Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGGT > NC_000913/1458689‑1458875
|
CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCC < SRR4302540.6056056/94‑1 (MQ=60)
ACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTAC < SRR4302540.5918632/94‑1 (MQ=60)
ACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTAC < SRR4302540.2638723/94‑1 (MQ=60)
ACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCAC < SRR4302540.4474101/94‑1 (MQ=60)
ACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCAC < SRR4302540.2837828/94‑1 (MQ=60)
CGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACT > SRR4302540.4049428/1‑94 (MQ=60)
CGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACT < SRR4302540.2596156/94‑1 (MQ=60)
GCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTG < SRR4302540.6548062/94‑1 (MQ=60)
GCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTG > SRR4302540.4821740/1‑94 (MQ=60)
CCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGC > SRR4302540.307039/1‑94 (MQ=60)
CTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCG > SRR4302540.4833324/1‑94 (MQ=60)
CTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCG > SRR4302540.4543109/1‑94 (MQ=60)
TGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGC < SRR4302540.7531030/94‑1 (MQ=60)
ATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGT > SRR4302540.10066546/1‑94 (MQ=60)
AGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTAC < SRR4302540.1777372/94‑1 (MQ=60)
CCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGT > SRR4302540.3868332/1‑94 (MQ=60)
CCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGT > SRR4302540.3303537/1‑94 (MQ=60)
CCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGT > SRR4302540.1961318/1‑94 (MQ=60)
CCAGGGGCTGGAAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCGTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGT < SRR4302540.5074786/94‑1 (MQ=60)
CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTC < SRR4302540.558883/94‑1 (MQ=60)
CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTC > SRR4302540.3463371/1‑94 (MQ=60)
CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTC > SRR4302540.9671214/1‑94 (MQ=60)
AGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCA > SRR4302540.1498781/1‑94 (MQ=60)
AGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCA > SRR4302540.3831632/1‑94 (MQ=60)
AGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCA < SRR4302540.5578294/94‑1 (MQ=60)
GGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCAT < SRR4302540.9525116/94‑1 (MQ=60)
GGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATC < SRR4302540.1196159/94‑1 (MQ=60)
GGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCA < SRR4302540.2367909/94‑1 (MQ=60)
GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACCCCTTAACTGCTACTGCGCAGGTACGTCATCAG < SRR4302540.40952/94‑1 (MQ=60)
GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAG < SRR4302540.1722603/94‑1 (MQ=60)
GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAG < SRR4302540.40949/94‑1 (MQ=60)
GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAG < SRR4302540.572856/94‑1 (MQ=60)
GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCACAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAG < SRR4302540.3355718/94‑1 (MQ=60)
CTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGG > SRR4302540.1455087/1‑94 (MQ=60)
TGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGG < SRR4302540.6061725/94‑1 (MQ=60)
TGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGG > SRR4302540.875852/1‑94 (MQ=60)
CAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAA < SRR4302540.5282010/94‑1 (MQ=60)
CAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAA < SRR4302540.3855978/94‑1 (MQ=60)
AGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAG > SRR4302540.4129302/1‑94 (MQ=60)
CCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCA < SRR4302540.1892508/94‑1 (MQ=60)
CCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCA > SRR4302540.7333972/1‑94 (MQ=60)
CGTCGCTTCTGCCTGCACGATTGCTTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGCGCAAGCAA > SRR4302540.2837667/1‑94 (MQ=60)
CGTCGCTTCTGCCTGCACGATTGATTTTTTGCTCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAA > SRR4302540.7810155/1‑94 (MQ=60)
CGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAA > SRR4302540.2837668/1‑94 (MQ=60)
CGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAA > SRR4302540.8303855/1‑94 (MQ=60)
CGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAA > SRR4302540.7810159/1‑94 (MQ=60)
CGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCACGGCAACCAA > SRR4302540.8303854/1‑94 (MQ=60)
CGTTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC < SRR4302540.7202314/94‑1 (MQ=60)
CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACC < SRR4302540.2130758/94‑1 (MQ=60)
CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC > SRR4302540.8290591/1‑94 (MQ=60)
CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC > SRR4302540.1040055/1‑94 (MQ=60)
CGCGTCTGCCTGCACGAGTGAGTCTTTGCGCCCAGGCGTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACC < SRR4302540.2130759/94‑1 (MQ=60)
TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGT < SRR4302540.1702611/94‑1 (MQ=60)
TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGT < SRR4302540.9179399/94‑1 (MQ=60)
TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGT > SRR4302540.4875002/1‑94 (MQ=60)
TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGT > SRR4302540.4875003/1‑94 (MQ=60)
TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGG > SRR4302540.4875001/1‑94 (MQ=60)
TCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTG > SRR4302540.726061/1‑94 (MQ=60)
CTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGT > SRR4302540.8658618/1‑94 (MQ=60)
CTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGT > SRR4302540.6965960/1‑94 (MQ=60)
TGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTT < SRR4302540.2822927/94‑1 (MQ=60)
TGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTT > SRR4302540.2465922/1‑94 (MQ=60)
TGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTT > SRR4302540.1713274/1‑94 (MQ=60)
GCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTT > SRR4302540.1190398/1‑94 (MQ=60)
GCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTT > SRR4302540.9771189/1‑94 (MQ=60)
GCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTT < SRR4302540.1409331/94‑1 (MQ=60)
CCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTA > SRR4302540.8674346/1‑94 (MQ=60)
CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC < SRR4302540.4584277/94‑1 (MQ=60)
CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC > SRR4302540.3446789/1‑94 (MQ=60)
CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC < SRR4302540.5437717/94‑1 (MQ=60)
CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC < SRR4302540.5437718/94‑1 (MQ=60)
CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC > SRR4302540.3446790/1‑94 (MQ=60)
TGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACG < SRR4302540.7909669/94‑1 (MQ=60)
GCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGA > SRR4302540.2824803/1‑94 (MQ=60)
GCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGA > SRR4302540.8568075/1‑94 (MQ=60)
GCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGA > SRR4302540.7525440/1‑94 (MQ=60)
CACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAC < SRR4302540.1837813/94‑1 (MQ=60)
CACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAC < SRR4302540.349393/94‑1 (MQ=60)
CACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAC > SRR4302540.6452316/1‑94 (MQ=60)
CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT > SRR4302540.1337482/1‑94 (MQ=60)
CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT < SRR4302540.6518629/94‑1 (MQ=60)
CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT > SRR4302540.7079941/1‑94 (MQ=60)
GATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATC < SRR4302540.5963360/94‑1 (MQ=60)
GATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATC < SRR4302540.8643381/94‑1 (MQ=60)
GATTGATTGTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATC < SRR4302540.4395850/94‑1 (MQ=60)
ATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCG > SRR4302540.4651230/1‑94 (MQ=60)
TTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGA > SRR4302540.98829/1‑94 (MQ=60)
TTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGA < SRR4302540.1532954/94‑1 (MQ=60)
TTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGA < SRR4302540.1532953/94‑1 (MQ=60)
tgattggttgtgccgagggtgttCCGGAAACACCTTAACCGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAGCGAA < SRR4302540.6030606/71‑1 (MQ=60)
TGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAA > SRR4302540.8893791/1‑94 (MQ=60)
TGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAA < SRR4302540.6030605/94‑1 (MQ=60)
ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT > SRR4302540.8855362/1‑94 (MQ=60)
ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT < SRR4302540.10109236/94‑1 (MQ=60)
ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT > SRR4302540.3204810/1‑94 (MQ=60)
ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT > SRR4302540.3725152/1‑94 (MQ=60)
ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT > SRR4302540.8276261/1‑94 (MQ=60)
TTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT > SRR4302540.1230883/1‑94 (MQ=60)
TTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT < SRR4302540.606562/94‑1 (MQ=60)
TTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT < SRR4302540.3267966/94‑1 (MQ=60)
TTTGTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT < SRR4302540.9447865/94‑1 (MQ=60)
TTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTG < SRR4302540.8666538/94‑1 (MQ=60)
TTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTG < SRR4302540.8666537/94‑1 (MQ=60)
TTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGT < SRR4302540.3580196/94‑1 (MQ=60)
TTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTT > SRR4302540.9562762/1‑94 (MQ=60)
TGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA < SRR4302540.8282047/94‑1 (MQ=60)
TGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA < SRR4302540.8282046/94‑1 (MQ=60)
TGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA < SRR4302540.8114681/94‑1 (MQ=60)
CGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACC < SRR4302540.7182483/94‑1 (MQ=60)
GCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCA > SRR4302540.9904188/1‑94 (MQ=60)
GCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCA > SRR4302540.4292241/1‑94 (MQ=60)
GCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCA > SRR4302540.7478454/1‑94 (MQ=60)
CCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA < SRR4302540.1586439/94‑1 (MQ=60)
CCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA > SRR4302540.3461364/1‑94 (MQ=60)
CCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA > SRR4302540.7953256/1‑94 (MQ=60)
CCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA > SRR4302540.7866946/1‑94 (MQ=60)
CCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAAC > SRR4302540.5910634/1‑94 (MQ=60)
CCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAAC < SRR4302540.8312259/94‑1 (MQ=60)
CAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACA > SRR4302540.7583863/1‑94 (MQ=60)
CAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACA > SRR4302540.165726/1‑94 (MQ=60)
AGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAA < SRR4302540.4086893/94‑1 (MQ=60)
GGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAAC < SRR4302540.294119/94‑1 (MQ=60)
GGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAAA > SRR4302540.570347/1‑94 (MQ=60)
GCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACA < SRR4302540.7615337/94‑1 (MQ=60)
GCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACA < SRR4302540.9564655/94‑1 (MQ=60)
GCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACA < SRR4302540.247308/94‑1 (MQ=60)
CTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAA > SRR4302540.4441870/1‑94 (MQ=60)
CTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAA > SRR4302540.4441871/1‑94 (MQ=60)
TGCCGGAGACACCTTATCTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAA > SRR4302540.5923174/1‑94 (MQ=60)
TGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAA > SRR4302540.5464353/1‑94 (MQ=60)
TGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAA > SRR4302540.5464352/1‑94 (MQ=60)
CCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAAC > SRR4302540.1132430/1‑94 (MQ=60)
CCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAAC < SRR4302540.6361081/94‑1 (MQ=60)
GGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGG > SRR4302540.6798516/1‑94 (MQ=60)
GGAGACACATTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGG < SRR4302540.3512854/94‑1 (MQ=60)
GAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGT < SRR4302540.118780/94‑1 (MQ=60)
GACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTG < SRR4302540.9608154/94‑1 (MQ=60)
GACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTG < SRR4302540.6474433/94‑1 (MQ=60)
GACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTG < SRR4302540.8887268/94‑1 (MQ=60)
CCACCTTACCTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGC < SRR4302540.7812034/94‑1 (MQ=60)
ACTCCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGC < SRR4302540.4572592/94‑1 (MQ=60)
ACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGC < SRR4302540.2512082/94‑1 (MQ=60)
CACCTTAACTGCCACTGCGCAGGTACGTCATCATGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCG > SRR4302540.9038905/1‑94 (MQ=60)
CACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCG > SRR4302540.1181308/1‑94 (MQ=60)
ACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGC > SRR4302540.8930955/1‑94 (MQ=60)
CCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCT > SRR4302540.758359/1‑94 (MQ=60)
CCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCT > SRR4302540.8082235/1‑94 (MQ=60)
CCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCT < SRR4302540.8537576/94‑1 (MQ=60)
CTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTG > SRR4302540.8739541/1‑94 (MQ=60)
TTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGT > SRR4302540.3925443/1‑94 (MQ=60)
TTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGT > SRR4302540.8274739/1‑94 (MQ=60)
TAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTT < SRR4302540.2211332/94‑1 (MQ=60)
TAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTT < SRR4302540.8249873/94‑1 (MQ=60)
AACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTT > SRR4302540.1198331/1‑94 (MQ=60)
AACTGCGACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTT < SRR4302540.3486317/94‑1 (MQ=60)
AACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTT < SRR4302540.6390058/94‑1 (MQ=60)
ACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTC < SRR4302540.1201799/94‑1 (MQ=60)
ACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTC > SRR4302540.4154659/1‑94 (MQ=60)
CTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCG > SRR4302540.353455/1‑94 (MQ=60)
CTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTCACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCG < SRR4302540.9197571/94‑1 (MQ=60)
CTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCG < SRR4302540.434388/94‑1 (MQ=60)
CTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCG < SRR4302540.1140209/94‑1 (MQ=60)
TGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAAC‑‑AAAACGGTTGCGCTGTTTTGCGG > SRR4302540.4534549/1‑94 (MQ=60)
GCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCG > SRR4302540.6819677/1‑94 (MQ=60)
CACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGGT > SRR4302540.9203700/1‑94 (MQ=60)
CACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGGT > SRR4302540.6188454/1‑94 (MQ=60)
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CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGGT > NC_000913/1458689‑1458875
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
