Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,444,690	T→C	V1001A (GTA→GCA)	ytfN →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,444,690	0	T	C	100.0%	965.9 / NA	301	V1001A (GTA→GCA)	ytfN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/167); total (134/167)

Only 100 of 318 total aligned reads displayed.

TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA  >  NC_000913/4444600‑4444779

tCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGcagcag                                                                                         <  2:4045845/93‑1 (MQ=255)

 cGAGGCTACACCAACCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAgg                                                                                        <  1:1995600/93‑1 (MQ=255)

  gAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGc                                                                                       >  1:589836/1‑93 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      >  2:411539/1‑93 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      <  2:9129675/93‑1 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      >  2:3174722/1‑93 (MQ=255)

    ggCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGt                                                                                     >  1:4579741/1‑93 (MQ=255)

     gCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtc                                                                                    <  2:4492303/93‑1 (MQ=255)

       tACACCAACCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc                                                                                  <  2:359952/93‑1 (MQ=255)

       tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc                                                                                  <  1:5286462/93‑1 (MQ=255)

        acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc                                                                                 >  1:5960057/1‑93 (MQ=255)

         cacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCa                                                                                >  2:3465928/1‑93 (MQ=255)

         cacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCa                                                                                <  2:322594/93‑1 (MQ=255)

          cccAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg                                                                               <  2:8849462/92‑1 (MQ=255)

           ccAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGc                                                                              >  1:7961022/1‑93 (MQ=255)

           ccAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGc                                                                              >  2:7628014/1‑93 (MQ=255)

            cAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCg                                                                             >  1:5038036/1‑93 (MQ=255)

             aaaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGa                                                                            >  2:1547703/1‑93 (MQ=255)

              aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt                                                                           <  1:2586154/93‑1 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          >  2:3099765/1‑93 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          <  2:5091368/93‑1 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          <  2:5557910/93‑1 (MQ=255)

                 cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgtg                                                                        <  1:1278950/93‑1 (MQ=255)

                 cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgtg                                                                        >  2:8744679/1‑93 (MQ=255)

                 cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATATGCCGGAAAGCGCAGCAGGCGACTTCAACGAtgtg                                                                        >  2:8879013/1‑93 (MQ=255)

                  tGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtgg                                                                       <  1:4913271/93‑1 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      >  2:6742539/1‑93 (MQ=255)

                    tttACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggtg                                                                     <  2:3821896/93‑1 (MQ=255)

                     tttcccTCGATGGTCGCGTGGATGTCCCTTGGTCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa                                                                    <  1:2565058/90‑1 (MQ=255)

                     ttgcccTCGATGGGCGCGTGGATGTCCCTTGGGCGCGCAGCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa                                                                    <  2:8539675/90‑1 (MQ=255)

                     ttACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa                                                                    <  2:4601038/93‑1 (MQ=255)

                       aCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATg                                                                  >  1:3077361/1‑93 (MQ=255)

                       aCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATg                                                                  >  1:7716787/1‑93 (MQ=255)

                            cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa                                                             <  1:477925/93‑1 (MQ=255)

                             gATGGTCCCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAc                                                            <  1:219977/93‑1 (MQ=255)

                               tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa                                                          <  1:2804056/93‑1 (MQ=255)

                               tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa                                                          <  1:2422100/93‑1 (MQ=255)

                                 gTCGTGTGTATGTCCCTTGGGCGCGCATCGTGGTGCATGATCTGCCGGAATGCGCATCAGGCGTCTCCAGCGATGTGGTGATGCGTAACGATa                                                        >  2:8934124/1‑93 (MQ=255)

                                 gTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATa                                                        <  1:8803352/93‑1 (MQ=255)

                                  gcgcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATaa                                                       <  1:732500/92‑1 (MQ=255)

                                    ggctGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGACAAcc                                                     <  2:8146139/90‑1 (MQ=255)

                                    gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc                                                     <  1:9981101/93‑1 (MQ=255)

                                    gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc                                                     <  1:3533507/93‑1 (MQ=255)

                                     cgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCt                                                    <  2:2467515/93‑1 (MQ=255)

                                      gTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTg                                                   >  1:5646376/1‑93 (MQ=255)

                                        tcaTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCa                                                 <  2:206175/91‑1 (MQ=255)

                                         gATGTCCCTTGGGCACGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCaa                                                >  1:7450754/1‑93 (MQ=255)

                                          aTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAc                                               <  2:9289177/93‑1 (MQ=255)

                                           tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc                                              <  1:1047863/93‑1 (MQ=255)

                                           tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc                                              <  2:2189826/93‑1 (MQ=255)

                                            gTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCg                                             >  2:148476/1‑93 (MQ=255)

                                             tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCgg                                            >  1:1564649/1‑93 (MQ=255)

                                             tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCga                                            >  1:6900022/1‑92 (MQ=255)

                                               ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa                                          <  1:5480408/93‑1 (MQ=255)

                                               ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGaa                                          <  2:5981129/93‑1 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         >  1:9199935/1‑93 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         >  2:9444542/1‑93 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         <  2:6093810/93‑1 (MQ=255)

                                                 ctGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAaga                                        <  2:9819515/92‑1 (MQ=255)

                                                   gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc                                      <  1:6978605/93‑1 (MQ=255)

                                                       gcgcATCGTGGGGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaa                                  >  2:5863718/1‑93 (MQ=255)

                                                          cATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc                               >  1:6516919/1‑93 (MQ=255)

                                                          cATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc                               <  2:9526181/93‑1 (MQ=255)

                                                          cATCGTGGGGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc                               <  1:8600698/93‑1 (MQ=255)

                                                           aTCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACg                              <  2:6989501/93‑1 (MQ=255)

                                                           aTCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACg                              >  1:1919552/1‑93 (MQ=255)

                                                            tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg                             >  1:8868686/1‑93 (MQ=255)

                                                            tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg                             <  1:3814890/93‑1 (MQ=255)

                                                            tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg                             >  1:2298723/1‑93 (MQ=255)

                                                               tggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGt                          >  1:2087335/1‑93 (MQ=255)

                                                               tggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGt                          <  2:3269430/93‑1 (MQ=255)

                                                                ggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTc                         >  1:7214085/1‑93 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa                       <  1:964935/93‑1 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa                       >  2:2941047/1‑93 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa                       <  1:1784122/93‑1 (MQ=255)

                                                                  tgCACGATCTGCCGAAAAGCGCAGCAGGCGTCTCCAGCGATGTGTTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAACCGGCGTCGa                       <  1:1110667/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTTGAt                      <  2:5312279/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt                      <  1:609503/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt                      <  1:8183710/93‑1 (MQ=255)

                                                                     aCGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGTCGATTc                    <  2:6538889/93‑1 (MQ=255)

                                                                        aTCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCgt                 >  1:5525732/1‑92 (MQ=255)

                                                                        aTCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCgc                 >  2:1905751/1‑92 (MQ=255)

                                                                         tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt                >  2:4826068/1‑93 (MQ=255)

                                                                         tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt                >  1:3387668/1‑93 (MQ=255)

                                                                           tGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTa              <  2:7201283/93‑1 (MQ=255)

                                                                            gCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTCCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTaa             <  1:3960329/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           <  1:9713974/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           <  2:112724/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           >  1:9286943/1‑93 (MQ=255)

                                                                               ggAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAg          >  1:9089629/1‑93 (MQ=255)

                                                                               ggAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAg          <  1:2941047/93‑1 (MQ=255)

                                                                                 aaaGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTa        <  2:479287/93‑1 (MQ=255)

                                                                                  aaGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTaa       >  1:359158/1‑93 (MQ=255)

                                                                                   aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc      >  1:8478021/1‑93 (MQ=255)

                                                                                   aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc      >  2:7810086/1‑93 (MQ=255)

                                                                                     cgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCt    <  2:1807813/93‑1 (MQ=255)

                                                                                     cgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCt    <  2:9708477/93‑1 (MQ=255)

                                                                                      gcagcaGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTg   <  2:6480153/93‑1 (MQ=255)

                                                                                       cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa  <  1:4233622/93‑1 (MQ=255)

                                                                                       cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa  <  1:1736248/93‑1 (MQ=255)

TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA  >  NC_000913/4444600‑4444779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT  >  NC_000913/4444597‑4444783

TATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGC                                                                                               >  SRR4302540.76735/1‑94 (MQ=60)

 ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA                                                                                              >  SRR4302540.7058257/1‑94 (MQ=60)

 ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA                                                                                              <  SRR4302540.9932359/94‑1 (MQ=60)

 ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA                                                                                              <  SRR4302540.2428172/94‑1 (MQ=60)

 ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA                                                                                              >  SRR4302540.428122/1‑94 (MQ=60)

  TTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAG                                                                                             <  SRR4302540.5020186/94‑1 (MQ=60)

  TTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAG                                                                                             <  SRR4302540.8083034/94‑1 (MQ=60)

  TTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAG                                                                                             <  SRR4302540.3966766/94‑1 (MQ=60)

   TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGG                                                                                            <  SRR4302540.2015795/94‑1 (MQ=60)

    CGAGGCTACACCAACCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGC                                                                                           <  SRR4302540.2017223/94‑1 (MQ=60)

    CGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGCTCTGCCGGAAAGCGCAGCAGGC                                                                                           <  SRR4302540.1863638/94‑1 (MQ=60)

    CGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGC                                                                                           >  SRR4302540.2846626/1‑94 (MQ=60)

    CGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGC                                                                                           >  SRR4302540.2263828/1‑94 (MQ=60)

    CGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGC                                                                                           >  SRR4302540.2574097/1‑94 (MQ=60)

    CGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGC                                                                                           >  SRR4302540.596193/1‑94 (MQ=60)

     GAGGCTACACCAAACCTGTTTACGCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCG                                                                                          <  SRR4302540.2762606/94‑1 (MQ=60)

     GAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCG                                                                                          >  SRR4302540.773004/1‑94 (MQ=60)

     GAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCG                                                                                          >  SRR4302540.6073565/1‑94 (MQ=60)

      AGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGT                                                                                         >  SRR4302540.4629120/1‑94 (MQ=60)

       GGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTC                                                                                        >  SRR4302540.772622/1‑94 (MQ=60)

       GGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTC                                                                                        >  SRR4302540.4630262/1‑94 (MQ=60)

        GCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCT                                                                                       <  SRR4302540.5310452/94‑1 (MQ=60)

        GCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCT                                                                                       <  SRR4302540.447667/94‑1 (MQ=60)

         CTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTC                                                                                      >  SRR4302540.1783096/1‑94 (MQ=60)

          TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC                                                                                     >  SRR4302540.6025984/1‑94 (MQ=60)

          TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC                                                                                     >  SRR4302540.3091099/1‑94 (MQ=60)

          TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC                                                                                     <  SRR4302540.5344229/94‑1 (MQ=60)

          TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC                                                                                     <  SRR4302540.7442664/94‑1 (MQ=60)

           ACACCAAACCTGTTTCCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCA                                                                                    <  SRR4302540.9597504/94‑1 (MQ=60)

           ACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCA                                                                                    >  SRR4302540.3591787/1‑94 (MQ=60)

             ACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGC                                                                                  <  SRR4302540.1337648/94‑1 (MQ=60)

             ACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGC                                                                                  >  SRR4302540.8053801/1‑94 (MQ=60)

              CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAACGCGCAGCAGGCGTCTCCAGCG                                                                                 >  SRR4302540.5092531/1‑94 (MQ=60)

              CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCG                                                                                 <  SRR4302540.3411549/94‑1 (MQ=60)

              CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCG                                                                                 >  SRR4302540.5092532/1‑94 (MQ=60)

              CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCG                                                                                 <  SRR4302540.7049619/94‑1 (MQ=60)

              CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGATGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCG                                                                                 <  SRR4302540.2147138/94‑1 (MQ=60)

               CAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGA                                                                                >  SRR4302540.3459180/1‑94 (MQ=60)

               CAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGA                                                                                >  SRR4302540.2065179/1‑94 (MQ=60)

                AAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAT                                                                               >  SRR4302540.9363732/1‑94 (MQ=60)

                AAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGAACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAT                                                                               >  SRR4302540.8680447/1‑94 (MQ=60)

                 AACCTGTTTTCCCTCGATGGTCGCGGGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATG                                                                              <  SRR4302540.2614030/94‑1 (MQ=60)

                 AACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATG                                                                              <  SRR4302540.2614031/94‑1 (MQ=60)

                 AACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATG                                                                              <  SRR4302540.5213052/94‑1 (MQ=60)

                    CTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGG                                                                           >  SRR4302540.6555328/1‑94 (MQ=60)

                    CTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGG                                                                           <  SRR4302540.1292132/94‑1 (MQ=60)

                    CTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGG                                                                           <  SRR4302540.8768794/94‑1 (MQ=60)

                     TGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGT                                                                          <  SRR4302540.4966179/94‑1 (MQ=60)

                      GTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTG                                                                         <  SRR4302540.8149422/94‑1 (MQ=60)

                      GTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTG                                                                         >  SRR4302540.2212263/1‑94 (MQ=60)

                       TTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGA                                                                        <  SRR4302540.5544850/94‑1 (MQ=60)

                       TTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGA                                                                        <  SRR4302540.5789082/94‑1 (MQ=60)

                       TTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGA                                                                        <  SRR4302540.1894461/94‑1 (MQ=60)

                       TTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGA                                                                        <  SRR4302540.5049369/94‑1 (MQ=60)

                        TTTCCCTCGATGGTCGCGTGGATGTCCCTTGGTCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGAT                                                                       <  SRR4302540.2592710/94‑1 (MQ=60)

                         TACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATG                                                                      >  SRR4302540.3111121/1‑94 (MQ=60)

                         TACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATG                                                                      >  SRR4302540.7805933/1‑94 (MQ=60)

                          ACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGC                                                                     >  SRR4302540.7063309/1‑94 (MQ=60)

                           CCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCT                                                                    >  SRR4302540.9526317/1‑94 (MQ=60)

                            CCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTT                                                                   >  SRR4302540.7412560/1‑94 (MQ=60)

                              TCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAA                                                                 <  SRR4302540.9204337/94‑1 (MQ=60)

                               CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC                                                                <  SRR4302540.483043/94‑1 (MQ=60)

                               CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC                                                                <  SRR4302540.9823401/94‑1 (MQ=60)

                               CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC                                                                >  SRR4302540.1084651/1‑94 (MQ=60)

                               CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC                                                                <  SRR4302540.9823402/94‑1 (MQ=60)

                               CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC                                                                >  SRR4302540.7115524/1‑94 (MQ=60)

                                GATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACG                                                               <  SRR4302540.3461876/94‑1 (MQ=60)

                                GATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACG                                                               >  SRR4302540.3644195/1‑94 (MQ=60)

                                GATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACG                                                               >  SRR4302540.8288627/1‑94 (MQ=60)

                                GATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACG                                                               >  SRR4302540.3866616/1‑94 (MQ=60)

                                GATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACG                                                               >  SRR4302540.6724856/1‑94 (MQ=60)

                                GATGGTCCCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACG                                                               <  SRR4302540.222116/94‑1 (MQ=60)

                                  TGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGAT                                                             <  SRR4302540.2448197/94‑1 (MQ=60)

                                  TGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGAT                                                             <  SRR4302540.2834335/94‑1 (MQ=60)

                                   GGTGGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATA                                                            <  SRR4302540.3125235/94‑1 (MQ=60)

                                   GGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATA                                                            >  SRR4302540.2701573/1‑94 (MQ=60)

                                   GGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATA                                                            <  SRR4302540.9045986/94‑1 (MQ=60)

                                    GTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAA                                                           <  SRR4302540.8905118/94‑1 (MQ=60)

                                    GTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAA                                                           <  SRR4302540.8905117/94‑1 (MQ=60)

                                     TCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAC                                                          >  SRR4302540.1204080/1‑94 (MQ=60)

                                     GCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAC                                                          <  SRR4302540.740336/94‑1 (MQ=60)

                                      CGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACC                                                         <  SRR4302540.6338705/94‑1 (MQ=60)

                                      CGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACC                                                         <  SRR4302540.3028944/94‑1 (MQ=60)

                                       GCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCT                                                        <  SRR4302540.5800011/94‑1 (MQ=60)

                                       GCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCT                                                        <  SRR4302540.3572081/94‑1 (MQ=60)

                                       GCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCT                                                        <  SRR4302540.10097485/94‑1 (MQ=60)

                                        CGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTG                                                       >  SRR4302540.5708521/1‑94 (MQ=60)

                                         GTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGC                                                      <  SRR4302540.1767375/94‑1 (MQ=60)

                                          TGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCA                                                     >  SRR4302540.9982415/1‑94 (MQ=60)

                                           GGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAA                                                    <  SRR4302540.2470799/94‑1 (MQ=60)

                                           GGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAA                                                    >  SRR4302540.7413143/1‑94 (MQ=60)

                                           GGATGTCCCTTGGGCACGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAA                                                    >  SRR4302540.7533800/1‑94 (MQ=60)

                                            GTTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAC                                                   >  SRR4302540.1924274/1‑94 (MQ=60)

                                            GATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAC                                                   <  SRR4302540.9345136/94‑1 (MQ=60)

                                            GATGTCCCTTGGGCGCGCATCATGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAC                                                   <  SRR4302540.8936498/94‑1 (MQ=60)

                                             ATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACC                                                  <  SRR4302540.9304803/94‑1 (MQ=60)

                                             ATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACC                                                  >  SRR4302540.2392271/1‑94 (MQ=60)

                                              TGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCG                                                 <  SRR4302540.1058515/94‑1 (MQ=60)

                                               GTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGG                                                >  SRR4302540.1581823/1‑94 (MQ=60)

                                               GTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGA                                                >  SRR4302540.6976670/1‑94 (MQ=60)

                                                 CCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAA                                              <  SRR4302540.4731582/94‑1 (MQ=60)

                                                 CCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGGGGGGATGCTTAACGATAACCTGCAACCGGAA                                              >  SRR4302540.8802139/1‑94 (MQ=60)

                                                  CCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAG                                             <  SRR4302540.5540734/94‑1 (MQ=60)

                                                  CCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAG                                             >  SRR4302540.9310308/1‑94 (MQ=60)

                                                   CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGA                                            >  SRR4302540.5368960/1‑94 (MQ=60)

                                                   CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGA                                            <  SRR4302540.4380524/94‑1 (MQ=60)

                                                   CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGA                                            <  SRR4302540.8100237/94‑1 (MQ=60)

                                                    TTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAG                                           <  SRR4302540.4900482/94‑1 (MQ=60)

                                                    TTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAG                                           >  SRR4302540.6146180/1‑94 (MQ=60)

                                                    CTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCACCCGGAAGAG                                           <  SRR4302540.5391353/94‑1 (MQ=60)

                                                      GGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCC                                         <  SRR4302540.736926/94‑1 (MQ=60)

                                                      GGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCC                                         <  SRR4302540.7056133/94‑1 (MQ=60)

                                                         CGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAA                                      >  SRR4302540.388030/1‑94 (MQ=60)

                                                           CGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAA                                    >  SRR4302540.7378676/1‑94 (MQ=60)

                                                            GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAG                                   >  SRR4302540.2555988/1‑94 (MQ=60)

                                                            GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC                                   <  SRR4302540.8497171/94‑1 (MQ=60)

                                                            GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC                                   <  SRR4302540.1324770/94‑1 (MQ=60)

                                                            GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC                                   <  SRR4302540.1190215/94‑1 (MQ=60)

                                                            GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC                                   <  SRR4302540.2604888/94‑1 (MQ=60)

                                                            GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC                                   >  SRR4302540.6589312/1‑94 (MQ=60)

                                                             CATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACG                                  >  SRR4302540.4873778/1‑94 (MQ=60)

                                                             CATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACG                                  >  SRR4302540.1940495/1‑94 (MQ=60)

                                                             CATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACG                                  <  SRR4302540.8587565/94‑1 (MQ=60)

                                                             CATCGTGGGGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACG                                  <  SRR4302540.8700659/94‑1 (MQ=60)

                                                              ATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGG                                 >  SRR4302540.8971313/1‑94 (MQ=60)

                                                              ATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGG                                 >  SRR4302540.3289128/1‑94 (MQ=60)

                                                              ATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGG                                 >  SRR4302540.8971312/1‑94 (MQ=60)

                                                              ATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGG                                 <  SRR4302540.9980260/94‑1 (MQ=60)

                                                              ATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGG                                 >  SRR4302540.3628003/1‑94 (MQ=60)

                                                              ATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGG                                 >  SRR4302540.2323454/1‑94 (MQ=60)

                                                               TCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGC                                <  SRR4302540.3856431/94‑1 (MQ=60)

                                                                CGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGAG                               >  SRR4302540.5348749/1‑94 (MQ=60)

                                                                 GTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAGCGGCGT                              >  SRR4302540.2869741/1‑94 (MQ=60)

                                                                 GTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGT                              >  SRR4302540.2109767/1‑94 (MQ=60)

                                                                 GTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGT                              >  SRR4302540.5617871/1‑94 (MQ=60)

                                                                  TGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTC                             >  SRR4302540.7294500/1‑94 (MQ=60)

                                                                   GGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCG                            <  SRR4302540.7003301/94‑1 (MQ=60)

                                                                     TGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAT                          <  SRR4302540.974896/94‑1 (MQ=60)

                                                                     TGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAT                          <  SRR4302540.1803501/94‑1 (MQ=60)

                                                                     TGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAT                          >  SRR4302540.1663035/1‑94 (MQ=60)

                                                                     TGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCACCCGGAAGAGCCGAAAACGGCGTCGAT                          <  SRR4302540.169146/94‑1 (MQ=60)

                                                                     TGCACGATCTGCCGAAAAGCGCAGCAGGCGTCTCCAGCGATGTGTTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAACCGGCGTCGAT                          <  SRR4302540.1122159/94‑1 (MQ=60)

                                                                      GCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATT                         <  SRR4302540.616018/94‑1 (MQ=60)

                                                                      GCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATT                         <  SRR4302540.8278773/94‑1 (MQ=60)

                                                                      GCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGACGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATT                         <  SRR4302540.2103348/94‑1 (MQ=60)

                                                                        ACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCC                       >  SRR4302540.1112744/1‑94 (MQ=60)

                                                                        ACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCC                       <  SRR4302540.8982496/94‑1 (MQ=60)

                                                                        ACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCC                       <  SRR4302540.5558146/94‑1 (MQ=60)

                                                                          GATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGT                     >  SRR4302540.5586581/1‑94 (MQ=60)

                                                                           ATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAT                    >  SRR4302540.3424633/1‑94 (MQ=60)

                                                                           ATCTGCCGGAAAGCGCAGCAGGCGTCTCAAGCGTTGTGGTGATGCTTAACGATAACCTGCAAacgtaagtcccaaaaccggtttggataacatt                    >  SRR4302540.443189/1‑62 (MQ=60)

                                                                              TGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAACACGGCGTCGATTCCGATTAA                 <  SRR4302540.5633782/94‑1 (MQ=60)

                                                                               GCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAAC                >  SRR4302540.6329770/1‑94 (MQ=60)

                                                                               GCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTCCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAAC                <  SRR4302540.4003046/94‑1 (MQ=60)

                                                                                CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA               <  SRR4302540.420329/94‑1 (MQ=60)

                                                                                CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA               <  SRR4302540.9490940/94‑1 (MQ=60)

                                                                                CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCCGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA               >  SRR4302540.9397922/1‑94 (MQ=60)

                                                                                 CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG              >  SRR4302540.9198826/1‑94 (MQ=60)

                                                                                 CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG              <  SRR4302540.9828123/94‑1 (MQ=60)

                                                                                 CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG              <  SRR4302540.2354800/94‑1 (MQ=60)

                                                                                 CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG              <  SRR4302540.6940584/94‑1 (MQ=60)

                                                                                  GGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGT             <  SRR4302540.2973350/94‑1 (MQ=60)

                                                                                   GAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTA            <  SRR4302540.4164538/94‑1 (MQ=60)

                                                                                   GAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTA            <  SRR4302540.5966340/94‑1 (MQ=60)

                                                                                   GAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTA            <  SRR4302540.8000759/94‑1 (MQ=60)

                                                                                    AAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAA           >  SRR4302540.362850/1‑94 (MQ=60)

                                                                                     AAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAGCCTGCAGCCGGAAGAGCCGAACACGGCGTCGATTCCGATTAACAGTAAC          <  SRR4302540.2303673/94‑1 (MQ=60)

                                                                                     AAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC          >  SRR4302540.8576493/1‑94 (MQ=60)

                                                                                      AGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACC         <  SRR4302540.5970635/94‑1 (MQ=60)

                                                                                        CGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTG       >  SRR4302540.1970264/1‑94 (MQ=60)

                                                                                        CGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTG       <  SRR4302540.3697142/94‑1 (MQ=60)

                                                                                          CAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAT     <  SRR4302540.1754995/94‑1 (MQ=60)

                                                                                          CAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAT     <  SRR4302540.7977953/94‑1 (MQ=60)

                                                                                          CAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAT     <  SRR4302540.4337932/94‑1 (MQ=60)

                                                                                          CAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAT     <  SRR4302540.4279693/94‑1 (MQ=60)

                                                                                           AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT    >  SRR4302540.9475790/1‑94 (MQ=60)

                                                                                           AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT    >  SRR4302540.147300/1‑94 (MQ=60)

                                                                                           AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT    <  SRR4302540.9836734/94‑1 (MQ=60)

                                                                                           AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT    <  SRR4302540.9836735/94‑1 (MQ=60)

                                                                                           AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT    >  SRR4302540.6710150/1‑94 (MQ=60)

                                                                                            GCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG   <  SRR4302540.9721354/94‑1 (MQ=60)

                                                                                            GCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG   <  SRR4302540.5318636/94‑1 (MQ=60)

                                                                                            GCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG   <  SRR4302540.2909366/94‑1 (MQ=60)

                                                                                            GCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG   <  SRR4302540.2909652/94‑1 (MQ=60)

                                                                                             CAGGCGTCTCCAGCGATGTGGTGATGCTTACCGATAACCTGCAACGGGAGGAGCCGAAACCGGCGTCGATTCCGATTAACAGTAACCTGATTGT  <  SRR4302540.4362495/94‑1 (MQ=60)

TATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT  >  NC_000913/4444597‑4444783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`