Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,458,782 |
T→C |
A96A (GCT→GCC) |
b1396 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,458,782 | 0 | T | C | 100.0%
| 843.9
/ NA
| 256 | A96A (GCT→GCC) | b1396 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/131); total (125/131) |
Only 100 of 263 total aligned reads displayed.
CGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTC > NC_000913/1458692‑1458870
|
cGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCAc < 2:4784732/93‑1 (MQ=255)
cGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCAc < 2:114855/93‑1 (MQ=255)
gCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACt > 2:5606102/1‑93 (MQ=255)
gCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACt > 2:444404/1‑93 (MQ=255)
ccTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTg < 1:5195566/93‑1 (MQ=255)
ccTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTg > 2:2111002/1‑93 (MQ=255)
cTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTgc > 1:5694400/1‑93 (MQ=255)
cTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTgc > 1:5549013/1‑93 (MQ=255)
tGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTgcg > 1:4039122/1‑93 (MQ=255)
tGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTgcg < 2:3506701/93‑1 (MQ=255)
tGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTCCCACTgcg > 2:1768200/1‑93 (MQ=255)
cAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCa < 1:6036672/93‑1 (MQ=255)
cAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCa < 1:2761890/93‑1 (MQ=255)
cAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCa < 2:3157291/93‑1 (MQ=255)
aaTAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAg < 2:1706650/93‑1 (MQ=255)
aTAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAgg > 1:4933155/1‑93 (MQ=255)
aTAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAgg < 1:1495497/93‑1 (MQ=255)
tAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGt > 2:840916/1‑93 (MQ=255)
tAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGt < 1:3844831/93‑1 (MQ=255)
aGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTa < 1:2057790/93‑1 (MQ=255)
cAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGt > 2:4917049/1‑93 (MQ=255)
aGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtc > 2:5772192/1‑93 (MQ=255)
aGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtc > 2:2261005/1‑93 (MQ=255)
aGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtc > 1:83551/1‑93 (MQ=255)
ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtca < 1:5752036/93‑1 (MQ=255)
ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtca < 2:5430779/93‑1 (MQ=255)
ggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatc < 2:3555587/93‑1 (MQ=255)
gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatca < 2:1612798/93‑1 (MQ=255)
cTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAg < 1:2620561/93‑1 (MQ=255)
tGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAgg < 2:3986302/93‑1 (MQ=255)
ggCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAggg < 2:4849444/93‑1 (MQ=255)
ggCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAggg > 2:2472278/1‑93 (MQ=255)
gCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaag < 1:2753493/93‑1 (MQ=255)
gCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaag < 1:991086/93‑1 (MQ=255)
gCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaag > 2:816746/1‑93 (MQ=255)
ccGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagc < 2:2764449/93‑1 (MQ=255)
cGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagca > 1:4693818/1‑93 (MQ=255)
tCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCaaa > 1:2507692/1‑93 (MQ=255)
gCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAAcc > 1:5152278/1‑93 (MQ=255)
gCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAAcc < 2:4313651/93‑1 (MQ=255)
gCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAAcc > 1:3044093/1‑93 (MQ=255)
cTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCg < 2:4279009/93‑1 (MQ=255)
ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg > 1:2604940/1‑93 (MQ=255)
ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg < 2:4210711/93‑1 (MQ=255)
ctgcctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGgtg > 1:1036368/1‑93 (MQ=255)
tgcctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGgtgt > 2:1355623/1‑93 (MQ=255)
gcctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGtt < 2:579973/93‑1 (MQ=255)
cctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGttt > 2:5598216/1‑93 (MQ=255)
ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGtttc > 1:395733/1‑92 (MQ=255)
ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGAGTTTa > 1:2865265/1‑93 (MQ=255)
tgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAc > 2:767022/1‑93 (MQ=255)
tgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAc < 2:3665240/93‑1 (MQ=255)
tgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAc > 2:5935780/1‑93 (MQ=255)
aCGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAc > 2:5351707/1‑93 (MQ=255)
gattgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAt > 1:4440792/1‑93 (MQ=255)
attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGTAAACCGGTGCTTACGACATc > 1:6304669/1‑93 (MQ=255)
attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc < 1:5319763/93‑1 (MQ=255)
tgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGa < 2:2948982/93‑1 (MQ=255)
gattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGaa < 1:6134439/93‑1 (MQ=255)
attTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGaaa < 2:129038/93‑1 (MQ=255)
ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt < 2:1962439/93‑1 (MQ=255)
tttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAtt < 2:671084/93‑1 (MQ=255)
tttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAtt > 1:3175673/1‑93 (MQ=255)
tttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACCGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGt < 2:3767868/93‑1 (MQ=255)
ttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGtt < 2:2905499/93‑1 (MQ=255)
ttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGtt < 2:5266036/93‑1 (MQ=255)
tGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTa < 2:1472504/93‑1 (MQ=255)
gcgcCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTaa < 2:2425459/93‑1 (MQ=255)
cgcccAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAAc < 2:6022474/90‑1 (MQ=255)
ccAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACcaa > 1:4796001/1‑93 (MQ=255)
cAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACcaac < 2:3071271/93‑1 (MQ=255)
ggCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACcaacaa > 2:4579976/1‑93 (MQ=255)
gCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACcaacaac > 1:5979752/1‑93 (MQ=255)
gCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACcaacaac > 1:1438647/1‑93 (MQ=255)
gCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACcaacaac < 2:2029022/93‑1 (MQ=255)
gCTTTGCCGGAGACACCTTAACGGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACcaacaac < 2:2711838/93‑1 (MQ=255)
tttGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACcaacaacaa < 2:4540231/93‑1 (MQ=255)
ccGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACaaaaaa < 1:3014047/93‑1 (MQ=255)
ccGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACaaaaaa < 1:6236372/93‑1 (MQ=255)
ccGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACaaaaaa < 2:2835683/93‑1 (MQ=255)
cGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAAc < 2:3782027/93‑1 (MQ=255)
cGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAAc > 1:3695291/1‑93 (MQ=255)
ggAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACg > 2:1816827/1‑93 (MQ=255)
ggAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACg < 1:5115699/93‑1 (MQ=255)
gagaCACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACgg > 1:1961353/1‑93 (MQ=255)
gagaCACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACgg < 2:5506167/93‑1 (MQ=255)
agaCACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGt < 2:5092702/93‑1 (MQ=255)
gaCACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGtt < 2:2347639/93‑1 (MQ=255)
acacCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTg > 2:4227015/1‑93 (MQ=255)
cacCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTgc < 2:2166459/93‑1 (MQ=255)
cacCGTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTgc < 1:1262587/93‑1 (MQ=255)
acCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAACACGGTTgcg > 1:414284/1‑93 (MQ=255)
acCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTgcg > 2:505473/1‑93 (MQ=255)
ccTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTgcgc < 1:3506167/93‑1 (MQ=255)
ccTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTgcgc < 1:1769144/93‑1 (MQ=255)
ttAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTg > 2:1588515/1‑93 (MQ=255)
aaCTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGtt > 2:6118565/1‑93 (MQ=255)
aaCTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGtt < 2:2640548/93‑1 (MQ=255)
aCTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGttt < 1:3348418/93‑1 (MQ=255)
aCTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGttt > 2:4153310/1‑93 (MQ=255)
|
CGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTC > NC_000913/1458692‑1458870
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGG > NC_000913/1458689‑1458874
|
CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGTACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCC > SRR4302533.6334293/1‑94 (MQ=60)
CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCC > SRR4302533.3165398/1‑94 (MQ=60)
CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCC > SRR4302533.4080634/1‑94 (MQ=60)
CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCC > SRR4302533.150885/1‑94 (MQ=60)
TACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGACGGAGACACCTTAACTGCCA > SRR4302533.4553602/1‑94 (MQ=60)
GCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTG < SRR4302533.6300461/94‑1 (MQ=60)
GCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTG < SRR4302533.905018/94‑1 (MQ=60)
GCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTG < SRR4302533.4311413/94‑1 (MQ=60)
CCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGC < SRR4302533.5226901/94‑1 (MQ=60)
CCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGC > SRR4302533.5582521/1‑94 (MQ=60)
CCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGC > SRR4302533.5728789/1‑94 (MQ=60)
CTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCG > SRR4302533.4688090/1‑94 (MQ=60)
CTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCG < SRR4302533.6095497/94‑1 (MQ=60)
CTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCG > SRR4302533.4063700/1‑94 (MQ=60)
CAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAG < SRR4302533.2778823/94‑1 (MQ=60)
CAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAG < SRR4302533.6073254/94‑1 (MQ=60)
CAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAG < SRR4302533.6238205/94‑1 (MQ=60)
AATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGG > SRR4302533.4963026/1‑94 (MQ=60)
ATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGT < SRR4302533.1504508/94‑1 (MQ=60)
TAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTA > SRR4302533.4883290/1‑94 (MQ=60)
TAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTA < SRR4302533.3868310/94‑1 (MQ=60)
TAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTA < SRR4302533.2667416/94‑1 (MQ=60)
AGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTAC < SRR4302533.2070480/94‑1 (MQ=60)
AGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTAC < SRR4302533.5478582/94‑1 (MQ=60)
AGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTAC > SRR4302533.3354515/1‑94 (MQ=60)
GCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACG > SRR4302533.3061658/1‑94 (MQ=60)
GCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACG > SRR4302533.2778216/1‑94 (MQ=60)
CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTC > SRR4302533.589861/1‑94 (MQ=60)
CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTC > SRR4302533.84082/1‑94 (MQ=60)
CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTC > SRR4302533.1281971/1‑94 (MQ=60)
GGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCAT < SRR4302533.5786737/94‑1 (MQ=60)
GGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATC > SRR4302533.1273431/1‑94 (MQ=60)
GGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATC > SRR4302533.6038453/1‑94 (MQ=60)
GGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCA < SRR4302533.1914475/94‑1 (MQ=60)
CTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGG < SRR4302533.2636646/94‑1 (MQ=60)
TGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGG > SRR4302533.4109907/1‑94 (MQ=60)
TGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGG < SRR4302533.158757/94‑1 (MQ=60)
GCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCA < SRR4302533.6034737/94‑1 (MQ=60)
AGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAG > SRR4302533.1970910/1‑94 (MQ=60)
AGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAG > SRR4302533.1546972/1‑94 (MQ=60)
GCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGC < SRR4302533.996882/94‑1 (MQ=60)
GCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGC < SRR4302533.315880/94‑1 (MQ=60)
GCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGC < SRR4302533.2770379/94‑1 (MQ=60)
CCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCA > SRR4302533.4722262/1‑94 (MQ=60)
GTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCGAGCAAA > SRR4302533.3072911/1‑94 (MQ=60)
GTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAA > SRR4302533.5726936/1‑94 (MQ=60)
GTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAA > SRR4302533.1986250/1‑94 (MQ=60)
GTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAA > SRR4302533.2523147/1‑94 (MQ=60)
CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC > SRR4302533.3062727/1‑94 (MQ=60)
CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC > SRR4302533.5183402/1‑94 (MQ=60)
CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC > SRR4302533.5183401/1‑94 (MQ=60)
CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC < SRR4302533.4797132/94‑1 (MQ=60)
CTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGG > SRR4302533.3445292/1‑94 (MQ=60)
CTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGG > SRR4302533.2620942/1‑94 (MQ=60)
CTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGG > SRR4302533.4825417/1‑94 (MQ=60)
TCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTG > SRR4302533.1042460/1‑94 (MQ=60)
TGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTT > SRR4302533.5221260/1‑94 (MQ=60)
TGCCTGCACGATTGATTTTTTGAGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTT > SRR4302533.5686096/1‑94 (MQ=60)
GCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTT > SRR4302533.5759444/1‑94 (MQ=60)
GCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTT > SRR4302533.6186593/1‑94 (MQ=60)
CCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTC > SRR4302533.398131/1‑94 (MQ=60)
CCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTA > SRR4302533.2074503/1‑94 (MQ=60)
CCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGAGTTTA > SRR4302533.2882894/1‑94 (MQ=60)
CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC < SRR4302533.5848379/94‑1 (MQ=60)
TGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACG < SRR4302533.1471503/94‑1 (MQ=60)
CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT > SRR4302533.4031040/1‑94 (MQ=60)
CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT > SRR4302533.4467641/1‑94 (MQ=60)
CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT < SRR4302533.3620280/94‑1 (MQ=60)
GATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGTAAACCGGTGCTTACGACATC > SRR4302533.6342384/1‑94 (MQ=60)
GATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATC < SRR4302533.4674008/94‑1 (MQ=60)
GATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATC < SRR4302533.2948071/94‑1 (MQ=60)
ATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCG < SRR4302533.5351646/94‑1 (MQ=60)
ATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCG > SRR4302533.3590208/1‑94 (MQ=60)
ATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCG > SRR4302533.824238/1‑94 (MQ=60)
TGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAA < SRR4302533.2536817/94‑1 (MQ=60)
GATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAA < SRR4302533.6171403/94‑1 (MQ=60)
TTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT > SRR4302533.3195209/1‑94 (MQ=60)
TTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGT > SRR4302533.5453397/1‑94 (MQ=60)
TTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTT < SRR4302533.2795905/94‑1 (MQ=60)
TGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA < SRR4302533.3820785/94‑1 (MQ=60)
CCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA < SRR4302533.3366976/94‑1 (MQ=60)
CCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA > SRR4302533.4825053/1‑94 (MQ=60)
CCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAAC > SRR4302533.2656777/1‑94 (MQ=60)
AGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAA < SRR4302533.1049155/94‑1 (MQ=60)
AGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAA < SRR4302533.5246103/94‑1 (MQ=60)
GGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCGTCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAAC < SRR4302533.2872796/94‑1 (MQ=60)
GGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAAC > SRR4302533.1447330/1‑94 (MQ=60)
GGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAAC > SRR4302533.6015970/1‑94 (MQ=60)
GGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAAC < SRR4302533.515503/94‑1 (MQ=60)
GCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACA > SRR4302533.5086301/1‑94 (MQ=60)
CTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAA > SRR4302533.3935594/1‑94 (MQ=60)
GCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAA < SRR4302533.74069/94‑1 (MQ=60)
CCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAAC < SRR4302533.3032481/94‑1 (MQ=60)
CCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAAC > SRR4302533.3717988/1‑94 (MQ=60)
CCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAAC < SRR4302533.6273716/94‑1 (MQ=60)
GGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGG < SRR4302533.5146617/94‑1 (MQ=60)
GGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGG > SRR4302533.290573/1‑94 (MQ=60)
GGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGG > SRR4302533.1973326/1‑94 (MQ=60)
GAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGT < SRR4302533.958113/94‑1 (MQ=60)
AGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTT < SRR4302533.2633010/94‑1 (MQ=60)
GACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTG > SRR4302533.3962764/1‑94 (MQ=60)
ACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGC > SRR4302533.4052344/1‑94 (MQ=60)
CACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAACACGGTTGCG > SRR4302533.416770/1‑94 (MQ=60)
CACCGTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCG < SRR4302533.1270138/94‑1 (MQ=60)
ACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGC < SRR4302533.5049766/94‑1 (MQ=60)
CCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCT < SRR4302533.3527782/94‑1 (MQ=60)
CCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCT < SRR4302533.1779916/94‑1 (MQ=60)
CTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTG > SRR4302533.4370574/1‑94 (MQ=60)
AACTGCCACTGCGCAGGTACGTCATCAGAGCAAGCAAGCCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTT < SRR4302533.2582621/94‑1 (MQ=60)
ACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTC > SRR4302533.2185039/1‑94 (MQ=60)
ACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTC < SRR4302533.3369108/94‑1 (MQ=60)
CCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGG < SRR4302533.1138847/94‑1 (MQ=60)
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CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGG > NC_000913/1458689‑1458874
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
