Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCACATGCAGACAGGTTTCTACCGCAGTATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCACT > NC_000913/862244‑862429
|
GGCACATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCC < SRR4302540.3156881/94‑1 (MQ=60)
CACATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCC > SRR4302540.1944656/1‑94 (MQ=60)
CACATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCA > SRR4302540.5204287/1‑94 (MQ=60)
CACATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCA > SRR4302540.3287937/1‑94 (MQ=60)
CACATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCA < SRR4302540.8897119/94‑1 (MQ=60)
ACATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCAC < SRR4302540.2855279/94‑1 (MQ=60)
CATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACC < SRR4302540.956902/94‑1 (MQ=60)
ATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCA < SRR4302540.1564306/94‑1 (MQ=60)
CAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCC > SRR4302540.3147023/1‑94 (MQ=60)
AGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCA > SRR4302540.8313287/1‑94 (MQ=60)
GACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGA > SRR4302540.271793/1‑94 (MQ=60)
ACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAA > SRR4302540.8038740/1‑94 (MQ=60)
AGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAG > SRR4302540.2972876/1‑94 (MQ=60)
AGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAG > SRR4302540.7667363/1‑94 (MQ=60)
GGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGC > SRR4302540.3230708/1‑94 (MQ=60)
GGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGC > SRR4302540.6652879/1‑94 (MQ=60)
TTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGT < SRR4302540.9998059/94‑1 (MQ=60)
TTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGT < SRR4302540.786289/94‑1 (MQ=60)
TCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTA > SRR4302540.8172317/1‑94 (MQ=60)
TCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTA > SRR4302540.9146152/1‑94 (MQ=60)
TCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTA < SRR4302540.1344426/94‑1 (MQ=60)
CTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAA > SRR4302540.1760650/1‑94 (MQ=60)
CTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAA > SRR4302540.9576956/1‑94 (MQ=60)
TACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGTATAAAGGGCCCACCACCCGAAAGCGTTAAA < SRR4302540.10116117/94‑1 (MQ=60)
TACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAA < SRR4302540.5510636/94‑1 (MQ=60)
TACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAA > SRR4302540.3314307/1‑94 (MQ=60)
TACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAA < SRR4302540.9981362/94‑1 (MQ=60)
TACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAA < SRR4302540.10116116/94‑1 (MQ=60)
ACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAC > SRR4302540.7540237/1‑94 (MQ=60)
CCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACC < SRR4302540.8419251/94‑1 (MQ=60)
CGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCG > SRR4302540.589236/1‑94 (MQ=60)
CGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCG < SRR4302540.8176900/94‑1 (MQ=60)
CAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCC < SRR4302540.8442573/94‑1 (MQ=60)
CAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCC < SRR4302540.8442572/94‑1 (MQ=60)
CAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCC < SRR4302540.10126621/94‑1 (MQ=60)
CAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCC < SRR4302540.1866626/94‑1 (MQ=60)
CAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCC < SRR4302540.6056351/94‑1 (MQ=60)
CAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCC < SRR4302540.3099574/94‑1 (MQ=60)
GCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGC > SRR4302540.8155288/1‑94 (MQ=60)
GCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGC < SRR4302540.4467126/94‑1 (MQ=60)
ATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCG > SRR4302540.9994979/1‑94 (MQ=60)
ATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCG < SRR4302540.9283505/94‑1 (MQ=60)
ATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCG > SRR4302540.360081/1‑94 (MQ=60)
ATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAAGGCCCACCACCCGAAAGCGTTAAACCGCCGCCG > SRR4302540.8662513/1‑94 (MQ=60)
GAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCT < SRR4302540.3824284/94‑1 (MQ=60)
GAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCT < SRR4302540.5495364/94‑1 (MQ=60)
GAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCT < SRR4302540.5495363/94‑1 (MQ=60)
GAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCC > SRR4302540.2981974/1‑94 (MQ=60)
AATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTG < SRR4302540.1721528/94‑1 (MQ=60)
ATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGC < SRR4302540.7551141/94‑1 (MQ=60)
ATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGC > SRR4302540.2088241/1‑94 (MQ=60)
GCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGA < SRR4302540.7912711/94‑1 (MQ=60)
CCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGAT < SRR4302540.2453047/94‑1 (MQ=60)
CCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGAT < SRR4302540.9331140/94‑1 (MQ=60)
TGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCG < SRR4302540.5832180/94‑1 (MQ=60)
TGCCCCGTGGCTGGCTTGCCGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCG < SRR4302540.8799902/94‑1 (MQ=60)
CTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAA > SRR4302540.3700583/1‑94 (MQ=60)
TCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAA < SRR4302540.2225183/94‑1 (MQ=60)
TCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAA > SRR4302540.6373114/1‑94 (MQ=60)
TCGTGGCTGGCTGGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAA < SRR4302540.6123433/94‑1 (MQ=60)
CGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAA < SRR4302540.2998081/94‑1 (MQ=60)
GTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAAC < SRR4302540.1579820/94‑1 (MQ=60)
GTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAAC < SRR4302540.4690570/94‑1 (MQ=60)
TGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACG < SRR4302540.6168605/94‑1 (MQ=60)
TGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACG > SRR4302540.4228894/1‑94 (MQ=60)
TGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTT < SRR4302540.3108357/94‑1 (MQ=60)
TGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTT > SRR4302540.6505016/1‑94 (MQ=60)
TGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTT < SRR4302540.75091/94‑1 (MQ=60)
gcttgcagtacccccgtgcCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTAT < SRR4302540.8096083/75‑1 (MQ=60)
GCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTAT > SRR4302540.1590148/1‑94 (MQ=60)
GCGTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTAT < SRR4302540.5062018/94‑1 (MQ=60)
CTTGCAGTAGCGCCATCTCAATTTCCGGCGGCATAAAGTGTCCACCACCCTAAAGCGTGAAGCCGCCGCCGCTGCGATCGTAAAACGGTTTATC < SRR4302540.8466519/94‑1 (MQ=53)
CTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATC > SRR4302540.5208091/1‑94 (MQ=60)
CTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATC < SRR4302540.1889851/94‑1 (MQ=60)
CTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATC < SRR4302540.869029/94‑1 (MQ=60)
CTTGCAGTAGCGCCATCACCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAAACGCCGCCGCTGCGATCGTAAAACGGTTTATC > SRR4302540.5208092/1‑94 (MQ=60)
TTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCG < SRR4302540.6608547/94‑1 (MQ=60)
TTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCG < SRR4302540.2234717/94‑1 (MQ=60)
TTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCG < SRR4302540.6883751/94‑1 (MQ=60)
TGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGC < SRR4302540.6934938/94‑1 (MQ=60)
GTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGACGCTGCGATCGTAAAACGGTTTATCGCGCAG > SRR4302540.1366429/1‑94 (MQ=60)
GTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAG < SRR4302540.2135566/94‑1 (MQ=60)
TAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGA < SRR4302540.5632720/94‑1 (MQ=60)
TGCGCCATCGCCATTTCCGCCTGCATAAAGGCCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAA < SRR4302540.3715563/94‑1 (MQ=60)
AGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAA < SRR4302540.4091694/94‑1 (MQ=60)
GCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAAC < SRR4302540.3870181/94‑1 (MQ=60)
CGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACG < SRR4302540.8373913/94‑1 (MQ=60)
CGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACG < SRR4302540.4029462/94‑1 (MQ=60)
CGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACG > SRR4302540.7332541/1‑94 (MQ=60)
CGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACG < SRR4302540.8752538/94‑1 (MQ=60)
GCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGG < SRR4302540.9568588/94‑1 (MQ=60)
CCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGT > SRR4302540.5299254/1‑94 (MQ=60)
CCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGT > SRR4302540.6842887/1‑94 (MQ=60)
CCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGC > SRR4302540.3418929/1‑94 (MQ=60)
CATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTC < SRR4302540.6416536/94‑1 (MQ=60)
CATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTC < SRR4302540.6979233/94‑1 (MQ=60)
CATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTC > SRR4302540.8976721/1‑94 (MQ=60)
CATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTC < SRR4302540.770550/94‑1 (MQ=60)
CATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTC > SRR4302540.7999623/1‑94 (MQ=60)
CTCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCG < SRR4302540.690539/94‑1 (MQ=60)
ATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCG > SRR4302540.8749307/1‑94 (MQ=60)
ATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCG > SRR4302540.6286430/1‑94 (MQ=60)
CGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTC > SRR4302540.5159317/1‑94 (MQ=60)
CGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTC > SRR4302540.5587627/1‑94 (MQ=60)
CCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCAT > SRR4302540.5079305/1‑94 (MQ=60)
CCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCAT < SRR4302540.7081773/94‑1 (MQ=60)
CATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATG > SRR4302540.6152750/1‑94 (MQ=60)
CATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATG > SRR4302540.5333122/1‑94 (MQ=60)
ATTTCCGGCTGCATAAAGGGCTCACCAGCCGAAAGCGTTAAACCGGCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGA < SRR4302540.5043829/94‑1 (MQ=60)
ATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGT > SRR4302540.7802352/1‑94 (MQ=60)
ATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGA > SRR4302540.2604582/1‑94 (MQ=60)
TTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAT < SRR4302540.6797408/94‑1 (MQ=60)
TTTCCGGCTGCATAAAGGGCCCCCCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAT < SRR4302540.8425472/94‑1 (MQ=60)
TTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAT < SRR4302540.5990573/94‑1 (MQ=60)
TTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAT < SRR4302540.1652972/94‑1 (MQ=60)
TTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATC < SRR4302540.8408659/94‑1 (MQ=60)
TCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCT < SRR4302540.4765569/94‑1 (MQ=60)
TCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGACCT > SRR4302540.6310364/1‑94 (MQ=60)
CGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCC < SRR4302540.6052393/94‑1 (MQ=60)
CGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCC > SRR4302540.8676644/1‑94 (MQ=60)
GGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCT > SRR4302540.4572353/1‑94 (MQ=60)
GGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCT > SRR4302540.4522787/1‑94 (MQ=60)
GGCTGCATAAAGGGCCCACCCCCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCT < SRR4302540.1636169/94‑1 (MQ=60)
TGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAA > SRR4302540.2902705/1‑94 (MQ=60)
GCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAAC < SRR4302540.1703148/94‑1 (MQ=60)
GCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAAC > SRR4302540.9630601/1‑94 (MQ=60)
CATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACG < SRR4302540.10037918/94‑1 (MQ=60)
CATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACG < SRR4302540.5056531/94‑1 (MQ=60)
CATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACG > SRR4302540.7236023/1‑94 (MQ=60)
ATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTGAAACGGTTGATCGCGCCGCCCGGTCGTCATGATCctctcagcgc > SRR4302540.6984148/1‑84 (MQ=60)
ATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGC > SRR4302540.2252166/1‑94 (MQ=60)
TAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCT > SRR4302540.584717/1‑94 (MQ=60)
AAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTT > SRR4302540.2114797/1‑94 (MQ=60)
AAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTT > SRR4302540.826589/1‑94 (MQ=60)
AGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTT > SRR4302540.5434659/1‑94 (MQ=60)
GGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTC < SRR4302540.8898936/94‑1 (MQ=60)
GGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTC < SRR4302540.8898937/94‑1 (MQ=60)
GGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTC > SRR4302540.3021968/1‑94 (MQ=60)
GGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCA < SRR4302540.9640710/94‑1 (MQ=60)
GNNCNNNANNCGAAAGCNTNNNNCNNCCGCCGCTGCGATCGTAAAACGGTTTATCGCGNAGAACGGTCGTCATGATCTCCTCAACGCTTTTCAC < SRR4302540.281065/94‑1 (MQ=60)
GCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCAC < SRR4302540.6419954/94‑1 (MQ=60)
GCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCAC < SRR4302540.6687265/94‑1 (MQ=60)
CCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCACT < SRR4302540.2600202/94‑1 (MQ=60)
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GGCACATGCAGACAGGTTTCTACCGCAGTATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCACT > NC_000913/862244‑862429
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
