Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
862,337 |
T→C |
E142G (GAG→GGG) |
ybiY ← |
putative pyruvate formate‑lyase activating enzyme 2 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 862,337 | 0 | T | C | 100.0%
| 497.6
/ NA
| 160 | E142G (GAG→GGG) | ybiY | putative pyruvate formate‑lyase activating enzyme 2 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (81/79); total (81/79) |
Only 100 of 167 total aligned reads displayed.
CATGCAGACAGGTTTCTACCGCAGTATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTC > NC_000913/862248‑862426
|
caTGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTACGGCTGCATAAAGGGCCcac > 2:4805634/1‑93 (MQ=255)
aGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCAccc < 2:499345/93‑1 (MQ=255)
gACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCg > 1:3528930/1‑93 (MQ=255)
gACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCg > 2:2622913/1‑93 (MQ=255)
gACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCg > 2:5585118/1‑93 (MQ=255)
cAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGaa < 2:843879/93‑1 (MQ=255)
cAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGaa > 2:3461505/1‑93 (MQ=255)
cAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGaa > 2:1511866/1‑93 (MQ=255)
aGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGaaa > 1:1278597/1‑93 (MQ=255)
aGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGaaa < 2:5705741/93‑1 (MQ=255)
aGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGaaa < 1:6021442/93‑1 (MQ=255)
ggTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAg > 1:3247538/1‑93 (MQ=255)
ggTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAg > 2:4687279/1‑93 (MQ=255)
ggTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAg < 1:1843666/93‑1 (MQ=255)
ggTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAg > 2:4285701/1‑93 (MQ=255)
cTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTa > 2:2345440/1‑93 (MQ=255)
cTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTa < 1:427572/93‑1 (MQ=255)
tACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTaa > 2:4442556/1‑93 (MQ=255)
aCCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTaaa < 2:4366653/93‑1 (MQ=255)
aCCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTaaa < 2:2750998/93‑1 (MQ=255)
cGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAcc > 1:5154777/1‑93 (MQ=255)
cGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGAGTTAAAcc > 2:2159211/1‑93 (MQ=255)
gcagcaTGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAccg > 1:5892230/1‑93 (MQ=255)
cAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAccgc > 1:5446190/1‑93 (MQ=255)
agcaTGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAccgcc > 1:6061602/4‑93 (MQ=255)
caTGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAccgccgc < 1:3722772/92‑1 (MQ=255)
caTGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAccgccgc > 1:3990493/2‑93 (MQ=255)
aTGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAccgccgcc > 1:1645746/1‑93 (MQ=255)
gAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACcgccgccgc < 1:1279188/93‑1 (MQ=255)
aaTGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCt > 1:4415814/1‑93 (MQ=255)
tgcctgccTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGc < 2:2574557/93‑1 (MQ=255)
tgcctgccTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGc < 1:2322316/93‑1 (MQ=255)
ctgcctCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGAt < 1:2977327/93‑1 (MQ=255)
ctgcctCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGAt < 1:2129460/93‑1 (MQ=255)
tgcctCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATc > 2:3467397/1‑93 (MQ=255)
cctCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGt > 1:3167376/1‑93 (MQ=255)
cctCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGt > 1:4667364/1‑93 (MQ=255)
cctCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGt > 1:5008418/1‑93 (MQ=255)
cctCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGt < 2:4819357/93‑1 (MQ=255)
ctCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTa > 1:4312141/1‑93 (MQ=255)
tCGTGGCTGGGTTGCAGTAGCGCCTTCGCCATTTCCGGCCGCATAAAGGGGCCATCACCCGAAAGCGTTAAATCGCCGCCGCTGCGGTCGTaa > 2:4065955/1‑93 (MQ=255)
tCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTaa < 1:1045994/93‑1 (MQ=255)
cGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTaaa < 1:1847388/93‑1 (MQ=255)
gttgctggctTGCAGGAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGAGCGTaaaa > 2:4535732/4‑93 (MQ=255)
tggctggcTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAAc < 2:2641711/93‑1 (MQ=255)
ggctggctTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACg < 1:6234205/93‑1 (MQ=255)
gctggctTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACgg > 1:606911/1‑93 (MQ=255)
tggctTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGtt < 2:1004485/93‑1 (MQ=255)
tggctTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGtt > 1:2487949/1‑93 (MQ=255)
gctTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTa > 1:4157638/1‑93 (MQ=255)
ctTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAACACGGTTTAt > 1:2086838/1‑93 (MQ=255)
ctTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTAt < 1:2696592/93‑1 (MQ=255)
ttGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATc < 1:253532/93‑1 (MQ=255)
ttGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATc < 1:1208962/93‑1 (MQ=255)
cAGTAGCGCCATCCCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATcgcg < 1:4056912/93‑1 (MQ=255)
aGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCgcgc < 2:5886547/93‑1 (MQ=255)
gTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCa > 1:761563/1‑93 (MQ=255)
gTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGCTTATCGCGCa > 1:6309974/1‑93 (MQ=255)
tAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAg < 1:3507742/93‑1 (MQ=255)
aGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTCCGATCGTAAAACGGTTTATCGCGCaca > 1:1325420/1‑91 (MQ=255)
gcgcCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGaa < 2:3668638/93‑1 (MQ=255)
gcgcCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGaa < 2:3018075/93‑1 (MQ=255)
gccatcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACg < 1:1881643/93‑1 (MQ=255)
ccatcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACgg < 2:2584101/93‑1 (MQ=255)
ccatcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACgg > 2:5324664/1‑93 (MQ=255)
ccatcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATAGCGCAGAACgg > 2:1942266/1‑93 (MQ=255)
catcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgt > 2:2558624/1‑93 (MQ=255)
catcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgt < 2:4657314/93‑1 (MQ=255)
catcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgt < 2:5160887/93‑1 (MQ=255)
atcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtc < 2:175242/93‑1 (MQ=255)
atcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtc > 2:513433/1‑93 (MQ=255)
atcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtc > 2:5384665/1‑93 (MQ=255)
atcgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtc > 2:3601470/1‑93 (MQ=255)
cgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtcgt < 1:79420/93‑1 (MQ=255)
cgccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtcgt > 2:3530582/1‑93 (MQ=255)
gccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtcgtc > 1:728727/1‑93 (MQ=255)
gccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtcgtc < 1:1738738/93‑1 (MQ=255)
gccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtcgtc > 1:5578572/1‑93 (MQ=255)
gccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGgtcgtc < 1:652439/93‑1 (MQ=255)
ccatTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCa < 2:2411436/93‑1 (MQ=255)
atTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATg > 1:1539903/1‑93 (MQ=255)
tttCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGa < 1:5261326/93‑1 (MQ=255)
tttCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGa < 2:4321197/93‑1 (MQ=255)
tttCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGCTTATCGCGCAGAACGGTCGTCATGa > 1:2648918/1‑93 (MQ=255)
tCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAtc > 1:1093400/1‑93 (MQ=255)
tCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAtc < 1:3232405/93‑1 (MQ=255)
ccGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAtct < 2:1838983/93‑1 (MQ=255)
cGGCTGCATAAAGGGCCCACCGCCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAtctc < 2:2630832/93‑1 (MQ=255)
ggCTTCATAAAGAGCCCCCCACCCGAAAGCGTTAAGCCGCCGCCGCTGCCATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATctcc < 2:2083242/93‑1 (MQ=255)
ggCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATctcc < 2:2182423/93‑1 (MQ=255)
cTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATctcctc < 1:3738628/93‑1 (MQ=255)
cTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATctcctc > 2:4674808/1‑93 (MQ=255)
tGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCa > 2:4179229/1‑93 (MQ=255)
gCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCaa < 1:4578008/93‑1 (MQ=255)
gCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCaa > 2:5658238/1‑93 (MQ=255)
cATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAAc < 2:1980367/93‑1 (MQ=255)
cATAAAGGGCCCACCACCCGAAAGAGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAAc > 2:52916/1‑93 (MQ=255)
tAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGc < 1:5698251/93‑1 (MQ=255)
aaaGGGCCCACCACCCGAAAGCGTTAACCCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCt < 1:2782404/93‑1 (MQ=255)
aaaGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCt > 1:3400598/1‑93 (MQ=255)
|
CATGCAGACAGGTTTCTACCGCAGTATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTC > NC_000913/862248‑862426
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACATGCAGACAGGTTTCTACCGCAGTATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCACTT > NC_000913/862246‑862430
|
CACATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCA < SRR4302533.2674812/94‑1 (MQ=60)
ACATGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCAC > SRR4302533.5173365/1‑94 (MQ=60)
TGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCAC < SRR4302533.3861984/94‑1 (MQ=60)
TGCAGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCAC > SRR4302533.755065/1‑94 (MQ=60)
AGACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCG > SRR4302533.3550678/1‑94 (MQ=60)
ACAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAA > SRR4302533.1663120/1‑94 (MQ=60)
CAGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAA > SRR4302533.1286282/1‑94 (MQ=60)
AGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAG < SRR4302533.6057932/94‑1 (MQ=60)
AGGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAG > SRR4302533.3267567/1‑94 (MQ=60)
GGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGC < SRR4302533.1854914/94‑1 (MQ=60)
GGTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGC > SRR4302533.1767757/1‑94 (MQ=60)
GTTTCTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCG > SRR4302533.5936506/1‑94 (MQ=60)
CTACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAA < SRR4302533.430124/94‑1 (MQ=60)
ACCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAAC > SRR4302533.3254504/1‑94 (MQ=60)
CCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACC < SRR4302533.607866/94‑1 (MQ=60)
CCGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACC > SRR4302533.5185906/1‑94 (MQ=60)
CGCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCG > SRR4302533.5927820/1‑94 (MQ=60)
GCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGC < SRR4302533.3366268/94‑1 (MQ=60)
GCAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGC > SRR4302533.5478999/1‑94 (MQ=60)
CAGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCC > SRR4302533.6098297/1‑94 (MQ=60)
AGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCG > SRR4302533.1890947/1‑94 (MQ=60)
AGCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCG > SRR4302533.4201963/1‑94 (MQ=60)
GCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGC > SRR4302533.4014796/1‑94 (MQ=60)
GCATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGC < SRR4302533.2330665/94‑1 (MQ=60)
CATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCC > SRR4302533.1655710/1‑94 (MQ=60)
CATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCC < SRR4302533.3745616/94‑1 (MQ=60)
CATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCC < SRR4302533.1182210/94‑1 (MQ=60)
GAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCT < SRR4302533.1286877/94‑1 (MQ=60)
GAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCT > SRR4302533.30502/1‑94 (MQ=60)
GAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCT > SRR4302533.4442480/1‑94 (MQ=60)
TGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCG < SRR4302533.2336689/94‑1 (MQ=60)
GCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGA < SRR4302533.2360026/94‑1 (MQ=60)
CCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGAT < SRR4302533.3840747/94‑1 (MQ=60)
CTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGGCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATC > SRR4302533.5525527/1‑94 (MQ=60)
CTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATC < SRR4302533.2142593/94‑1 (MQ=60)
CTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATC < SRR4302533.2995542/94‑1 (MQ=60)
CTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGAGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATC > SRR4302533.1941835/1‑94 (MQ=60)
GCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGT > SRR4302533.4695642/1‑94 (MQ=60)
GCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGT > SRR4302533.5038765/1‑94 (MQ=60)
GCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGT > SRR4302533.3186866/1‑94 (MQ=60)
CCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTA > SRR4302533.4338100/1‑94 (MQ=60)
CTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGCTCGTAA > SRR4302533.6276712/1‑94 (MQ=60)
CTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGCACCCACCACCCGAAAGCGATAAACAACCGCCGCTGCGATCGTAA > SRR4302533.5361083/1‑94 (MQ=60)
TCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAA < SRR4302533.1052142/94‑1 (MQ=60)
CGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAA < SRR4302533.1858652/94‑1 (MQ=60)
GTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAAC < SRR4302533.1528428/94‑1 (MQ=60)
GGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGG > SRR4302533.610481/1‑94 (MQ=60)
GGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGG < SRR4302533.6271530/94‑1 (MQ=60)
GGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGG > SRR4302533.27004/1‑94 (MQ=60)
GTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTT < SRR4302533.6195325/94‑1 (MQ=60)
CTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTT > SRR4302533.2503272/1‑94 (MQ=60)
GGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTA > SRR4302533.4182830/1‑94 (MQ=60)
GCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAACACGGTTTAT > SRR4302533.2099689/1‑94 (MQ=60)
GCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTAT < SRR4302533.1313589/94‑1 (MQ=60)
CTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATC < SRR4302533.2713117/94‑1 (MQ=60)
TTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCG < SRR4302533.1216223/94‑1 (MQ=60)
TTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCG < SRR4302533.5270914/94‑1 (MQ=60)
TTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCG < SRR4302533.255088/94‑1 (MQ=60)
TTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCG < SRR4302533.2893033/94‑1 (MQ=60)
TGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGC < SRR4302533.86573/94‑1 (MQ=60)
GCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCG > SRR4302533.4589392/1‑94 (MQ=60)
CAGTAGCGCCATCCCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGC < SRR4302533.4081609/94‑1 (MQ=60)
AGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCA > SRR4302533.766045/1‑94 (MQ=60)
AGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGCTTATCGCGCA > SRR4302533.6347948/1‑94 (MQ=60)
TAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGA < SRR4302533.3529372/94‑1 (MQ=60)
TAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTCCGATCGTAAAACGGTTTATCGCGCACA > SRR4302533.1333371/1‑94 (MQ=60)
AGCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAA > SRR4302533.353429/1‑94 (MQ=60)
GCGCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAAC < SRR4302533.4616963/94‑1 (MQ=60)
GCCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGG < SRR4302533.1893100/94‑1 (MQ=60)
CCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGT < SRR4302533.2638054/94‑1 (MQ=60)
CCATCGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGT > SRR4302533.4325870/1‑94 (MQ=60)
CGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTC < SRR4302533.79927/94‑1 (MQ=60)
CGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTC > SRR4302533.733030/1‑94 (MQ=60)
CGCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTC > SRR4302533.5612286/1‑94 (MQ=60)
GCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCA < SRR4302533.656292/94‑1 (MQ=60)
GCCATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCA < SRR4302533.1749283/94‑1 (MQ=60)
CATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATG > SRR4302533.1549177/1‑94 (MQ=60)
ATTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGCTTATCGCGCAGAACGGTCGTCATGA > SRR4302533.2665192/1‑94 (MQ=60)
TTTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGAT < SRR4302533.5292913/94‑1 (MQ=60)
TTCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATC > SRR4302533.1099869/1‑94 (MQ=60)
TCCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCT < SRR4302533.3252323/94‑1 (MQ=60)
CCGGCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTC > SRR4302533.405137/1‑94 (MQ=60)
GCTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTC < SRR4302533.3584862/94‑1 (MQ=60)
CTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCA > SRR4302533.5615746/1‑94 (MQ=60)
CTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCA < SRR4302533.3761556/94‑1 (MQ=60)
CTGCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCA < SRR4302533.718764/94‑1 (MQ=60)
GCATAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAAC < SRR4302533.4605754/94‑1 (MQ=60)
TAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCT < SRR4302533.5732669/94‑1 (MQ=60)
TAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCT > SRR4302533.3421593/1‑94 (MQ=60)
TAAAGGGCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCT < SRR4302533.1235450/94‑1 (MQ=60)
AAAGGGCCCACCACCCGAAAGCGTTAACCCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTT < SRR4302533.2799498/94‑1 (MQ=60)
GCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCAC > SRR4302533.6261548/1‑94 (MQ=60)
GCCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCAC < SRR4302533.1226911/94‑1 (MQ=60)
CCCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCACT > SRR4302533.4540407/1‑94 (MQ=60)
CCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCACTT < SRR4302533.244530/94‑1 (MQ=60)
|
CACATGCAGACAGGTTTCTACCGCAGTATGAATGCCTGCCTCGTGGCTGGCTTGCAGTAGCGCCATCGCCATTTCCGGCTGCATAAAGGGCTCACCACCCGAAAGCGTTAAACCGCCGCCGCTGCGATCGTAAAACGGTTTATCGCGCAGAACGGTCGTCATGATCTCCTCAACGCTTTTCACTT > NC_000913/862246‑862430
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
