Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGGCGTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAGTCTACACC > NC_000913/808345‑808530
|
CCAGGCGTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCG < SRR4302540.8476069/94‑1 (MQ=60)
CAGGCGTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGC > SRR4302540.10128204/1‑94 (MQ=60)
CAGGCGTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGC < SRR4302540.2214334/94‑1 (MQ=60)
CAGGCGTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGC > SRR4302540.9357004/1‑94 (MQ=60)
CAGGCGTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGC > SRR4302540.5122768/1‑94 (MQ=60)
GTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACGGGCAGAGGGGAGGGCATGGATGTGTATGGGTGCCAGAT > SRR4302540.8985477/1‑94 (MQ=60)
GTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGAT > SRR4302540.6842602/1‑94 (MQ=60)
GTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGAT > SRR4302540.8985478/1‑94 (MQ=60)
GTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGAT > SRR4302540.367334/1‑94 (MQ=60)
GTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGAT > SRR4302540.74988/1‑94 (MQ=60)
GTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGAT > SRR4302540.8197079/1‑94 (MQ=60)
GTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGAT > SRR4302540.9083355/1‑94 (MQ=60)
TCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATA > SRR4302540.4480755/1‑94 (MQ=60)
TCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATA > SRR4302540.4318114/1‑94 (MQ=60)
CTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATAT < SRR4302540.431246/94‑1 (MQ=60)
CTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATAT > SRR4302540.2978274/1‑94 (MQ=60)
TGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATG > SRR4302540.4705714/1‑94 (MQ=60)
cctgCAGACAAAATCAGCTCGCAACCTTCGTCTCTCGCCACCGGATAAACCGGCAGAGGGGAGGTCATGGATTTGTATGGGCGCCAGATATGGC < SRR4302540.2603090/90‑1 (MQ=60)
CCGTGAGACAAAATCAGCTCGCAGCCTGCGGCGCTCACCCCCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGC < SRR4302540.2603089/94‑1 (MQ=60)
CCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGC < SRR4302540.4664311/94‑1 (MQ=60)
CGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCG > SRR4302540.2990390/1‑94 (MQ=60)
GTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGT > SRR4302540.5674277/1‑94 (MQ=60)
TCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTA < SRR4302540.1906982/94‑1 (MQ=60)
AGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGG > SRR4302540.3626891/1‑94 (MQ=60)
AGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTANGGGCGCCAGATATGGCGTTGG > SRR4302540.272851/1‑94 (MQ=60)
AAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAA > SRR4302540.5335190/1‑94 (MQ=60)
AAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAA > SRR4302540.5535806/1‑94 (MQ=60)
AATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAG < SRR4302540.7803595/94‑1 (MQ=60)
AATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAG < SRR4302540.7803596/94‑1 (MQ=60)
AATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAG > SRR4302540.8098510/1‑94 (MQ=60)
TCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGC < SRR4302540.6178669/94‑1 (MQ=60)
TCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGC > SRR4302540.8589264/1‑94 (MQ=60)
AGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAA > SRR4302540.7297354/1‑94 (MQ=60)
AACTCGCAACCTTCGGCGCTCACCACCGGATAAACGGGCAGAGGGGTGGTCATGGATGTGTATGGGTGCCAGATATGGCGgtggcgaaaggcag > SRR4302540.1386688/1‑80 (MQ=60)
GCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAG < SRR4302540.1571200/94‑1 (MQ=60)
TCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGAT > SRR4302540.4496776/1‑94 (MQ=60)
TCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGAT > SRR4302540.2106284/1‑94 (MQ=60)
TCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGAT < SRR4302540.8564456/94‑1 (MQ=60)
TCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGAT > SRR4302540.1078367/1‑94 (MQ=60)
CGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATC < SRR4302540.4354785/94‑1 (MQ=60)
CGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATC > SRR4302540.5641929/1‑94 (MQ=60)
CGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATC > SRR4302540.8582108/1‑94 (MQ=60)
GCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCG > SRR4302540.6957162/1‑94 (MQ=60)
GCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCG < SRR4302540.8513823/94‑1 (MQ=60)
GCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCG > SRR4302540.1539383/1‑94 (MQ=60)
AACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTC > SRR4302540.1274739/1‑94 (MQ=60)
AACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTC > SRR4302540.1274740/1‑94 (MQ=60)
AACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTC > SRR4302540.6037354/1‑94 (MQ=60)
AACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTC > SRR4302540.155730/1‑94 (MQ=60)
AACCTGCGGGGCTCCCCGCCGGACAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTC < SRR4302540.3492138/94‑1 (MQ=60)
ACCTTCGGCGCTCACCACCGGATAAACCGGCTGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCG > SRR4302540.3308414/1‑94 (MQ=60)
ACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCC < SRR4302540.8194357/94‑1 (MQ=60)
ACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCC < SRR4302540.6502219/94‑1 (MQ=60)
CTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGT > SRR4302540.4014772/1‑94 (MQ=60)
CTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGGCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGT > SRR4302540.4231469/1‑94 (MQ=60)
CGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGT < SRR4302540.8842004/94‑1 (MQ=60)
GGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTC > SRR4302540.1388318/1‑94 (MQ=60)
CGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGTCGTTGGTCAAAGGCAAGATCGTCCGTTGTCAT < SRR4302540.3621674/94‑1 (MQ=60)
CTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAA > SRR4302540.5060365/1‑94 (MQ=60)
CTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGCACGTTGTCATAA > SRR4302540.1389087/1‑94 (MQ=60)
TCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAAT > SRR4302540.7485947/1‑94 (MQ=60)
TCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAAT > SRR4302540.7485949/1‑94 (MQ=60)
TCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAAT > SRR4302540.9853617/1‑94 (MQ=60)
CACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATC < SRR4302540.5420978/94‑1 (MQ=60)
CACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATC < SRR4302540.10056456/94‑1 (MQ=60)
CACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGGATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATC < SRR4302540.7932537/94‑1 (MQ=60)
ACCACCGGATAAACCGGCAGANGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCG < SRR4302540.1836129/94‑1 (MQ=60)
CCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGA > SRR4302540.809586/1‑94 (MQ=60)
CCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGA > SRR4302540.271878/1‑94 (MQ=60)
CACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGAC > SRR4302540.9650279/1‑94 (MQ=60)
acagggtgaagcgcgcggggtggtgtcaaGGATGTGTATGGGCGCCAGATATGGCGTTGGTAAAAGGCAAGATCGTCCGTTGTCATAATCGACT < SRR4302540.7697841/65‑1 (MQ=60)
CCCGGATAACCCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACT < SRR4302540.6067860/94‑1 (MQ=60)
ACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACT < SRR4302540.6067862/94‑1 (MQ=60)
ACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACT < SRR4302540.7697840/94‑1 (MQ=60)
CCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTT < SRR4302540.6876552/94‑1 (MQ=60)
CCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTT > SRR4302540.7090783/1‑94 (MQ=60)
ACGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTT < SRR4302540.3847697/94‑1 (MQ=60)
CGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTG > SRR4302540.9717460/1‑94 (MQ=60)
CGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTG > SRR4302540.4253936/1‑94 (MQ=60)
GGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGT > SRR4302540.5583108/1‑94 (MQ=60)
GGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGT < SRR4302540.4284541/94‑1 (MQ=60)
GGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGT > SRR4302540.8726316/1‑94 (MQ=60)
ATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAA < SRR4302540.5779269/94‑1 (MQ=60)
AAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAAC < SRR4302540.5516261/94‑1 (MQ=60)
AAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAAC > SRR4302540.8200623/1‑94 (MQ=60)
AAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAAC > SRR4302540.5065029/1‑94 (MQ=60)
AACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACC < SRR4302540.9544555/94‑1 (MQ=60)
AACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACC < SRR4302540.2398781/94‑1 (MQ=60)
AACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACC > SRR4302540.5344263/1‑94 (MQ=60)
AACCGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACC < SRR4302540.5857717/94‑1 (MQ=60)
CGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAA > SRR4302540.6684174/1‑94 (MQ=60)
CGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAA < SRR4302540.9230430/94‑1 (MQ=60)
CGGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAA > SRR4302540.7291133/1‑94 (MQ=60)
GGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAAT > SRR4302540.6577368/1‑94 (MQ=60)
GGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAAT > SRR4302540.295527/1‑94 (MQ=60)
GGCAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAAT > SRR4302540.2754724/1‑94 (MQ=60)
CAGAGGGGAGTTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTG < SRR4302540.6768362/94‑1 (MQ=60)
CAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTG < SRR4302540.9752605/94‑1 (MQ=60)
CAGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTG < SRR4302540.6938501/94‑1 (MQ=60)
AGAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGA > SRR4302540.8312769/1‑94 (MQ=60)
GAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAA > SRR4302540.8984806/1‑94 (MQ=60)
GAGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAA < SRR4302540.7950961/94‑1 (MQ=60)
AGGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAA < SRR4302540.9362592/94‑1 (MQ=60)
GGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAA < SRR4302540.268337/94‑1 (MQ=60)
GGGGAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAA > SRR4302540.9997794/1‑94 (MQ=60)
GGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAG < SRR4302540.2910776/94‑1 (MQ=60)
GGGGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGA > SRR4302540.3730988/1‑94 (MQ=60)
GGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGA < SRR4302540.2177181/94‑1 (MQ=60)
GAGGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGAT > SRR4302540.9008390/1‑94 (MQ=60)
GGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTT > SRR4302540.1349922/1‑94 (MQ=60)
GGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTT < SRR4302540.751823/94‑1 (MQ=60)
GGTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTT > SRR4302540.2797842/1‑94 (MQ=60)
GGTCATGGATGTGTAGGGGTGCAAGATATGGCGTT‑GTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTA < SRR4302540.6002163/94‑1 (MQ=60)
GTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTA < SRR4302540.3909784/94‑1 (MQ=60)
GTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTA > SRR4302540.219722/1‑94 (MQ=60)
GTCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTA < SRR4302540.1444128/94‑1 (MQ=60)
TCATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAG < SRR4302540.2580944/94‑1 (MQ=60)
CATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGG > SRR4302540.761712/1‑94 (MQ=60)
CATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGG < SRR4302540.1220672/94‑1 (MQ=60)
ATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGCCTTGTACACCAAATTGAAAAGATTTAGGT > SRR4302540.6199583/1‑94 (MQ=60)
ATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGT > SRR4302540.6199582/1‑94 (MQ=60)
ATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGT > SRR4302540.9720544/1‑94 (MQ=60)
ATGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGT > SRR4302540.5839584/1‑94 (MQ=60)
TGGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTT < SRR4302540.8979983/94‑1 (MQ=60)
GGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTT > SRR4302540.9806399/1‑94 (MQ=60)
GGATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTT < SRR4302540.7250421/94‑1 (MQ=60)
GATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTA > SRR4302540.8997233/1‑94 (MQ=60)
ATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTAC > SRR4302540.1163475/1‑94 (MQ=60)
ATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTAC > SRR4302540.2271385/1‑94 (MQ=60)
ATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTAC > SRR4302540.1163474/1‑94 (MQ=60)
ATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTAC > SRR4302540.6395624/1‑94 (MQ=60)
ATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTAC < SRR4302540.3146650/94‑1 (MQ=60)
ATGTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTAC < SRR4302540.4731740/94‑1 (MQ=60)
TGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACA < SRR4302540.3216022/94‑1 (MQ=60)
GTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAA > SRR4302540.3420655/1‑94 (MQ=60)
GTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAA > SRR4302540.138998/1‑94 (MQ=60)
GTGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAA > SRR4302540.8537306/1‑94 (MQ=60)
TGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAG > SRR4302540.2651908/1‑94 (MQ=60)
TGTATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAG > SRR4302540.2651909/1‑94 (MQ=60)
ATGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAGTCT < SRR4302540.7080511/94‑1 (MQ=60)
TGGGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAGTCTA > SRR4302540.6100350/1‑94 (MQ=60)
GGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAGTCTACA < SRR4302540.7030308/94‑1 (MQ=60)
GGCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAGTCTACA < SRR4302540.4736250/94‑1 (MQ=60)
GCGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAGTCTACAC < SRR4302540.8724337/94‑1 (MQ=60)
TGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAGTCTACACC < SRR4302540.1470082/94‑1 (MQ=60)
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CCAGGCGTCTGCCGTCAGACAAAATCAGCTCGCAACCTTCGGCGCTCACCACCGGATAAACCGGCAGAGGGGAGGTCATGGATGTGTATGGGTGCCAGATATGGCGTTGGTCAAAGGCAAGATCGTCCGTTGTCATAATCGACTTGTAAACCAAATTGAAAAGATTTAGGTTTACAAGTCTACACC > NC_000913/808345‑808530
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
