR4302533.1107725/94‑1 (MQ=60)
ATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAA > SRR4302533.3786129/1‑94 (MQ=60)
ATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAA > SRR4302533.693288/1‑94 (MQ=60)
TTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAAT > SRR4302533.742836/1‑94 (MQ=60)
TTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAAT < SRR4302533.5014132/94‑1 (MQ=60)
TTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAAT < SRR4302533.3550077/94‑1 (MQ=60)
CGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCG > SRR4302533.3943794/1‑94 (MQ=60)
GCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGC > SRR4302533.1725273/1‑94 (MQ=60)
CTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCG > SRR4302533.578882/1‑94 (MQ=60)
CTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCG > SRR4302533.5996961/1‑94 (MQ=60)
TCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGA < SRR4302533.1125893/94‑1 (MQ=60)
CGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGAT > SRR4302533.5795237/1‑94 (MQ=60)
CGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGAT > SRR4302533.3952351/1‑94 (MQ=60)
GGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATG < SRR4302533.4291132/94‑1 (MQ=60)
GCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGA > SRR4302533.4011382/1‑94 (MQ=60)
CCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAA < SRR4302533.1916568/94‑1 (MQ=60)
CCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAA > SRR4302533.3052695/1‑94 (MQ=60)
CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAT > SRR4302533.1089784/1‑94 (MQ=60)
CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAT > SRR4302533.708354/1‑94 (MQ=60)
CTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAT > SRR4302533.2135167/1‑94 (MQ=60)
TGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATA > SRR4302533.2833727/1‑94 (MQ=60)
TGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATA > SRR4302533.3666278/1‑94 (MQ=60)
GCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAC > SRR4302533.4663506/1‑94 (MQ=60)
CATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACC > SRR4302533.6312028/1‑94 (MQ=60)
CATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACC < SRR4302533.5077364/94‑1 (MQ=60)
ATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCT < SRR4302533.1065237/94‑1 (MQ=60)
ATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCT < SRR4302533.5346661/94‑1 (MQ=60)
ATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCT > SRR4302533.4812441/1‑94 (MQ=60)
TAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTG > SRR4302533.937395/1‑94 (MQ=60)
TAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTG > SRR4302533.713936/1‑94 (MQ=60)
TAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTG > SRR4302533.2535606/1‑94 (MQ=60)
TAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTG > SRR4302533.3778383/1‑94 (MQ=60)
AAAGCCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGC < SRR4302533.5453132/94‑1 (MQ=60)
CCTTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAA > SRR4302533.4553868/1‑94 (MQ=60)
TTCTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATC > SRR4302533.5295766/1‑94 (MQ=60)
CTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTG > SRR4302533.574282/1‑94 (MQ=60)
CTGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTG > SRR4302533.2989121/1‑94 (MQ=60)
TGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGG > SRR4302533.1130574/1‑94 (MQ=60)
TGGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGG < SRR4302533.1115810/94‑1 (MQ=60)
GGGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGT > SRR4302533.798337/1‑94 (MQ=60)
GGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTG < SRR4302533.4401781/94‑1 (MQ=60)
GGATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTG < SRR4302533.3868464/94‑1 (MQ=60)
GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC > SRR4302533.494295/1‑94 (MQ=60)
GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC < SRR4302533.4903201/94‑1 (MQ=60)
GATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGC > SRR4302533.3836920/1‑94 (MQ=60)
ATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCC > SRR4302533.2678093/1‑94 (MQ=60)
ATATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCC < SRR4302533.3323154/94‑1 (MQ=60)
ATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGT < SRR4302533.4820912/94‑1 (MQ=60)
ATTGATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGT < SRR4302533.598352/94‑1 (MQ=60)
GATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTA > SRR4302533.3669370/1‑94 (MQ=60)
GATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTA > SRR4302533.2900417/1‑94 (MQ=60)
GATTATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTA > SRR4302533.2947251/1‑94 (MQ=60)
TATAAGAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAG < SRR4302533.6053853/94‑1 (MQ=60)
TATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAG < SRR4302533.694676/94‑1 (MQ=60)
TATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAG < SRR4302533.58382/94‑1 (MQ=60)
ATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGA < SRR4302533.4593541/94‑1 (MQ=60)
ATAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGGGCCGTTTAAAGA < SRR4302533.5832709/94‑1 (MQ=60)
TAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAG < SRR4302533.3433347/94‑1 (MQ=60)
TAACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAG < SRR4302533.4158581/94‑1 (MQ=60)
AACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGG < SRR4302533.1679930/94‑1 (MQ=60)
AACAGTGGCGAGCGTGACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGG < SRR4302533.1293378/94‑1 (MQ=60)
ACAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGG < SRR4302533.3011717/94‑1 (MQ=60)
CAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGG > SRR4302533.3788529/1‑94 (MQ=60)
CAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGC > SRR4302533.4823770/1‑94 (MQ=60)
CAGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGC < SRR4302533.4184838/94‑1 (MQ=60)
AGTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCG > SRR4302533.26219/1‑94 (MQ=60)
GTGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGA > SRR4302533.4316830/1‑94 (MQ=60)
TGGCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGAT < SRR4302533.2037082/94‑1 (MQ=60)
GCGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGA < SRR4302533.1131894/94‑1 (MQ=60)
CGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAG > SRR4302533.1656520/1‑94 (MQ=60)
CGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAG > SRR4302533.1830403/1‑94 (MQ=60)
CGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAG < SRR4302533.4473571/94‑1 (MQ=60)
CGAGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAG < SRR4302533.3349950/94‑1 (MQ=60)
AGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGCGGGCGATGAGTA > SRR4302533.5268788/1‑94 (MQ=60)
AGCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGTGATGAGTA > SRR4302533.791714/1‑94 (MQ=60)
GCGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGTAC < SRR4302533.5642588/94‑1 (MQ=60)
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AGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGTAC > NC_000913/4440426‑4440612
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
