Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAG > NC_000913/668964‑669150
|
TCCAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑G < SRR4302540.9947591/94‑1 (MQ=60)
TCCAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑G < SRR4302540.2021513/94‑1 (MQ=60)
CCAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GT < SRR4302540.2301662/94‑1 (MQ=60)
CCAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GG < SRR4302540.4428103/94‑1 (MQ=60)
CAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GGG > SRR4302540.774923/1‑94 (MQ=60)
AGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑Ggtg < SRR4302540.9564145/94‑4 (MQ=60)
AGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑Ggtg < SRR4302540.5972677/94‑4 (MQ=60)
GTTCACTGCATAAAACCAGATCAAAGGATACACCATGTAGCAGCGTATTCAGATTTAGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGG < SRR4302540.48551/94‑1 (MQ=60)
GTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGG > SRR4302540.1561145/1‑94 (MQ=60)
TTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGG < SRR4302540.1699598/94‑1 (MQ=60)
TTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGC > SRR4302540.7648388/1‑94 (MQ=60)
TTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGC < SRR4302540.2456404/94‑1 (MQ=60)
TTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGC > SRR4302540.7648387/1‑94 (MQ=60)
TTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGC < SRR4302540.471091/94‑1 (MQ=60)
TTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGC > SRR4302540.8170175/1‑94 (MQ=60)
TCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCG > SRR4302540.8463746/1‑94 (MQ=60)
CACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCG > SRR4302540.750250/1‑94 (MQ=60)
CACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑Ggggggcg > SRR4302540.5315409/1‑87 (MQ=60)
ACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGC > SRR4302540.7867767/1‑94 (MQ=60)
ACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCA > SRR4302540.9423582/1‑94 (MQ=60)
CTGCATAAAACCAGATCAAAGGAAACACAATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCAT < SRR4302540.2423400/94‑1 (MQ=60)
GCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATG > SRR4302540.1520768/1‑94 (MQ=60)
CATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGAC < SRR4302540.1121376/94‑1 (MQ=60)
CATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCCCTTGCTCAATCCCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGAC < SRR4302540.7453633/94‑1 (MQ=60)
ATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGAC > SRR4302540.848939/1‑94 (MQ=60)
ATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGAC < SRR4302540.7240054/94‑1 (MQ=60)
ATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACC < SRR4302540.4639045/94‑1 (MQ=60)
ATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACC > SRR4302540.6057296/1‑94 (MQ=60)
ATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GGGGGCGCATGACC > SRR4302540.767570/1‑94 (MQ=60)
TAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACC < SRR4302540.4377152/94‑1 (MQ=60)
TAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACC > SRR4302540.4411896/1‑94 (MQ=60)
TAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACC > SRR4302540.4278212/1‑94 (MQ=60)
TAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACC < SRR4302540.951346/94‑1 (MQ=60)
TAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCG < SRR4302540.1684415/94‑1 (MQ=60)
AAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGC > SRR4302540.982707/1‑94 (MQ=60)
AAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGC > SRR4302540.1230336/1‑94 (MQ=60)
AAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GGGGGCGCATGACCGT > SRR4302540.1905210/1‑94 (MQ=60)
AACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCT > SRR4302540.6863106/1‑94 (MQ=60)
AACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTG > SRR4302540.4327761/1‑94 (MQ=60)
AACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTG > SRR4302540.9862603/1‑94 (MQ=60)
ACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTG < SRR4302540.7430770/94‑1 (MQ=60)
ACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGT > SRR4302540.6823593/1‑94 (MQ=60)
CCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGT > SRR4302540.2496047/1‑94 (MQ=60)
CCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGGCG‑GTGGGCGCATGACCGCTGT > SRR4302540.2143150/1‑94 (MQ=60)
CCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTA > SRR4302540.9436981/1‑94 (MQ=60)
CAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTA < SRR4302540.7755129/94‑1 (MQ=60)
AGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAA < SRR4302540.785278/94‑1 (MQ=60)
GATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAA > SRR4302540.6113412/1‑94 (MQ=60)
GATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGAGGTCAG‑GGGG‑G‑GTGGGCGCCTGACCGCTGTAAA > SRR4302540.6113413/1‑94 (MQ=60)
ATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAG > SRR4302540.5636333/1‑94 (MQ=60)
ATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAG < SRR4302540.5767971/94‑1 (MQ=60)
ATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGA < SRR4302540.2909119/94‑1 (MQ=60)
TCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGA > SRR4302540.7671330/1‑94 (MQ=60)
TCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGA > SRR4302540.10113922/1‑94 (MQ=60)
TCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGA > SRR4302540.1120539/1‑94 (MQ=60)
CAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGAC < SRR4302540.4880191/94‑1 (MQ=60)
CAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACC > SRR4302540.8307309/1‑94 (MQ=60)
AAAGGAAACACCATGTAGCAGCGTATGCAGGTTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCA > SRR4302540.2484562/1‑94 (MQ=60)
AAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACC < SRR4302540.1081851/94‑1 (MQ=60)
AAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACC < SRR4302540.9762805/94‑1 (MQ=60)
AAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCA > SRR4302540.8977942/1‑94 (MQ=60)
AGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCAT > SRR4302540.3469581/1‑94 (MQ=60)
AGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCAT > SRR4302540.2197975/1‑94 (MQ=60)
AGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATC < SRR4302540.5837431/94‑1 (MQ=60)
GGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATC > SRR4302540.6678224/1‑94 (MQ=60)
GGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCG > SRR4302540.7977272/1‑94 (MQ=60)
GAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGA < SRR4302540.1904412/94‑1 (MQ=60)
AAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGA < SRR4302540.5372210/94‑1 (MQ=60)
AAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGA < SRR4302540.5372209/94‑1 (MQ=60)
AACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGAT < SRR4302540.1009272/94‑1 (MQ=60)
AACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGAT < SRR4302540.1009274/94‑1 (MQ=60)
CACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATAT > SRR4302540.1813385/1‑94 (MQ=60)
CACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATAT > SRR4302540.9366944/1‑94 (MQ=60)
ACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATT < SRR4302540.1677809/94‑1 (MQ=60)
ACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GGGGGCGCATGACCGCTGTAAAGACCATCGATATT > SRR4302540.3093411/1‑94 (MQ=60)
CATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCG < SRR4302540.481283/94‑1 (MQ=60)
CATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCG > SRR4302540.1439240/1‑94 (MQ=60)
CATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCG > SRR4302540.930510/1‑94 (MQ=60)
CATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCG > SRR4302540.6892299/1‑94 (MQ=60)
ATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGC > SRR4302540.5461827/1‑94 (MQ=60)
ATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GAGGGCGCAGGACCGCTGTAAAGACCATCGATATTCGT > SRR4302540.5461828/1‑94 (MQ=60)
ATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCT > SRR4302540.3076137/1‑94 (MQ=60)
TGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCT < SRR4302540.1041603/94‑1 (MQ=60)
GTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTT < SRR4302540.1600591/94‑1 (MQ=60)
TAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTG < SRR4302540.91889/94‑1 (MQ=60)
AGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGC < SRR4302540.1900523/94‑1 (MQ=60)
AGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGC < SRR4302540.4350049/94‑1 (MQ=60)
GCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGT > SRR4302540.997625/1‑94 (MQ=60)
CAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGT > SRR4302540.5867293/1‑94 (MQ=60)
CAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGT > SRR4302540.101645/1‑94 (MQ=60)
AGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTT < SRR4302540.7075081/94‑1 (MQ=60)
AGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGGT > SRR4302540.8363358/1‑94 (MQ=60)
AGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTT > SRR4302540.2270458/1‑94 (MQ=60)
GCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTT < SRR4302540.5099314/94‑1 (MQ=60)
CGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCA < SRR4302540.571065/94‑1 (MQ=60)
CGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCA > SRR4302540.9808941/1‑94 (MQ=60)
TATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCAC < SRR4302540.5229498/94‑1 (MQ=60)
TATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCAC > SRR4302540.9004108/1‑94 (MQ=60)
TATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GCGGCCGCATGACCGCTGTAAAGACCATGGATATTCGCTTGCGTTTCAC > SRR4302540.9500650/1‑94 (MQ=60)
ATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTACAGACCATCGATATTCGCTTGCGTTTCACC > SRR4302540.262525/1‑94 (MQ=60)
ATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACC > SRR4302540.2196686/1‑94 (MQ=60)
ATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACC > SRR4302540.262524/1‑94 (MQ=60)
ATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACC > SRR4302540.7175939/1‑94 (MQ=60)
ATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACA > SRR4302540.3560997/1‑94 (MQ=60)
TGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCAT > SRR4302540.2727384/1‑94 (MQ=60)
tcaggTTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGGAG‑GTAGGCGCATGACCGCTTTAAAGACCATCGATATTCGCTTGCGTTTCACCAT < SRR4302540.3962665/89‑1 (MQ=60)
GCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCAT > SRR4302540.4324828/1‑94 (MQ=60)
CAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATG < SRR4302540.8033792/94‑1 (MQ=60)
AGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGA < SRR4302540.2021420/94‑1 (MQ=60)
AGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGAC > SRR4302540.9127658/1‑94 (MQ=60)
GATTTTGGTCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCAAGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACG < SRR4302540.1678725/94‑1 (MQ=60)
GATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGAC < SRR4302540.2750196/94‑1 (MQ=60)
GATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGAC < SRR4302540.4792352/94‑1 (MQ=60)
GATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGAC < SRR4302540.859440/94‑1 (MQ=60)
ATTTTGCGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACG < SRR4302540.1083323/94‑1 (MQ=60)
CGCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAA > SRR4302540.229988/1‑94 (MQ=60)
CGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAAC > SRR4302540.8913739/1‑94 (MQ=60)
GCTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAAC > SRR4302540.7184831/1‑94 (MQ=60)
GCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACC > SRR4302540.2933350/1‑94 (MQ=60)
GCTGGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACC < SRR4302540.2694646/94‑1 (MQ=60)
CTTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACC > SRR4302540.6970423/1‑94 (MQ=60)
TTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCA < SRR4302540.4853052/94‑1 (MQ=60)
TTGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GGGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCC > SRR4302540.5612864/1‑94 (MQ=60)
TTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCAC > SRR4302540.9620160/1‑94 (MQ=60)
TGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCAC < SRR4302540.5889132/94‑1 (MQ=60)
TGCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATAACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCAC > SRR4302540.3254554/1‑94 (MQ=60)
TGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACA > SRR4302540.3694553/1‑94 (MQ=60)
GCTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACA < SRR4302540.9391594/94‑1 (MQ=60)
CTCAATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAG > SRR4302540.5182642/1‑94 (MQ=60)
CTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGT > SRR4302540.2698796/1‑94 (MQ=60)
CTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGT < SRR4302540.1245833/94‑1 (MQ=60)
AATACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCG > SRR4302540.8607539/1‑94 (MQ=60)
ATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCA > SRR4302540.10056416/1‑94 (MQ=60)
ACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCAT > SRR4302540.4472156/1‑94 (MQ=60)
ACCGCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCAT > SRR4302540.2805138/1‑94 (MQ=60)
ACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATC < SRR4302540.8022511/94‑1 (MQ=60)
CGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCAT < SRR4302540.4129950/94‑1 (MQ=60)
CGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCAT < SRR4302540.6775956/94‑1 (MQ=60)
GCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCAT < SRR4302540.1083106/94‑1 (MQ=60)
GCGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCAT < SRR4302540.7885228/94‑1 (MQ=60)
GCGCGCGGTCA‑‑GGGG‑GAGTGGGCGCATGAACGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCAT < SRR4302540.713520/94‑1 (MQ=60)
GCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATG > SRR4302540.4760186/1‑94 (MQ=60)
CGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATG > SRR4302540.2317499/1‑94 (MQ=60)
CGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATG < SRR4302540.6358810/94‑1 (MQ=60)
CGCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATG < SRR4302540.6624642/94‑1 (MQ=60)
GCGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGC < SRR4302540.2893218/94‑1 (MQ=60)
CGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCC > SRR4302540.5276730/1‑94 (MQ=60)
CGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCC > SRR4302540.2248520/1‑94 (MQ=60)
CGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCC < SRR4302540.678238/94‑1 (MQ=60)
CGCGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCC > SRR4302540.1275006/1‑94 (MQ=60)
GCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCT < SRR4302540.4447019/94‑1 (MQ=60)
CGGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCT < SRR4302540.4292276/94‑1 (MQ=60)
GGTCAGGGGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCT < SRR4302540.4440940/94‑1 (MQ=60)
GGTCAG‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTC > SRR4302540.7476599/1‑94 (MQ=60)
GGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCC > SRR4302540.8016645/1‑94 (MQ=60)
CA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTA > SRR4302540.6650890/1‑94 (MQ=60)
cagGGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGT > SRR4302540.2532178/4‑94 (MQ=60)
agGGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTA > SRR4302540.9325734/3‑94 (MQ=60)
GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCTATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAAC < SRR4302540.3237913/94‑1 (MQ=60)
GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAAC < SRR4302540.2570513/94‑1 (MQ=60)
GGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACG < SRR4302540.3656793/94‑1 (MQ=60)
GGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACG > SRR4302540.3321930/1‑94 (MQ=60)
G‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGAC < SRR4302540.5686316/94‑1 (MQ=60)
G‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGAC < SRR4302540.7085708/94‑1 (MQ=60)
G‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGAC < SRR4302540.2848683/94‑1 (MQ=60)
G‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGAC > SRR4302540.3569453/1‑94 (MQ=60)
G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACA > SRR4302540.5652336/1‑94 (MQ=60)
GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAG > SRR4302540.1242178/1‑94 (MQ=60)
GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAG < SRR4302540.7361328/94‑1 (MQ=60)
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TCCAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCA‑‑GGGG‑G‑GTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAG > NC_000913/668964‑669150
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |