Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,444,690 |
T→C |
V1001A (GTA→GCA) |
ytfN → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,444,690 | 0 | T | C | 100.0%
| 748.1
/ NA
| 234 | V1001A (GTA→GCA) | ytfN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (115/119); total (115/119) |
Only 100 of 247 total aligned reads displayed.
TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA > NC_000913/4444600‑4444779
|
tCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGcagcag < 2:846396/93‑1 (MQ=255)
aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg > 1:3771566/1‑93 (MQ=255)
aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg > 2:3869046/1‑93 (MQ=255)
aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg < 1:4388597/93‑1 (MQ=255)
ggCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGt < 2:4711015/93‑1 (MQ=255)
tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc < 2:316872/93‑1 (MQ=255)
tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc < 1:1774876/93‑1 (MQ=255)
tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc > 2:2140492/1‑93 (MQ=255)
acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc > 1:5734666/1‑93 (MQ=255)
acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc > 2:5497677/1‑93 (MQ=255)
acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc > 1:5191711/1‑93 (MQ=255)
cacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCa > 2:4154334/1‑93 (MQ=255)
acCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg < 2:281110/93‑1 (MQ=255)
aaaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGa < 1:293362/93‑1 (MQ=255)
aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt > 1:422143/1‑93 (MQ=255)
aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg < 2:3017119/93‑1 (MQ=255)
aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg > 1:1341958/1‑93 (MQ=255)
aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg < 1:742681/93‑1 (MQ=255)
gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt > 1:4596730/1‑93 (MQ=255)
gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt > 1:2968197/1‑93 (MQ=255)
gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt > 2:4275437/1‑93 (MQ=255)
ttACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa < 1:3500174/93‑1 (MQ=255)
tACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGAt < 2:4255063/93‑1 (MQ=255)
aCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCCGCAGGCGTCTCCAGCGATGTGGTGATg > 2:2304515/1‑93 (MQ=255)
cccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGc > 1:2918822/1‑93 (MQ=255)
ccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGCGGTGATGCt > 2:6273175/1‑93 (MQ=255)
ccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGAGCAGCAGGCGTCTCCAGCGATGTGGTGATGCt > 1:1217395/1‑93 (MQ=255)
cTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCtt < 1:2215/93‑1 (MQ=255)
tCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTa > 2:5607447/1‑93 (MQ=255)
tCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTa > 2:2250569/1‑93 (MQ=255)
tCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTa > 2:4848651/1‑93 (MQ=255)
cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa < 1:2886233/93‑1 (MQ=255)
cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa > 1:2665378/1‑93 (MQ=255)
cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa < 1:199979/93‑1 (MQ=255)
cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa < 1:3410334/93‑1 (MQ=255)
gATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAc > 2:4652167/1‑93 (MQ=255)
tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa > 2:266390/1‑93 (MQ=255)
tCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATaa < 1:4944618/93‑1 (MQ=255)
tCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATaa < 2:3098471/93‑1 (MQ=255)
gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc < 2:2741536/93‑1 (MQ=255)
gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc < 1:4477005/93‑1 (MQ=255)
cgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTGACGATAACCt > 2:8953/1‑93 (MQ=255)
cgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAACt > 2:1123690/1‑93 (MQ=255)
cgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGACGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCt < 2:4496219/93‑1 (MQ=255)
gTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTg > 2:3415248/1‑93 (MQ=255)
tGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGTCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGc > 2:5373987/1‑93 (MQ=255)
tGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGc < 2:2442238/93‑1 (MQ=255)
ggATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCa < 2:631397/93‑1 (MQ=255)
ggATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCa < 2:2048223/93‑1 (MQ=255)
gATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCaa > 1:3103852/1‑93 (MQ=255)
aTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAc > 2:1294451/1‑93 (MQ=255)
aTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAc > 2:1850479/1‑93 (MQ=255)
tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc > 1:4654779/1‑93 (MQ=255)
tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc > 2:5055962/1‑93 (MQ=255)
tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCgg > 1:3559337/1‑93 (MQ=255)
tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCgg > 1:3296084/1‑93 (MQ=255)
tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCgg > 2:5798727/1‑93 (MQ=255)
ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa > 1:4085062/1‑93 (MQ=255)
ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa < 2:1397994/93‑1 (MQ=255)
cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag > 2:2575519/1‑93 (MQ=255)
cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag > 1:3523686/1‑93 (MQ=255)
ttGGGCGCGCATCGTGTTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAaga < 2:1648406/93‑1 (MQ=255)
ttGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAagg > 1:5507828/1‑92 (MQ=255)
gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc < 1:552810/93‑1 (MQ=255)
gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc > 2:5854039/1‑93 (MQ=255)
ggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGcc < 1:1305862/93‑1 (MQ=255)
ggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGcc > 2:3816875/1‑93 (MQ=255)
gcgcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGGCGaa > 2:6035180/1‑93 (MQ=255)
gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGTGCCGaaaa < 2:6144100/93‑1 (MQ=255)
gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaaa < 1:89600/93‑1 (MQ=255)
gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaaa < 2:3504860/93‑1 (MQ=255)
cATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc > 2:3465146/1‑93 (MQ=255)
cATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc < 2:360110/93‑1 (MQ=255)
tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg < 2:1691166/93‑1 (MQ=255)
tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg > 1:1231393/1‑93 (MQ=255)
gtggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCg < 2:3384307/93‑1 (MQ=255)
ggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTc > 1:686651/1‑93 (MQ=255)
ggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTc < 1:5589329/93‑1 (MQ=255)
ggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTc < 1:4949844/93‑1 (MQ=255)
tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa < 1:4760843/93‑1 (MQ=255)
gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt > 1:5346162/1‑93 (MQ=255)
cgcGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAtt < 1:106213/91‑1 (MQ=255)
cACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAtt < 2:3307058/93‑1 (MQ=255)
gATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCg > 2:3697421/1‑93 (MQ=255)
aTCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGAGTCGATTCCGa > 2:5339800/1‑93 (MQ=255)
cTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAtt > 2:1886625/1‑93 (MQ=255)
cTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAtt < 1:3941902/93‑1 (MQ=255)
tGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTa > 1:2437103/1‑93 (MQ=255)
gCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTaa < 1:2756666/93‑1 (MQ=255)
cGGAAAGCGCAGCATGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa < 1:3565766/93‑1 (MQ=255)
cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa > 1:5682957/1‑93 (MQ=255)
gAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGt > 2:2954525/1‑93 (MQ=255)
aaaGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTa > 2:1529284/1‑93 (MQ=255)
aaGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTaa < 2:4031391/93‑1 (MQ=255)
aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc < 1:6066422/93‑1 (MQ=255)
aGCGCAGCAGGCGGCTGCAGAGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc < 2:4449274/93‑1 (MQ=255)
gcgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAcc < 1:4422563/93‑1 (MQ=255)
gcgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAcc < 1:4148138/93‑1 (MQ=255)
cgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCt < 2:2229840/93‑1 (MQ=255)
cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa < 2:5183364/93‑1 (MQ=255)
|
TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA > NC_000913/4444600‑4444779
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT > NC_000913/4444598‑4444783
|
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA < SRR4302533.449626/94‑1 (MQ=60)
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA < SRR4302533.2382099/94‑1 (MQ=60)
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA > SRR4302533.5047352/1‑94 (MQ=60)
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA > SRR4302533.6189485/1‑94 (MQ=60)
TTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAG < SRR4302533.2782779/94‑1 (MQ=60)
TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGG < SRR4302533.4126476/94‑1 (MQ=60)
GAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCG > SRR4302533.3794687/1‑94 (MQ=60)
GAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCG < SRR4302533.4431626/94‑1 (MQ=60)
AGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGT < SRR4302533.3880384/94‑1 (MQ=60)
AGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGT > SRR4302533.1878641/1‑94 (MQ=60)
AGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGT < SRR4302533.4415094/94‑1 (MQ=60)
GGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTC < SRR4302533.3634958/94‑1 (MQ=60)
GGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTC > SRR4302533.4805830/1‑94 (MQ=60)
GGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTC > SRR4302533.5518523/1‑94 (MQ=60)
GCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCT < SRR4302533.1224793/94‑1 (MQ=60)
CTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTC > SRR4302533.5083460/1‑94 (MQ=60)
TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC > SRR4302533.5223030/1‑94 (MQ=60)
TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC > SRR4302533.3358068/1‑94 (MQ=60)
TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC > SRR4302533.5769284/1‑94 (MQ=60)
TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC < SRR4302533.1785686/94‑1 (MQ=60)
CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCG < SRR4302533.297571/94‑1 (MQ=60)
CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCG < SRR4302533.2075177/94‑1 (MQ=60)
CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCG > SRR4302533.4708384/1‑94 (MQ=60)
CCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCG > SRR4302533.6143530/1‑94 (MQ=60)
AAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAT < SRR4302533.3502130/94‑1 (MQ=60)
AAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAT < SRR4302533.295153/94‑1 (MQ=60)
AAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAT > SRR4302533.424668/1‑94 (MQ=60)
AACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATG > SRR4302533.1350038/1‑94 (MQ=60)
ACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGT < SRR4302533.747052/94‑1 (MQ=60)
CCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTG > SRR4302533.4654660/1‑94 (MQ=60)
CTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGG > SRR4302533.740366/1‑94 (MQ=60)
TGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCCGCGATGgggc > SRR4302533.5744738/1‑90 (MQ=60)
TGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGT > SRR4302533.2986344/1‑94 (MQ=60)
TGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGT > SRR4302533.4624576/1‑94 (MQ=60)
GTTGACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTG < SRR4302533.5593239/94‑1 (MQ=60)
TTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGA < SRR4302533.5498607/94‑1 (MQ=60)
TTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGAT < SRR4302533.3521760/94‑1 (MQ=60)
TACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAACGATGTGGTGATG < SRR4302533.1608179/94‑1 (MQ=60)
ACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGC > SRR4302533.2936708/1‑94 (MQ=60)
CCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCT > SRR4302533.2941009/1‑94 (MQ=60)
CCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCT > SRR4302533.1311978/1‑94 (MQ=60)
CCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGAGCAGCAGGCGTCTCCAGCGATGTGGTGATGCT > SRR4302533.1224705/1‑94 (MQ=60)
CTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTA < SRR4302533.2232/94‑1 (MQ=60)
CTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTA > SRR4302533.3537791/1‑94 (MQ=60)
TCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAA > SRR4302533.2681734/1‑94 (MQ=60)
CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGTACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGctgcgggcatgattaat > SRR4302533.4583297/1‑77 (MQ=60)
CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC < SRR4302533.3431398/94‑1 (MQ=60)
CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC < SRR4302533.2903982/94‑1 (MQ=60)
CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC < SRR4302533.4423996/94‑1 (MQ=60)
CGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAC < SRR4302533.201246/94‑1 (MQ=60)
TGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGAT < SRR4302533.3253317/94‑1 (MQ=60)
GTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAA < SRR4302533.3576324/94‑1 (MQ=60)
TCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAC < SRR4302533.4974546/94‑1 (MQ=60)
GCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCT < SRR4302533.4504088/94‑1 (MQ=60)
GCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCT < SRR4302533.5726853/94‑1 (MQ=60)
CGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTG > SRR4302533.2287438/1‑94 (MQ=60)
GGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAA > SRR4302533.3026247/1‑94 (MQ=60)
GGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAA > SRR4302533.3122935/1‑94 (MQ=60)
GATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAC < SRR4302533.4035603/94‑1 (MQ=60)
ATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACC > SRR4302533.4682985/1‑94 (MQ=60)
ATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACC > SRR4302533.5658980/1‑94 (MQ=60)
ATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAACTGCAACC > SRR4302533.1148733/1‑94 (MQ=60)
GTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGG > SRR4302533.3581270/1‑94 (MQ=60)
GTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGG > SRR4302533.3581271/1‑94 (MQ=60)
GTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGG > SRR4302533.554416/1‑94 (MQ=60)
GTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGG > SRR4302533.3316429/1‑94 (MQ=60)
TCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGA > SRR4302533.2760894/1‑94 (MQ=60)
CCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAA > SRR4302533.4109930/1‑94 (MQ=60)
CCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAA < SRR4302533.5606766/94‑1 (MQ=60)
CCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAA > SRR4302533.5136631/1‑94 (MQ=60)
CCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAG > SRR4302533.3545404/1‑94 (MQ=60)
CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGG > SRR4302533.5541071/1‑94 (MQ=60)
TTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAG < SRR4302533.3514819/94‑1 (MQ=60)
GGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCC < SRR4302533.556086/94‑1 (MQ=60)
GGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCG < SRR4302533.1313707/94‑1 (MQ=60)
GCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGA < SRR4302533.1484175/94‑1 (MQ=60)
CGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAA < SRR4302533.597911/94‑1 (MQ=60)
GCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAA > SRR4302533.574275/1‑94 (MQ=60)
GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC < SRR4302533.90167/94‑1 (MQ=60)
GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC < SRR4302533.2815501/94‑1 (MQ=60)
CATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACG < SRR4302533.753420/94‑1 (MQ=60)
ATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGG > SRR4302533.1238765/1‑94 (MQ=60)
ATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGG < SRR4302533.2939470/94‑1 (MQ=60)
GTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGT > SRR4302533.4175288/1‑94 (MQ=60)
TGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTC > SRR4302533.690711/1‑94 (MQ=60)
GGTGGACGATCTGCCGGAAAGCGCAGCAGGCGCCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCG < SRR4302533.4979823/94‑1 (MQ=60)
GGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCG < SRR4302533.5623097/94‑1 (MQ=60)
GGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCG < SRR4302533.4979824/94‑1 (MQ=60)
TGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAT < SRR4302533.4459831/94‑1 (MQ=60)
TGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAT < SRR4302533.4789726/94‑1 (MQ=60)
TGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAT < SRR4302533.2862335/94‑1 (MQ=60)
TGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAT > SRR4302533.5378225/1‑94 (MQ=60)
CGCGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTC < SRR4302533.106876/94‑1 (MQ=60)
ACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCC > SRR4302533.2632413/1‑94 (MQ=60)
CTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTA > SRR4302533.2452150/1‑94 (MQ=60)
CTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTA < SRR4302533.3965954/94‑1 (MQ=60)
GCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAAC < SRR4302533.2773571/94‑1 (MQ=60)
CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA < SRR4302533.248168/94‑1 (MQ=60)
CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA > SRR4302533.5717287/1‑94 (MQ=60)
CGGAAAGCGCAGCATGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG < SRR4302533.3587743/94‑1 (MQ=60)
CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG > SRR4302533.5291087/1‑94 (MQ=60)
CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG < SRR4302533.2084537/94‑1 (MQ=60)
CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG < SRR4302533.2923921/94‑1 (MQ=60)
GGAAAGCGCAGCAGGCGTCTCCATCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAACAGCCGAAAACGGCGTAGATTTCGATTAACAGT > SRR4302533.425320/1‑94 (MQ=60)
GGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGT > SRR4302533.1304341/1‑94 (MQ=60)
GAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTA > SRR4302533.1320312/1‑94 (MQ=60)
AAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC < SRR4302533.2990358/94‑1 (MQ=60)
AAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC > SRR4302533.3552791/1‑94 (MQ=60)
AAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC < SRR4302533.4179507/94‑1 (MQ=60)
AGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACC > SRR4302533.4778651/1‑94 (MQ=60)
AGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACC < SRR4302533.6103136/94‑1 (MQ=60)
AGCGCAGCAGGCGTCTCCAGCGATGCGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACC < SRR4302533.6310645/94‑1 (MQ=60)
GCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCT < SRR4302533.4449302/94‑1 (MQ=60)
GCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCT < SRR4302533.4173269/94‑1 (MQ=60)
CGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTG < SRR4302533.4518056/94‑1 (MQ=60)
GCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGT > SRR4302533.852800/1‑94 (MQ=60)
GCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA > SRR4302533.3969121/1‑94 (MQ=60)
CAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAT < SRR4302533.3780816/94‑1 (MQ=60)
AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT < SRR4302533.1727745/94‑1 (MQ=60)
AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT < SRR4302533.5969036/94‑1 (MQ=60)
AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT > SRR4302533.2209905/1‑94 (MQ=60)
GCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG > SRR4302533.5590525/1‑94 (MQ=60)
CAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT < SRR4302533.2343993/94‑1 (MQ=60)
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ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT > NC_000913/4444598‑4444783
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
